>TRF_MANSE (P22297) Transferrin precursor|
          Length = 681

 Score = 32.7 bits (73), Expect = 0.46
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +1

Query: 217 LHALFHDTVNQIDLPTYSTAALEKKRHLSGILQYRN*DNCASSHQ*PNSFHNPI 378
           LH +FH+   ++  P Y+ A ++K    + I   R   +C SS+   +  H P+
Sbjct: 439 LHPVFHEVYGELKTPNYAVAVVKKGTAYNKIDDLRGKKSCHSSYSTFSGLHAPL 492

>HFQ_WIGBR (Q8D317) Protein hfq|
          Length = 87

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = +2

Query: 278 LLRKNAIFRGSFNTEIKITVPHHTNDQTHSTTRFCNS 388
           +L KN+I +  +   I   VP+HTN+Q H+ +++ N+
Sbjct: 44  ILLKNSISQMIYKHAISTVVPNHTNNQEHNQSQYNNN 80

>APP1_SCHPO (Q9P7E8) Protein app1|
          Length = 857

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +3

Query: 342 ITPMTKLIPQPDSVTPEKRRITSLNPL 422
           +TP+TKL PQP S +P K+ ++ L  L
Sbjct: 303 LTPLTKLEPQPPSGSPSKKPVSELEEL 329

>DKK4_MOUSE (Q8VEJ3) Dickkopf-related protein 4 precursor (Dkk-4) (Dickkopf-4)|
          Length = 221

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = -2

Query: 189 FLSRLAGRLLRVDVVWNAEDWKKLSCISLCHSQRVLFTVFYCM-FHQHKTFCASC 28
           F S LA  +L  + + ++ D +     SLC S R      +C+ FH  ++FCA+C
Sbjct: 12  FCSPLAALVLDFNNIKSSADVQGAGKGSLCASDRDCSEGKFCLAFHDERSFCATC 66

>FCTA_RHOPA (Q6N8F8) Probable formyl-coenzyme A transferase (EC 2.8.3.16)|
           (Formyl-CoA transferase)
          Length = 425

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
 Frame = -1

Query: 430 AKTSGFREVIRLFSG--VTESGCGMSLVIGVMRHSY 329
           A T+GFRE + L +G  + +SG G+ L +G++   Y
Sbjct: 149 ASTTGFREGLPLVTGAQIGDSGTGLHLALGIVTALY 184

>Y3408_METJA (Q60307) Hypothetical protein MJECS08|
          Length = 1064

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 13/53 (24%), Positives = 27/53 (50%)
 Frame = -1

Query: 301 KDGVFSQELPCCMWEGRFGSRYHGTVHEVVYLHDSTKISVKISWKAVES*CGL 143
           +DG    E   C++ G +G     T+  +  LH++T+  +++    +E+  GL
Sbjct: 621 RDGHLKPETIDCLFIGSYGQGKSLTIEPLAKLHNTTEDMIRVDMPNIENLIGL 673


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,463,239
Number of Sequences: 219361
Number of extensions: 1507374
Number of successful extensions: 3671
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3670
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)