Clone Name | rbart29d05 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK103003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116G17, full insert sequence Length = 2419 Score = 117 bits (59), Expect = 4e-23 Identities = 95/107 (88%) Strand = Plus / Minus Query: 410 gcccctccggctcctccggtcctcccgcgacgggacatcctctgcctcgagcatccggac 469 |||||||||||||||||||||||| || || |||||||| ||||||||||||||||| || Sbjct: 1947 gcccctccggctcctccggtcctcacgggatgggacatcttctgcctcgagcatccgaac 1888 Query: 470 gacgtgacccatcgtgggtctcttctcggagtccgggtcgacgcacc 516 || |||||||| || ||||| ||||| ||||| ||||||||||||| Sbjct: 1887 aacatgacccatagtaggtcttttctcagagtctgggtcgacgcacc 1841
>dbj|AK073182.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033001F09, full insert sequence Length = 2373 Score = 117 bits (59), Expect = 4e-23 Identities = 95/107 (88%) Strand = Plus / Minus Query: 410 gcccctccggctcctccggtcctcccgcgacgggacatcctctgcctcgagcatccggac 469 |||||||||||||||||||||||| || || |||||||| ||||||||||||||||| || Sbjct: 1923 gcccctccggctcctccggtcctcacgggatgggacatcttctgcctcgagcatccgaac 1864 Query: 470 gacgtgacccatcgtgggtctcttctcggagtccgggtcgacgcacc 516 || |||||||| || ||||| ||||| ||||| ||||||||||||| Sbjct: 1863 aacatgacccatagtaggtcttttctcagagtctgggtcgacgcacc 1817
>emb|AJ832128.1| Zea mays partial mRNA for putative protein kinase (pk8-b gene) Length = 1552 Score = 111 bits (56), Expect = 2e-21 Identities = 86/96 (89%) Strand = Plus / Minus Query: 410 gcccctccggctcctccggtcctcccgcgacgggacatcctctgcctcgagcatccggac 469 |||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 1414 gcccctccggctccggcggtcctcccgtgacgggacatcttctgcctcgagcatccggac 1355 Query: 470 gacgtgacccatcgtgggtctcttctcggagtccgg 505 || || ||||| |||||||| ||||| |||||||| Sbjct: 1354 aacctgccccatagtgggtcttttctcagagtccgg 1319
>ref|NM_197177.1| Oryza sativa (japonica cultivar-group) putative kinase (OSJNBa0017E08.16), mRNA Length = 1563 Score = 95.6 bits (48), Expect = 1e-16 Identities = 95/110 (86%), Gaps = 3/110 (2%) Strand = Plus / Minus Query: 410 gcccctccggctcctccggtcctcc---cgcgacgggacatcctctgcctcgagcatccg 466 |||||||||||||||||||||| || || || |||||||| ||||||||||||||||| Sbjct: 1431 gcccctccggctcctccggtccacctcacgggatgggacatcttctgcctcgagcatccg 1372 Query: 467 gacgacgtgacccatcgtgggtctcttctcggagtccgggtcgacgcacc 516 || || |||||||| || ||||| ||||| ||||| ||||||||||||| Sbjct: 1371 aacaacatgacccatagtaggtcttttctcagagtctgggtcgacgcacc 1322
>emb|AJ830723.1| Zea mays pk8-b gene for putative protein kinase, exons 1-7 Length = 9397 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 430 cctcccgcgacgggacatcctctgcctcgagcatccggacgacgtgacccatcgtgggtc 489 ||||||| ||||||||||| |||||||||||||||||||| || || ||||| ||||||| Sbjct: 8031 cctcccgtgacgggacatcttctgcctcgagcatccggacaacctgccccatagtgggtc 7972 Query: 490 tcttctcggagtccgg 505 | ||||| |||||||| Sbjct: 7971 ttttctcagagtccgg 7956
>gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 genomic sequence, complete sequence Length = 136120 Score = 79.8 bits (40), Expect = 8e-12 Identities = 67/76 (88%) Strand = Plus / Plus Query: 441 gggacatcctctgcctcgagcatccggacgacgtgacccatcgtgggtctcttctcggag 500 |||||||| ||||||||||||||||| || || |||||||| || ||||| ||||| ||| Sbjct: 48036 gggacatcttctgcctcgagcatccgaacaacatgacccatagtaggtcttttctcagag 48095 Query: 501 tccgggtcgacgcacc 516 || ||||||||||||| Sbjct: 48096 tctgggtcgacgcacc 48111 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 410 gcccctccggctcctccggtcct 432 ||||||||||||||||||||||| Sbjct: 47916 gcccctccggctcctccggtcct 47938
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 79.8 bits (40), Expect = 8e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 441 gggacatcctctgcctcgagcatccggacgacgtgacccatcgtgggtctcttctcggag 500 |||||||| ||||||||||||||||| || || |||||||| || ||||| ||||| ||| Sbjct: 18458657 gggacatcttctgcctcgagcatccgaacaacatgacccatagtaggtcttttctcagag 18458598 Query: 501 tccgggtcgacgcacc 516 || ||||||||||||| Sbjct: 18458597 tctgggtcgacgcacc 18458582 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 410 gcccctccggctcctccggtcct 432 ||||||||||||||||||||||| Sbjct: 18458777 gcccctccggctcctccggtcct 18458755
>dbj|AB110443.1| Oryza sativa (indica cultivar-group) Rf-1 gene for fertility restorer, PPR794, PPR683, PPR762 genes for hypothetical protein, complete cds Length = 76363 Score = 79.8 bits (40), Expect = 8e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 441 gggacatcctctgcctcgagcatccggacgacgtgacccatcgtgggtctcttctcggag 500 |||||||| ||||||||||||||||| || || |||||||| || ||||| ||||| ||| Sbjct: 73704 gggacatcttctgcctcgagcatccgaacaacatgacccatagtaggtcttttctcagag 73645 Query: 501 tccgggtcgacgcacc 516 || ||||||||||||| Sbjct: 73644 tctgggtcgacgcacc 73629 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 410 gcccctccggctcctccggtcct 432 ||||||||||||||||||||||| Sbjct: 73824 gcccctccggctcctccggtcct 73802
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 79.8 bits (40), Expect = 8e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 441 gggacatcctctgcctcgagcatccggacgacgtgacccatcgtgggtctcttctcggag 500 |||||||| ||||||||||||||||| || || |||||||| || ||||| ||||| ||| Sbjct: 18468710 gggacatcttctgcctcgagcatccgaacaacatgacccatagtaggtcttttctcagag 18468651 Query: 501 tccgggtcgacgcacc 516 || ||||||||||||| Sbjct: 18468650 tctgggtcgacgcacc 18468635 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 410 gcccctccggctcctccggtcct 432 ||||||||||||||||||||||| Sbjct: 18468830 gcccctccggctcctccggtcct 18468808
>gb|BT017554.1| Zea mays clone EL01N0424F03.c mRNA sequence Length = 1149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 414 ctccggctcctccggtcctcccgcgacgggacatcctctgcctcgagcatccggacgacg 473 |||||||||| ||||||||||| || || || || ||||||||||||||||| || || Sbjct: 442 ctccggctccgacggtcctcccgtgaaggcacgtcttctgcctcgagcatccgaacaacc 383 Query: 474 tgacccatcgtgggtctcttctc 496 |||||||| ||||| || ||||| Sbjct: 382 tgacccatagtgggccttttctc 360
>emb|AJ830721.1| Zea mays mRNA for putative protein kinase (pk8-a gene) Length = 2336 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 414 ctccggctcctccggtcctcccgcgacgggacatcctctgcctcgagcatccggacgacg 473 |||||||||| ||||||||||| || || || || ||||||||||||||||| || || Sbjct: 1848 ctccggctccgacggtcctcccgtgaaggcacgtcttctgcctcgagcatccgaacaacc 1789 Query: 474 tgacccatcgtgggtctcttctc 496 |||||||| ||||| || ||||| Sbjct: 1788 tgacccatagtgggccttttctc 1766
>gb|AY112301.1| Zea mays CL9062_1 mRNA sequence Length = 640 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 414 ctccggctcctccggtcctcccgcgacgggacatcctctgcctcgagcatccg 466 |||||||||| ||||||||||| || || || || ||||||||||||||||| Sbjct: 580 ctccggctccgacggtcctcccgtgaaggcacgtcttctgcctcgagcatccg 632
>emb|AJ830722.1| Zea mays pk8-a gene for putative protein kinase, exons 1-8 Length = 5378 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Minus Query: 450 tctgcctcgagcatccggacgacgtgacccatcgtgggtctcttctc 496 ||||||||||||||||| || || |||||||| ||||| || ||||| Sbjct: 4811 tctgcctcgagcatccgaacaacctgacccatagtgggccttttctc 4765
>gb|AC122296.4| Mus musculus BAC clone RP23-265P8 from 6, complete sequence Length = 211697 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 71 aaagaaaacagaaaagaaaggaggaaa 97 ||||| ||||||||||||||||||||| Sbjct: 100409 aaagagaacagaaaagaaaggaggaaa 100383
>gb|AC121147.8| Mus musculus chromosome 3, clone RP24-369O15, complete sequence Length = 178352 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 71 aaagaaaacagaaaagaaaggaggaa 96 |||||||| ||||||||||||||||| Sbjct: 6828 aaagaaaaaagaaaagaaaggaggaa 6803
>gb|AC122334.4| Mus musculus BAC clone RP23-349H2 from chromosome 12, complete sequence Length = 212370 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 72 aagaaaacagaaaagaaaggaggaaa 97 ||||||| |||||||||||||||||| Sbjct: 3045 aagaaaagagaaaagaaaggaggaaa 3020
>gb|AC004938.3| Homo sapiens PAC clone RP5-971C3 from 7, complete sequence Length = 88029 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 71 aaagaaaacagaaaagaaaggaggaa 96 |||||||| ||||||||||||||||| Sbjct: 41518 aaagaaaagagaaaagaaaggaggaa 41493
>gb|AC112212.2| Homo sapiens chromosome 3 clone RP11-185E15, complete sequence Length = 168752 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 69 acaaagaaaacagaaaagaaaggagg 94 |||||||||| ||||||||||||||| Sbjct: 117609 acaaagaaaaaagaaaagaaaggagg 117634
>gb|AC099328.2| Homo sapiens chromosome 3 clone RP11-62G11, complete sequence Length = 156066 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 69 acaaagaaaacagaaaagaaaggagg 94 |||||||||| ||||||||||||||| Sbjct: 21826 acaaagaaaaaagaaaagaaaggagg 21851
>gb|AC158534.2| Mus musculus BAC clone RP23-32O6 from chromosome 7, complete sequence Length = 242359 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 67 agacaaagaaaacagaaaagaaagga 92 |||||||||||| ||||||||||||| Sbjct: 220792 agacaaagaaaaaagaaaagaaagga 220817
>gb|AC162378.2| Mus musculus BAC clone RP24-82K1 from chromosome 16, complete sequence Length = 210112 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Minus Query: 71 aaagaaaacagaaaagaaaggaggaaacaatctg 104 ||||| ||||||||||||| |||||| ||||||| Sbjct: 82785 aaagacaacagaaaagaaaagaggaagcaatctg 82752
>gb|AC146064.4| Pan troglodytes BAC clone RP43-59B14 from chromosome 7, complete sequence Length = 186687 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 71 aaagaaaacagaaaagaaaggaggaa 96 |||||||| ||||||||||||||||| Sbjct: 77730 aaagaaaagagaaaagaaaggaggaa 77755
>gb|AC005037.2| Homo sapiens BAC clone RP11-469M7 from 2, complete sequence Length = 190508 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 71 aaagaaaacagaaaagaaagga 92 |||||||||||||||||||||| Sbjct: 166310 aaagaaaacagaaaagaaagga 166289
>gb|AC127679.3| Mus musculus chromosome UL clone RP24-395N24, complete sequence Length = 162081 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 75 aaaacagaaaagaaaggaggaa 96 |||||||||||||||||||||| Sbjct: 70227 aaaacagaaaagaaaggaggaa 70206
>gb|AC098617.5| Homo sapiens BAC clone RP11-56I1 from 2, complete sequence Length = 142812 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 71 aaagaaaacagaaaagaaaggaggaa 96 |||||||| ||||||||||||||||| Sbjct: 59070 aaagaaaaaagaaaagaaaggaggaa 59045
>emb|BX649629.4| Mouse DNA sequence from clone RP23-324N7 on chromosome X, complete sequence Length = 78934 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 75 aaaacagaaaagaaaggaggaa 96 |||||||||||||||||||||| Sbjct: 61756 aaaacagaaaagaaaggaggaa 61735
>gb|AC155260.2| Mus musculus BAC clone RP24-71G3 from 12, complete sequence Length = 190003 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 72 aagaaaacagaaaagaaaggaggaaa 97 ||||||| |||||||||||||||||| Sbjct: 74195 aagaaaagagaaaagaaaggaggaaa 74220
>gb|AY112258.1| Zea mays CL28893_1 mRNA sequence Length = 639 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 459 agcatccggacgacgtgacccatcgtgggtctcttctc 496 ||||||||||| || ||||||||| | ||||||||||| Sbjct: 408 agcatccggacaacttgacccatcttcggtctcttctc 445
>gb|AC132105.3| Mus musculus BAC clone RP24-224B9 from 16, complete sequence Length = 160757 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 71 aaagaaaacagaaaagaaaggaggaaacaatctg 104 ||||| ||||||||||||| |||||| ||||||| Sbjct: 52470 aaagacaacagaaaagaaaagaggaagcaatctg 52503
>gb|AC140266.3| Mus musculus BAC clone RP24-300H3 from 7, complete sequence Length = 168787 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 67 agacaaagaaaacagaaaagaaagga 92 |||||||||||| ||||||||||||| Sbjct: 119246 agacaaagaaaaaagaaaagaaagga 119221
>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence Length = 1653225 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 acaaagaaaacagaaaagaaa 89 ||||||||||||||||||||| Sbjct: 1447376 acaaagaaaacagaaaagaaa 1447396
>gb|AC093543.8| Trypanosoma brucei chromosome 3 clone RPCI93-5L5, complete sequence Length = 148711 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 acaaagaaaacagaaaagaaa 89 ||||||||||||||||||||| Sbjct: 21588 acaaagaaaacagaaaagaaa 21608
>gb|AC109460.3| Homo sapiens chromosome 16 clone RP11-264B17, complete sequence Length = 163424 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 aaagaaaacagaaaagaaaggagga 95 |||||||| |||||||||||||||| Sbjct: 116065 aaagaaaagagaaaagaaaggagga 116041
>gb|AC015920.14| Homo sapiens chromosome 17, clone CTD-3022L24, complete sequence Length = 150453 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 70 caaagaaaacagaaaagaaaggagg 94 ||||||||| ||||||||||||||| Sbjct: 32091 caaagaaaaaagaaaagaaaggagg 32115
>gb|AC112166.3| Homo sapiens chromosome 16 clone CTB-134H23, complete sequence Length = 131839 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 aaagaaaacagaaaagaaaggagga 95 |||||||| |||||||||||||||| Sbjct: 117211 aaagaaaagagaaaagaaaggagga 117235
>gb|AC115085.4| Homo sapiens chromosome 17, clone RP11-280F10, complete sequence Length = 163229 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 70 caaagaaaacagaaaagaaaggagg 94 ||||||||| ||||||||||||||| Sbjct: 59027 caaagaaaaaagaaaagaaaggagg 59003
>gb|AC159255.3| Mus musculus BAC clone RP24-89C11 from chromosome 3, complete sequence Length = 216011 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 aagaaaacagaaaagaaagga 92 ||||||||||||||||||||| Sbjct: 127199 aagaaaacagaaaagaaagga 127219
>gb|AC010198.8| Homo sapiens 12p11-37.2-54.4 BAC RP11-77I22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 199070 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 atgcaatgtcctacaggaaat 235 ||||||||||||||||||||| Sbjct: 153884 atgcaatgtcctacaggaaat 153864
>gb|AC099642.4| Mus musculus chromosome 15, clone RP24-346F18, complete sequence Length = 138009 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 agacaaagaaaacagaaaaga 87 ||||||||||||||||||||| Sbjct: 28879 agacaaagaaaacagaaaaga 28899
>gb|AC163735.5| Pan troglodytes BAC clone CH251-576O12 from chromosome unknown, complete sequence Length = 214676 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 aagaaaacagaaaagaaagga 92 ||||||||||||||||||||| Sbjct: 191356 aagaaaacagaaaagaaagga 191376
>gb|AC161625.5| Pan troglodytes BAC clone CH251-98N20 from chromosome unknown, complete sequence Length = 179977 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 aagaaaacagaaaagaaagga 92 ||||||||||||||||||||| Sbjct: 98558 aagaaaacagaaaagaaagga 98538
>gb|AC009158.7| Homo sapiens chromosome 16 clone RP11-67I10, complete sequence Length = 161248 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 aagaaaacagaaaagaaagga 92 ||||||||||||||||||||| Sbjct: 152553 aagaaaacagaaaagaaagga 152533
>ref|XM_222529.2| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 4921537P18 (LOC288959), mRNA Length = 1089 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 agacaaagaaaacagaaaaga 87 ||||||||||||||||||||| Sbjct: 721 agacaaagaaaacagaaaaga 741
>emb|AL669920.15| Mouse DNA sequence from clone RP23-263C23 on chromosome 11, complete sequence Length = 216776 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 aaagaaaacagaaaagaaaggagga 95 |||||||| |||||||||||||||| Sbjct: 110325 aaagaaaaaagaaaagaaaggagga 110349
>dbj|AP006424.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT13E04, TM0314, complete sequence Length = 126349 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 aaaacagaaaagaaaggagga 95 ||||||||||||||||||||| Sbjct: 42525 aaaacagaaaagaaaggagga 42505
>emb|AL671759.10| Mouse DNA sequence from clone RP23-151A15 on chromosome 4, complete sequence Length = 141790 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 aaagaaaacagaaaagaaaggagga 95 ||||||||||||||||||| ||||| Sbjct: 9127 aaagaaaacagaaaagaaaagagga 9103
>ref|XM_634267.1| Dictyostelium discoideum hypothetical protein (DDB0204989), partial mRNA Length = 3189 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 agacaaagaaaacagaaaagaaag 90 |||||||||||| ||||||||||| Sbjct: 2436 agacaaagaaaaaagaaaagaaag 2459
>gb|AC161119.3| Mus musculus BAC clone RP23-32J13 from chromosome 18, complete sequence Length = 218697 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 acaaagaaaacagaaaagaaagga 92 |||||||||| ||||||||||||| Sbjct: 136788 acaaagaaaaaagaaaagaaagga 136765
>gb|AC161192.12| Mus musculus chromosome 5, clone RP23-382I10, complete sequence Length = 214985 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 66 tagacaaagaaaacagaaaagaaaggaggaaa 97 |||| |||||||| | |||||||||||||||| Sbjct: 72738 tagaaaaagaaaaaataaaagaaaggaggaaa 72769
>ref|XM_515539.1| PREDICTED: Pan troglodytes M-phase phosphoprotein 10 (LOC459311), mRNA Length = 1841 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 caaagaaaacagaaaagaaa 89 |||||||||||||||||||| Sbjct: 1691 caaagaaaacagaaaagaaa 1710
>gb|AC166747.4| Mus musculus chromosome 5, clone RP23-316L10, complete sequence Length = 189572 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 caaagaaaacagaaaagaaa 89 |||||||||||||||||||| Sbjct: 126688 caaagaaaacagaaaagaaa 126707
>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence Length = 1618915 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 aaacagaaaagaaaggaggaaaca 99 |||||||||||||||||| ||||| Sbjct: 1607797 aaacagaaaagaaaggagaaaaca 1607774
>gb|AC084397.5| Trypanosoma brucei chromosome 6 clone RPCI93-1I18, complete sequence Length = 169543 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 aaacagaaaagaaaggaggaaaca 99 |||||||||||||||||| ||||| Sbjct: 158425 aaacagaaaagaaaggagaaaaca 158402
>gb|BC041084.1| Homo sapiens M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein), mRNA (cDNA clone IMAGE:4997590), partial cds Length = 2152 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 caaagaaaacagaaaagaaa 89 |||||||||||||||||||| Sbjct: 1984 caaagaaaacagaaaagaaa 2003
>gb|AC139847.3| Mus musculus BAC clone RP23-387P21 from chromosome 3, complete sequence Length = 203824 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gacaaagaaaacagaaaaga 87 |||||||||||||||||||| Sbjct: 44213 gacaaagaaaacagaaaaga 44194
>ref|NM_005791.1| Homo sapiens M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) (MPHOSPH10), mRNA Length = 2503 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 caaagaaaacagaaaagaaa 89 |||||||||||||||||||| Sbjct: 2334 caaagaaaacagaaaagaaa 2353
>gb|AC121852.4| Mus musculus chromosome 3 clone RP24-93P18, complete sequence Length = 206414 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaagaaaacagaaaagaaag 90 |||||||||||||||||||| Sbjct: 189491 aaagaaaacagaaaagaaag 189472
>gb|AC144633.3| Mus musculus BAC clone RP23-26J4 from chromosome 7, complete sequence Length = 223362 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaagaaaacagaaaagaaag 90 |||||||||||||||||||| Sbjct: 200648 aaagaaaacagaaaagaaag 200629
>gb|AC121842.3| Mus musculus BAC clone RP24-80L24 from chromosome 3, complete sequence Length = 173273 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaagaaaacagaaaagaaag 90 |||||||||||||||||||| Sbjct: 23841 aaagaaaacagaaaagaaag 23822
>gb|AC122482.4| Mus musculus BAC clone RP24-361E14 from chromosome 1, complete sequence Length = 149646 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 aaagaaaacagaaaagaaaggagg 94 |||||||| ||||||||||||||| Sbjct: 29806 aaagaaaagagaaaagaaaggagg 29783
>gb|AC122020.3| Mus musculus BAC clone RP24-365G17 from chromosome 1, complete sequence Length = 165592 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 gaaaacagaaaagaaaggag 93 |||||||||||||||||||| Sbjct: 38157 gaaaacagaaaagaaaggag 38138
>gb|AC122256.3| Mus musculus BAC clone RP23-178H7 from 7, complete sequence Length = 183325 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaagaaaacagaaaagaaag 90 |||||||||||||||||||| Sbjct: 21227 aaagaaaacagaaaagaaag 21208
>gb|AC112795.6| Mus musculus BAC clone RP24-374E8 from 14, complete sequence Length = 160863 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 gaaaacagaaaagaaaggaggaaa 97 ||||| |||||||||||||||||| Sbjct: 3496 gaaaagagaaaagaaaggaggaaa 3519
>ref|XM_844258.1| PREDICTED: Canis familiaris similar to M-phase phosphoprotein 10 (LOC612775), mRNA Length = 2110 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 caaagaaaacagaaaagaaa 89 |||||||||||||||||||| Sbjct: 1967 caaagaaaacagaaaagaaa 1986
>emb|CR657640.2|CNS0F6EM Tetraodon nigroviridis full-length cDNA Length = 1076 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 cgcccctccggctcctccgg 428 |||||||||||||||||||| Sbjct: 758 cgcccctccggctcctccgg 739
>gb|AC166755.2| Mus musculus BAC clone RP24-220N14 from chromosome 9, complete sequence Length = 173308 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 agacaaagaaaacagaaaag 86 |||||||||||||||||||| Sbjct: 89746 agacaaagaaaacagaaaag 89765
>gb|BC100114.1| Danio rerio cDNA clone IMAGE:7174464, partial cds Length = 3476 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cgcttatttattgttcaaag 57 |||||||||||||||||||| Sbjct: 2288 cgcttatttattgttcaaag 2269
>emb|AL591668.10| Human DNA sequence from clone RP13-546E3 on chromosome X Contains the 5' end of the PHF6 gene for PHD finger protein 6 and a CpG island, complete sequence Length = 119130 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 aaagaaaacagaaaagaaaggagg 94 ||||||||||||||||||| |||| Sbjct: 96551 aaagaaaacagaaaagaaacgagg 96528
>emb|AL592146.8| Human DNA sequence from clone RP11-74C13 on chromosome 1 Contains the SOX13 gene for SOX13 SRY (sex determining region Y)-box 13, two novel genes, a novel gene (FLJ10761), the 3' end of the REN gene for renin and two CpG islands, complete sequence Length = 101862 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 aaagaaaacagaaaagaaaggagg 94 |||||||| ||||||||||||||| Sbjct: 3262 aaagaaaaaagaaaagaaaggagg 3239
>gb|AE014818.1| Plasmodium falciparum 3D7 chromosome 14 section 3 of 13 of the complete sequence Length = 252632 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aaagaaaacagaaaagaaag 90 |||||||||||||||||||| Sbjct: 69539 aaagaaaacagaaaagaaag 69558
>emb|AL355615.12| Human DNA sequence from clone RP11-33E24 on chromosome 6 Contains a ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) pseudogene, two novel genes, a pseudogene similar to part of heat shock 90kD protein 1, beta (HSPCB) and a CpG island, complete sequence Length = 178362 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 agaaaacagaaaagaaagga 92 |||||||||||||||||||| Sbjct: 66419 agaaaacagaaaagaaagga 66438
>emb|AL163533.14| Human DNA sequence from clone RP11-114G1 on chromosome 13q31.3-33.1 Contains a Sp3 transcription factor (SP3) pseudogene and a novel gene, complete sequence Length = 153592 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaagaaaacagaaaagaaag 90 |||||||||||||||||||| Sbjct: 141336 aaagaaaacagaaaagaaag 141317
>emb|AL161786.12| Human DNA sequence from clone RP11-344L17 on chromosome 9 Contains the 5' end of a novel gene (MGC20553), complete sequence Length = 145676 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aaagaaaacagaaaagaaag 90 |||||||||||||||||||| Sbjct: 103536 aaagaaaacagaaaagaaag 103555
>emb|AL135787.13| Human DNA sequence from clone RP11-16L21 on chromosome 9 Contains the 3' end of a variant of the gene for KIAA1962 protein similar to zinc finger protein HIT-10, the LTB4DH gene for leukotriene B4 12-hydroxydehydrogenase (MGC34943), the gene for KIAA0563-related gene (LOC286331), the GNG10 gene for guanine nucleotide binding protein (G protein), gamma 10, a novel gene, the 3' end of a novel gene and six CpG islands, complete sequence Length = 161448 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 70 caaagaaaacagaaaagaaaggaggaaa 97 ||||||||||||||||| || ||||||| Sbjct: 126574 caaagaaaacagaaaagtaaagaggaaa 126601
>emb|AL034452.8|HS682J15 Human DNA sequence from clone RP4-682J15 on chromosome 6p11.2-12.3 Contains the 3' end of the COL21A1 gene for collagen, type XXI, alpha 1 (collagen XXI, collagen, type XX, alpha 1, COLA1L, COL20A1, DKFZp564B052), complete sequence Length = 118431 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aaagaaaacagaaaagaaag 90 |||||||||||||||||||| Sbjct: 73451 aaagaaaacagaaaagaaag 73470
>emb|X98494.1|HSMPP10 H.sapiens mRNA for M phase phosphoprotein 10 Length = 2126 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 caaagaaaacagaaaagaaa 89 |||||||||||||||||||| Sbjct: 1957 caaagaaaacagaaaagaaa 1976
>emb|AL671968.17| Mouse DNA sequence from clone RP23-191E3 on chromosome 11 Contains four novel genes, an eukaryotic translation elongation factor 2 (Eef2) pseudogene, a Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (Fau) pseudogene, the Eif4enif1 gene for eukaryotic translation initiation factor 4E nuclear import factor 1, the Drg1 gene for developmentally regulated GTP binding protein 1, the Zfp278 gene for zinc finger protein 278, the 3' end of the Limk2 gene LIM motif-containing protein kinase 2 and five CpG islands, complete sequence Length = 214546 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 acaaagaaaacagaaaagaa 88 |||||||||||||||||||| Sbjct: 88561 acaaagaaaacagaaaagaa 88542
>emb|AL096788.1|SPBC582 S.pombe chromosome II cosmid c582 Length = 27999 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 cttatttattgttcaaagagatat 63 |||||||||||||||||| ||||| Sbjct: 12489 cttatttattgttcaaagggatat 12466
>emb|AL589871.13| Mouse DNA sequence from clone RP23-391I11 on chromosome 13 Contains the 5' end of the gene for a novel serine (or cysteine) proteinase inhibitor clade B (Serpinb) or serine protease inhibitor (Spi) family member, the Spi12 and Spi6 genes for serine protease inhibitors 12 and 6, the the genes for serine (or cysteine) proteinase inhibitor clade B member 9b (Serpinb9b) and clade B (ovalbumin) member 1b (Serpinb1b), a serine protease inhibitor (Spi) pseudogene and a prohibitin (Phb) pseudogene, complete sequence Length = 217643 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 atataaaatgaaccgcaatgcaat 221 ||||||||||||||| |||||||| Sbjct: 104537 atataaaatgaaccggaatgcaat 104560
>gb|AC158355.2| Mus musculus BAC clone RP24-374N16 from chromosome 9, complete sequence Length = 172612 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 caaagaaaacagaaaagaaa 89 |||||||||||||||||||| Sbjct: 165492 caaagaaaacagaaaagaaa 165473
>gb|AC011353.5| Homo sapiens chromosome 5 clone CTC-328A6, complete sequence Length = 143527 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 acaatcttaataccctaaaa 26 |||||||||||||||||||| Sbjct: 42038 acaatcttaataccctaaaa 42057
>emb|CR380839.1|PTB083D21 Pan troglodytes chromosome X BAC PTB-083D21, complete sequence Length = 186291 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 aaagaaaacagaaaagaaaggagg 94 ||||||||||||||||||| |||| Sbjct: 163030 aaagaaaacagaaaagaaacgagg 163053
>gb|AC115458.5| Rattus norvegicus 13 BAC CH230-190J23 (Children's Hospital Oakland Research Institute) complete sequence Length = 69404 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 acaaagaaaacagaaaagaaagga 92 ||||||||||| |||||||||||| Sbjct: 28948 acaaagaaaacggaaaagaaagga 28925
>emb|CR590410.1| full-length cDNA clone CS0DI023YF24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1017 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 caaagaaaacagaaaagaaa 89 |||||||||||||||||||| Sbjct: 867 caaagaaaacagaaaagaaa 886
>gb|AF438327.1| Homo sapiens alpha 1 type XXI collagen precursor (COL21A1) gene, complete cds, alternatively spliced Length = 381696 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaagaaaacagaaaagaaag 90 |||||||||||||||||||| Sbjct: 372715 aaagaaaacagaaaagaaag 372696
>gb|AC046144.15| Homo sapiens 3 BAC RP11-628J14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188840 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 caaagaaaacagaaaagaaa 89 |||||||||||||||||||| Sbjct: 110712 caaagaaaacagaaaagaaa 110731
>gb|AC084298.5| Homo sapiens BAC clone RP11-313B13 from 4, complete sequence Length = 26445 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 aaacagaaaagaaaggagga 95 |||||||||||||||||||| Sbjct: 19961 aaacagaaaagaaaggagga 19942
>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome Length = 2839318 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 aagaaaacagaaaagaaagg 91 |||||||||||||||||||| Sbjct: 801419 aagaaaacagaaaagaaagg 801400
>gb|AC160534.5| Mus musculus chromosome 7, clone RP24-265E12, complete sequence Length = 176921 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaagaaaacagaaaagaaag 90 |||||||||||||||||||| Sbjct: 78522 aaagaaaacagaaaagaaag 78503
>gb|AC023425.20| Homo sapiens 12 BAC RP11-350G2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181829 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 aaagaaaacagaaaagaaaggagg 94 |||||||| ||||||||||||||| Sbjct: 166975 aaagaaaaaagaaaagaaaggagg 166998
>emb|BX936387.9| Zebrafish DNA sequence from clone CH211-245M11 in linkage group 18, complete sequence Length = 71220 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 31 cttaatacgcttatttattgttcaaaga 58 |||||| | ||||||||||||||||||| Sbjct: 8417 cttaattcacttatttattgttcaaaga 8390
>ref|NM_001021081.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC582.05c), partial mRNA Length = 2637 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 cttatttattgttcaaagagatat 63 |||||||||||||||||| ||||| Sbjct: 317 cttatttattgttcaaagggatat 340
>gb|AC102298.14| Mus musculus chromosome 7, clone RP24-396N13, complete sequence Length = 187811 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aaagaaaacagaaaagaaag 90 |||||||||||||||||||| Sbjct: 71551 aaagaaaacagaaaagaaag 71570
>gb|AC007881.4| Homo sapiens BAC clone RP11-467P9 from 2, complete sequence Length = 171247 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 caaagaaaacagaaaagaaa 89 |||||||||||||||||||| Sbjct: 116652 caaagaaaacagaaaagaaa 116671
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 gcccttgttcgtcgacgccg 306 |||||||||||||||||||| Sbjct: 5654180 gcccttgttcgtcgacgccg 5654161
>gb|AC171016.2| Gallus gallus BAC clone CH261-29C12 from chromosome ul, complete sequence Length = 168140 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aaagaaaacagaaaagaaag 90 |||||||||||||||||||| Sbjct: 1571 aaagaaaacagaaaagaaag 1590
>gb|AC107977.13| Homo sapiens chromosome 15, clone CTD-2611K5, complete sequence Length = 152619 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 acaaagaaaacagaaaagaaagga 92 |||||||||| ||||||||||||| Sbjct: 108969 acaaagaaaaaagaaaagaaagga 108946
>gb|AC103719.12| Homo sapiens chromosome 8, clone RP11-421P23, complete sequence Length = 167878 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 112 tgcccaaaggaagctacagcaaag 135 |||| ||||||||||||||||||| Sbjct: 127265 tgcctaaaggaagctacagcaaag 127242
>gb|AF273333.1|AF273333 Lycopersicon esculentum clone BAC 19, complete sequence Length = 105308 Score = 40.1 bits (20), Expect = 7.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 71 aaagaaaacagaaaagaaaggaggaaacaatc 102 |||||||| ||||||||||||| ||||||||| Sbjct: 56026 aaagaaaa-agaaaagaaaggatgaaacaatc 55996
>gb|AC008526.5|AC008526 Homo sapiens chromosome 5 clone CTC-470C15, complete sequence Length = 168243 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 aaagaaaacagaaaagaaaggagg 94 ||||||||||||||||| |||||| Sbjct: 30090 aaagaaaacagaaaagagaggagg 30113
>gb|AC011449.6|AC011449 Homo sapiens chromosome 19 clone CTC-263F14, complete sequence Length = 120099 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aaagaaaacagaaaagaaag 90 |||||||||||||||||||| Sbjct: 6560 aaagaaaacagaaaagaaag 6579
>gb|AC012147.7|AC012147 Mus musculus, clone RP23-191A4, complete sequence Length = 217034 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 aagagatatcctagacaaagaaaa 78 ||||||||||||| |||||||||| Sbjct: 106003 aagagatatcctaaacaaagaaaa 105980
>dbj|BS000224.1| Pan troglodytes chromosome 22 clone:PTB-030G10, map 22, complete sequences Length = 155241 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 aaagaaaacagaaaagaaaggagg 94 |||||||| ||||||||||||||| Sbjct: 54574 aaagaaaaaagaaaagaaaggagg 54597
>dbj|BS000112.1| Pan troglodytes chromosome 22 clone:RP43-076J24, map 22, complete sequences Length = 169786 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 caaagaaaacagaaaagaaa 89 |||||||||||||||||||| Sbjct: 86326 caaagaaaacagaaaagaaa 86345
>gb|AC156934.1| Mus musculus BAC clone RP24-425B15 from 7, complete sequence Length = 123176 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaagaaaacagaaaagaaag 90 |||||||||||||||||||| Sbjct: 88889 aaagaaaacagaaaagaaag 88870
>emb|AL163246.2|HS21C046 Homo sapiens chromosome 21 segment HS21C046 Length = 340000 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 aaagaaaacagaaaagaaaggagg 94 |||||||| ||||||||||||||| Sbjct: 210524 aaagaaaaaagaaaagaaaggagg 210547
>gb|AC140288.5| Mus musculus BAC clone RP23-348K1 from 14, complete sequence Length = 250519 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 gaaaacagaaaagaaaggaggaaa 97 ||||| |||||||||||||||||| Sbjct: 167769 gaaaagagaaaagaaaggaggaaa 167792
>emb|CT009515.16| Mouse DNA sequence from clone RP23-117H6 on chromosome 14, complete sequence Length = 197196 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aaagaaaacagaaaagaaag 90 |||||||||||||||||||| Sbjct: 177000 aaagaaaacagaaaagaaag 177019
>emb|AJ242794.1|CCO242794 Coprinus comatus mRNA for putative allergen rCop c7, partial (cop c7 gene) Length = 614 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gacaaagaaaacagaaaaga 87 |||||||||||||||||||| Sbjct: 22 gacaaagaaaacagaaaaga 3
>emb|CT009602.4| PTB-121B21, complete sequence Length = 236109 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 aaagaaaacagaaaagaaaggagg 94 ||||||||||||||||||| |||| Sbjct: 25596 aaagaaaacagaaaagaaacgagg 25619
>dbj|AP001711.1| Homo sapiens genomic DNA, chromosome 21q, section 55/105 Length = 340000 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 caaagaaaacagaaaagaaa 89 |||||||||||||||||||| Sbjct: 89625 caaagaaaacagaaaagaaa 89644
>gb|AE000512.1| Thermotoga maritima MSB8, complete genome Length = 1860725 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 tagacaaagaaaacagaaaa 85 |||||||||||||||||||| Sbjct: 1460695 tagacaaagaaaacagaaaa 1460714
>gb|AC109203.9| Mus musculus chromosome 18, clone RP23-2B18, complete sequence Length = 216783 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 acaaagaaaacagaaaagaaagga 92 |||||||||| ||||||||||||| Sbjct: 15701 acaaagaaaaaagaaaagaaagga 15678
>emb|AL844491.14| Mouse DNA sequence from clone RP23-173A8 on chromosome 11, complete sequence Length = 180637 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 caaagaaaacagaaaagaaaggag 93 ||||||||||||||||| |||||| Sbjct: 136803 caaagaaaacagaaaaggaaggag 136780
>gb|AC132087.4| Mus musculus BAC clone RP24-407J14 from 9, complete sequence Length = 169174 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 agacaaagaaaacagaaaag 86 |||||||||||||||||||| Sbjct: 155662 agacaaagaaaacagaaaag 155681
>emb|BX855587.13| Zebrafish DNA sequence from clone DKEY-103L5 in linkage group 7, complete sequence Length = 131836 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaagaaaacagaaaagaaag 90 |||||||||||||||||||| Sbjct: 77529 aaagaaaacagaaaagaaag 77510 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaagaaaacagaaaagaaag 90 |||||||||||||||||||| Sbjct: 77398 aaagaaaacagaaaagaaag 77379
>emb|AL935278.7| Mouse DNA sequence from clone RP23-84E1 on chromosome 2, complete sequence Length = 183353 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gaggaaacaatctgtacagg 110 |||||||||||||||||||| Sbjct: 84027 gaggaaacaatctgtacagg 84008
>emb|AL807393.10| Mouse DNA sequence from clone RP23-142A9 on chromosome X, complete sequence Length = 147187 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 caaagaaaacagaaaagaaa 89 |||||||||||||||||||| Sbjct: 60896 caaagaaaacagaaaagaaa 60877
>emb|AL035610.3|HSM17648 Homo sapiens chromosome 21 PAC LLNLP704M17648Q13, complete sequence Length = 154894 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 aaagaaaacagaaaagaaaggagg 94 |||||||| ||||||||||||||| Sbjct: 59212 aaagaaaaaagaaaagaaaggagg 59235
>dbj|AP000563.1| Homo sapiens genomic DNA, chromosome 21q22.1, clone:PQ8P9, D21S226-AML region, complete sequence Length = 68581 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 caaagaaaacagaaaagaaa 89 |||||||||||||||||||| Sbjct: 10935 caaagaaaacagaaaagaaa 10954
>dbj|AP000211.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone f43D11-119B8, segment 9/12, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 caaagaaaacagaaaagaaa 89 |||||||||||||||||||| Sbjct: 2613 caaagaaaacagaaaagaaa 2632 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,425,176 Number of Sequences: 3902068 Number of extensions: 4425176 Number of successful extensions: 176646 Number of sequences better than 10.0: 121 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 176262 Number of HSP's gapped (non-prelim): 384 length of query: 517 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 494 effective length of database: 17,143,297,704 effective search space: 8468789065776 effective search space used: 8468789065776 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)