>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                           
Query: 110     aaccaaatacattctacattggtcactt 137
               ||||||||||||||||||||||||||||
Sbjct: 2858398 aaccaaatacattctacattggtcactt 2858371

>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0085L11
          Length = 148142

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                          
Query: 110    aaccaaatacattctacattggtcactt 137
              ||||||||||||||||||||||||||||
Sbjct: 101879 aaccaaatacattctacattggtcactt 101852

>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0046E09
          Length = 146776

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                         
Query: 110   aaccaaatacattctacattggtcactt 137
             ||||||||||||||||||||||||||||
Sbjct: 18544 aaccaaatacattctacattggtcactt 18517

>dbj|AK099462.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023F20, full
            insert sequence
          Length = 1616

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                        
Query: 110  aaccaaatacattctacattggtcactt 137
            ||||||||||||||||||||||||||||
Sbjct: 1463 aaccaaatacattctacattggtcactt 1436

>dbj|AK061616.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-C07, full
           insert sequence
          Length = 643

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 110 aaccaaatacattctacattggtcactt 137
           ||||||||||||||||||||||||||||
Sbjct: 509 aaccaaatacattctacattggtcactt 482

>gb|AY107886.1| Zea mays PCO083851 mRNA sequence
          Length = 862

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 54  agagatcctagtcctaaccaaaaaccactctcattaggtatgt 96
           |||||||||| |||||||||||||| | |||||| || |||||
Sbjct: 845 agagatcctaatcctaaccaaaaacaattctcatcagatatgt 803

>gb|AC149787.2| Gallus gallus BAC clone TAM31-60B9 from chromosome ul, complete
             sequence
          Length = 146640

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 152   acagcaatgtaagagacaaaccacat 177
             |||||||||||| |||||||||||||
Sbjct: 44648 acagcaatgtaaaagacaaaccacat 44623

>emb|AJ889955.1| Inocybe napipes partial 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2
           and partial 25S rRNA gene, specimen voucher MC01-516
          Length = 748

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 268 actgcaggttgttgctgcttc 288
           |||||||||||||||||||||
Sbjct: 528 actgcaggttgttgctgcttc 548

>gb|AC150569.2| Bos taurus  BAC CH240-223K16 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 186055

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 410    agggagatgattttttcttg 429
              ||||||||||||||||||||
Sbjct: 172675 agggagatgattttttcttg 172694

>gb|AC159707.2| Mus musculus chromosome 1, clone RP24-176K12, complete sequence
          Length = 79081

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 268   actgcaggttgttgctgcttccct 291
             |||||||||| |||||||||||||
Sbjct: 15210 actgcaggttcttgctgcttccct 15187

>gb|AC156574.2| Mus musculus BAC clone RP23-54L14 from chromosome 14, complete sequence
          Length = 208155

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 403   tcaggagagggagatgattttttc 426
             |||||||||| |||||||||||||
Sbjct: 88112 tcaggagaggtagatgattttttc 88089

>emb|BX883044.1| Rattus norvegicus chromosome 20, major histocompatibility complex,
              assembled from 40 BACs, strain Brown Norway (BN/ssNHsd),
              RT1n haplotype; segment 3/11
          Length = 340493

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 42     tcggtgcacagtagagatcctagt 65
              |||||||||||||| |||||||||
Sbjct: 175415 tcggtgcacagtagtgatcctagt 175438

>gb|AC090897.4| Homo sapiens chromosome 18, clone RP11-61D1, complete sequence
          Length = 157606

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    tacattggtcacttcttgtt 143
              ||||||||||||||||||||
Sbjct: 134039 tacattggtcacttcttgtt 134020

>dbj|AK047710.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length
            enriched library, clone:C030015H17
            product:unclassifiable, full insert sequence
          Length = 1752

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 403  tcaggagagggagatgattttttc 426
            |||||||||| |||||||||||||
Sbjct: 1583 tcaggagaggtagatgattttttc 1560

>gb|AC113018.7| Mus musculus chromosome 5, clone RP23-183C18, complete sequence
          Length = 215671

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 332    cagccacctttggtttctgctccgtttt 359
              ||||||||||| ||||||||||| ||||
Sbjct: 169579 cagccacctttagtttctgctccatttt 169552

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   ttcctcttcatgtcattcga 314
             ||||||||||||||||||||
Sbjct: 95514 ttcctcttcatgtcattcga 95495

>emb|CT025564.10| Mouse DNA sequence from clone RP24-123J6 on chromosome 14, complete
             sequence
          Length = 165380

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 403   tcaggagagggagatgattttttc 426
             |||||||||| |||||||||||||
Sbjct: 77825 tcaggagaggtagatgattttttc 77802

>emb|AJ344551.2|PSA344551 Pisum sativum chloroplast mRNA for Tic62 protein
          Length = 1944

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 376  tccgttttcgccactggttt 395
            ||||||||||||||||||||
Sbjct: 1206 tccgttttcgccactggttt 1187


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,724,385
Number of Sequences: 3902068
Number of extensions: 4724385
Number of successful extensions: 82837
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82777
Number of HSP's gapped (non-prelim): 60
length of query: 448
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 426
effective length of database: 17,147,199,772
effective search space: 7304707102872
effective search space used: 7304707102872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)