ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart29d05 |
|---|---|
| Clone Library Name | barley_pub |
>SNIP1_MOUSE (Q8BIZ6) Smad nuclear-interacting protein 1| Length = 383 Score = 36.2 bits (82), Expect = 0.055 Identities = 29/80 (36%), Positives = 36/80 (45%), Gaps = 12/80 (15%) Frame = +1 Query: 313 RAGTSLRALSHRSPRTRSSSLWTL---------RPHCHRR-DRPSGSSGPPAT--GHPLP 456 +AG S R S R +L T+ P HRR D P+ S PPA GH Sbjct: 2 KAGKSERERSGRRRHRSGDALTTVVVKQERLSPEPVAHRRPDAPAASLSPPAAEPGHSGH 61 Query: 457 RASGRRDPSWVSSRSPGRRT 516 R S R P+ S+S GRR+ Sbjct: 62 RGSRARSPAKKKSKSSGRRS 81
>RNF12_HUMAN (Q9NVW2) RING finger protein 12 (LIM domain-interacting RING finger| protein) (RING finger LIM domain-binding protein) (R-LIM) (NY-REN-43 antigen) Length = 624 Score = 32.7 bits (73), Expect = 0.60 Identities = 21/59 (35%), Positives = 28/59 (47%) Frame = -1 Query: 502 DSEKRPTMGHVVRMLEAEDVPSREDRRSRRGGHAGGNADAESKASSSEFEVSGDSGPSA 326 DS+ PT R +E R + RS RGG GG++ S +SSS S S S+ Sbjct: 423 DSDSEPTGSVSNRNME------RAESRSGRGGSGGGSSSGSSSSSSSSSSSSSSSSSSS 475
>RNPS1_XENLA (Q5XG24) RNA-binding protein with serine-rich domain 1| Length = 283 Score = 32.7 bits (73), Expect = 0.60 Identities = 22/74 (29%), Positives = 34/74 (45%) Frame = -1 Query: 436 REDRRSRRGGHAGGNADAESKASSSEFEVSGDSGPSARFQP*RSASTNKGVPKNSAPAEC 257 R+ + RR G +G ++ + S++SSS SG S S+ SAS+ G +S + Sbjct: 36 RDKAKKRRSGSSGSSSSSHSRSSSSSSSSSGSSSGSSSGSS-SSASSRSGSSSSSRSSSS 94 Query: 256 SRDSMMSISCRTLH 215 S S R H Sbjct: 95 SSSSGSPSPSRRRH 108
>LRC41_MOUSE (Q8K1C9) Leucine-rich repeat-containing protein 41 (Protein Muf1)| Length = 785 Score = 31.2 bits (69), Expect = 1.8 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = -1 Query: 442 PSREDRRSRRGGHAGGNADAESKASSSEFEVSGDSGPSARFQP*RSAST-NKGVPKNSA 269 P+R RRS + A G D++ ++ +E SG PSA S+ST +K P +SA Sbjct: 297 PTRVTRRSTQESLAIGGTDSKLYLPATSYEASGTKQPSAPAAASASSSTSSKRAPASSA 355
>TOPRS_HUMAN (Q9NS56) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1045 Score = 31.2 bits (69), Expect = 1.8 Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 17/111 (15%) Frame = +1 Query: 232 KCSSCYLYYTRPEPSSWGRPCSSTPIFRAGTSLRALSHRSPRTRSSSLWTLR---PHCHR 402 +CSS + + E + G SST I R+ S SPR +SS+ R P+ HR Sbjct: 531 RCSSPHSVLGKDEQINKGHCDSSTRIKSKKEEKRSTSLSSPRNLNSSVRGDRVYSPYNHR 590 Query: 403 -----RDRPSGSSGPPATGHP---------LPRASGRRDPSWVSSRSPGRR 513 R R S S +GH R +R S SSR GRR Sbjct: 591 HRKRGRSRSSDSRSQSRSGHDQKNHRKHHGKKRMKSKRSRSRESSRPRGRR 641
>CECR2_HUMAN (Q9BXF3) Cat eye syndrome critical region protein 2| Length = 1484 Score = 30.8 bits (68), Expect = 2.3 Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 11/84 (13%) Frame = +1 Query: 208 NRNAMSYRKCS---SCYLYYTRPEPSS-WGRPCSSTP----IFRAG---TSLRALSHRSP 354 N NA + R+ S S YLY T P SS G S+ P + + G T R SH P Sbjct: 1321 NHNAATKRQSSLSASEYLYGTPPPLSSGMGFGSSAFPPHSVMLQTGPPYTPQRPASHFQP 1380 Query: 355 RTRSSSLWTLRPHCHRRDRPSGSS 426 R SS + L PH +P+G S Sbjct: 1381 RAYSSPVAALPPHHPGATQPNGLS 1404
>RNF12_MOUSE (Q9WTV7) RING finger protein 12 (LIM domain-interacting RING finger| protein) (RING finger LIM domain-binding protein) (R-LIM) Length = 600 Score = 30.4 bits (67), Expect = 3.0 Identities = 19/59 (32%), Positives = 28/59 (47%) Frame = -1 Query: 502 DSEKRPTMGHVVRMLEAEDVPSREDRRSRRGGHAGGNADAESKASSSEFEVSGDSGPSA 326 DS+ P+ R +E R + R+ RG GGN+ S +SS SG+S S+ Sbjct: 416 DSDSEPSASVSSRNVE------RVESRNGRGSSGGGNSSGSSSSSSPSPSSSGESSESS 468
>NOLC1_RAT (P41777) Nucleolar phosphoprotein p130 (Nucleolar 130 kDa protein)| (140 kDa nucleolar phosphoprotein) (Nopp140) (Nucleolar and coiled-body phosphoprotein 1) Length = 704 Score = 30.4 bits (67), Expect = 3.0 Identities = 20/62 (32%), Positives = 32/62 (51%) Frame = -1 Query: 421 SRRGGHAGGNADAESKASSSEFEVSGDSGPSARFQP*RSASTNKGVPKNSAPAECSRDSM 242 +++ AGG++ ++S++SSSE E P A+ + A+ K P A AE S S Sbjct: 468 AKQAPRAGGDSSSDSESSSSEEEKKTPPKPPAKKKA-AGAAVPKPTPVKKAAAESSSSSS 526 Query: 241 MS 236 S Sbjct: 527 SS 528
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 30.4 bits (67), Expect = 3.0 Identities = 14/26 (53%), Positives = 15/26 (57%) Frame = +1 Query: 403 RDRPSGSSGPPATGHPLPRASGRRDP 480 R P GSS P +GHPLP AS P Sbjct: 409 RPWPGGSSPSPGSGHPLPPASPHHVP 434
>MMP21_HUMAN (Q8N119) Matrix metalloproteinase-21 precursor (EC 3.4.24.-)| (MMP-21) Length = 569 Score = 30.0 bits (66), Expect = 3.9 Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 1/33 (3%) Frame = +1 Query: 385 RPHCHRRD-RPSGSSGPPATGHPLPRASGRRDP 480 RP C D RP S PP+ P PRA RR P Sbjct: 114 RPRCGVPDMRPPPPSAPPSPPGPPPRARSRRSP 146
>TWIST_BRABE (O96642) Twist-related protein (BBtwist)| Length = 196 Score = 30.0 bits (66), Expect = 3.9 Identities = 17/63 (26%), Positives = 29/63 (46%) Frame = -1 Query: 511 VDPDSEKRPTMGHVVRMLEAEDVPSREDRRSRRGGHAGGNADAESKASSSEFEVSGDSGP 332 V PD + P H EAE+ PSR R R+ ++ +A ++ ++ G SG Sbjct: 20 VKPDPDASPLADHSSSGPEAEEDPSRSKRYERKRRYSKSSASSDDGSTGGGSVGGGKSGK 79 Query: 331 SAR 323 + + Sbjct: 80 NRK 82
>ARHGB_RAT (Q9ES67) Rho guanine nucleotide exchange factor 11 (RhoGEF glutamate| transport modulator GTRAP48) Length = 1527 Score = 29.6 bits (65), Expect = 5.1 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = +1 Query: 325 SLRALSHRSPRTRSSSLWTLRPHCHRRDRPSGSSGPPATGHPLPR 459 ++ +L+H PRTRSS +W P R +S PA + + R Sbjct: 1285 AVSSLAHLPPRTRSSGVWD-SPELDRNPAAEAASTEPAASYKVVR 1328
>MAST3_HUMAN (O60307) Microtubule-associated serine/threonine-protein kinase 3| (EC 2.7.11.1) Length = 1309 Score = 29.6 bits (65), Expect = 5.1 Identities = 27/72 (37%), Positives = 31/72 (43%) Frame = -1 Query: 469 VRMLEAEDVPSREDRRSRRGGHAGGNADAESKASSSEFEVSGDSGPSARFQP*RSASTNK 290 V LEAED S D RS R H G+ D E+ S E+ S S RF S+S Sbjct: 656 VPQLEAEDDTSYFDTRSERYRHL-GSEDDETNDEESSTEIPQFSSCSHRFSKVYSSSEFL 714 Query: 289 GVPKNSAPAECS 254 V AE S Sbjct: 715 AVQPTPTFAERS 726
>STP2_RAT (P11101) Nuclear transition protein 2 (TP-2) (TP2)| Length = 114 Score = 29.6 bits (65), Expect = 5.1 Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Frame = +1 Query: 358 TRSSSLWTLRPHCHRRDRP-SGSSGPPATGHPLPRASGRRDPSWVSSRSPGRRT 516 T+ SL T PH H RP S ++ A H S PS SS SPG T Sbjct: 3 TKMQSLPTTHPHPHSSSRPQSHTNNQCACSHHCRSCSQAGHPSSSSSPSPGPPT 56
>TOPK_BRARE (Q6DHU8) T-lymphokine-activated killer cell-originated protein| kinase homolog (EC 2.7.12.2) (PDZ-binding kinase) Length = 339 Score = 29.6 bits (65), Expect = 5.1 Identities = 10/29 (34%), Positives = 20/29 (68%) Frame = -1 Query: 514 CVDPDSEKRPTMGHVVRMLEAEDVPSRED 428 C + D +KRP+ H+V++LE+ S+++ Sbjct: 304 CTEEDPQKRPSAAHIVQVLESNSQLSKQN 332
>FREA_HUMAN (O43638) Forkhead-related transcription factor 10 (FREAC-10)| (Forkhead-like 18 protein) Length = 330 Score = 29.3 bits (64), Expect = 6.7 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 10/56 (17%) Frame = +1 Query: 370 SLWTLRPHCH----------RRDRPSGSSGPPATGHPLPRASGRRDPSWVSSRSPG 507 S WTL P CH RR R + +G T P A RR P +S+ PG Sbjct: 90 SYWTLDPDCHDMFEHGSFLRRRRRFTRQTGAEGTRGP---AKARRGPLRATSQDPG 142
>STON2_HUMAN (Q8WXE9) Stonin-2 (Stoned B)| Length = 905 Score = 29.3 bits (64), Expect = 6.7 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +1 Query: 421 SSGPPATGHPLPRASGRRDPSWVS 492 +S P GHP P + R PSWV+ Sbjct: 211 ASSPAMNGHPAPPVTSARFPSWVT 234
>SC6A3_BOVIN (P27922) Sodium-dependent dopamine transporter (DA transporter)| (DAT) Length = 693 Score = 29.3 bits (64), Expect = 6.7 Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 3/37 (8%) Frame = +1 Query: 409 RPSGSSGPPATGHPLPRASGR---RDPSWVSSRSPGR 510 R G P PL R GR R WV SR PGR Sbjct: 600 RVDSGGGAPVHAPPLARGVGRWRKRKSCWVPSRGPGR 636
>PCDA7_PANTR (Q5DRE5) Protocadherin alpha 7 precursor (PCDH-alpha7)| Length = 937 Score = 29.3 bits (64), Expect = 6.7 Identities = 24/82 (29%), Positives = 30/82 (36%), Gaps = 3/82 (3%) Frame = +1 Query: 271 PSSWGRPCSSTPIFRAGTSLRALSHRSPRTRSSSLWTLRPHCHRRDRPSGSSG---PPAT 441 PSS P P +R SLRA H S + + P + P+ SS P A Sbjct: 780 PSSTDNPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPEAG 839 Query: 442 GHPLPRASGRRDPSWVSSRSPG 507 P +G SW PG Sbjct: 840 EVSPPVGAGVNSNSWTFKYGPG 861
>PCDA7_HUMAN (Q9UN72) Protocadherin alpha 7 precursor (PCDH-alpha7)| Length = 937 Score = 29.3 bits (64), Expect = 6.7 Identities = 24/82 (29%), Positives = 30/82 (36%), Gaps = 3/82 (3%) Frame = +1 Query: 271 PSSWGRPCSSTPIFRAGTSLRALSHRSPRTRSSSLWTLRPHCHRRDRPSGSSG---PPAT 441 PSS P P +R SLRA H S + + P + P+ SS P A Sbjct: 780 PSSTDNPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPEAG 839 Query: 442 GHPLPRASGRRDPSWVSSRSPG 507 P +G SW PG Sbjct: 840 EVSPPVGAGVNSNSWTFKYGPG 861
>MMAA_RABIT (Q5MFW3) Methylmalonic aciduria type A homolog, mitochondrial| precursor Length = 413 Score = 29.3 bits (64), Expect = 6.7 Identities = 24/69 (34%), Positives = 29/69 (42%) Frame = +1 Query: 265 PEPSSWGRPCSSTPIFRAGTSLRALSHRSPRTRSSSLWTLRPHCHRRDRPSGSSGPPATG 444 P G C +T +A SL H R R+ + PH D SG+ GPP Sbjct: 347 PNTCQRGAACQTT---KATESLDVEPHSGKRVRA---FQESPHSPGADSCSGTKGPP--W 398 Query: 445 HPLPRASGR 471 P PRAS R Sbjct: 399 GPGPRASSR 407
>GCR_ONCMY (P49843) Glucocorticoid receptor (GR)| Length = 758 Score = 29.3 bits (64), Expect = 6.7 Identities = 30/91 (32%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Frame = -1 Query: 445 VPSREDRRSRRGGHAGGNADAESKASSSEFEVSGDSGPSARFQP*RSASTNKGVPKNSAP 266 +PS D +R G+A G S SSS F V G S P AR + SAS+ P Sbjct: 331 LPSVSDSWNRGNGYATG-----SGMSSSSFPV-GFSSPKARPEASGSASSAPAKPSGPTH 384 Query: 265 AECSRDSMMSISCR--TLHCGSFYIVGGRGI 179 C S + C L CGS + R + Sbjct: 385 KICLVCSDEASGCHYGVLTCGSCKVFFKRAV 415
>IF2_MYCPA (Q73VV4) Translation initiation factor IF-2| Length = 925 Score = 29.3 bits (64), Expect = 6.7 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 3/86 (3%) Frame = +1 Query: 262 RPEPSSWGRPC--SSTPIFRAGTSLRALSHRSPRTRSSSLWTLRPHCHRRDRPSGSSGPP 435 +P+P + G+P +TP R G + + + R+PR ++ + +P RP G P Sbjct: 144 QPKPPAPGQPPRPGATPGPRPGPAPKPAA-RTPRVGNNPFSSAQPVDRPIPRPVPRPGAP 202 Query: 436 ATGHPLPRAS-GRRDPSWVSSRSPGR 510 G P P AS G P PGR Sbjct: 203 RPGAPRPGASPGNMPPRPGGVGGPGR 228
>VEGFB_MOUSE (P49766) Vascular endothelial growth factor B precursor (VEGF-B)| (VEGF-related factor) (VRF) Length = 207 Score = 29.3 bits (64), Expect = 6.7 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Frame = +1 Query: 334 ALSHRSPRTRSSSLWTLRPHCHRRDRPSGSSGPPATGHPLPR--ASGRRDPSWVSSRSPG 507 A+ H P+ RS W P G+S P HP P +S R PS V++ +PG Sbjct: 139 AIPHHRPQPRSVPGWDSTP---------GASSPADIIHPTPAPGSSARLAPSAVNALTPG 189
>VPG_BYDVR (P29047) Putative genome-linked protein precursor (VPG) (17 kDa| protein) Length = 153 Score = 29.3 bits (64), Expect = 6.7 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 6/65 (9%) Frame = +1 Query: 295 SSTPIFRAGTSLRALSHRSPRTRSS-SLWTLRPHCHRRDR-----PSGSSGPPATGHPLP 456 S T + R+ S+ +LSH P+ R + SL P + + PS S+GPP Sbjct: 83 SPTTVTRSQVSVLSLSHTRPQLRPALSLLNSTPRANNQPWVATLIPSQSAGPPQRSSEPK 142 Query: 457 RASGR 471 R +GR Sbjct: 143 RLTGR 147
>NIPBL_HUMAN (Q6KC79) Nipped-B-like protein (Delangin) (SCC2 homolog)| Length = 2804 Score = 28.9 bits (63), Expect = 8.7 Identities = 14/43 (32%), Positives = 27/43 (62%) Frame = -1 Query: 394 NADAESKASSSEFEVSGDSGPSARFQP*RSASTNKGVPKNSAP 266 N+ S ASS+ + + PS+RF P +++S N+ +P+ ++P Sbjct: 131 NSMHSSPASSNYQQTTISHSPSSRFVPPQTSSGNRFMPQQNSP 173
>K0141_HUMAN (Q14154) Protein KIAA0141| Length = 515 Score = 28.9 bits (63), Expect = 8.7 Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 17/71 (23%) Frame = +1 Query: 337 LSHRSPRTRSSSLWTLRPHCHRRDRP----------------SGSSGPPATGHPLPRASG 468 L PRT SLW + P D P SG GP +G PR+ G Sbjct: 8 LGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG--PRSHG 65 Query: 469 RRDP-SWVSSR 498 +D W+SSR Sbjct: 66 WKDAFQWMSSR 76
>NPBL_MOUSE (Q6KCD5) Nipped-B-like protein (Delangin homolog) (SCC2 homolog)| Length = 2798 Score = 28.9 bits (63), Expect = 8.7 Identities = 14/43 (32%), Positives = 27/43 (62%) Frame = -1 Query: 394 NADAESKASSSEFEVSGDSGPSARFQP*RSASTNKGVPKNSAP 266 N+ S ASS+ + + PS+RF P +++S N+ +P+ ++P Sbjct: 131 NSMHSSPASSNYQQTTISHSPSSRFVPPQTSSGNRFMPQQNSP 173
>CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic subunit 9| [UDP-forming] (EC 2.4.1.12) (AtCesA-9) Length = 1088 Score = 28.9 bits (63), Expect = 8.7 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Frame = -1 Query: 388 DAESKASSSEFEVSGDSGPSARFQP*RSAST---NKGVPKNSAPAECSRDSMMSISC 227 +AE+ + +++ ++ G S P AST N GVP N PA R+S+ ISC Sbjct: 714 NAENNSETAQLKLEKKFGQS----PVLVASTLLLNGGVPSNVNPASLLRESIQVISC 766
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 28.9 bits (63), Expect = 8.7 Identities = 20/82 (24%), Positives = 35/82 (42%) Frame = +1 Query: 259 TRPEPSSWGRPCSSTPIFRAGTSLRALSHRSPRTRSSSLWTLRPHCHRRDRPSGSSGPPA 438 T P P++ P ++T T+ + +P T +S TL P P+ ++ PP Sbjct: 1594 TTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPP 1653 Query: 439 TGHPLPRASGRRDPSWVSSRSP 504 T P P + P ++ +P Sbjct: 1654 TTTPSPPTTTTPSPPITTTTTP 1675
>BCOR_MOUSE (Q8CGN4) BCoR protein (BCL-6 corepressor)| Length = 1759 Score = 28.9 bits (63), Expect = 8.7 Identities = 29/84 (34%), Positives = 35/84 (41%), Gaps = 7/84 (8%) Frame = +1 Query: 271 PSSWGRPCSSTPIFRAGTSL----RALSHRSPRTRSSSLWTLRPHCHRRDRPSGS---SG 429 PSSW P S G SL +AL P+ RSSS + SGS SG Sbjct: 506 PSSWVVPGPSPNEENNGKSLSLKNKALDWAIPQQRSSSCPRMGGTDAVVTNVSGSVSSSG 565 Query: 430 PPATGHPLPRASGRRDPSWVSSRS 501 PA+ P P A+ D + S S Sbjct: 566 RPASASPAPNANANADGTKTSRSS 589
>AX22E_PHAAU (O24543) Auxin-induced protein 22E (Indole-3-acetic acid-induced| protein ARG14) Length = 203 Score = 28.9 bits (63), Expect = 8.7 Identities = 19/64 (29%), Positives = 29/64 (45%) Frame = -1 Query: 508 DPDSEKRPTMGHVVRMLEAEDVPSREDRRSRRGGHAGGNADAESKASSSEFEVSGDSGPS 329 D EKRP G VVR P E+ R + N +++S S++ + + DS Sbjct: 23 DEPQEKRPCSGSVVRSSNKRSSPELEESRCK------SNINSDSSDSTTTSDHNEDSVQP 76 Query: 328 ARFQ 317 A+ Q Sbjct: 77 AKVQ 80
>LRC56_HUMAN (Q8IYG6) Leucine-rich repeat-containing protein 56| Length = 542 Score = 28.9 bits (63), Expect = 8.7 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 5/39 (12%) Frame = +1 Query: 412 PSGSSG----PPATGHPLPRASGRRDPSWVSS-RSPGRR 513 PSG+S P HP PR SG P W + +S GRR Sbjct: 440 PSGTSSQHLVPSPPKHPRPRDSGSSSPRWSTDLQSRGRR 478
>PCDA9_HUMAN (Q9Y5H5) Protocadherin alpha 9 precursor (PCDH-alpha9)| Length = 950 Score = 28.9 bits (63), Expect = 8.7 Identities = 26/87 (29%), Positives = 33/87 (37%), Gaps = 7/87 (8%) Frame = +1 Query: 268 EPS----SWGRPCSSTPIFRAGTSLRALSHRSPRTRSSSLWTLRPHCHRRDRPSGSSG-- 429 EPS S G+P P +R SLRA H S + + P + P+ SS Sbjct: 788 EPSASSDSTGKPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSATP 847 Query: 430 -PPATGHPLPRASGRRDPSWVSSRSPG 507 P A P +G SW PG Sbjct: 848 EPEAGEVSPPVGAGVNSNSWTFKYGPG 874
>CESA2_ARATH (O48947) Cellulose synthase A catalytic subunit 2 [UDP-forming] (EC| 2.4.1.12) (AtCesA-2) (Ath-A) Length = 1084 Score = 28.9 bits (63), Expect = 8.7 Identities = 15/55 (27%), Positives = 31/55 (56%) Frame = -1 Query: 391 ADAESKASSSEFEVSGDSGPSARFQP*RSASTNKGVPKNSAPAECSRDSMMSISC 227 ++ E ++ +++ ++ G S F + N GVP+N++PA R+++ ISC Sbjct: 709 SNVEKRSEATQLKLEKKFGQSPVFVA-SAVLQNGGVPRNASPACLLREAIQVISC 762
>VE18_NPVOP (O10277) Putative early 22.7 kDa protein| Length = 207 Score = 28.9 bits (63), Expect = 8.7 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = -3 Query: 515 VRRPGLREETHDGSRRPDARGRGCPVAGGP 426 V PG RE DG +PD G P+ GP Sbjct: 76 VNAPGQREVVFDGFAKPDDEGATVPLVVGP 105 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,882,274 Number of Sequences: 219361 Number of extensions: 1246639 Number of successful extensions: 5176 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 4773 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5153 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
