ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart29c09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_469561.1| Oryza sativa (japonica cultivar-group), mRNA 88 3e-14
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 88 3e-14
3emb|Y07748.1|OSTMK O.sativa mRNA for leucine rich repeat recepto... 88 3e-14
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
5gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 geno... 88 3e-14
6dbj|AK066295.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 3e-14
7dbj|AK062249.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
8gb|AF497474.1| Aegilops tauschii leucine-rich-like protein gene,... 42 1.5
9emb|AL137244.28| Human DNA sequence from clone RP11-173B14 on ch... 42 1.5
10dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
11emb|AL713910.2|CNS07YQB Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.5
12gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
13emb|AL731742.3|CNS08C7R Oryza sativa chromosome 12, . BAC OJ1123... 42 1.5
14emb|AL831807.7|CNS08CAK Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.5
15emb|AL732647.4|CNS08C9M Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.5
16emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.5
17emb|BX664709.2|CNS09SBZ Oryza sativa chromosome 12, . BAC B1270G... 42 1.5
18gb|DP000016.1| Pan troglodytes target 1 genomic scaffold 40 6.0
19gb|BC079755.1| Xenopus laevis cDNA clone IMAGE:6951677, partial cds 40 6.0
20gb|AC002542.1| Homo sapiens BAC clone CTB-114A6 from 7, complete... 40 6.0
21emb|AL592429.6| Human DNA sequence from clone RP11-12A2 on chrom... 40 6.0
22gb|AC114699.5| Rattus norvegicus 19 BAC CH230-235A3 (Children's ... 40 6.0
23gb|AC144752.3| Pan troglodytes clone CH251-65N5, complete sequence 40 6.0
24emb|BX569692.1| Synechococcus sp. WH8102 complete genome; segmen... 40 6.0
25gb|AC146706.8| Medicago truncatula clone mth2-108g5, complete se... 40 6.0
26gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold 40 6.0
27gb|AC010128.3|AC010128 Homo sapiens BAC clone RP11-15H4 from Y, ... 40 6.0

>ref|XM_469561.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3138

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 116/140 (82%)
 Strand = Plus / Minus

                                                                        
Query: 11   cccatatagattgttatttgacagatcgaccatcttcaggtctggcaactcagcaagctc 70
            |||||| ||||||||||| |||||||| |||  | ||||  | |||||  |||||| |||
Sbjct: 1386 cccataaagattgttattcgacagatcaacctccgtcagagcaggcaaagcagcaacctc 1327

                                                                        
Query: 71   cttcggcaccgtaccagtaatgttgttgtttgaaagaattagcgtcacaagtgtggcaat 130
            |||||||||||| |||||||| ||||||| || |||||| ||| ||  |||||| | |||
Sbjct: 1326 cttcggcaccgtgccagtaatattgttgtctgcaagaataagcttctgaagtgttgtaat 1267

                                
Query: 131  cttcccgatagatggtgaga 150
            ||||||||||| ||| ||||
Sbjct: 1266 cttcccgatagctggggaga 1247



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                        
Query: 256  ctgcgagctttgccgggtacatgaacccagccgctacctccagcagcaggtctacacggg 315
            |||||||||| |||||||||  |||| ||||||| |||||||||||||||| ||||||||
Sbjct: 1141 ctgcgagcttcgccgggtactggaactcagccgccacctccagcagcaggtttacacggg 1082

                   
Query: 316  gatcaca 322
            |||||||
Sbjct: 1081 gatcaca 1075



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 116/140 (82%)
 Strand = Plus / Plus

                                                                            
Query: 11       cccatatagattgttatttgacagatcgaccatcttcaggtctggcaactcagcaagctc 70
                |||||| ||||||||||| |||||||| |||  | ||||  | |||||  |||||| |||
Sbjct: 28723722 cccataaagattgttattcgacagatcaacctccgtcagagcaggcaaagcagcaacctc 28723781

                                                                            
Query: 71       cttcggcaccgtaccagtaatgttgttgtttgaaagaattagcgtcacaagtgtggcaat 130
                |||||||||||| |||||||| ||||||| || |||||| ||| ||  |||||| | |||
Sbjct: 28723782 cttcggcaccgtgccagtaatattgttgtctgcaagaataagcttctgaagtgttgtaat 28723841

                                    
Query: 131      cttcccgatagatggtgaga 150
                ||||||||||| ||| ||||
Sbjct: 28723842 cttcccgatagctggggaga 28723861



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 61/67 (91%)
 Strand = Plus / Plus

                                                                            
Query: 256      ctgcgagctttgccgggtacatgaacccagccgctacctccagcagcaggtctacacggg 315
                |||||||||| |||||||||  |||| ||||||| |||||||||||||||| ||||||||
Sbjct: 28723967 ctgcgagcttcgccgggtactggaactcagccgccacctccagcagcaggtttacacggg 28724026

                       
Query: 316      gatcaca 322
                |||||||
Sbjct: 28724027 gatcaca 28724033



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>emb|Y07748.1|OSTMK O.sativa mRNA for leucine rich repeat receptor-like kinase
          Length = 3123

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 116/140 (82%)
 Strand = Plus / Minus

                                                                        
Query: 11   cccatatagattgttatttgacagatcgaccatcttcaggtctggcaactcagcaagctc 70
            |||||| ||||||||||| |||||||| |||  | ||||  | |||||  |||||| |||
Sbjct: 1381 cccataaagattgttattcgacagatcaacctccgtcagagcaggcaaagcagcaacctc 1322

                                                                        
Query: 71   cttcggcaccgtaccagtaatgttgttgtttgaaagaattagcgtcacaagtgtggcaat 130
            |||||||||||| |||||||| ||||||| || |||||| ||| ||  |||||| | |||
Sbjct: 1321 cttcggcaccgtgccagtaatattgttgtctgcaagaataagcttctgaagtgttgtaat 1262

                                
Query: 131  cttcccgatagatggtgaga 150
            ||||||||||| ||| ||||
Sbjct: 1261 cttcccgatagctggggaga 1242



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                        
Query: 256  ctgcgagctttgccgggtacatgaacccagccgctacctccagcagcaggtctacacggg 315
            |||||||||| |||||||||  |||||||||||| |||||||||||||||  ||||||||
Sbjct: 1136 ctgcgagcttcgccgggtactggaacccagccgccacctccagcagcaggcttacacggg 1077

                   
Query: 316  gatcaca 322
            |||||||
Sbjct: 1076 gatcaca 1070



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 116/140 (82%)
 Strand = Plus / Plus

                                                                            
Query: 11       cccatatagattgttatttgacagatcgaccatcttcaggtctggcaactcagcaagctc 70
                |||||| ||||||||||| |||||||| |||  | ||||  | |||||  |||||| |||
Sbjct: 28815046 cccataaagattgttattcgacagatcaacctccgtcagagcaggcaaagcagcaacctc 28815105

                                                                            
Query: 71       cttcggcaccgtaccagtaatgttgttgtttgaaagaattagcgtcacaagtgtggcaat 130
                |||||||||||| |||||||| ||||||| || |||||| ||| ||  |||||| | |||
Sbjct: 28815106 cttcggcaccgtgccagtaatattgttgtctgcaagaataagcttctgaagtgttgtaat 28815165

                                    
Query: 131      cttcccgatagatggtgaga 150
                ||||||||||| ||| ||||
Sbjct: 28815166 cttcccgatagctggggaga 28815185



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 61/67 (91%)
 Strand = Plus / Plus

                                                                            
Query: 256      ctgcgagctttgccgggtacatgaacccagccgctacctccagcagcaggtctacacggg 315
                |||||||||| |||||||||  |||| ||||||| |||||||||||||||| ||||||||
Sbjct: 28815291 ctgcgagcttcgccgggtactggaactcagccgccacctccagcagcaggtttacacggg 28815350

                       
Query: 316      gatcaca 322
                |||||||
Sbjct: 28815351 gatcaca 28815357



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>gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 genomic sequence, complete
             sequence
          Length = 147344

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 116/140 (82%)
 Strand = Plus / Plus

                                                                         
Query: 11    cccatatagattgttatttgacagatcgaccatcttcaggtctggcaactcagcaagctc 70
             |||||| ||||||||||| |||||||| |||  | ||||  | |||||  |||||| |||
Sbjct: 30703 cccataaagattgttattcgacagatcaacctccgtcagagcaggcaaagcagcaacctc 30762

                                                                         
Query: 71    cttcggcaccgtaccagtaatgttgttgtttgaaagaattagcgtcacaagtgtggcaat 130
             |||||||||||| |||||||| ||||||| || |||||| ||| ||  |||||| | |||
Sbjct: 30763 cttcggcaccgtgccagtaatattgttgtctgcaagaataagcttctgaagtgttgtaat 30822

                                 
Query: 131   cttcccgatagatggtgaga 150
             ||||||||||| ||| ||||
Sbjct: 30823 cttcccgatagctggggaga 30842



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 61/67 (91%)
 Strand = Plus / Plus

                                                                         
Query: 256   ctgcgagctttgccgggtacatgaacccagccgctacctccagcagcaggtctacacggg 315
             |||||||||| |||||||||  |||| ||||||| |||||||||||||||| ||||||||
Sbjct: 30948 ctgcgagcttcgccgggtactggaactcagccgccacctccagcagcaggtttacacggg 31007

                    
Query: 316   gatcaca 322
             |||||||
Sbjct: 31008 gatcaca 31014



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>dbj|AK066295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060B13, full
           insert sequence
          Length = 2957

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 116/140 (82%)
 Strand = Plus / Minus

                                                                       
Query: 11  cccatatagattgttatttgacagatcgaccatcttcaggtctggcaactcagcaagctc 70
           |||||| ||||||||||| |||||||| |||  | ||||  | |||||  |||||| |||
Sbjct: 977 cccataaagattgttattcgacagatcaacctccgtcagagcaggcaaagcagcaacctc 918

                                                                       
Query: 71  cttcggcaccgtaccagtaatgttgttgtttgaaagaattagcgtcacaagtgtggcaat 130
           |||||||||||| |||||||| ||||||| || |||||| ||| ||  |||||| | |||
Sbjct: 917 cttcggcaccgtgccagtaatattgttgtctgcaagaataagcttctgaagtgttgtaat 858

                               
Query: 131 cttcccgatagatggtgaga 150
           ||||||||||| ||| ||||
Sbjct: 857 cttcccgatagctggggaga 838



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                       
Query: 256 ctgcgagctttgccgggtacatgaacccagccgctacctccagcagcaggtctacacggg 315
           |||||||||| |||||||||  |||| ||||||| |||||||||||||||| ||||||||
Sbjct: 732 ctgcgagcttcgccgggtactggaactcagccgccacctccagcagcaggtttacacggg 673

                  
Query: 316 gatcaca 322
           |||||||
Sbjct: 672 gatcaca 666



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>dbj|AK062249.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-F10, full
           insert sequence
          Length = 1857

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                       
Query: 11  cccatatagattgttatttgacagatcgaccatcttcaggtctggcaactcagcaagctc 70
           |||||| ||||||||||| |||||||| |||  | ||||  | |||||  |||||| |||
Sbjct: 105 cccataaagattgttattcgacagatcaacctccgtcagagcaggcaaagcagcaacctc 46

                                                  
Query: 71  cttcggcaccgtaccagtaatgttgttgtttgaaagaat 109
           |||||||||||| |||||||| ||||||| || ||||||
Sbjct: 45  cttcggcaccgtgccagtaatattgttgtctgcaagaat 7



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>gb|AF497474.1| Aegilops tauschii leucine-rich-like protein gene, partial cds; seed
           globulin (Glo-2) gene, complete cds; HMW-glutenin
           (Glu-Dty) gene, Glu-Dty-T2 allele, complete cds; and
           HMW-glutenin (HMW) gene, HMW-Dtx2 allele, complete cds
          Length = 102842

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 93  ttgttgtttgaaagaattagc 113
           |||||||||||||||||||||
Sbjct: 572 ttgttgtttgaaagaattagc 592



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>emb|AL137244.28| Human DNA sequence from clone RP11-173B14 on chromosome 13 Contains 2
              novel genes, the UCHL3 gene for ubiquitin carboxyl-terminal
              esterase L3 (ubiquitin thiolesterase), the 5' end of the
              LMO7 gene for LIM domain only 7 (KIAA0858) and 2 CpG
              islands, complete sequence
          Length = 183358

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 169    atttgggaaaattcagcaatg 189
              |||||||||||||||||||||
Sbjct: 124556 atttgggaaaattcagcaatg 124576



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 93       ttgttgtttgaaagaattagc 113
                |||||||||||||||||||||
Sbjct: 23161555 ttgttgtttgaaagaattagc 23161575



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 93       ttgttgtttgaaagaattagc 113
                |||||||||||||||||||||
Sbjct: 22219643 ttgttgtttgaaagaattagc 22219663



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 93       ttgttgtttgaaagaattagc 113
                |||||||||||||||||||||
Sbjct: 21930241 ttgttgtttgaaagaattagc 21930261



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 93       ttgttgtttgaaagaattagc 113
                |||||||||||||||||||||
Sbjct: 21821462 ttgttgtttgaaagaattagc 21821482



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 93       ttgttgtttgaaagaattagc 113
                |||||||||||||||||||||
Sbjct: 13699259 ttgttgtttgaaagaattagc 13699239



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>emb|AL713910.2|CNS07YQB Oryza sativa chromosome 12, . BAC OSJNBa0042B03 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 145118

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 93    ttgttgtttgaaagaattagc 113
             |||||||||||||||||||||
Sbjct: 32860 ttgttgtttgaaagaattagc 32840



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 93       ttgttgtttgaaagaattagc 113
                |||||||||||||||||||||
Sbjct: 23089746 ttgttgtttgaaagaattagc 23089766



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 93       ttgttgtttgaaagaattagc 113
                |||||||||||||||||||||
Sbjct: 22147988 ttgttgtttgaaagaattagc 22148008



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 93       ttgttgtttgaaagaattagc 113
                |||||||||||||||||||||
Sbjct: 21858586 ttgttgtttgaaagaattagc 21858606



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 93       ttgttgtttgaaagaattagc 113
                |||||||||||||||||||||
Sbjct: 21749807 ttgttgtttgaaagaattagc 21749827



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 93       ttgttgtttgaaagaattagc 113
                |||||||||||||||||||||
Sbjct: 13653533 ttgttgtttgaaagaattagc 13653513



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>emb|AL731742.3|CNS08C7R Oryza sativa chromosome 12, . BAC OJ1123_B09 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 155585

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 93    ttgttgtttgaaagaattagc 113
             |||||||||||||||||||||
Sbjct: 33367 ttgttgtttgaaagaattagc 33347



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>emb|AL831807.7|CNS08CAK Oryza sativa chromosome 12, . BAC OSJNBa0062E22 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 138308

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 93    ttgttgtttgaaagaattagc 113
             |||||||||||||||||||||
Sbjct: 36369 ttgttgtttgaaagaattagc 36389



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>emb|AL732647.4|CNS08C9M Oryza sativa chromosome 12, . BAC OSJNBb0087J18 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 121592

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 93     ttgttgtttgaaagaattagc 113
              |||||||||||||||||||||
Sbjct: 101870 ttgttgtttgaaagaattagc 101850



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>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 135323

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 93    ttgttgtttgaaagaattagc 113
             |||||||||||||||||||||
Sbjct: 16842 ttgttgtttgaaagaattagc 16822



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>emb|BX664709.2|CNS09SBZ Oryza sativa chromosome 12, . BAC B1270G11 of chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 155451

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 93    ttgttgtttgaaagaattagc 113
             |||||||||||||||||||||
Sbjct: 14912 ttgttgtttgaaagaattagc 14892



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>gb|DP000016.1| Pan troglodytes target 1 genomic scaffold
          Length = 1623484

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 240    tttcctccccaagcagctgc 259
              ||||||||||||||||||||
Sbjct: 979428 tttcctccccaagcagctgc 979447



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>gb|BC079755.1| Xenopus laevis cDNA clone IMAGE:6951677, partial cds
          Length = 2496

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 170  tttgggaaaattcagcaatg 189
            ||||||||||||||||||||
Sbjct: 2378 tttgggaaaattcagcaatg 2359



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>gb|AC002542.1| Homo sapiens BAC clone CTB-114A6 from 7, complete sequence
          Length = 188741

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   tttcctccccaagcagctgc 259
             ||||||||||||||||||||
Sbjct: 80594 tttcctccccaagcagctgc 80613



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>emb|AL592429.6| Human DNA sequence from clone RP11-12A2 on chromosome 6 Contains a DnaJ
             (Hsp40) homolog subfamily C member 7 (DNAJC7) pseudogene,
             the CITED2 gene for Cbp/p300-interacting transactivator
             with Glu/Asp-rich carboxy-terminal domain 2 (MRG1, P35SRJ)
             and a putative novel gene. Contains two CpG islands,
             complete sequence
          Length = 167460

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 347   ttgatttttacccgacttgt 366
             ||||||||||||||||||||
Sbjct: 71193 ttgatttttacccgacttgt 71212



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>gb|AC114699.5| Rattus norvegicus 19 BAC CH230-235A3 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 224930

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 427   tcacattcttcagagacttg 446
             ||||||||||||||||||||
Sbjct: 48492 tcacattcttcagagacttg 48473



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>gb|AC144752.3| Pan troglodytes clone CH251-65N5, complete sequence
          Length = 113988

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   tttcctccccaagcagctgc 259
             ||||||||||||||||||||
Sbjct: 79681 tttcctccccaagcagctgc 79700



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>emb|BX569692.1| Synechococcus sp. WH8102 complete genome; segment 4/7
          Length = 345997

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 283    cagccgctacctccagcagc 302
              ||||||||||||||||||||
Sbjct: 207538 cagccgctacctccagcagc 207519



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>gb|AC146706.8| Medicago truncatula clone mth2-108g5, complete sequence
          Length = 106753

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 2     aggaatctccccatatagattgttatttgaca 33
             ||||||||| ||| ||||||||||||| ||||
Sbjct: 51067 aggaatctctccagatagattgttattagaca 51036



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>gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold
          Length = 1787293

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 240    tttcctccccaagcagctgc 259
              ||||||||||||||||||||
Sbjct: 898837 tttcctccccaagcagctgc 898856



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>gb|AC010128.3|AC010128 Homo sapiens BAC clone RP11-15H4 from Y, complete sequence
          Length = 62786

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 12   ccatatagattgttatttgacaga 35
            |||||||||||| |||||||||||
Sbjct: 3586 ccatatagattgatatttgacaga 3563


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,659,524
Number of Sequences: 3902068
Number of extensions: 3659524
Number of successful extensions: 86937
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86767
Number of HSP's gapped (non-prelim): 163
length of query: 446
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 424
effective length of database: 17,147,199,772
effective search space: 7270412703328
effective search space used: 7270412703328
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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