ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart29c08 |
|---|---|
| Clone Library Name | barley_pub |
>DHSB_PARDE (Q59662) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)| Length = 259 Score = 119 bits (299), Expect = 3e-27 Identities = 53/73 (72%), Positives = 59/73 (80%) Frame = -1 Query: 473 YWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLN 294 YWWN + YLGPAALLHA RWI DSRDE T ERLDS+ D FKLYRCHTI NCT+ CPKGLN Sbjct: 183 YWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDSLEDPFKLYRCHTIMNCTNTCPKGLN 242 Query: 293 PAKQIDTIKKLQL 255 PAK I +IK + + Sbjct: 243 PAKAIASIKHMMV 255
>DHSB_RICCN (Q92JJ8) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)| Length = 261 Score = 111 bits (277), Expect = 1e-24 Identities = 49/71 (69%), Positives = 55/71 (77%) Frame = -1 Query: 473 YWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLN 294 YWWN ++YLGPA LL A RWI DSRD+ T ERL+++ D FKLYRCHTI NCT CPKGLN Sbjct: 184 YWWNGDKYLGPAILLQAYRWIADSRDDNTGERLEALEDPFKLYRCHTIMNCTKTCPKGLN 243 Query: 293 PAKQIDTIKKL 261 PAK I IK L Sbjct: 244 PAKAIGKIKSL 254
>DHSB_HUMAN (P21912) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (Ip) (Iron-sulfur subunit of complex II) Length = 280 Score = 109 bits (272), Expect = 4e-24 Identities = 46/71 (64%), Positives = 54/71 (76%) Frame = -1 Query: 473 YWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLN 294 YWWN ++YLGPA L+ A RW+ DSRD+FT+ERL + D F LYRCHTI NCT CPKGLN Sbjct: 199 YWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLN 258 Query: 293 PAKQIDTIKKL 261 P K I IKK+ Sbjct: 259 PGKAIAEIKKM 269
>DHSB_RICPR (Q9ZEA1) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)| Length = 261 Score = 108 bits (270), Expect = 7e-24 Identities = 47/71 (66%), Positives = 54/71 (76%) Frame = -1 Query: 473 YWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLN 294 YWWN ++YLGPA LL A RWI DSRD+ T RL+++ D FKLYRCHTI NCT CPKGLN Sbjct: 184 YWWNGDKYLGPAILLQAYRWIADSRDDNTGARLEALEDPFKLYRCHTIMNCTKTCPKGLN 243 Query: 293 PAKQIDTIKKL 261 PAK I +K L Sbjct: 244 PAKAIGRVKNL 254
>DHSB_MOUSE (Q9CQA3) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (Ip) (Iron-sulfur subunit of complex II) Length = 282 Score = 108 bits (269), Expect = 9e-24 Identities = 45/71 (63%), Positives = 54/71 (76%) Frame = -1 Query: 473 YWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLN 294 YWWN ++YLGPA L+ A RW+ DSRD+FT+ERL + D F +YRCHTI NCT CPKGLN Sbjct: 201 YWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSVYRCHTIMNCTQTCPKGLN 260 Query: 293 PAKQIDTIKKL 261 P K I IKK+ Sbjct: 261 PGKAIAEIKKM 271
>DHSB_DROME (P21914) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 297 Score = 107 bits (268), Expect = 1e-23 Identities = 47/74 (63%), Positives = 54/74 (72%) Frame = -1 Query: 473 YWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLN 294 YWWN E+YLGPA L+ A RWI DSRDE + ERL+ + D F +YRCHTI NCT CPKGLN Sbjct: 208 YWWNAEKYLGPAVLMQAYRWIIDSRDENSAERLNKLKDPFSVYRCHTIMNCTRTCPKGLN 267 Query: 293 PAKQIDTIKKLQLG 252 P + I IKKL G Sbjct: 268 PGRAIAEIKKLLSG 281
>DHSB_MYCGR (O42772) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 297 Score = 105 bits (263), Expect = 5e-23 Identities = 46/70 (65%), Positives = 52/70 (74%) Frame = -1 Query: 473 YWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLN 294 YWWN EEYLGPA LL + RWI DSRDE T +R D++N+ LYRCHTI NC+ CPKGLN Sbjct: 222 YWWNSEEYLGPAVLLQSYRWINDSRDEKTAQRKDALNNSMSLYRCHTILNCSRTCPKGLN 281 Query: 293 PAKQIDTIKK 264 PA I IKK Sbjct: 282 PALAIAEIKK 291
>DHSB_RECAM (P80480) Succinate dehydrogenase [ubiquinone] iron-sulfur protein| (EC 1.3.5.1) (IP) Length = 239 Score = 104 bits (260), Expect = 1e-22 Identities = 46/70 (65%), Positives = 53/70 (75%) Frame = -1 Query: 473 YWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLN 294 YWWN ++YLGPA LL A RWI DSRD+ T+ERL + D FKLYRCHTI NCT CPK LN Sbjct: 164 YWWNSDKYLGPAVLLQAYRWIVDSRDQGTRERLQYLEDPFKLYRCHTILNCTKTCPKHLN 223 Query: 293 PAKQIDTIKK 264 PA+ I IK+ Sbjct: 224 PAQAIAKIKQ 233
>DHSB_CYACA (P48933) Succinate dehydrogenase [ubiquinone] iron-sulfur protein| (EC 1.3.5.1) (IP) Length = 262 Score = 103 bits (257), Expect = 2e-22 Identities = 49/81 (60%), Positives = 56/81 (69%) Frame = -1 Query: 473 YWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLN 294 YWWN ++YLGPA LL A RWI DSRD+ T RL S+ D +KLYRCHTI NCT CPK LN Sbjct: 177 YWWNHDKYLGPAVLLQAYRWIVDSRDDNTLSRLLSLKDSYKLYRCHTIMNCTKTCPKHLN 236 Query: 293 PAKQIDTIKKLQLGA*V*AEQ 231 P K I +IKK L V E+ Sbjct: 237 PGKVIASIKKRLLNLEVLGEK 257
>DHSB_CANGA (Q6FWS8) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 253 Score = 101 bits (251), Expect = 1e-21 Identities = 43/70 (61%), Positives = 49/70 (70%) Frame = -1 Query: 473 YWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLN 294 YWWN EEYLGPA L+ A RW+ DSRD+ TK R + + LYRCHTI NCT CPKGLN Sbjct: 179 YWWNQEEYLGPAVLMQAYRWLIDSRDQATKARRTMLQNSMSLYRCHTIMNCTRTCPKGLN 238 Query: 293 PAKQIDTIKK 264 P + I IKK Sbjct: 239 PGRSIAEIKK 248
>DHSB_USTMA (P32420) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 295 Score = 101 bits (251), Expect = 1e-21 Identities = 42/70 (60%), Positives = 50/70 (71%) Frame = -1 Query: 473 YWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLN 294 YWWN +EYLGPA L+ A RW+ DSRD+F +ER + + F LYRCHTI NC+ CPK LN Sbjct: 208 YWWNQDEYLGPAVLMQAYRWMADSRDDFGEERRQKLENTFSLYRCHTIMNCSRTCPKNLN 267 Query: 293 PAKQIDTIKK 264 P K I IKK Sbjct: 268 PGKAIAQIKK 277
>DHSB_CAEEL (Q09545) Putative succinate dehydrogenase [ubiquinone] iron-sulfur| protein, mitochondrial precursor (EC 1.3.5.1) (IP) (IP subunit of complex II) Length = 298 Score = 100 bits (250), Expect = 1e-21 Identities = 42/74 (56%), Positives = 52/74 (70%) Frame = -1 Query: 473 YWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLN 294 YWWN ++YLGPA L+ A RW+ DSRD++ ERL ++D F ++CHTI NCT CPK LN Sbjct: 213 YWWNADKYLGPAVLMQAYRWVIDSRDDYATERLHRMHDSFSAFKCHTIMNCTKTCPKHLN 272 Query: 293 PAKQIDTIKKLQLG 252 PAK I IK L G Sbjct: 273 PAKAIGEIKSLLTG 286
>DHSB_YEAST (P21801) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 266 Score = 100 bits (248), Expect = 2e-21 Identities = 43/70 (61%), Positives = 49/70 (70%) Frame = -1 Query: 473 YWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLN 294 YWWN E+YLGPA L+ A RW+ DSRD+ TK R +N+ LYRCHTI NCT CPKGLN Sbjct: 192 YWWNQEQYLGPAVLMQAYRWLIDSRDQATKTRKAMLNNSMSLYRCHTIMNCTRTCPKGLN 251 Query: 293 PAKQIDTIKK 264 P I IKK Sbjct: 252 PGLAIAEIKK 261
>DHSB_UROFA (Q70KF8) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 283 Score = 100 bits (248), Expect = 2e-21 Identities = 41/70 (58%), Positives = 51/70 (72%) Frame = -1 Query: 473 YWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLN 294 YWWN +EYLGPA L+ A RW+ DSRD + ++R + + + LYRCHTI NCT CPKGLN Sbjct: 209 YWWNQDEYLGPAVLMQAYRWMADSRDSYGEDRKEKLQNTLSLYRCHTIFNCTKTCPKGLN 268 Query: 293 PAKQIDTIKK 264 PAK I IK+ Sbjct: 269 PAKAISHIKR 278
>DHSB_SCHPO (P21911) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 252 Score = 99.0 bits (245), Expect = 6e-21 Identities = 43/75 (57%), Positives = 50/75 (66%) Frame = -1 Query: 473 YWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLN 294 YWWN EEYLGPA L+ A RWI DSRD+ T +RLD + + +YRCHTI NC CPKGLN Sbjct: 178 YWWNSEEYLGPAVLMQAYRWIIDSRDQATAKRLDVMQNSMSVYRCHTIMNCARTCPKGLN 237 Query: 293 PAKQIDTIKKLQLGA 249 P I +K L A Sbjct: 238 PGLAIAKVKALMATA 252
>DHSB_CHOCR (P48932) Succinate dehydrogenase [ubiquinone] iron-sulfur protein| (EC 1.3.5.1) (IP) Length = 250 Score = 98.2 bits (243), Expect = 9e-21 Identities = 41/69 (59%), Positives = 52/69 (75%) Frame = -1 Query: 473 YWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLN 294 YWWN ++YLGPA LL A RWI DSRD T+ RL+ +N++ +L+RCHTI NC+ CPK LN Sbjct: 176 YWWNQDKYLGPAILLQAYRWIVDSRDNSTENRLNFLNNKMRLFRCHTIMNCSKTCPKSLN 235 Query: 293 PAKQIDTIK 267 P K I +IK Sbjct: 236 PGKAIASIK 244
>DHSB_PORPU (P80477) Succinate dehydrogenase [ubiquinone] iron-sulfur protein| (EC 1.3.5.1) (IP) Length = 239 Score = 94.0 bits (232), Expect = 2e-19 Identities = 40/69 (57%), Positives = 49/69 (71%) Frame = -1 Query: 473 YWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLN 294 YWWN ++YLGPA LL A RW+ DSRD KERL + + KL++CHTI NC+ CPK LN Sbjct: 165 YWWNHDKYLGPAILLQAYRWLADSRDTNAKERLKLLGGKSKLFKCHTIMNCSRTCPKSLN 224 Query: 293 PAKQIDTIK 267 P K I +IK Sbjct: 225 PGKAIASIK 233
>DHSB_ASHGO (Q75CI4) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 261 Score = 93.6 bits (231), Expect = 2e-19 Identities = 40/70 (57%), Positives = 47/70 (67%) Frame = -1 Query: 473 YWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLN 294 YWWN E+YLGPA L+ A RW+ DSRD R + + + +YRCHTI NCT CPKGLN Sbjct: 187 YWWNNEQYLGPAVLMQAYRWMVDSRDGAGAGRREQLQNAMSVYRCHTIMNCTRTCPKGLN 246 Query: 293 PAKQIDTIKK 264 P K I IKK Sbjct: 247 PGKAIAEIKK 256
>DHSB_ECOLI (P07014) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)| Length = 238 Score = 92.8 bits (229), Expect = 4e-19 Identities = 38/73 (52%), Positives = 52/73 (71%) Frame = -1 Query: 473 YWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLN 294 +WWNP++++GPA LL A R++ DSRD T RLD ++D F ++RCH+I NC CPKGLN Sbjct: 162 FWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLN 221 Query: 293 PAKQIDTIKKLQL 255 P + I IK + L Sbjct: 222 PTRAIGHIKSMLL 234
>DHSB_SALTY (Q8ZQU2) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)| Length = 238 Score = 90.9 bits (224), Expect = 2e-18 Identities = 37/73 (50%), Positives = 52/73 (71%) Frame = -1 Query: 473 YWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLN 294 +WWNP++++GPA LL A R++ DSRD T RL+ ++D F ++RCH+I NC CPKGLN Sbjct: 162 FWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLEGMSDAFSVFRCHSIMNCVSVCPKGLN 221 Query: 293 PAKQIDTIKKLQL 255 P + I IK + L Sbjct: 222 PTRAIGHIKSMLL 234
>DHSB_COXBU (P51053) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)| Length = 235 Score = 89.4 bits (220), Expect = 4e-18 Identities = 37/69 (53%), Positives = 50/69 (72%) Frame = -1 Query: 473 YWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLN 294 YWWNP++++GPA LL + R+I DSRD KERLD++ D + ++RC TI +C CPK LN Sbjct: 156 YWWNPDKFIGPAGLLWSYRFIADSRDSKEKERLDAMKDPYSVFRCRTIMDCATVCPKNLN 215 Query: 293 PAKQIDTIK 267 PAK I I+ Sbjct: 216 PAKAIRKIR 224
>DHSB_RAT (P21913) Succinate dehydrogenase [ubiquinone] iron-sulfur protein| (EC 1.3.5.1) (Ip) (Iron-sulfur subunit of complex II) (Fragment) Length = 143 Score = 82.4 bits (202), Expect = 5e-16 Identities = 33/51 (64%), Positives = 40/51 (78%) Frame = -1 Query: 473 YWWNPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNC 321 YWWN ++YLGPA L+ A RW+ DSRD+FT+ERL + D F LYRCHTI NC Sbjct: 93 YWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNC 143
>FRDB_SHIFL (P0AC50) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)| Length = 243 Score = 53.9 bits (128), Expect = 2e-07 Identities = 25/62 (40%), Positives = 40/62 (64%) Frame = -1 Query: 464 NPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAK 285 NPE ++GPAA+ A+R+ +DSRD KER+ +N + ++ C + C+ CPK ++PA Sbjct: 164 NPE-FIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAA 222 Query: 284 QI 279 I Sbjct: 223 AI 224
>FRDB_ECOLI (P0AC47) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)| Length = 243 Score = 53.9 bits (128), Expect = 2e-07 Identities = 25/62 (40%), Positives = 40/62 (64%) Frame = -1 Query: 464 NPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAK 285 NPE ++GPAA+ A+R+ +DSRD KER+ +N + ++ C + C+ CPK ++PA Sbjct: 164 NPE-FIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAA 222 Query: 284 QI 279 I Sbjct: 223 AI 224
>FRDB_ECOL6 (P0AC48) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)| Length = 243 Score = 53.9 bits (128), Expect = 2e-07 Identities = 25/62 (40%), Positives = 40/62 (64%) Frame = -1 Query: 464 NPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAK 285 NPE ++GPAA+ A+R+ +DSRD KER+ +N + ++ C + C+ CPK ++PA Sbjct: 164 NPE-FIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAA 222 Query: 284 QI 279 I Sbjct: 223 AI 224
>FRDB_ECO57 (P0AC49) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)| Length = 243 Score = 53.9 bits (128), Expect = 2e-07 Identities = 25/62 (40%), Positives = 40/62 (64%) Frame = -1 Query: 464 NPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAK 285 NPE ++GPAA+ A+R+ +DSRD KER+ +N + ++ C + C+ CPK ++PA Sbjct: 164 NPE-FIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAA 222 Query: 284 QI 279 I Sbjct: 223 AI 224
>FRDB_PROVU (P20921) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)| Length = 244 Score = 53.9 bits (128), Expect = 2e-07 Identities = 26/62 (41%), Positives = 38/62 (61%) Frame = -1 Query: 464 NPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAK 285 NPE ++GPAA+ A R+ DSRD KER+ +N E ++ C + C+ CPK ++PA Sbjct: 165 NPE-FIGPAAITLAQRYNTDSRDHGAKERMPQLNGENGVWSCTFVGYCSEVCPKHVDPAA 223 Query: 284 QI 279 I Sbjct: 224 AI 225
>FRDB_HAEIN (P44893) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)| Length = 256 Score = 48.5 bits (114), Expect = 9e-06 Identities = 23/63 (36%), Positives = 39/63 (61%) Frame = -1 Query: 464 NPEEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAK 285 NPE +LGPAA+ A+R+ D+RD +R+ +N + ++ C + C+ CPK ++PA Sbjct: 176 NPE-FLGPAAITMAHRYNLDNRDHGKAKRMSLLNGKNGVWSCTFVGYCSEVCPKHVDPAS 234 Query: 284 QID 276 I+ Sbjct: 235 AIN 237
>FRDB_MYCTU (Q10761) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)| Length = 247 Score = 48.1 bits (113), Expect = 1e-05 Identities = 23/63 (36%), Positives = 35/63 (55%) Frame = -1 Query: 455 EYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQID 276 ++LGPAA+ R+ DSRD+ +R D + + C + C+ ACPKG++PA I Sbjct: 167 DFLGPAAIALGQRYNLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQ 226 Query: 275 TIK 267 K Sbjct: 227 RYK 229
>FRDB_WOLSU (P17596) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)| Length = 239 Score = 35.4 bits (80), Expect = 0.075 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Frame = -1 Query: 458 EEYLGPAALLHANRWIQDSRDEFTKERL-DSINDEFKLYRCHTIKNCTHACPKGLNPAKQ 282 E+++G A L R++ D DE T E + I D+ ++ C T+ C CPK L + Sbjct: 168 EDFVGAAGLNRVVRFMIDPHDERTDEDYYELIGDDDGVFGCMTLLACHDVCPKNLPLQSK 227 Query: 281 IDTIKK 264 I +++ Sbjct: 228 IAYLRR 233
>DHSB_BACSU (P08066) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)| Length = 252 Score = 35.0 bits (79), Expect = 0.099 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Frame = -1 Query: 455 EYLGPAALLHANRWIQDSRDEFTK-ERLDSINDEFKLYRCHTIKNCTHACPKGL 297 +++GPA + + K ERL+++ DE L C +NC +CPKG+ Sbjct: 172 KFMGPAPMSQVRLFNAHPTGAMNKSERLEALMDEGGLADCGNSQNCVQSCPKGI 225
>Y1067_METMP (Q6LYC4) Putative iron-sulfur protein MMP1067| Length = 494 Score = 32.3 bits (72), Expect = 0.64 Identities = 17/53 (32%), Positives = 25/53 (47%) Frame = -1 Query: 452 YLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLN 294 Y GP + R+ D +DE +E+ DE +Y C T C CPK ++ Sbjct: 155 YPGPTLMRQLARFAFDPKDEIDREK--EAFDE-NIYNCTTCGRCVEVCPKEID 204
>Y092_METJA (Q57557) Putative iron-sulfur protein MJ0092| Length = 489 Score = 31.6 bits (70), Expect = 1.1 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Frame = -1 Query: 455 EYLGPAALLHANRWIQDSRDEFTKERLDSINDEFK-LYRCHTIKNCTHACPKGLN 294 +Y GP + R+ D RDE +E I F+ +Y C T C CPK ++ Sbjct: 151 DYPGPTFMRQLARFAFDKRDEDGRE----ITAYFENIYNCTTCAKCVEVCPKEID 201
>REPA_BACSU (P13962) Protein repA| Length = 396 Score = 31.2 bits (69), Expect = 1.4 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = +3 Query: 81 KEQNLVAIIHSLHGIARRFHPLFVRVETMEQKQTKWQADYNFPTSPRGKT 230 K +N++ + LH I R++ PL +K W DYN + GKT Sbjct: 106 KPKNIIVYEYPLHEIERKYKPL--------EKLRDWDKDYNSVSKELGKT 147
>IF3I_HUMAN (Q9Y262) Eukaryotic translation initiation factor 3 subunit| 6-interacting protein Length = 564 Score = 30.4 bits (67), Expect = 2.4 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 17/74 (22%) Frame = -1 Query: 446 GPAALLHANRWIQDSRDEF-----------------TKERLDSINDEFKLYRCHTIKNCT 318 GPA L N+W+ D DEF ++E +D + K++ H++ N Sbjct: 172 GPAPLELPNQWLWDIIDEFIYQFQSFSQYRCKTAKKSEEEIDFLRSNPKIWNVHSVLNVL 231 Query: 317 HACPKGLNPAKQID 276 H+ N +Q++ Sbjct: 232 HSLVDKSNINRQLE 245
>ITPR3_HUMAN (Q14573) Inositol 1,4,5-trisphosphate receptor type 3 (Type 3| inositol 1,4,5-trisphosphate receptor) (Type 3 InsP3 receptor) (IP3 receptor isoform 3) (InsP3R3) Length = 2671 Score = 30.4 bits (67), Expect = 2.4 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +3 Query: 300 PLGAGMRAVLDGVAAVQLELVVDGVKALLCELITAVLDPPVGME 431 P+G G+ +AA Q L +G L+C+LIT+ + + E Sbjct: 1709 PIGTGLDPDWSAIAATQCRLDKEGATKLVCDLITSTKNEKIFQE 1752
>ITPR3_BOVIN (Q8WN95) Inositol 1,4,5-trisphosphate receptor type 3 (Type 3| inositol 1,4,5-trisphosphate receptor) (Type 3 InsP3 receptor) (IP3 receptor isoform 3) (InsP3R3) Length = 2664 Score = 30.4 bits (67), Expect = 2.4 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +3 Query: 300 PLGAGMRAVLDGVAAVQLELVVDGVKALLCELITAVLDPPVGME 431 P+G G+ +AA Q L +G L+C+LIT+ + + E Sbjct: 1702 PMGTGLDQDWSAIAATQCRLDKEGATKLVCDLITSTKNEKIFQE 1745
>RNS10_HORSE (Q70IB3) Ribonuclease-like protein 10 precursor (Protein Train A)| (Fragment) Length = 165 Score = 30.0 bits (66), Expect = 3.2 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Frame = -1 Query: 458 EEYLGPAALLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHAC-PKGLNPAKQ 282 E+ +G +L A+ Q +D RLD +N E H +K H C P+ ++ Sbjct: 88 EDEVGGNKMLRADALFQSDKDYL---RLDLMNRECNSLMAHKVKKRNHTCIPEYTFIHEE 144 Query: 281 IDTIK 267 +DT+K Sbjct: 145 LDTVK 149
>TRBM_CANFA (Q5W7P8) Thrombomodulin precursor (TM) (CD141 antigen)| Length = 578 Score = 30.0 bits (66), Expect = 3.2 Identities = 19/49 (38%), Positives = 25/49 (51%) Frame = +3 Query: 300 PLGAGMRAVLDGVAAVQLELVVDGVKALLCELITAVLDPPVGMEQRCGA 446 P+G VL G++ L LVV + ALLC L P +E +CGA Sbjct: 512 PVGPVHSGVLIGISIASLSLVV-ALLALLCHLRKKQGAPRAELEYKCGA 559
>TRY2_ANOGA (P35036) Trypsin-2 precursor (EC 3.4.21.4)| Length = 277 Score = 30.0 bits (66), Expect = 3.2 Identities = 18/60 (30%), Positives = 26/60 (43%) Frame = -3 Query: 357 VQAVPLPHHQELHACLPQGAEPCKADRHNKEAAARSLSVSRAGSSPVEMSESCNQPAIWF 178 VQ V LP H+E + G + N ++A S RA + P E C+ +WF Sbjct: 152 VQPVELPEHEEP---VEPGTMATVSGWGNTQSAVESSDFLRAANVPTVSHEDCSDAYMWF 208
>ITPR3_MOUSE (P70227) Inositol 1,4,5-trisphosphate receptor type 3 (Type 3| inositol 1,4,5-trisphosphate receptor) (Type 3 InsP3 receptor) (IP3 receptor isoform 3) (InsP3R3) Length = 2670 Score = 29.6 bits (65), Expect = 4.1 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +3 Query: 300 PLGAGMRAVLDGVAAVQLELVVDGVKALLCELITAVLDPPVGME 431 P G+G+ +AA Q L +G L+C+LIT+ + + E Sbjct: 1709 PTGSGLDQDWSAIAATQCRLDKEGATKLVCDLITSTKNEKIFQE 1752
>IL1A_MACMU (P48089) Interleukin-1 alpha precursor (IL-1 alpha)| (Hematopoietin-1) Length = 271 Score = 29.3 bits (64), Expect = 5.4 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = -2 Query: 169 SMVSTLTNNGWKRLAIPCRE*IIATRFCSFRAVSSLVVHHILMLMHEVI 23 S+ ++T+N + +A E II R F +S++ H I ++ HE I Sbjct: 87 SLSQSITDNNLEAIANDSEEEIIKPRSAPFSFLSNMTYHFIRIIKHEFI 135
>IL1A_MACFA (P79340) Interleukin-1 alpha precursor (IL-1 alpha)| (Hematopoietin-1) Length = 271 Score = 29.3 bits (64), Expect = 5.4 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = -2 Query: 169 SMVSTLTNNGWKRLAIPCRE*IIATRFCSFRAVSSLVVHHILMLMHEVI 23 S+ ++T+N + +A E II R F +S++ H I ++ HE I Sbjct: 87 SLSQSITDNNLEAIANDSEEEIIKPRSAPFSFLSNMTYHFIRIIKHEFI 135
>ITPR3_RAT (Q63269) Inositol 1,4,5-trisphosphate receptor type 3 (Type 3| inositol 1,4,5-trisphosphate receptor) (Type 3 InsP3 receptor) (IP3 receptor isoform 3) (InsP3R3) (IP3R-3) Length = 2670 Score = 29.3 bits (64), Expect = 5.4 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +3 Query: 300 PLGAGMRAVLDGVAAVQLELVVDGVKALLCELITAVLDPPVGME 431 P G+G+ +AA Q L +G L+C+LIT+ + + E Sbjct: 1709 PTGSGVDQDWSAIAATQCRLDKEGATKLVCDLITSTKNEKIFQE 1752
>LT02_HORVU (Q9ARD5) Low temperature-induced protein lt101.2| Length = 54 Score = 28.9 bits (63), Expect = 7.1 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +3 Query: 378 ALLCELITAVLDPPVGMEQRCGAEILFWV 464 A E+I A++ PPVG+ R G + FW+ Sbjct: 4 ATFIEVILAIILPPVGVFLRYGLAVEFWI 32
>ASHH3_ARATH (Q945S8) Histone-lysine N-methyltransferase ASHH3 (EC 2.1.1.43)| (ASH1-homolog protein 3) (Protein SET DOMAIN GROUP 7) Length = 363 Score = 28.5 bits (62), Expect = 9.2 Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 2/70 (2%) Frame = +1 Query: 208 RHLHGGRPCSAHTQAPSCSFFIVSICFAGFSPLGQACVQFLMVWQRYSLNSSLM--ESRR 381 RH+ G+ + +Q +CS + + P C + + YS S+M + Sbjct: 291 RHIDAGKSWNNLSQRDTCSRNCIGVVIRLSRPTSDRCFGLVRHFDEYSRKHSVMFEDGVT 350 Query: 382 SFVNSSRLSW 411 FV+ SR W Sbjct: 351 EFVDMSREDW 360
>HGDA_ACIFE (P11569) (R)-2-hydroxyglutaryl-CoA dehydratase alpha-subunit (EC| 4.2.1.-) Length = 476 Score = 28.5 bits (62), Expect = 9.2 Identities = 16/56 (28%), Positives = 23/56 (41%) Frame = +1 Query: 16 VYELLHA*ASKYDEPPN*IQHGKNKIW*QLFTPYTESPGVSIHYSSG*KPWSKNKP 183 VY L Y + PN + + W + + GV +HY+ KPWS P Sbjct: 369 VYNNLDELVKAYCKAPNSVSIEQGVAWREGLIRDNKVDGVLVHYNRSCKPWSGYMP 424
>SEO1_YEAST (P39709) Probable transporter SEO1| Length = 593 Score = 28.5 bits (62), Expect = 9.2 Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 5/58 (8%) Frame = +1 Query: 307 GQACVQFLMVWQ-----RYSLNSSLMESRRSFVNSSRLSWIHLLAWSSAAGPRYSSGF 465 G A L WQ R + ++ + + S +WI +L W + PRY GF Sbjct: 476 GWAMAPVLYSWQNDICRRDAQTRAITLVTMNIMAQSSTAWISVLVWKTEEAPRYLKGF 533 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,684,806 Number of Sequences: 219361 Number of extensions: 1550803 Number of successful extensions: 4635 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 4505 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4634 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
