ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart29c08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ539160.1|TAE539160 Triticum aestivum sdh2-rps14 gene Length = 3666 Score = 321 bits (162), Expect = 1e-84 Identities = 174/178 (97%) Strand = Plus / Minus Query: 243 cactcaggctccgagctgcagcttctttattgtgtcgatctgctttgcagggttcagccc 302 ||||||||||||||||||||||||||||||||||||||||||||| || |||||||| || Sbjct: 3278 cactcaggctccgagctgcagcttctttattgtgtcgatctgcttcgccgggttcagtcc 3219 Query: 303 cttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3218 cttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 3159 Query: 363 gttgatggagtcaaggcgctcctttgtgaactcatcacggctgtcttggatccacctg 420 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3158 gttgatggagtcgaggcgctcctttgtgaactcatcacggctgtcttggatccacctg 3101 Score = 107 bits (54), Expect = 3e-20 Identities = 103/120 (85%), Gaps = 7/120 (5%) Strand = Plus / Minus Query: 14 aagtttatgaattacttcatgcatgagcatcaaaatatgat-------gaaccaccaaac 66 |||||||||||||| || ||||||| |||||||| ||||| |||||||||||| Sbjct: 3509 aagtttatgaattaattgatgcatggacatcaaaagatgatcaacggagaaccaccaaac 3450 Query: 67 tagatacagcacggaaagaacaaaatctggtagcaattattcactccctacacggaatcg 126 ||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 3449 tagatacagcacgaaaagaataaaatctggtagcaattattcacgaactacacggaatcg 3390 Score = 99.6 bits (50), Expect = 8e-18 Identities = 56/58 (96%) Strand = Plus / Minus Query: 416 acctgttggcatggagcagcgctgcggggccgagatactcttctgggttccaccagta 473 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 1155 acctgttggcatggagcagcgcggcggggccgagatactcctctgggttccaccagta 1098 Score = 75.8 bits (38), Expect = 1e-10 Identities = 57/62 (91%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 162 accatggagcaaaaacaaaccaaatggcaggctgattacaactttccgacatctccacgg 221 |||| ||||| ||||||||||||||| |||||||||||||| ||||| |||||||||||| Sbjct: 3349 accacggagccaaaacaaaccaaatgccaggctgattacaattttcc-acatctccacgg 3291 Query: 222 gg 223 || Sbjct: 3290 gg 3289
>ref|XM_479819.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1154 Score = 268 bits (135), Expect = 2e-68 Identities = 207/231 (89%) Strand = Plus / Minus Query: 243 cactcaggctccgagctgcagcttctttattgtgtcgatctgctttgcagggttcagccc 302 ||||||||| ||||||| |||||||| ||||||||||| ||||| || ||||| || || Sbjct: 916 cactcaggcctcgagctggagcttcttgattgtgtcgatgtgcttcgctgggttgaggcc 857 Query: 303 cttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 362 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 856 cttggggcaggcgtgtgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 797 Query: 363 gttgatggagtcaaggcgctcctttgtgaactcatcacggctgtcttggatccacctgtt 422 ||||||||| || ||||||||||| ||||||| ||||||||||| || ||||||||||| Sbjct: 796 gttgatggaatccaggcgctccttagtgaactggtcacggctgtcctgtatccacctgtt 737 Query: 423 ggcatggagcagcgctgcggggccgagatactcttctgggttccaccagta 473 ||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 736 ggcgtggaggagcgcggcggggccgaggtactcctcggggttccaccagta 686
>ref|XM_507565.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1005_B05.29-1 mRNA Length = 1218 Score = 268 bits (135), Expect = 2e-68 Identities = 207/231 (89%) Strand = Plus / Minus Query: 243 cactcaggctccgagctgcagcttctttattgtgtcgatctgctttgcagggttcagccc 302 ||||||||| ||||||| |||||||| ||||||||||| ||||| || ||||| || || Sbjct: 915 cactcaggcctcgagctggagcttcttgattgtgtcgatgtgcttcgctgggttgaggcc 856 Query: 303 cttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 362 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 855 cttggggcaggcgtgtgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 796 Query: 363 gttgatggagtcaaggcgctcctttgtgaactcatcacggctgtcttggatccacctgtt 422 ||||||||| || ||||||||||| ||||||| ||||||||||| || ||||||||||| Sbjct: 795 gttgatggaatccaggcgctccttagtgaactggtcacggctgtcctgtatccacctgtt 736 Query: 423 ggcatggagcagcgctgcggggccgagatactcttctgggttccaccagta 473 ||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 735 ggcgtggaggagcgcggcggggccgaggtactcctcggggttccaccagta 685
>ref|XM_507564.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1005_B05.29-1 mRNA Length = 1219 Score = 268 bits (135), Expect = 2e-68 Identities = 207/231 (89%) Strand = Plus / Minus Query: 243 cactcaggctccgagctgcagcttctttattgtgtcgatctgctttgcagggttcagccc 302 ||||||||| ||||||| |||||||| ||||||||||| ||||| || ||||| || || Sbjct: 916 cactcaggcctcgagctggagcttcttgattgtgtcgatgtgcttcgctgggttgaggcc 857 Query: 303 cttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 362 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 856 cttggggcaggcgtgtgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 797 Query: 363 gttgatggagtcaaggcgctcctttgtgaactcatcacggctgtcttggatccacctgtt 422 ||||||||| || ||||||||||| ||||||| ||||||||||| || ||||||||||| Sbjct: 796 gttgatggaatccaggcgctccttagtgaactggtcacggctgtcctgtatccacctgtt 737 Query: 423 ggcatggagcagcgctgcggggccgagatactcttctgggttccaccagta 473 ||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 736 ggcgtggaggagcgcggcggggccgaggtactcctcggggttccaccagta 686
>ref|XM_507563.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1005_B05.29-1 mRNA Length = 1208 Score = 268 bits (135), Expect = 2e-68 Identities = 207/231 (89%) Strand = Plus / Minus Query: 243 cactcaggctccgagctgcagcttctttattgtgtcgatctgctttgcagggttcagccc 302 ||||||||| ||||||| |||||||| ||||||||||| ||||| || ||||| || || Sbjct: 916 cactcaggcctcgagctggagcttcttgattgtgtcgatgtgcttcgctgggttgaggcc 857 Query: 303 cttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 362 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 856 cttggggcaggcgtgtgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 797 Query: 363 gttgatggagtcaaggcgctcctttgtgaactcatcacggctgtcttggatccacctgtt 422 ||||||||| || ||||||||||| ||||||| ||||||||||| || ||||||||||| Sbjct: 796 gttgatggaatccaggcgctccttagtgaactggtcacggctgtcctgtatccacctgtt 737 Query: 423 ggcatggagcagcgctgcggggccgagatactcttctgggttccaccagta 473 ||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 736 ggcgtggaggagcgcggcggggccgaggtactcctcggggttccaccagta 686
>dbj|D10414.1|RICK7 Oryza sativa mRNA for succinate dehydrogenase (K7 gene), partial sequence Length = 814 Score = 268 bits (135), Expect = 2e-68 Identities = 207/231 (89%) Strand = Plus / Minus Query: 243 cactcaggctccgagctgcagcttctttattgtgtcgatctgctttgcagggttcagccc 302 ||||||||| ||||||| |||||||| ||||||||||| ||||| || ||||| || || Sbjct: 484 cactcaggcctcgagctggagcttcttgattgtgtcgatgtgcttcgctgggttgaggcc 425 Query: 303 cttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 362 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 cttggggcaggcgtgtgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 365 Query: 363 gttgatggagtcaaggcgctcctttgtgaactcatcacggctgtcttggatccacctgtt 422 ||||||||| || ||||||||||| ||||||| ||||||||||| || ||||||||||| Sbjct: 364 gttgatggaatccaggcgctccttagtgaactggtcacggctgtcctgtatccacctgtt 305 Query: 423 ggcatggagcagcgctgcggggccgagatactcttctgggttccaccagta 473 ||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 304 ggcgtggaggagcgcggcggggccgaggtactcctcggggttccaccagta 254
>dbj|AK104421.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-C04, full insert sequence Length = 1154 Score = 268 bits (135), Expect = 2e-68 Identities = 207/231 (89%) Strand = Plus / Minus Query: 243 cactcaggctccgagctgcagcttctttattgtgtcgatctgctttgcagggttcagccc 302 ||||||||| ||||||| |||||||| ||||||||||| ||||| || ||||| || || Sbjct: 916 cactcaggcctcgagctggagcttcttgattgtgtcgatgtgcttcgctgggttgaggcc 857 Query: 303 cttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 362 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 856 cttggggcaggcgtgtgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 797 Query: 363 gttgatggagtcaaggcgctcctttgtgaactcatcacggctgtcttggatccacctgtt 422 ||||||||| || ||||||||||| ||||||| ||||||||||| || ||||||||||| Sbjct: 796 gttgatggaatccaggcgctccttagtgaactggtcacggctgtcctgtatccacctgtt 737 Query: 423 ggcatggagcagcgctgcggggccgagatactcttctgggttccaccagta 473 ||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 736 ggcgtggaggagcgcggcggggccgaggtactcctcggggttccaccagta 686
>dbj|AK104304.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-D05, full insert sequence Length = 1208 Score = 268 bits (135), Expect = 2e-68 Identities = 207/231 (89%) Strand = Plus / Minus Query: 243 cactcaggctccgagctgcagcttctttattgtgtcgatctgctttgcagggttcagccc 302 ||||||||| ||||||| |||||||| ||||||||||| ||||| || ||||| || || Sbjct: 916 cactcaggcctcgagctggagcttcttgattgtgtcgatgtgcttcgctgggttgaggcc 857 Query: 303 cttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 362 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 856 cttggggcaggcgtgtgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 797 Query: 363 gttgatggagtcaaggcgctcctttgtgaactcatcacggctgtcttggatccacctgtt 422 ||||||||| || ||||||||||| ||||||| ||||||||||| || ||||||||||| Sbjct: 796 gttgatggaatccaggcgctccttagtgaactggtcacggctgtcctgtatccacctgtt 737 Query: 423 ggcatggagcagcgctgcggggccgagatactcttctgggttccaccagta 473 ||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 736 ggcgtggaggagcgcggcggggccgaggtactcctcggggttccaccagta 686
>dbj|AK104303.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-F04, full insert sequence Length = 1218 Score = 268 bits (135), Expect = 2e-68 Identities = 207/231 (89%) Strand = Plus / Minus Query: 243 cactcaggctccgagctgcagcttctttattgtgtcgatctgctttgcagggttcagccc 302 ||||||||| ||||||| |||||||| ||||||||||| ||||| || ||||| || || Sbjct: 915 cactcaggcctcgagctggagcttcttgattgtgtcgatgtgcttcgctgggttgaggcc 856 Query: 303 cttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 362 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 855 cttggggcaggcgtgtgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 796 Query: 363 gttgatggagtcaaggcgctcctttgtgaactcatcacggctgtcttggatccacctgtt 422 ||||||||| || ||||||||||| ||||||| ||||||||||| || ||||||||||| Sbjct: 795 gttgatggaatccaggcgctccttagtgaactggtcacggctgtcctgtatccacctgtt 736 Query: 423 ggcatggagcagcgctgcggggccgagatactcttctgggttccaccagta 473 ||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 735 ggcgtggaggagcgcggcggggccgaggtactcctcggggttccaccagta 685
>dbj|AB017428.1| Oryza sativa (japonica cultivar-group) mRNA for succinate dehydrogenase iron-protein subunit (SDHB), complete cds Length = 1113 Score = 268 bits (135), Expect = 2e-68 Identities = 207/231 (89%) Strand = Plus / Minus Query: 243 cactcaggctccgagctgcagcttctttattgtgtcgatctgctttgcagggttcagccc 302 ||||||||| ||||||| |||||||| ||||||||||| ||||| || ||||| || || Sbjct: 904 cactcaggcctcgagctggagcttcttgattgtgtcgatgtgcttcgctgggttgaggcc 845 Query: 303 cttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 362 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 844 cttggggcaggcgtgtgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 785 Query: 363 gttgatggagtcaaggcgctcctttgtgaactcatcacggctgtcttggatccacctgtt 422 ||||||||| || ||||||||||| ||||||| ||||||||||| || ||||||||||| Sbjct: 784 gttgatggaatccaggcgctccttagtgaactggtcacggctgtcctgtatccacctgtt 725 Query: 423 ggcatggagcagcgctgcggggccgagatactcttctgggttccaccagta 473 ||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 724 ggcgtggaggagcgcggcggggccgaggtactcctcggggttccaccagta 674
>ref|XM_507102.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1005_B05.29-1 mRNA Length = 1163 Score = 264 bits (133), Expect = 2e-67 Identities = 205/229 (89%) Strand = Plus / Minus Query: 245 ctcaggctccgagctgcagcttctttattgtgtcgatctgctttgcagggttcagcccct 304 ||||||| ||||||| |||||||| ||||||||||| ||||| || ||||| || |||| Sbjct: 916 ctcaggcctcgagctggagcttcttgattgtgtcgatgtgcttcgctgggttgaggccct 857 Query: 305 tggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtcgt 364 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 856 tggggcaggcgtgtgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtcgt 797 Query: 365 tgatggagtcaaggcgctcctttgtgaactcatcacggctgtcttggatccacctgttgg 424 ||||||| || ||||||||||| ||||||| ||||||||||| || ||||||||||||| Sbjct: 796 tgatggaatccaggcgctccttagtgaactggtcacggctgtcctgtatccacctgttgg 737 Query: 425 catggagcagcgctgcggggccgagatactcttctgggttccaccagta 473 | ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 736 cgtggaggagcgcggcggggccgaggtactcctcggggttccaccagta 688
>dbj|AK059815.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B11, full insert sequence Length = 1163 Score = 264 bits (133), Expect = 2e-67 Identities = 205/229 (89%) Strand = Plus / Minus Query: 245 ctcaggctccgagctgcagcttctttattgtgtcgatctgctttgcagggttcagcccct 304 ||||||| ||||||| |||||||| ||||||||||| ||||| || ||||| || |||| Sbjct: 916 ctcaggcctcgagctggagcttcttgattgtgtcgatgtgcttcgctgggttgaggccct 857 Query: 305 tggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtcgt 364 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 856 tggggcaggcgtgtgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtcgt 797 Query: 365 tgatggagtcaaggcgctcctttgtgaactcatcacggctgtcttggatccacctgttgg 424 ||||||| || ||||||||||| ||||||| ||||||||||| || ||||||||||||| Sbjct: 796 tgatggaatccaggcgctccttagtgaactggtcacggctgtcctgtatccacctgttgg 737 Query: 425 catggagcagcgctgcggggccgagatactcttctgggttccaccagta 473 | ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 736 cgtggaggagcgcggcggggccgaggtactcctcggggttccaccagta 688
>dbj|AK099077.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170D08, full insert sequence Length = 1218 Score = 260 bits (131), Expect = 4e-66 Identities = 206/231 (89%) Strand = Plus / Minus Query: 243 cactcaggctccgagctgcagcttctttattgtgtcgatctgctttgcagggttcagccc 302 ||||||||| ||||||| |||||||| ||||||||||| ||||| | ||||| || || Sbjct: 915 cactcaggcctcgagctggagcttcttgattgtgtcgatgtgcttccctgggttgaggcc 856 Query: 303 cttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 362 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 855 cttggggcaggcgtgtgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 796 Query: 363 gttgatggagtcaaggcgctcctttgtgaactcatcacggctgtcttggatccacctgtt 422 ||||||||| || ||||||||||| ||||||| ||||||||||| || ||||||||||| Sbjct: 795 gttgatggaatccaggcgctccttagtgaactggtcacggctgtcctgtatccacctgtt 736 Query: 423 ggcatggagcagcgctgcggggccgagatactcttctgggttccaccagta 473 ||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 735 ggcgtggaggagcgcggcggggccgaggtactcctcggggttccaccagta 685
>gb|AF457978.1| Zea mays clone cen3n.pk0018.h7, mRNA sequence Length = 463 Score = 222 bits (112), Expect = 8e-55 Identities = 161/176 (91%), Gaps = 1/176 (0%) Strand = Plus / Minus Query: 299 gccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagcttgaact 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 452 gccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagcttgaact 393 Query: 359 cgtcgttgatggagtcaaggcgctcctttgtgaactcatcacggctgtcttggatccacc 418 |||||||||||| ||| ||||||||||| ||||||| ||||||||||| || ||||||| Sbjct: 392 cgtcgttgatggcgtccaggcgctccttggtgaactggtcacggctgtcctgtatccacc 333 Query: 419 tgttggcatgg-agcagcgctgcggggccgagatactcttctgggttccaccagta 473 | ||||| ||| |||||||| || |||||||| ||||| || |||||||||||||| Sbjct: 332 tattggcgtggaagcagcgcggctgggccgaggtactcctcggggttccaccagta 277
>emb|AJ012374.1|ZMA012374 Zea mays nuclear sdh2-rps14 gene Length = 3480 Score = 212 bits (107), Expect = 8e-52 Identities = 146/159 (91%) Strand = Plus / Minus Query: 262 agcttctttattgtgtcgatctgctttgcagggttcagccccttggggcaggcatgcgtg 321 |||||||| || ||||||||||||||||| |||||||| || ||||||||||| |||||| Sbjct: 3038 agcttcttgatcgtgtcgatctgctttgccgggttcaggcctttggggcaggcgtgcgtg 2979 Query: 322 cagttcttgatggtgtggcagcggtacagcttgaactcgtcgttgatggagtcaaggcgc 381 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 2978 cagttcttgatggtgtggcagcggtacagcttgaactcgtcgttgatggcgtccaggcgc 2919 Query: 382 tcctttgtgaactcatcacggctgtcttggatccacctg 420 ||||| ||||||| ||||||||||| || ||||||||| Sbjct: 2918 tccttggtgaactggtcacggctgtcctgtatccacctg 2880 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 416 acctgttggcatggagcagcgctgcggggccgagatactcttctgggttccaccagta 473 |||||||||| ||||||||||| || |||||||| ||||| || |||||||||||||| Sbjct: 857 acctgttggcgtggagcagcgcggccgggccgaggtactcctccgggttccaccagta 800
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 210 bits (106), Expect = 3e-51 Identities = 160/178 (89%) Strand = Plus / Plus Query: 243 cactcaggctccgagctgcagcttctttattgtgtcgatctgctttgcagggttcagccc 302 ||||||||| ||||||| |||||||| ||||||||||| ||||| || ||||| || || Sbjct: 1085170 cactcaggcctcgagctggagcttcttgattgtgtcgatgtgcttcgctgggttgaggcc 1085229 Query: 303 cttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 362 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085230 cttggggcaggcgtgtgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 1085289 Query: 363 gttgatggagtcaaggcgctcctttgtgaactcatcacggctgtcttggatccacctg 420 ||||||||| || ||||||||||| ||||||| ||||||||||| || ||||||||| Sbjct: 1085290 gttgatggaatccaggcgctccttagtgaactggtcacggctgtcctgtatccacctg 1085347 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 416 acctgttggcatggagcagcgctgcggggccgagatactcttctgggttccaccagta 473 |||||||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 1087601 acctgttggcgtggaggagcgcggcggggccgaggtactcctcggggttccaccagta 1087658 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 ccacctgttggcatggagca 433 |||||||||||||||||||| Sbjct: 6124628 ccacctgttggcatggagca 6124647
>dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1005_B05 Length = 144799 Score = 210 bits (106), Expect = 3e-51 Identities = 160/178 (89%) Strand = Plus / Plus Query: 243 cactcaggctccgagctgcagcttctttattgtgtcgatctgctttgcagggttcagccc 302 ||||||||| ||||||| |||||||| ||||||||||| ||||| || ||||| || || Sbjct: 113697 cactcaggcctcgagctggagcttcttgattgtgtcgatgtgcttcgctgggttgaggcc 113756 Query: 303 cttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 362 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113757 cttggggcaggcgtgtgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 113816 Query: 363 gttgatggagtcaaggcgctcctttgtgaactcatcacggctgtcttggatccacctg 420 ||||||||| || ||||||||||| ||||||| ||||||||||| || ||||||||| Sbjct: 113817 gttgatggaatccaggcgctccttagtgaactggtcacggctgtcctgtatccacctg 113874 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 416 acctgttggcatggagcagcgctgcggggccgagatactcttctgggttccaccagta 473 |||||||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 116128 acctgttggcgtggaggagcgcggcggggccgaggtactcctcggggttccaccagta 116185
>dbj|AB017429.1| Oryza sativa (japonica cultivar-group) rps14 and sdhB genes for mitochondrial ribosomal portein S14 and succinate dehydrogenase iron-protein subunit, complete cds Length = 3700 Score = 210 bits (106), Expect = 3e-51 Identities = 160/178 (89%) Strand = Plus / Minus Query: 243 cactcaggctccgagctgcagcttctttattgtgtcgatctgctttgcagggttcagccc 302 ||||||||| ||||||| |||||||| ||||||||||| ||||| || ||||| || || Sbjct: 3309 cactcaggcctcgagctggagcttcttgattgtgtcgatgtgcttcgctgggttgaggcc 3250 Query: 303 cttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 362 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3249 cttggggcaggcgtgtgtgcagttcttgatggtgtggcagcggtacagcttgaactcgtc 3190 Query: 363 gttgatggagtcaaggcgctcctttgtgaactcatcacggctgtcttggatccacctg 420 ||||||||| || ||||||||||| ||||||| ||||||||||| || ||||||||| Sbjct: 3189 gttgatggaatccaggcgctccttagtgaactggtcacggctgtcctgtatccacctg 3132 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 416 acctgttggcatggagcagcgctgcggggccgagatactcttctgggttccaccagta 473 |||||||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 878 acctgttggcgtggaggagcgcggcggggccgaggtactcctcggggttccaccagta 821
>ref|NM_001040483.1| Bos taurus succinate dehydrogenase complex, subunit B, iron sulfur (Ip) (SDHB), mRNA Length = 1039 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 290 cagggttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggta 347 |||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||| Sbjct: 798 caggattcagccccttggggcaggtctgcgtgcagttcatgatggtgtggcagcggta 741
>gb|BC102067.1| Bos taurus succinate dehydrogenase complex, subunit B, iron sulfur (Ip), mRNA (cDNA clone MGC:127046 IMAGE:7942444), complete cds Length = 1039 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 290 cagggttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggta 347 |||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||| Sbjct: 798 caggattcagccccttggggcaggtctgcgtgcagttcatgatggtgtggcagcggta 741
>gb|DQ213695.1| Taeniopygia guttata clone 0058P0019H12 succinate dehydrogenase Ip subunit-like mRNA, complete sequence Length = 1001 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 292 gggttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacag 350 |||||||||||||||||||||| | ||||||||| |||||||||||||||||||||| Sbjct: 784 gggttcagccccttggggcaggtgcgggtgcagttcatgatggtgtggcagcggtacag 726
>emb|CR942628.2| Xenopus tropicalis finished cDNA, clone TNeu087p20 Length = 1080 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 292 gggttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacag 350 |||||||||||||||||||| | ||||||||||| |||||||||||||||||||||| Sbjct: 801 gggttcagccccttggggcatgtgcgcgtgcagttcatgatggtgtggcagcggtacag 743
>gb|U31902.1|PDU31902 Paracoccus denitrificans succinate dehydrogenase b-type cytochrome subunit (sdhC), succinate dehydrogenase hydrophobic membrane anchor (sdhD), succinate dehydrogenase flavoprotein subunit (sdhA), and succinate dehydrogenase iron-sulfur protein subunit (sdhB) genes, complete cds Length = 6380 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 292 gggttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagc 351 |||||||||||||||||||||| | ||||||||| |||| ||||||||||| |||||| Sbjct: 5940 gggttcagccccttggggcaggtgttggtgcagttcatgatcgtgtggcagcgatacagc 5881 Query: 352 ttgaac 357 |||||| Sbjct: 5880 ttgaac 5875
>gb|BC106300.1| Xenopus laevis succinate dehydrogenase complex, subunit B, iron sulfur (Ip), mRNA (cDNA clone MGC:130803 IMAGE:7767032), complete cds Length = 1070 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 292 gggttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacag 350 |||||||| ||||||||||||| | ||||||||| |||||||||||||||||||||| Sbjct: 813 gggttcaggcccttggggcaggtgcgggtgcagttcatgatggtgtggcagcggtacag 755
>gb|BC043859.1| Xenopus laevis succinate dehydrogenase complex, subunit B, iron sulfur (Ip), mRNA (cDNA clone MGC:53699 IMAGE:4889400), complete cds Length = 1051 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 292 gggttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacag 350 |||||||| ||||||||||||| | ||||||||| |||||||||||||||||||||| Sbjct: 790 gggttcaggcccttggggcaggtgcgggtgcagttcatgatggtgtggcagcggtacag 732
>gb|AE012320.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 228 of 460 of the complete genome Length = 13110 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 292 gggttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagc 351 |||||||||||||| ||||||| | | ||||||| |||||||||||||||| |||||| Sbjct: 132 gggttcagccccttagggcaggtgcgggcgcagttcatgatggtgtggcagcgatacagc 191 Query: 352 ttgaac 357 |||||| Sbjct: 192 ttgaac 197
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 292 gggttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagc 351 |||||||||||||| ||||||| | | ||||||| |||||||||||||||| |||||| Sbjct: 2397495 gggttcagccccttagggcaggtgcgggcgcagttcatgatggtgtggcagcgatacagc 2397436 Query: 352 ttgaac 357 |||||| Sbjct: 2397435 ttgaac 2397430
>dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1203H11 Length = 156561 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 416 acctgttggcatggagcagcgctgcggggccgagatactcttctgggttccaccagta 473 |||||||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 838 acctgttggcgtggaggagcgcggcggggccgaggtactcctcggggttccaccagta 895
>ref|XM_479820.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1257 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 417 cctgttggcatggagcagcgctgcggggccgagatactcttctgggttccaccagta 473 ||||||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 741 cctgttggcgtggaggagcgcggcggggccgaggtactcctcggggttccaccagta 685
>ref|XM_507103.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1005_B05.29-2 mRNA Length = 1328 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 417 cctgttggcatggagcagcgctgcggggccgagatactcttctgggttccaccagta 473 ||||||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 737 cctgttggcgtggaggagcgcggcggggccgaggtactcctcggggttccaccagta 681
>gb|BC051934.1| Mus musculus succinate dehydrogenase complex, subunit B, iron sulfur (Ip), mRNA (cDNA clone MGC:62176 IMAGE:5688898), complete cds Length = 1091 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 295 ttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggta 347 ||||| ||||||||||||| || ||||||||| ||||||||||||||||||| Sbjct: 913 ttcagacccttggggcaggtctgtgtgcagttcatgatggtgtggcagcggta 861
>ref|NM_023374.3| Mus musculus succinate dehydrogenase complex, subunit B, iron sulfur (Ip) (Sdhb), mRNA Length = 1091 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 295 ttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggta 347 ||||| ||||||||||||| || ||||||||| ||||||||||||||||||| Sbjct: 913 ttcagacccttggggcaggtctgtgtgcagttcatgatggtgtggcagcggta 861
>dbj|AK153045.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830119O20 product:succinate dehydrogenase complex, subunit B, iron sulfur (Ip), full insert sequence Length = 946 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 295 ttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggta 347 ||||| ||||||||||||| || ||||||||| ||||||||||||||||||| Sbjct: 790 ttcagacccttggggcaggtctgtgtgcagttcatgatggtgtggcagcggta 738
>dbj|AK169839.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430034O09 product:succinate dehydrogenase complex, subunit B, iron sulfur (Ip), full insert sequence Length = 962 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 295 ttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggta 347 ||||| ||||||||||||| || ||||||||| ||||||||||||||||||| Sbjct: 806 ttcagacccttggggcaggtctgtgtgcagttcatgatggtgtggcagcggta 754
>dbj|AK169252.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920099B22 product:succinate dehydrogenase complex, subunit B, iron sulfur (Ip), full insert sequence Length = 963 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 295 ttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggta 347 ||||| ||||||||||||| || ||||||||| ||||||||||||||||||| Sbjct: 804 ttcagacccttggggcaggtctgtgtgcagttcatgatggtgtggcagcggta 752
>dbj|AK009660.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310037H18 product:DJ37C10.2 (SUCCINATE DEHYDROGENASE COMPLEX, SUBUNIT B, IRON SULFUR (IP) (EC 1.3.5.1, SDH1)) (UNKNOWN) (PROTEIN FOR MGC:14116) homolog [Homo sapiens], full insert sequence Length = 963 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 295 ttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggta 347 ||||| ||||||||||||| || ||||||||| ||||||||||||||||||| Sbjct: 807 ttcagacccttggggcaggtctgtgtgcagttcatgatggtgtggcagcggta 755
>dbj|AK003052.1| Mus musculus adult male brain cDNA, RIKEN full-length enriched library, clone:0710008N11 product:DJ37C10.2 (SUCCINATE DEHYDROGENASE COMPLEX, SUBUNIT B, IRON SULFUR (IP) (EC 1.3.5.1, SDH1)) (UNKNOWN) (PROTEIN FOR MGC:14116) homolog [Homo sapiens], full insert sequence Length = 972 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 295 ttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggta 347 ||||| ||||||||||||| || ||||||||| ||||||||||||||||||| Sbjct: 807 ttcagacccttggggcaggtctgtgtgcagttcatgatggtgtggcagcggta 755
>dbj|AK190493.1| Mus musculus cDNA, clone:Y1G0102O16, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000010007, based on BLAT search Length = 389 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 295 ttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggta 347 ||||| ||||||||||||| || ||||||||| ||||||||||||||||||| Sbjct: 385 ttcagacccttggggcaggtctgtgtgcagttcatgatggtgtggcagcggta 333
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 292 gggttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcg 344 |||||||| ||||||||||||| |||| ||||||| |||||||||||||||| Sbjct: 3398022 gggttcaggcccttggggcaggtctgcgcgcagttcatgatggtgtggcagcg 3398074
>dbj|AK102607.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099B04, full insert sequence Length = 1257 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 417 cctgttggcatggagcagcgctgcggggccgagatactcttctgggttccaccagta 473 ||||||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 741 cctgttggcgtggaggagcgcggcggggccgaggtactcctcggggttccaccagta 685
>dbj|AK059789.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-D12, full insert sequence Length = 1328 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 417 cctgttggcatggagcagcgctgcggggccgagatactcttctgggttccaccagta 473 ||||||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 737 cctgttggcgtggaggagcgcggcggggccgaggtactcctcggggttccaccagta 681
>dbj|AB017427.1| Oryza sativa (japonica cultivar-group) mRNA for mitochondrial ribosomal protein S14, complete cds Length = 1233 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 417 cctgttggcatggagcagcgctgcggggccgagatactcttctgggttccaccagta 473 ||||||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 695 cctgttggcgtggaggagcgcggcggggccgaggtactcctcggggttccaccagta 639
>ref|XM_845169.1| PREDICTED: Canis familiaris similar to Succinate dehydrogenase [ubiquinone] iron-sulfur protein, mitochondrial precursor (Ip) (Iron-sulfur subunit of complex II) (LOC608210), mRNA Length = 990 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 295 ttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacag 350 ||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 781 ttcagccccttggggcaggtccttgtgcagttcatgatggtgtggcagcggtacag 726
>ref|XM_535392.2| PREDICTED: Canis familiaris similar to Succinate dehydrogenase [ubiquinone] iron-sulfur protein, mitochondrial precursor (Ip) (Iron-sulfur subunit of complex II), transcript variant 1 (LOC478217), mRNA Length = 992 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 295 ttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacag 350 ||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 783 ttcagccccttggggcaggtccttgtgcagttcatgatggtgtggcagcggtacag 728
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 292 gggttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagc 351 |||||||| ||||||||||||| | | ||||||| |||| |||||||||||||| ||| Sbjct: 2738954 gggttcagacccttggggcaggtcttggcgcagttcatgatcgtgtggcagcggtagagc 2738895 Query: 352 ttgaac 357 |||||| Sbjct: 2738894 ttgaac 2738889
>gb|AY550052.1| Sus scrofa succinate dehydrogenase iron-protein subunit mRNA, partial cds Length = 283 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 297 cagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacag 350 |||||||||||| |||| |||||||||| |||||||||||||||||||||| Sbjct: 60 cagccccttgggacaggtccccgtgcagttcatgatggtgtggcagcggtacag 7
>emb|BX014230.1|CNS08J56 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA21BE01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 904 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 292 gggttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtaca 349 |||||||||||||| ||||||| ||||||||||| |||| |||||||| ||||||| Sbjct: 809 gggttcagccccttcgggcaggtgcgcgtgcagttcatgatcgtgtggcaccggtaca 866
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggtacagcttgaa 356 ||||||||| |||||||||||||||| ||||||||||| Sbjct: 4362643 gtgcagttcatgatggtgtggcagcgatacagcttgaa 4362606
>ref|XM_308512.2| Anopheles gambiae str. PEST ENSANGP00000024398 (ENSANGG00000013539), partial mRNA Length = 762 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 292 gggttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtaca 349 |||||||||||||| ||||||| ||||||||||| |||| |||||||| ||||||| Sbjct: 674 gggttcagccccttcgggcaggtgcgcgtgcagttcatgatcgtgtggcaccggtaca 617
>emb|AL645625.15| Mouse DNA sequence from clone RP23-183L1 on chromosome 4, complete sequence Length = 226754 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 302 ccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggta 347 |||||||||||| || ||||||||| ||||||||||||||||||| Sbjct: 60265 ccttggggcaggtctgtgtgcagttcatgatggtgtggcagcggta 60220
>gb|BT017381.1| Zea mays clone EL01N0326E03.c mRNA sequence Length = 1367 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 421 ttggcatggagcagcgctgcggggccgagatactcttctgggttccaccagta 473 ||||| ||||||||||| || |||||||| ||||| || |||||||||||||| Sbjct: 723 ttggcgtggagcagcgcggctgggccgaggtactcctcggggttccaccagta 671
>gb|AY682984.1| Xanthomonas citri succinate dehydrogenase subunit B (sdhB) gene, complete cds Length = 929 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 321 gcagttcttgatggtgtggcagcggtacagcttgaac 357 ||||||| |||||||||||||||| |||||||||||| Sbjct: 749 gcagttcatgatggtgtggcagcgatacagcttgaac 713
>gb|BC013509.1| Mus musculus succinate dehydrogenase complex, subunit B, iron sulfur (Ip), mRNA (cDNA clone MGC:19177 IMAGE:4225025), complete cds Length = 986 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 295 ttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggta 347 ||||| ||||| ||||||| || ||||||||| ||||||||||||||||||| Sbjct: 808 ttcagacccttagggcaggtctgtgtgcagttcatgatggtgtggcagcggta 756
>ref|XM_914820.2| PREDICTED: Mus musculus similar to succinate dehydrogenase Ip subunit (LOC638710), mRNA Length = 995 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 295 ttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggta 347 ||||| ||||| ||||||| || ||||||||| ||||||||||||||||||| Sbjct: 831 ttcagacccttagggcaggtctgtgtgcagttcatgatggtgtggcagcggta 779
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 321 gcagttcttgatggtgtggcagcggtacagcttgaac 357 ||||||| |||||||||||||||| |||||||||||| Sbjct: 2577143 gcagttcatgatggtgtggcagcgatacagcttgaac 2577107
>gb|BC018580.1| Mus musculus succinate dehydrogenase complex, subunit B, iron sulfur (Ip), mRNA (cDNA clone IMAGE:3583751) Length = 946 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 295 ttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggta 347 ||||| ||||| ||||||| || ||||||||| ||||||||||||||||||| Sbjct: 772 ttcagacccttagggcaggtctgtgtgcagttcatgatggtgtggcagcggta 720
>gb|AE011843.1| Xanthomonas axonopodis pv. citri str. 306, section 221 of 469 of the complete genome Length = 12507 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 321 gcagttcttgatggtgtggcagcggtacagcttgaac 357 ||||||| |||||||||||||||| |||||||||||| Sbjct: 9537 gcagttcatgatggtgtggcagcgatacagcttgaac 9501
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 292 gggttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagc 351 |||||||| || |||||||||| | |||||| ||| |||| |||||||||||||| ||| Sbjct: 765808 gggttcaggcctttggggcaggtcttcgtgcaattcatgatcgtgtggcagcggtagagc 765867 Query: 352 ttgaa 356 ||||| Sbjct: 765868 ttgaa 765872
>dbj|AK003533.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110007E13 product:SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN, MITOCHONDRIAL PRECURSOR (EC 1.3.5.1) (IP) (IRON-SULFUR SUBUNIT OF COMPLEX II) homolog [Homo sapiens], full insert sequence Length = 955 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 295 ttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggta 347 ||||| ||||||||||||| || ||||| ||| ||||||||||||||||||| Sbjct: 797 ttcagacccttggggcaggtctgtgtgcaattcatgatggtgtggcagcggta 745
>ref|XM_216558.2| PREDICTED: Rattus norvegicus succinate dehydrogenase complex, subunit B, iron sulfur (Ip) (predicted) (Sdhb_predicted), mRNA Length = 890 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 295 ttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggta 347 ||||| ||||||||||||| || || |||||| ||||||||||||||||||| Sbjct: 805 ttcagacccttggggcaggtctgtgtacagttcatgatggtgtggcagcggta 753
>dbj|AK181550.1| Mus musculus cDNA, clone:Y0G0118I23, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000010007, based on BLAT search Length = 299 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 295 ttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggta 347 ||||| ||||||||||||| || |||||||| ||||||||||||||||||| Sbjct: 295 ttcagacccttggggcaggtctgtttgcagttcatgatggtgtggcagcggta 243
>gb|AY661544.1| Xanthomonas oryzae pv. oryzae succinate dehydrogenase membrane anchor subunit (sdhC), succinate dehydrogenase membrane anchor subunit (sdhD), succinate dehydrogenase flavoprotein subunit (sdhA), and succinate dehydrogenase iron-sulfur subunit (sdhB) genes, complete cds Length = 3616 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 321 gcagttcttgatggtgtggcagcggtacagcttgaa 356 ||||||| |||||||||||||||| ||||||||||| Sbjct: 3535 gcagttcatgatggtgtggcagcgatacagcttgaa 3500
>ref|XM_859608.1| PREDICTED: Canis familiaris similar to Succinate dehydrogenase [ubiquinone] iron-sulfur protein, mitochondrial precursor (Ip) (Iron-sulfur subunit of complex II), transcript variant 2 (LOC478217), mRNA Length = 790 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggtacag 350 ||||||||| |||||||||||||||||||||| Sbjct: 759 gtgcagttcatgatggtgtggcagcggtacag 728
>ref|XM_845487.1| PREDICTED: Canis familiaris similar to Succinate dehydrogenase [ubiquinone] iron-sulfur protein, mitochondrial precursor (Ip) (Iron-sulfur subunit of complex II) (LOC608456), mRNA Length = 360 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 295 ttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacag 350 ||||||||||||||||||| ||||||||| |||||||| ||||||||||||| Sbjct: 266 ttcagccccttggggcaggtccttgtgcagttcatgatggtgcggcagcggtacag 211
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 292 gggttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagc 351 |||||||| |||||||||||| ||| ||||||| ||||||||||||||||| ||||| Sbjct: 3805844 gggttcaggcccttggggcagacatcgacgcagttcatgatggtgtggcagcggaacagc 3805785
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 321 gcagttcttgatggtgtggcagcggtacagcttgaa 356 ||||||| |||||||||||||||| ||||||||||| Sbjct: 2423366 gcagttcatgatggtgtggcagcgatacagcttgaa 2423401
>ref|XM_685549.1| PREDICTED: Danio rerio similar to Sdhb-prov protein (LOC562149), partial mRNA Length = 531 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggtacag 350 ||||||||| |||||||||||||||||||||| Sbjct: 515 gtgcagttcatgatggtgtggcagcggtacag 484
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 301 cccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagcttgaa 356 ||||| |||||||||| ||||||||| ||||||||||||| ||| |||| ||||| Sbjct: 1643333 cccttcgggcaggcatcggtgcagttcatgatggtgtggcaccggaacagtttgaa 1643388
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 321 gcagttcttgatggtgtggcagcggtacagcttgaa 356 ||||||| |||||||||||||||| ||||||||||| Sbjct: 2443438 gcagttcatgatggtgtggcagcgatacagcttgaa 2443473
>gb|AY118923.1| Drosophila melanogaster LD23740 full insert cDNA Length = 1247 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 298 agccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggta 347 |||||||||||||||| ||||||||||| |||| |||||||| ||||| Sbjct: 923 agccccttggggcaggtgcgcgtgcagttcatgatcgtgtggcaccggta 874
>ref|NM_057753.3| Drosophila melanogaster Succinate dehydrogenase B CG3283-RA (SdhB), mRNA Length = 1235 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 298 agccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggta 347 |||||||||||||||| ||||||||||| |||| |||||||| ||||| Sbjct: 941 agccccttggggcaggtgcgcgtgcagttcatgatcgtgtggcaccggta 892
>gb|AC008340.5| Drosophila melanogaster, chromosome 2R, region 42D-42E, BAC clone BACR07J20, complete sequence Length = 181771 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 298 agccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggta 347 |||||||||||||||| ||||||||||| |||| |||||||| ||||| Sbjct: 102443 agccccttggggcaggtgcgcgtgcagttcatgatcgtgtggcaccggta 102394
>gb|AC007549.5|AC007549 Drosophila melanogaster, chromosome 2R, region 42D-42E, BAC clone BACR04F03, complete sequence Length = 150587 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 298 agccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggta 347 |||||||||||||||| ||||||||||| |||| |||||||| ||||| Sbjct: 51532 agccccttggggcaggtgcgcgtgcagttcatgatcgtgtggcaccggta 51483
>gb|AE003790.2| Drosophila melanogaster chromosome 2R, section 7 of 73 of the complete sequence Length = 348873 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 298 agccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggta 347 |||||||||||||||| ||||||||||| |||| |||||||| ||||| Sbjct: 138654 agccccttggggcaggtgcgcgtgcagttcatgatcgtgtggcaccggta 138605
>gb|L27705.1|DROSDHB Drosophila melanogaster succinate dehydrogenase iron-subunit (sdhB) gene, complete cds Length = 2741 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 298 agccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggta 347 |||||||||||||||| ||||||||||| |||| |||||||| ||||| Sbjct: 2142 agccccttggggcaggtgcgcgtgcagttcatgatcgtgtggcaccggta 2093
>ref|XM_513112.1| PREDICTED: Pan troglodytes succinate dehydrogenase complex, subunit B, iron sulfur (Ip) (LOC456526), mRNA Length = 789 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| ||||||||||||||||||| Sbjct: 695 gtgcagttcatgatggtgtggcagcggta 667
>gb|BC007840.2| Homo sapiens succinate dehydrogenase complex, subunit B, iron sulfur (Ip), mRNA (cDNA clone MGC:14116 IMAGE:4124737), complete cds Length = 1130 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| ||||||||||||||||||| Sbjct: 900 gtgcagttcatgatggtgtggcagcggta 872
>emb|CR733346.2|CNS0GSNQ Tetraodon nigroviridis full-length cDNA Length = 1040 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| ||||||||||||||||||| Sbjct: 840 gtgcagttcatgatggtgtggcagcggta 812
>emb|CR705776.2|CNS0G7J0 Tetraodon nigroviridis full-length cDNA Length = 1014 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| ||||||||||||||||||| Sbjct: 814 gtgcagttcatgatggtgtggcagcggta 786
>emb|CR704266.2|CNS0G6D2 Tetraodon nigroviridis full-length cDNA Length = 1004 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| ||||||||||||||||||| Sbjct: 819 gtgcagttcatgatggtgtggcagcggta 791
>emb|CR689174.2|CNS0FUPU Tetraodon nigroviridis full-length cDNA Length = 999 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| ||||||||||||||||||| Sbjct: 816 gtgcagttcatgatggtgtggcagcggta 788
>emb|CR687900.2|CNS0FTQG Tetraodon nigroviridis full-length cDNA Length = 1012 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| ||||||||||||||||||| Sbjct: 814 gtgcagttcatgatggtgtggcagcggta 786
>emb|CR661751.2|CNS0F9KT Tetraodon nigroviridis full-length cDNA Length = 1040 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| ||||||||||||||||||| Sbjct: 840 gtgcagttcatgatggtgtggcagcggta 812
>emb|CR658529.1|CNS0F73B Tetraodon nigroviridis full-length cDNA Length = 1018 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| ||||||||||||||||||| Sbjct: 834 gtgcagttcatgatggtgtggcagcggta 806
>emb|CR650202.1|CNS0F0O0 Tetraodon nigroviridis full-length cDNA Length = 867 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| ||||||||||||||||||| Sbjct: 792 gtgcagttcatgatggtgtggcagcggta 764
>emb|AL049569.13|HSDJ37C10 Human DNA sequence from clone RP1-37C10 on chromosome 1p35.2-35.21 Contains the 3' end of the CROCC gene for ciliary rootlet coiled-coil rootletin (KIAA0445), the MFAP2 gene for microfibrillar-associated protein 2, a novel gene, the gene for a novel protein, the SDHB gene for succinate dehydrogenase complex subunit B iron sulfur (Ip), the PADI2 gene for type II peptidyl arginine deiminase, complete sequence Length = 216497 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| ||||||||||||||||||| Sbjct: 134863 gtgcagttcatgatggtgtggcagcggta 134835 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 4673 gctttgcagggttcagcccct 4693
>emb|AL163191.2|SPAC140 S.pombe chromosome I cosmid c140 Length = 15326 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 437 ctgcggggccgagatactcttctgggttccaccagta 473 |||| ||||| ||||||||||||| |||||||||||| Sbjct: 1289 ctgctgggccaagatactcttctgagttccaccagta 1253
>gb|AE006011.1| Caulobacter crescentus CB15 section 337 of 359 of the complete genome Length = 10158 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 292 gggttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtacagc 351 |||||||||||||||||||| | || | ||||||| |||| || |||||||| || ||| Sbjct: 4695 gggttcagccccttggggcaaacctgggcgcagttcatgatcgtatggcagcgatagagc 4754 Query: 352 ttgaa 356 ||||| Sbjct: 4755 ttgaa 4759
>ref|NM_003000.1| Homo sapiens succinate dehydrogenase complex, subunit B, iron sulfur (Ip) (SDHB), mRNA Length = 1100 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| ||||||||||||||||||| Sbjct: 883 gtgcagttcatgatggtgtggcagcggta 855
>emb|CR610874.1| full-length cDNA clone CS0DI041YC11 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 961 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| ||||||||||||||||||| Sbjct: 750 gtgcagttcatgatggtgtggcagcggta 722
>emb|CR606201.1| full-length cDNA clone CS0DI064YA14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 653 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| ||||||||||||||||||| Sbjct: 403 gtgcagttcatgatggtgtggcagcggta 375
>emb|CR596760.1| full-length cDNA clone CS0DI052YP22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 839 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| ||||||||||||||||||| Sbjct: 583 gtgcagttcatgatggtgtggcagcggta 555
>emb|CR596635.1| full-length cDNA clone CS0DK004YD20 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 793 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| ||||||||||||||||||| Sbjct: 537 gtgcagttcatgatggtgtggcagcggta 509
>emb|CR595888.1| full-length cDNA clone CS0DI035YE01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 849 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| ||||||||||||||||||| Sbjct: 593 gtgcagttcatgatggtgtggcagcggta 565
>emb|CR593493.1| full-length cDNA clone CS0DL011YN10 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1086 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| ||||||||||||||||||| Sbjct: 896 gtgcagttcatgatggtgtggcagcggta 868
>ref|NM_001018964.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC140.01), partial mRNA Length = 759 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 437 ctgcggggccgagatactcttctgggttccaccagta 473 |||| ||||| ||||||||||||| |||||||||||| Sbjct: 568 ctgctgggccaagatactcttctgagttccaccagta 532
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 420 gttggcatggagcagcgctgcggggccgagata 452 |||||| ||||||||||| |||||||||||||| Sbjct: 552998 gttggcctggagcagcgcggcggggccgagata 552966 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Minus Query: 292 gggttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggta 347 ||||| || ||||| |||||||| | | ||||||| ||||||||||||||||||| Sbjct: 553126 gggttgaggcccttcgggcaggccttggcgcagttcatgatggtgtggcagcggta 553071
>gb|AF007569.1|AF007569 Bradyrhizobium japonicum GstR (gstR) gene, partial cds, and succinate dehydrogenase membrane anchor subunit (sdhC), membrane anchor subunit (sdhD), flavoprotein subunit (sdhA) and iron-sulfur protein subunit (sdhB) genes, complete cds Length = 5284 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 420 gttggcatggagcagcgctgcggggccgagata 452 |||||| ||||||||||| |||||||||||||| Sbjct: 4790 gttggcctggagcagcgcggcggggccgagata 4758 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Minus Query: 292 gggttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcggta 347 ||||| || ||||| |||||||| | | ||||||| ||||||||||||||||||| Sbjct: 4918 gggttgaggcccttcgggcaggccttggcgcagttcatgatggtgtggcagcggta 4863
>gb|U17248.1|HSU17248 Human succinate dehydrogenase iron-protein subunit (sdhB) gene, complete cds Length = 1100 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| ||||||||||||||||||| Sbjct: 883 gtgcagttcatgatggtgtggcagcggta 855
>gb|U17885.1|HSSDHBS7 Human succinate dehydrogenase iron-protein subunit (sdhB) gene, exon 7 Length = 321 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| ||||||||||||||||||| Sbjct: 201 gtgcagttcatgatggtgtggcagcggta 173
>gb|M32246.1|HUMCOMIIP Human succinate-ubiquinone oxidoreductase iron sulfur (Ip) subunit mRNA, 3' end Length = 911 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| ||||||||||||||||||| Sbjct: 695 gtgcagttcatgatggtgtggcagcggta 667
>dbj|D10245.1|HUMSDHBMT Homo sapiens mRNA for mitochondrial succinate-ubiquinone oxidoreductase iron sulfur subunit Length = 911 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| ||||||||||||||||||| Sbjct: 695 gtgcagttcatgatggtgtggcagcggta 667
>dbj|AB066516.1| Macaca fascicularis brain cDNA clone:QmoA-10618, full insert sequence Length = 2780 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 319 gtgcagttcttgatggtgtggcagcggt 346 ||||||||| |||||||||||||||||| Sbjct: 1631 gtgcagttcatgatggtgtggcagcggt 1658
>gb|DQ145263.1| Drosophila miranda neo-Y SdhB gene, partial sequence Length = 1190 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Minus Query: 292 gggttcagccccttggggcaggcatgcgtgcagttcttgatggtgtg 338 |||||||| |||||||| |||| ||||||||||| |||||||||| Sbjct: 1097 gggttcaggcccttgggacaggtgcgcgtgcagttcatgatggtgtg 1051
>gb|DQ145262.1| Drosophila miranda neo-X SdhB gene, partial sequence Length = 1190 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Minus Query: 292 gggttcagccccttggggcaggcatgcgtgcagttcttgatggtgtg 338 |||||||| |||||||| |||| ||||||||||| |||||||||| Sbjct: 1097 gggttcaggcccttgggacaggtgcgcgtgcagttcatgatggtgtg 1051
>gb|DQ066192.1| Ixodes scapularis isolate ISUFL97 succinate dehydrogenase Ip subunit mRNA, complete cds Length = 849 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Minus Query: 303 cttggggcaggcatgcgtgcagttcttgatggtgtggcagcggtaca 349 ||||||||||| | ||||||||| ||||||||||||| ||||||| Sbjct: 756 cttggggcaggtcttggtgcagttcatgatggtgtggcaacggtaca 710
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 321 gcagttcttgatggtgtggcagcggtacagc 351 ||||||| ||||||||||||||||| ||||| Sbjct: 1114996 gcagttcatgatggtgtggcagcggaacagc 1114966
>gb|AC108013.5| Homo sapiens BAC clone RP13-538M20 from 4, complete sequence Length = 118662 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccctt 305 |||||||||||||||||||||| Sbjct: 100330 gctttgcagggttcagcccctt 100351
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 321 gcagttcttgatggtgtggcagcggtacag 350 ||||||| ||||||||||||||||| |||| Sbjct: 2170166 gcagttcatgatggtgtggcagcggaacag 2170195
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 296 tcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcg 344 |||||||||| ||||| |||| | ||||||| |||| ||||||||||| Sbjct: 2347272 tcagccccttcgggcacgcattggcgcagttcatgatcgtgtggcagcg 2347320
>ref|XM_654844.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2332.2), mRNA Length = 822 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 289 gcagggttcagccccttggggcagg 313 ||||||||||| ||||||||||||| Sbjct: 779 gcagggttcagacccttggggcagg 755
>emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12 Length = 333800 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 292 gggttcagccccttggggcaggcatgcgtgcagttcttgatggtgtggcagcg 344 ||||||| |||||| || ||||| || | ||||||| |||| ||||||||||| Sbjct: 284282 gggttcaaccccttcggacaggcctgggcgcagttcatgattgtgtggcagcg 284334
>gb|AC129290.4| Mus musculus BAC clone RP24-489L4 from chromosome 6, complete sequence Length = 188132 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 gaaccaccaaactagatacag 75 ||||||||||||||||||||| Sbjct: 161463 gaaccaccaaactagatacag 161483
>emb|CR701692.1|CNS0G4DK Tetraodon nigroviridis full-length cDNA Length = 1268 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| |||| |||||||||||||| Sbjct: 754 gtgcagttcatgatagtgtggcagcggta 726
>emb|CR699236.1|CNS0G2HC Tetraodon nigroviridis full-length cDNA Length = 1248 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| |||| |||||||||||||| Sbjct: 745 gtgcagttcatgatagtgtggcagcggta 717
>emb|CR695417.2|CNS0FZJ9 Tetraodon nigroviridis full-length cDNA Length = 1234 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| |||| |||||||||||||| Sbjct: 759 gtgcagttcatgatagtgtggcagcggta 731
>emb|CR688415.2|CNS0FU4R Tetraodon nigroviridis full-length cDNA Length = 1275 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| |||| |||||||||||||| Sbjct: 758 gtgcagttcatgatagtgtggcagcggta 730
>emb|CR681198.2|CNS0FOKA Tetraodon nigroviridis full-length cDNA Length = 1065 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| |||| |||||||||||||| Sbjct: 760 gtgcagttcatgatagtgtggcagcggta 732
>emb|CR676594.2|CNS0FL0U Tetraodon nigroviridis full-length cDNA Length = 1288 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| |||| |||||||||||||| Sbjct: 765 gtgcagttcatgatagtgtggcagcggta 737
>emb|CR665870.1|CNS0FCR8 Tetraodon nigroviridis full-length cDNA Length = 1281 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| |||| |||||||||||||| Sbjct: 767 gtgcagttcatgatagtgtggcagcggta 739
>emb|CR659456.2|CNS0F7T2 Tetraodon nigroviridis full-length cDNA Length = 1047 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| |||| |||||||||||||| Sbjct: 306 gtgcagttcatgatagtgtggcagcggta 278
>emb|BX664727.7| Human DNA sequence from clone RP11-146D12 on chromosome 9 Contains the 3' end of a novel gene similar to ankyrin repeat domain 20A (ANKRD20A), a novel zinc finger pseudogene, a pseudogene similar to part of sorting nexin associated golgi protein 1 (SNAG1), a melanoma antigen (LOC51152) pseudogene and three novel genes, complete sequence Length = 105929 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 74382 gctttgcagggttcagcccct 74362
>emb|AL928636.8| Human DNA sequence from clone RP13-417F5 on chromosome X, complete sequence Length = 171922 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 142572 gctttgcagggttcagcccct 142552
>emb|AL589765.19| Human DNA sequence from clone RP11-98D18 on chromosome 1 Contains the 3' end of the SNX27 gene for sorting nexin family member 27, the TNRC4 gene for trinucleotide repeat containing 4, five novel genes, a ribosomal protein S11 (RPS11) pseudogene, the MRPL9 gene for mitochondrial ribosomal protein L9, the OAZ3 gene for ornithine decarboxylase antizyme 3, a novel gene (FLJ36032) the TDRKH gene for tudor and KH domain containing, the RORC gene for RAR-related orphan receptor C and four CpG islands, complete sequence Length = 163389 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 60304 gctttgcagggttcagcccct 60284
>emb|AL513478.10| Human DNA sequence from clone RP11-327I22 on chromosome 9 Contains a pseudogene similar to part of sorting nexin associated golgi protein 1 (SNAG1), the ANKRD20A gene for ankyrin repeat domain 20A, five novel genes, a pseudogene similar to part of eprin A, alpha (PABA peptide hydrolase) (MEP1A) and a CpG island, complete sequence Length = 180498 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 16166 gctttgcagggttcagcccct 16186
>emb|AL513187.6| Human DNA sequence from clone RP11-436H6 on chromosome 1 Contains part of the NTNG1 gene for netrin G1, complete sequence Length = 122032 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 61478 gctttgcagggttcagcccct 61498
>emb|AL359878.13| Human DNA sequence from clone RP11-363N22 on chromosome 10 Contains the 5' end of gene KIAA0217, a novel gene, the 5' end of the gene for G protein-binding protein CRFG (NGB FLJ10686 FLJ10690 FLJ39774) and four CpG islands, complete sequence Length = 184289 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 284 gctttgcagggttcagccccttggg 308 |||||||||||||||||||| |||| Sbjct: 161269 gctttgcagggttcagccccctggg 161293
>emb|AL358174.12| Human DNA sequence from clone RP11-387H19 on chromosome Xq27.1-28, complete sequence Length = 96743 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 73574 gctttgcagggttcagcccct 73554
>gb|AC079271.4| Homo sapiens chromosome 10 clone RP11-455I1, complete sequence Length = 200476 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 86753 gctttgcagggttcagcccct 86733
>emb|AL162723.12| Human DNA sequence from clone RP13-428K23 on chromosome X, complete sequence Length = 192780 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 173271 gctttgcagggttcagcccct 173291
>emb|AL158824.11| Human DNA sequence from clone RP11-165N19 on chromosome 9 Contains a ribosomal protein L29 (RPL29) pseudogene, the 3' end of the gene for regulator of differentiation 1 (ROD1), a novel gene containing DKFZP761E1824, a heat shock 10 KDa protein 1 (HSPE1) pseudogene and a CpG island, complete sequence Length = 147345 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 117752 gctttgcagggttcagcccct 117732
>emb|AL133321.11| Human DNA sequence from clone RP13-17E1 on chromosome X Contains part of the PCDH11X gene for protocadherin 11 X-linked, complete sequence Length = 170805 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 72410 gctttgcagggttcagcccct 72430
>emb|AL078623.28|HSJ1069C8 Human DNA sequence from clone RP5-1069C8 on chromosome 20 Contains the 3' end of a novel gene, a novel gene and a CpG island, complete sequence Length = 177102 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 162100 gctttgcagggttcagcccct 162080
>emb|AL023655.1|HS242N11 Human DNA sequence from clone RP1-242N11 on chromosome 6p22.3-23, complete sequence Length = 167514 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 101553 gctttgcagggttcagcccct 101573
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16 Length = 347137 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 322 cagttcttgatggtgtggcagcggtacag 350 |||||| ||||||||||||||||| |||| Sbjct: 66971 cagttcatgatggtgtggcagcggaacag 66999
>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14 Length = 349305 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 322 cagttcttgatggtgtggcagcggtacag 350 |||||| ||||||||||||||||| |||| Sbjct: 3478 cagttcatgatggtgtggcagcggaacag 3506
>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12 Length = 349346 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 322 cagttcttgatggtgtggcagcggtacag 350 |||||| ||||||||||||||||| |||| Sbjct: 67135 cagttcatgatggtgtggcagcggaacag 67163
>gb|AC159305.3| Mus musculus BAC clone RP23-205D10 from chromosome 6, complete sequence Length = 209064 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 taataattaataagtttatga 23 ||||||||||||||||||||| Sbjct: 13345 taataattaataagtttatga 13365
>emb|CR937102.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 3-prime end of clone KW0AAB2YO05BBM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 715 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 319 gtgcagttcttgatggtgtggcagcggta 347 ||||||||| ||||||||||||| ||||| Sbjct: 375 gtgcagttcatgatggtgtggcaccggta 403
>emb|AL832798.1|HSM804109 Homo sapiens genomic DNA; cDNA DKFZp667K1123 (from clone DKFZp667K1123) Length = 3070 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 1419 gctttgcagggttcagcccct 1439
>gb|AC022536.13| Homo sapiens chromosome 10 clone RP11-38M7, complete sequence Length = 160678 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 284 gctttgcagggttcagccccttggg 308 |||||||||||||||||||| |||| Sbjct: 143458 gctttgcagggttcagccccctggg 143434
>gb|AC090605.7| Homo sapiens chromosome 15, clone RP11-261P5, complete sequence Length = 166870 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 53224 gctttgcagggttcagcccct 53204
>gb|AC008492.3| Homo sapiens chromosome 5 clone CTC-427F23, complete sequence Length = 138127 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 44606 gctttgcagggttcagcccct 44586
>gb|AC104445.2| Homo sapiens chromosome 3 clone RP11-444P10, complete sequence Length = 201218 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 183622 gctttgcagggttcagcccct 183602
>gb|AC093295.2| Homo sapiens chromosome 5 clone RP11-535A15, complete sequence Length = 203831 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 94476 gctttgcagggttcagcccct 94496
>gb|AC100800.2| Homo sapiens chromosome 8, clone RP11-161I2, complete sequence Length = 196849 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 59480 gctttgcagggttcagcccct 59460
>gb|AF320597.1|AF320597 Mus musculus C lectin-related protein E pseudogene, partial sequence Length = 19272 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 taataattaataagtttatga 23 ||||||||||||||||||||| Sbjct: 11209 taataattaataagtttatga 11189
>gb|CP000237.1| Neorickettsia sennetsu strain Miyayama, complete genome Length = 859006 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 aaaccaaatggcaggctgatt 198 ||||||||||||||||||||| Sbjct: 327554 aaaccaaatggcaggctgatt 327534
>gb|AC008621.8| Homo sapiens chromosome 5 clone CTB-147K10, complete sequence Length = 67086 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 18114 gctttgcagggttcagcccct 18094
>emb|AJ549502.2|HSA549502 Homo sapiens peptidylarginine deiminase gene locus (PADI12346 genes) Length = 355060 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 98868 gctttgcagggttcagcccct 98848
>gb|AC124915.5| Homo sapiens chromosome 3 clone RP11-717N7, complete sequence Length = 183748 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 89495 gctttgcagggttcagcccct 89475
>gb|AC008486.6|AC008486 Homo sapiens chromosome 5 clone CTC-421B9, complete sequence Length = 124124 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 26566 gctttgcagggttcagcccct 26586
>gb|AC120057.9| Homo sapiens chromosome 17, clone CTD-2545G14, complete sequence Length = 198821 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 21873 gctttgcagggttcagcccct 21893
>gb|AC068660.3|AC068660 Homo sapiens chromosome 5 clone CTC-349J2, complete sequence Length = 172188 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 146516 gctttgcagggttcagcccct 146496
>gb|AC096734.3| Homo sapiens BAC clone RP11-109E24 from 4, complete sequence Length = 179753 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 168378 gctttgcagggttcagcccct 168398
>gb|AC108037.3| Homo sapiens BAC clone RP11-168E17 from 4, complete sequence Length = 73477 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 18137 gctttgcagggttcagcccct 18117
>gb|AC068276.7| Homo sapiens BAC clone RP11-127H13 from 2, complete sequence Length = 163719 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 149192 gctttgcagggttcagcccct 149172
>gb|AC012077.4|AC012077 Homo sapiens BAC clone RP11-524G14 from Y, complete sequence Length = 209287 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 78471 gctttgcagggttcagcccct 78491
>gb|AC074213.7| Homo sapiens BAC clone RP11-34K3 from 2, complete sequence Length = 176539 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 127768 gctttgcagggttcagcccct 127748
>gb|AC062016.5| Homo sapiens BAC clone RP11-59P4 from 2, complete sequence Length = 187799 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 33962 gctttgcagggttcagcccct 33982
>gb|AC079465.5| Homo sapiens chromosome 5 clone CTD-2124P24, complete sequence Length = 184585 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 30332 gctttgcagggttcagcccct 30312
>gb|AC133134.2| Homo sapiens chromosome 5 clone RP11-120B7, complete sequence Length = 148711 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 26703 gctttgcagggttcagcccct 26723
>emb|CT806423.2| Pan troglodytes chromosome X clone CH251-25B01 map Xq28, complete sequence Length = 220032 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 72586 gctttgcagggttcagcccct 72566
>emb|AL160314.7|CNS01RH3 Human chromosome 14 DNA sequence BAC C-2555K7 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 208953 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 135327 gctttgcagggttcagcccct 135347
>gb|AC174446.2| Mus musculus BAC clone RP23-356N23 from chromosome 6, complete sequence Length = 193034 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 taataattaataagtttatga 23 ||||||||||||||||||||| Sbjct: 74780 taataattaataagtttatga 74760
>gb|AC153486.6| Mus musculus 6 BAC RP23-27E5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 213560 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 gaaccaccaaactagatacag 75 ||||||||||||||||||||| Sbjct: 1380 gaaccaccaaactagatacag 1400
>gb|AC004072.1|AC004072 Human Chromosome X clone bWXD342, complete sequence Length = 170658 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccct 304 ||||||||||||||||||||| Sbjct: 135581 gctttgcagggttcagcccct 135561
>ref|NM_113653.2| Arabidopsis thaliana SDH2-1 AT3G27380 (SDH2-1) mRNA, complete cds Length = 1176 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 337 tggcagcggtacagcttgaactcgtcgt 364 ||||| ||||| |||||||||||||||| Sbjct: 842 tggcaacggtaaagcttgaactcgtcgt 815
>ref|NM_123430.1| Arabidopsis thaliana SDH2-2 AT5G40650 (SDH2-2) mRNA, complete cds Length = 1132 Score = 40.1 bits (20), Expect = 6.4 Identities = 80/100 (80%) Strand = Plus / Minus Query: 334 gtgtggcagcggtacagcttgaactcgtcgttgatggagtcaaggcgctcctttgtgaac 393 |||||||| || ||||| |||||||| |||| |||| ||||| | ||||| ||| || Sbjct: 813 gtgtggcatcgatacagtttgaactcatcgtcaatggcttcaagtctttccttagtgtac 754 Query: 394 tcatcacggctgtcttggatccacctgttggcatggagca 433 ||||| ||||| || ||||||||||||||||| |||| Sbjct: 753 tcatctcggctatcacttatccacctgttggcatgaagca 714
>ref|XM_480600.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3143 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 ccacctgttggcatggagca 433 |||||||||||||||||||| Sbjct: 2723 ccacctgttggcatggagca 2742
>ref|NM_213191.1| Danio rerio zgc:77067 (zgc:77067), mRNA Length = 1418 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 tccgacatctccacgggggaagac 229 |||| ||||||||||||||||||| Sbjct: 119 tccgtcatctccacgggggaagac 96
>gb|AY735609.1| Arabidopsis thaliana chromosome 3 hypothetical protein AT3G27370 mRNA, complete cds, alternatively spliced Length = 2486 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 337 tggcagcggtacagcttgaactcgtcgt 364 ||||| ||||| |||||||||||||||| Sbjct: 803 tggcaacggtaaagcttgaactcgtcgt 776
>gb|AY735608.1| Arabidopsis thaliana chromosome 3 hypothetical protein AT3G27370 mRNA, complete cds, alternatively spliced Length = 2382 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 337 tggcagcggtacagcttgaactcgtcgt 364 ||||| ||||| |||||||||||||||| Sbjct: 801 tggcaacggtaaagcttgaactcgtcgt 774
>gb|AC115301.7| Mus musculus BAC clone RP24-83E2 from chromosome 7, complete sequence Length = 175603 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 attaataagtttatgaatta 27 |||||||||||||||||||| Sbjct: 90 attaataagtttatgaatta 71
>gb|AC147092.3| Pan troglodytes BAC clone RP43-55E11 from 7, complete sequence Length = 153171 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 25414 gctttgcagggttcagcccc 25395
>gb|AC112143.5| Mus musculus BAC clone RP23-29E2 from chromosome 2, complete sequence Length = 205920 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 gaaaccatggagcaaaaaca 178 |||||||||||||||||||| Sbjct: 14976 gaaaccatggagcaaaaaca 14995
>ref|XM_752668.1| Ustilago maydis 521 hypothetical protein (UM01614.1) partial mRNA Length = 2748 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 cagcttgaactcgtcgttga 367 |||||||||||||||||||| Sbjct: 2397 cagcttgaactcgtcgttga 2378
>gb|AC127349.3| Mus musculus BAC clone RP23-62M5 from chromosome 13, complete sequence Length = 193255 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tctggtagcaattattcact 111 |||||||||||||||||||| Sbjct: 58490 tctggtagcaattattcact 58509
>gb|AC092989.6| Homo sapiens 3 BAC RP11-237P21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168492 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 323 agttcttgatggtgtggcagcggtacag 350 ||||| |||||||||||||| ||||||| Sbjct: 150708 agttcatgatggtgtggcagtggtacag 150681
>gb|AC006000.3| Homo sapiens PAC clone RP4-741M6 from 7, complete sequence Length = 124170 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 25195 gctttgcagggttcagcccc 25214
>ref|XM_662081.1| Cryptosporidium hominis TU502 WD repeat protein (Chro.20305) partial mRNA Length = 3018 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 tggagcaaaaacaaaccaaa 185 |||||||||||||||||||| Sbjct: 1929 tggagcaaaaacaaaccaaa 1948
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 gagctgcagcttctttattg 274 |||||||||||||||||||| Sbjct: 3421882 gagctgcagcttctttattg 3421901
>emb|CR383667.11| Zebrafish DNA sequence from clone CH211-229P19 in linkage group 10, complete sequence Length = 121560 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 tccgacatctccacgggggaagac 229 |||| ||||||||||||||||||| Sbjct: 8414 tccgtcatctccacgggggaagac 8391
>gb|AC138015.24| Medicago truncatula clone mth2-34m6, complete sequence Length = 126845 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 gaaccaccaaactagataca 74 |||||||||||||||||||| Sbjct: 36796 gaaccaccaaactagataca 36815
>gb|AC090618.11| Homo sapiens chromosome 17, clone RP11-763E3, complete sequence Length = 195031 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 55609 gctttgcagggttcagcccc 55628
>emb|AL929302.16| Human DNA sequence from clone RP11-716A19 on chromosome X Contains the 3' end of the CXorf15 gene for chromosome X open reading frame 15, the RBBP7 gene for retinoblastoma binding protein 7, the 5' end of the REPS2 gene for RALBP1 associated Eps domain containing 2, a novel pseudogene and four CpG islands, complete sequence Length = 172614 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 128817 gctttgcagggttcagcccc 128836
>emb|AL627317.7| Human DNA sequence from clone RP11-316C12 on chromosome 1 Contains the 3' end of the NEGR1 gene for neuronal growth regulator 1 and a novel gene, complete sequence Length = 93633 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 10834 gctttgcagggttcagcccc 10815
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 gcagttcttgatggtgtggcagcg 344 ||||||| |||||||||||||||| Sbjct: 552269 gcagttcatgatggtgtggcagcg 552292
>gb|BT010276.1| Drosophila melanogaster RE08772 full insert cDNA Length = 3821 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 tacagcttgaactcgtcgtt 365 |||||||||||||||||||| Sbjct: 1071 tacagcttgaactcgtcgtt 1052
>emb|AL356603.11| Human DNA sequence from clone RP11-500B2 on chromosome 10 Contains part of the INPP5A gene for inositol polyphosphate-5-phosphatase 40kDa and two CpG islands, complete sequence Length = 112648 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 54516 gctttgcagggttcagcccc 54535
>emb|AL353790.15| Human DNA sequence from clone RP11-337N19 on chromosome 10 Contains an S-adenosylmethionine decarboxylase proenzyme (AdoMetDC) (SamDC) pseudogene, complete sequence Length = 119555 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 31484 gctttgcagggttcagcccc 31503
>emb|AL353707.14| Human DNA sequence from clone RP11-553J6 on chromosome 9 Contains a ribosomal protein S19 (RPS19) pseudogene, complete sequence Length = 125373 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 24852 gctttgcagggttcagcccc 24833
>emb|AL158194.16| Human DNA sequence from clone RP11-429E17 on chromosome 13q13.1-14.2 Contains part of the LHFP gene for lipoma HMGIC fusion partner, complete sequence Length = 177019 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 84576 gctttgcagggttcagcccc 84557
>emb|AL158070.11| Human DNA sequence from clone RP11-235C23 on chromosome 9q31.1-31.3 Contains part of a pseudogene similar to KIAA1272, KIAA0884, Drosophila CG5521 and rat Tulip 1 and 2 proteins, the 3' end of the CSDUFD1 gene for cystatin and DUF19 domain containing 1, a novel gene, the FCMD gene for Fukuyama type congenital muscular dystrophy protein, the TAL2 gene for T-cell acute lymphocytic leukemia 2 protein and two CpG islands, complete sequence Length = 167005 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 71022 gctttgcagggttcagcccc 71041
>gb|AC104010.21| Homo sapiens chromosome 11, clone RP11-244C20, complete sequence Length = 63480 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 20753 gctttgcagggttcagcccc 20772
>emb|AL139233.8| Human DNA sequence from clone RP1-44A19 on chromosome 6q15-16.2, complete sequence Length = 105596 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 38823 gctttgcagggttcagcccc 38842
>emb|AL121968.10|HSJ196B13 Human DNA sequence from clone RP1-196B13 on chromosome 6q22.2-22.33 Contains part of the TCBA1 gene for T-cell lymphoma breakpoint associated target 1, complete sequence Length = 124219 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 ttaataagtttatgaattac 28 |||||||||||||||||||| Sbjct: 13864 ttaataagtttatgaattac 13845
>emb|AL121942.9|HSDJ249N8 Human DNA sequence from clone RP1-249N8 on chromosome 6q14.3-16.1, complete sequence Length = 83909 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 70912 gctttgcagggttcagcccc 70931
>emb|AL050403.16|HSDJ697P8 Human DNA sequence from clone RP4-697P8 on chromosome 20 Contains two novel genes and the FAT1P1 gene for FAT tumour suppressor homolog 1 (Drosophila) pseudogene 1, complete sequence Length = 144924 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 catggagcaaaaacaaacca 183 |||||||||||||||||||| Sbjct: 111374 catggagcaaaaacaaacca 111355
>gb|AY123036.1| Arabidopsis thaliana putative succinate dehydrogenase iron-protein subunit (At5g40650) mRNA, complete cds Length = 874 Score = 40.1 bits (20), Expect = 6.4 Identities = 80/100 (80%) Strand = Plus / Minus Query: 334 gtgtggcagcggtacagcttgaactcgtcgttgatggagtcaaggcgctcctttgtgaac 393 |||||||| || ||||| |||||||| |||| |||| ||||| | ||||| ||| || Sbjct: 755 gtgtggcatcgatacagtttgaactcatcgtcaatggcttcaagtctttccttagtgtac 696 Query: 394 tcatcacggctgtcttggatccacctgttggcatggagca 433 ||||| ||||| || ||||||||||||||||| |||| Sbjct: 695 tcatctcggctatcacttatccacctgttggcatgaagca 656
>gb|AY074299.1| Arabidopsis thaliana putative succinate dehydrogenase iron-protein subunit (At5g40650) mRNA, complete cds Length = 1043 Score = 40.1 bits (20), Expect = 6.4 Identities = 80/100 (80%) Strand = Plus / Minus Query: 334 gtgtggcagcggtacagcttgaactcgtcgttgatggagtcaaggcgctcctttgtgaac 393 |||||||| || ||||| |||||||| |||| |||| ||||| | ||||| ||| || Sbjct: 761 gtgtggcatcgatacagtttgaactcatcgtcaatggcttcaagtctttccttagtgtac 702 Query: 394 tcatcacggctgtcttggatccacctgttggcatggagca 433 ||||| ||||| || ||||||||||||||||| |||| Sbjct: 701 tcatctcggctatcacttatccacctgttggcatgaagca 662
>gb|AY063053.1| Arabidopsis thaliana putative succinate dehydrogenase iron-protein subunit (At3g27380) mRNA, complete cds Length = 871 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 337 tggcagcggtacagcttgaactcgtcgt 364 ||||| ||||| |||||||||||||||| Sbjct: 755 tggcaacggtaaagcttgaactcgtcgt 728
>gb|AY035013.1| Arabidopsis thaliana putative succinate dehydrogenase iron-protein subunit (At3g27380) mRNA, complete cds Length = 1125 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 337 tggcagcggtacagcttgaactcgtcgt 364 ||||| ||||| |||||||||||||||| Sbjct: 775 tggcaacggtaaagcttgaactcgtcgt 748
>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16 Length = 349315 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 gcagttcttgatggtgtggcagcg 344 ||||||| |||||||||||||||| Sbjct: 241243 gcagttcatgatggtgtggcagcg 241266
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 41 catcaaaatatgatgaaccaccaaacta 68 |||||||||||| |||| |||||||||| Sbjct: 317332 catcaaaatatgttgaatcaccaaacta 317359
>gb|AC159194.3| Mus musculus BAC clone RP23-469D18 from chromosome 7, complete sequence Length = 213870 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 attaataagtttatgaatta 27 |||||||||||||||||||| Sbjct: 42564 attaataagtttatgaatta 42583
>emb|AJ278911.1|ATH278911 Arabidopsis thaliana mRNA for mitochondrial succinate dehydrogenase iron-sulphur subunit (sdh2-2 gene) Length = 1031 Score = 40.1 bits (20), Expect = 6.4 Identities = 80/100 (80%) Strand = Plus / Minus Query: 334 gtgtggcagcggtacagcttgaactcgtcgttgatggagtcaaggcgctcctttgtgaac 393 |||||||| || ||||| |||||||| |||| |||| ||||| | ||||| ||| || Sbjct: 765 gtgtggcatcgatacagtttgaactcatcgtcaatggcttcaagtctttccttagtgtac 706 Query: 394 tcatcacggctgtcttggatccacctgttggcatggagca 433 ||||| ||||| || ||||||||||||||||| |||| Sbjct: 705 tcatctcggctatcacttatccacctgttggcatgaagca 666
>emb|AJ278910.1|ATH278910 Arabidopsis thaliana mRNA for mitochondrial succinate dehydrogenase iron-sulphur subunit (sdh2-1 gene) Length = 1085 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 337 tggcagcggtacagcttgaactcgtcgt 364 ||||| ||||| |||||||||||||||| Sbjct: 767 tggcaacggtaaagcttgaactcgtcgt 740
>gb|AC073531.22| Homo sapiens 12 BAC RP11-802J22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 212172 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 gggaagaccctgctctgctc 241 |||||||||||||||||||| Sbjct: 114223 gggaagaccctgctctgctc 114242
>gb|BC065992.1| Danio rerio zgc:77067, mRNA (cDNA clone MGC:77067 IMAGE:6960102), complete cds Length = 1418 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 tccgacatctccacgggggaagac 229 |||| ||||||||||||||||||| Sbjct: 119 tccgtcatctccacgggggaagac 96
>gb|AC021311.8| Homo sapiens chromosome 8, clone RP11-697L23, complete sequence Length = 151778 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 51723 gctttgcagggttcagcccc 51704
>gb|AC007110.3| Homo sapiens chromosome 6, clone hRPK.472_J_18, complete sequence Length = 148336 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 17136 gctttgcagggttcagcccc 17155
>gb|AC055782.9| Homo sapiens chromosome 15, clone RP11-528P19, complete sequence Length = 172697 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 139134 gctttgcagggttcagcccc 139115
>gb|AC103592.2| Homo sapiens chromosome 1 clone RP11-335E14, complete sequence Length = 197372 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 98528 gctttgcagggttcagcccc 98547
>gb|AC024375.13| Homo sapiens chromosome 15, clone RP11-572A8, complete sequence Length = 163775 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 13902 gctttgcagggttcagcccc 13883
>gb|AC100812.2| Homo sapiens chromosome 8, clone CTD-2532N20, complete sequence Length = 209123 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 141847 gctttgcagggttcagcccc 141828
>gb|AC022420.6| Homo sapiens chromosome 5 clone CTD-2040G12, complete sequence Length = 91924 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 7461 gctttgcagggttcagcccc 7442
>gb|AC143337.27| Medicago truncatula clone mth2-35d19, complete sequence Length = 118139 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 gaaccaccaaactagataca 74 |||||||||||||||||||| Sbjct: 98127 gaaccaccaaactagataca 98108
>gb|AC015922.17| Homo sapiens chromosome 17, clone CTD-3157E16, complete sequence Length = 166584 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 tctgctttgcagggttcagc 300 |||||||||||||||||||| Sbjct: 150239 tctgctttgcagggttcagc 150258
>gb|AC090680.11| Homo sapiens 12 BAC RP11-87P13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 183896 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 150319 gctttgcagggttcagcccc 150300
>gb|AC011424.4| Homo sapiens chromosome 5 clone P1_1242F12, complete sequence Length = 84991 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ctttgcagggttcagcccct 304 |||||||||||||||||||| Sbjct: 38831 ctttgcagggttcagcccct 38850
>ref|NM_138055.1| Drosophila melanogaster CG30419-RA (CG30419), mRNA Length = 1232 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 tacagcttgaactcgtcgtt 365 |||||||||||||||||||| Sbjct: 1072 tacagcttgaactcgtcgtt 1053
>gb|AC069540.6| Homo sapiens chromosome 10 clone RP11-344L13, complete sequence Length = 201182 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 101326 gctttgcagggttcagcccc 101345
>gb|AC182474.3| Pan troglodytes BAC clone CH251-134M22 from chromosome 1, complete sequence Length = 152000 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 141420 gctttgcagggttcagcccc 141401
>gb|AC007538.5| Homo sapiens Xq28 PAC RPCI6-224C24 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 178544 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 142583 gctttgcagggttcagcccc 142602
>gb|AC097654.2| Homo sapiens BAC clone RP11-280K20 from 4, complete sequence Length = 163088 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 71737 gctttgcagggttcagcccc 71756
>gb|DQ123841.1| Agrotis segetum nucleopolyhedrovirus, complete genome Length = 147544 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gataataattaataagttta 20 |||||||||||||||||||| Sbjct: 9476 gataataattaataagttta 9457
>ref|XM_939290.1| PREDICTED: Homo sapiens hypothetical protein LOC650204 (LOC650204), mRNA Length = 306 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 176 gctttgcagggttcagcccc 157
>ref|XM_928326.1| PREDICTED: Homo sapiens hypothetical protein LOC645283 (LOC645283), mRNA Length = 306 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 176 gctttgcagggttcagcccc 157
>ref|XM_685575.1| PREDICTED: Danio rerio similar to nudC domain containing 3 (LOC573178), mRNA Length = 829 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 tccgacatctccacgggggaagac 229 |||| ||||||||||||||||||| Sbjct: 159 tccgtcatctccacgggggaagac 136
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 gcagttcttgatggtgtggcagcg 344 ||||||| |||||||||||||||| Sbjct: 2467105 gcagttcatgatggtgtggcagcg 2467082
>gb|AC034242.6| Homo sapiens chromosome 5 clone CTD-2514M18, complete sequence Length = 221452 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 145193 gctttgcagggttcagcccc 145212
>ref|XM_626488.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd2_2910), partial mRNA Length = 3012 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 tggagcaaaaacaaaccaaa 185 |||||||||||||||||||| Sbjct: 1929 tggagcaaaaacaaaccaaa 1948
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 gcagttcttgatggtgtggcagcg 344 ||||||| |||||||||||||||| Sbjct: 368858 gcagttcatgatggtgtggcagcg 368881
>gb|AC009460.4|AC009460 Drosophila melanogaster, chromosome 2R, region 60B-60C, BAC clone BACR04P18, complete sequence Length = 159455 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 tacagcttgaactcgtcgtt 365 |||||||||||||||||||| Sbjct: 38087 tacagcttgaactcgtcgtt 38106
>gb|AC012167.5|AC012167 Drosophila melanogaster, chromosome 2R, region 60B-60C, BAC clone BACR27M17, complete sequence Length = 164443 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 tacagcttgaactcgtcgtt 365 |||||||||||||||||||| Sbjct: 158692 tacagcttgaactcgtcgtt 158711
>emb|BX005394.8| Zebrafish DNA sequence from clone DKEY-3N15 in linkage group 3, complete sequence Length = 190575 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 aagtttatgaattacttcat 33 |||||||||||||||||||| Sbjct: 39925 aagtttatgaattacttcat 39944
>emb|BX822750.1|CNS0A7S4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB61ZE04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 841 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 337 tggcagcggtacagcttgaactcgtcgt 364 ||||| ||||| |||||||||||||||| Sbjct: 526 tggcaacggtaaagcttgaactcgtcgt 499
>gb|AC013722.8| Homo sapiens BAC clone RP11-299H21 from 2, complete sequence Length = 207576 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 79525 gctttgcagggttcagcccc 79506
>gb|AC013429.12|AC013429 Homo sapiens chromosome 7 clone RP11-199L18, complete sequence Length = 179623 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 144423 gctttgcagggttcagcccc 144404
>gb|AC083863.2|AC083863 Homo sapiens chromosome 7 clone RP11-162O1, complete sequence Length = 179488 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ctttgcagggttcagcccct 304 |||||||||||||||||||| Sbjct: 128517 ctttgcagggttcagcccct 128498
>gb|AC008265.15|AC008265 Homo sapiens chromosome 7 clone RP11-256C24, complete sequence Length = 170537 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 102185 gctttgcagggttcagcccc 102204
>gb|AC019178.7| Homo sapiens BAC clone RP11-235L22 from 2, complete sequence Length = 107330 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 47879 gctttgcagggttcagcccc 47860
>gb|AY087504.1| Arabidopsis thaliana clone 36094 mRNA, complete sequence Length = 1133 Score = 40.1 bits (20), Expect = 6.4 Identities = 80/100 (80%) Strand = Plus / Minus Query: 334 gtgtggcagcggtacagcttgaactcgtcgttgatggagtcaaggcgctcctttgtgaac 393 |||||||| || ||||| |||||||| |||| |||| ||||| | ||||| ||| || Sbjct: 813 gtgtggcatcgatacagtttgaactcatcgtcaatggcttcaagtctttccttagtgtac 754 Query: 394 tcatcacggctgtcttggatccacctgttggcatggagca 433 ||||| ||||| || ||||||||||||||||| |||| Sbjct: 753 tcatctcggctatcacttatccacctgttggcatgaagca 714
>gb|AY086901.1| Arabidopsis thaliana clone 2924 mRNA, complete sequence Length = 1110 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 337 tggcagcggtacagcttgaactcgtcgt 364 ||||| ||||| |||||||||||||||| Sbjct: 841 tggcaacggtaaagcttgaactcgtcgt 814
>gb|AC135628.8| Homo sapiens chromosome 15, clone RP11-883G10, complete sequence Length = 137088 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 27456 gctttgcagggttcagcccc 27437
>gb|AC104777.7| Homo sapiens BAC clone RP11-22J23 from 2, complete sequence Length = 110895 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 17523 gctttgcagggttcagcccc 17542
>gb|AC074338.1|AC074338 Human Chromosome 7 clone RP11-81O10, complete sequence Length = 164192 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ctttgcagggttcagcccct 304 |||||||||||||||||||| Sbjct: 36303 ctttgcagggttcagcccct 36284
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 41 catcaaaatatgatgaaccaccaaacta 68 |||||||||||| |||| |||||||||| Sbjct: 318687 catcaaaatatgttgaatcaccaaacta 318714
>dbj|BS000052.1| Pan troglodytes chromosome 22 clone:RP43-049N07, map 22, complete sequences Length = 180152 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gctttgcagggttcagcccc 303 |||||||||||||||||||| Sbjct: 160511 gctttgcagggttcagcccc 160492 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,515,787 Number of Sequences: 3902068 Number of extensions: 4515787 Number of successful extensions: 117892 Number of sequences better than 10.0: 270 Number of HSP's better than 10.0 without gapping: 266 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 117011 Number of HSP's gapped (non-prelim): 876 length of query: 473 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 451 effective length of database: 17,147,199,772 effective search space: 7733387097172 effective search space used: 7733387097172 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
