Clone Name | rbart29d04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | MEF2_DROME (P40791) Myocyte-specific enhancer factor 2 (MADS dom... | 31 | 2.2 | 2 | TRPD_BUCAP (P42392) Anthranilate phosphoribosyltransferase (EC 2... | 31 | 2.2 | 3 | YCF2_MARPO (P09975) Protein ycf2 | 29 | 6.3 | 4 | UBP16_HUMAN (Q9Y5T5) Ubiquitin carboxyl-terminal hydrolase 16 (E... | 29 | 8.2 |
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>MEF2_DROME (P40791) Myocyte-specific enhancer factor 2 (MADS domain| transcription factor D-mef2) Length = 539 Score = 30.8 bits (68), Expect = 2.2 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +2 Query: 5 NQRHLF*NEKNIIDKKTKSGRFSPNYRSIYTHNSKTKAIHSRHRKYDRVF 154 N+ H KNII+K+ K+G SP+ T + T +++ K D F Sbjct: 73 NEPHESLTNKNIIEKENKNGVMSPDSPEAETDYTLTPRTEAKYNKIDEEF 122
>TRPD_BUCAP (P42392) Anthranilate phosphoribosyltransferase (EC 2.4.2.18)| Length = 335 Score = 30.8 bits (68), Expect = 2.2 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +2 Query: 26 NEKNIIDKKTKSGRFSPNYRSIYTHNSKTKAI 121 N K I+DK F+P Y S++ + SKT++I Sbjct: 136 NSKKILDKLNICFLFAPKYHSVFKYASKTRSI 167
>YCF2_MARPO (P09975) Protein ycf2| Length = 2136 Score = 29.3 bits (64), Expect = 6.3 Identities = 12/39 (30%), Positives = 25/39 (64%) Frame = +2 Query: 26 NEKNIIDKKTKSGRFSPNYRSIYTHNSKTKAIHSRHRKY 142 NEK + K+ K+ +F+PN + + +NS K I+ +++ + Sbjct: 664 NEKELNKKRKKNFQFNPNIKILSFYNSSKKNIYLQNKYF 702
>UBP16_HUMAN (Q9Y5T5) Ubiquitin carboxyl-terminal hydrolase 16 (EC 3.1.2.15)| (Ubiquitin thioesterase 16) (Ubiquitin-specific-processing protease 16) (Deubiquitinating enzyme 16) (Ubiquitin-processing protease UBP-M) Length = 823 Score = 28.9 bits (63), Expect = 8.2 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -3 Query: 433 KKTRSQQDPEMARHLLDGGAADKDQRVSATVL 338 K + Q E+ R+LLDG A++ QRVS +L Sbjct: 293 KGYQQQDSQELLRYLLDGMRAEEHQRVSKGIL 324 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,296,742 Number of Sequences: 219361 Number of extensions: 1171291 Number of successful extensions: 3107 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2971 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3103 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3638905326 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)