ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart29b06 |
|---|---|
| Clone Library Name | barley_pub |
>IDHP_MEDSA (Q40345) Isocitrate dehydrogenase [NADP], chloroplast precursor (EC| 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (Fragment) Length = 433 Score = 144 bits (364), Expect = 1e-34 Identities = 72/87 (82%), Positives = 79/87 (90%) Frame = -3 Query: 495 VHQKGGETSTNSIASIFAWTRGLAHRAMLDDNARLLEFAQKLEEACVGTVESGKMTKDLA 316 VHQKGGETSTNSIASIFAWTRGLAHRA LDDNA LL+F +KLE AC+G VESGKMTKDLA Sbjct: 341 VHQKGGETSTNSIASIFAWTRGLAHRAKLDDNATLLDFTEKLEAACIGVVESGKMTKDLA 400 Query: 315 LLVHGSSKVTRSDYLNTEEFIDAVAAE 235 L++HG SK++R YLNTEEFIDAVAAE Sbjct: 401 LILHG-SKLSREHYLNTEEFIDAVAAE 426
>IDHC_SOYBN (Q06197) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 413 Score = 144 bits (364), Expect = 1e-34 Identities = 71/87 (81%), Positives = 80/87 (91%) Frame = -3 Query: 495 VHQKGGETSTNSIASIFAWTRGLAHRAMLDDNARLLEFAQKLEEACVGTVESGKMTKDLA 316 VHQKGGETSTNSIASIFAWTRGLAHRA LDDNA+LL+F +KLE AC+G VE+GKMTKDLA Sbjct: 321 VHQKGGETSTNSIASIFAWTRGLAHRAKLDDNAKLLDFTEKLEAACIGVVEAGKMTKDLA 380 Query: 315 LLVHGSSKVTRSDYLNTEEFIDAVAAE 235 L++HG SK++R YLNTEEFIDAVAAE Sbjct: 381 LILHG-SKLSREHYLNTEEFIDAVAAE 406
>IDHC_TOBAC (P50218) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 415 Score = 141 bits (356), Expect = 8e-34 Identities = 70/87 (80%), Positives = 78/87 (89%) Frame = -3 Query: 495 VHQKGGETSTNSIASIFAWTRGLAHRAMLDDNARLLEFAQKLEEACVGTVESGKMTKDLA 316 VHQKGGETSTNSIASIFAWTRGLAHRA LD+N RLL+F +KLE AC+G VESGKMTKDLA Sbjct: 320 VHQKGGETSTNSIASIFAWTRGLAHRATLDNNERLLDFTEKLEAACIGAVESGKMTKDLA 379 Query: 315 LLVHGSSKVTRSDYLNTEEFIDAVAAE 235 L++HG SK++R YLNTEEFIDAVA E Sbjct: 380 LIIHG-SKLSRDHYLNTEEFIDAVADE 405
>IDHC_SOLTU (P50217) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 416 Score = 139 bits (349), Expect = 5e-33 Identities = 68/87 (78%), Positives = 76/87 (87%) Frame = -3 Query: 495 VHQKGGETSTNSIASIFAWTRGLAHRAMLDDNARLLEFAQKLEEACVGTVESGKMTKDLA 316 VHQKGGETSTNSIASIFAWTRGLAHRA LD+N RLL+F +KLE AC+G VESGKMTKDLA Sbjct: 320 VHQKGGETSTNSIASIFAWTRGLAHRATLDNNERLLDFTEKLEAACIGAVESGKMTKDLA 379 Query: 315 LLVHGSSKVTRSDYLNTEEFIDAVAAE 235 L++ SK++R YLNTEEFIDAVA E Sbjct: 380 LIIIHGSKLSREHYLNTEEFIDAVADE 406
>IDHC_MICOH (Q9Z2K8) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 110 bits (274), Expect = 3e-24 Identities = 54/82 (65%), Positives = 63/82 (76%) Frame = -3 Query: 495 VHQKGGETSTNSIASIFAWTRGLAHRAMLDDNARLLEFAQKLEEACVGTVESGKMTKDLA 316 +HQKG ETSTN IASIFAW+RGLAHRA LD+N L FA+ LEE C+ T+E+G MTKDLA Sbjct: 318 MHQKGQETSTNPIASIFAWSRGLAHRARLDNNTELSFFAKALEEVCIETIEAGFMTKDLA 377 Query: 315 LLVHGSSKVTRSDYLNTEEFID 250 + G V RSDYLNT EF+D Sbjct: 378 ACIKGLPNVQRSDYLNTFEFMD 399
>IDHC_MICME (Q9Z2K9) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 110 bits (274), Expect = 3e-24 Identities = 54/82 (65%), Positives = 63/82 (76%) Frame = -3 Query: 495 VHQKGGETSTNSIASIFAWTRGLAHRAMLDDNARLLEFAQKLEEACVGTVESGKMTKDLA 316 +HQKG ETSTN IASIFAW+RGLAHRA LD+N L FA+ LEE C+ T+E+G MTKDLA Sbjct: 318 MHQKGQETSTNPIASIFAWSRGLAHRARLDNNTELSFFAKALEEVCIETIEAGFMTKDLA 377 Query: 315 LLVHGSSKVTRSDYLNTEEFID 250 + G V RSDYLNT EF+D Sbjct: 378 ACIKGLPNVQRSDYLNTFEFMD 399
>IDHC_RAT (P41562) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 107 bits (267), Expect = 2e-23 Identities = 53/82 (64%), Positives = 62/82 (75%) Frame = -3 Query: 495 VHQKGGETSTNSIASIFAWTRGLAHRAMLDDNARLLEFAQKLEEACVGTVESGKMTKDLA 316 ++QKG ETSTN IASIFAW+RGLAHRA LD+N L FA LEE C+ T+E+G MTKDLA Sbjct: 318 MYQKGQETSTNPIASIFAWSRGLAHRAKLDNNTELSFFANALEEVCIETIEAGFMTKDLA 377 Query: 315 LLVHGSSKVTRSDYLNTEEFID 250 + G V RSDYLNT EF+D Sbjct: 378 ACIKGLPNVQRSDYLNTFEFMD 399
>IDHC_MOUSE (O88844) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 106 bits (265), Expect = 3e-23 Identities = 52/82 (63%), Positives = 63/82 (76%) Frame = -3 Query: 495 VHQKGGETSTNSIASIFAWTRGLAHRAMLDDNARLLEFAQKLEEACVGTVESGKMTKDLA 316 ++QKG ETSTN IASIFAW+RGLAHRA LD+N L FA+ LE+ C+ T+E+G MTKDLA Sbjct: 318 MYQKGQETSTNPIASIFAWSRGLAHRAKLDNNTELSFFAKALEDVCIETIEAGFMTKDLA 377 Query: 315 LLVHGSSKVTRSDYLNTEEFID 250 + G V RSDYLNT EF+D Sbjct: 378 ACIKGLPNVQRSDYLNTFEFMD 399
>IDHC_HUMAN (O75874) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 105 bits (261), Expect = 9e-23 Identities = 53/82 (64%), Positives = 61/82 (74%) Frame = -3 Query: 495 VHQKGGETSTNSIASIFAWTRGLAHRAMLDDNARLLEFAQKLEEACVGTVESGKMTKDLA 316 ++QKG ETSTN IASIFAWTRGLAHRA LD+N L FA LEE + T+E+G MTKDLA Sbjct: 318 MYQKGQETSTNPIASIFAWTRGLAHRAKLDNNKELAFFANALEEVSIETIEAGFMTKDLA 377 Query: 315 LLVHGSSKVTRSDYLNTEEFID 250 + G V RSDYLNT EF+D Sbjct: 378 ACIKGLPNVQRSDYLNTFEFMD 399
>IDHP_BOVIN (Q04467) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) Length = 452 Score = 103 bits (256), Expect = 3e-22 Identities = 52/84 (61%), Positives = 61/84 (72%), Gaps = 1/84 (1%) Frame = -3 Query: 492 HQKGGETSTNSIASIFAWTRGLAHRAMLDDNARLLEFAQKLEEACVGTVESGKMTKDLAL 313 HQKG TSTN IASIFAWTRGL HR LD N L+ FAQ LE+ CV TVESG MTKDLA Sbjct: 358 HQKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQTLEKVCVETVESGAMTKDLAG 417 Query: 312 LVHGSSKVTRSD-YLNTEEFIDAV 244 +HG S V ++ +LNT +F+D + Sbjct: 418 CIHGLSNVKLNEHFLNTSDFLDTI 441
>IDHP_PIG (P33198) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) (Fragment) Length = 421 Score = 103 bits (256), Expect = 3e-22 Identities = 52/84 (61%), Positives = 61/84 (72%), Gaps = 1/84 (1%) Frame = -3 Query: 492 HQKGGETSTNSIASIFAWTRGLAHRAMLDDNARLLEFAQKLEEACVGTVESGKMTKDLAL 313 HQKG TSTN IASIFAWTRGL HR LD N L+ FAQ LE+ CV TVESG MTKDLA Sbjct: 327 HQKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQTLEKVCVETVESGAMTKDLAG 386 Query: 312 LVHGSSKVTRSD-YLNTEEFIDAV 244 +HG S V ++ +LNT +F+D + Sbjct: 387 CIHGLSNVKLNEHFLNTSDFLDTI 410
>IDHP_HUMAN (P48735) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) Length = 452 Score = 102 bits (255), Expect = 4e-22 Identities = 52/84 (61%), Positives = 61/84 (72%), Gaps = 1/84 (1%) Frame = -3 Query: 492 HQKGGETSTNSIASIFAWTRGLAHRAMLDDNARLLEFAQKLEEACVGTVESGKMTKDLAL 313 HQKG TSTN IASIFAWTRGL HR LD N L+ FAQ LE+ CV TVESG MTKDLA Sbjct: 358 HQKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQMLEKVCVETVESGAMTKDLAG 417 Query: 312 LVHGSSKVTRSD-YLNTEEFIDAV 244 +HG S V ++ +LNT +F+D + Sbjct: 418 CIHGLSNVKLNEHFLNTTDFLDTI 441
>IDH_MYCTU (P65097) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 409 Score = 95.9 bits (237), Expect = 5e-20 Identities = 48/84 (57%), Positives = 59/84 (70%) Frame = -3 Query: 492 HQKGGETSTNSIASIFAWTRGLAHRAMLDDNARLLEFAQKLEEACVGTVESGKMTKDLAL 313 +Q G TSTN IASIFAWTRGL HR LD +++FA KLE + TVESGKMTKDLA+ Sbjct: 322 YQAGKPTSTNPIASIFAWTRGLQHRGKLDGTPEVIDFAHKLESVVIATVESGKMTKDLAI 381 Query: 312 LVHGSSKVTRSDYLNTEEFIDAVA 241 L+ D+LN+EEF+DA+A Sbjct: 382 LIG-----PEQDWLNSEEFLDAIA 400
>IDH_MYCBO (P65098) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 409 Score = 95.9 bits (237), Expect = 5e-20 Identities = 48/84 (57%), Positives = 59/84 (70%) Frame = -3 Query: 492 HQKGGETSTNSIASIFAWTRGLAHRAMLDDNARLLEFAQKLEEACVGTVESGKMTKDLAL 313 +Q G TSTN IASIFAWTRGL HR LD +++FA KLE + TVESGKMTKDLA+ Sbjct: 322 YQAGKPTSTNPIASIFAWTRGLQHRGKLDGTPEVIDFAHKLESVVIATVESGKMTKDLAI 381 Query: 312 LVHGSSKVTRSDYLNTEEFIDAVA 241 L+ D+LN+EEF+DA+A Sbjct: 382 LIG-----PEQDWLNSEEFLDAIA 400
>IDHP_SCHPO (O14254) Probable isocitrate dehydrogenase [NADP], mitochondrial| precursor (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 418 Score = 93.6 bits (231), Expect = 3e-19 Identities = 51/84 (60%), Positives = 60/84 (71%) Frame = -3 Query: 486 KGGETSTNSIASIFAWTRGLAHRAMLDDNARLLEFAQKLEEACVGTVESGKMTKDLALLV 307 KG +TSTNSIASIFAWTRGLAHR LD N RL++FA LE ACV VE G MTKDL LL Sbjct: 331 KGKKTSTNSIASIFAWTRGLAHRGRLDGNERLVKFANALEHACVRCVEKGIMTKDLYLL- 389 Query: 306 HGSSKVTRSDYLNTEEFIDAVAAE 235 + + Y++T EF+DAV +E Sbjct: 390 ----SKSPNGYVDTFEFLDAVKSE 409
>IDH1_CANTR (O13285) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (CtIDP1) Length = 430 Score = 93.2 bits (230), Expect = 3e-19 Identities = 51/85 (60%), Positives = 62/85 (72%), Gaps = 1/85 (1%) Frame = -3 Query: 492 HQKGGETSTNSIASIFAWTRGLAHRAMLDDNARLLEFAQKLEEACVGTVESGK-MTKDLA 316 HQ+G ETSTNSIASIFAWTRGLA R LD+ +++FA KLE+A + TVE + MTKDLA Sbjct: 344 HQQGKETSTNSIASIFAWTRGLAQRGKLDETPDVVDFASKLEQATIDTVEVDRIMTKDLA 403 Query: 315 LLVHGSSKVTRSDYLNTEEFIDAVA 241 L + K RS Y+ T EF+DAVA Sbjct: 404 LAM---GKTDRSAYVTTTEFLDAVA 425
>IDHP_MOUSE (P54071) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) Length = 523 Score = 92.4 bits (228), Expect = 6e-19 Identities = 49/84 (58%), Positives = 58/84 (69%), Gaps = 1/84 (1%) Frame = -3 Query: 492 HQKGGETSTNSIASIFAWTRGLAHRAMLDDNARLLEFAQKLEEACVGTVESGKMTKDLAL 313 HQKG TST IASIFAWTRGL HR LD N L+ FAQ E+ CV TVE G MTKDLA Sbjct: 430 HQKGRPTSTKGIASIFAWTRGLEHRGKLDGNQDLIRFAQTREKVCVQTVE-GAMTKDLAG 488 Query: 312 LVHGSSKVTRSD-YLNTEEFIDAV 244 +HG S V ++ +LNT +F+D + Sbjct: 489 CIHGLSNVKLNEHFLNTTDFLDTI 512
>IDH2_CANTR (O13294) Isocitrate dehydrogenase [NADP] peroxisomal (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (PS-NADP-IDH) (CtIDP2) Length = 410 Score = 90.5 bits (223), Expect = 2e-18 Identities = 49/85 (57%), Positives = 59/85 (69%), Gaps = 1/85 (1%) Frame = -3 Query: 492 HQKGGETSTNSIASIFAWTRGLAHRAMLDDNARLLEFAQKLEEACVGTVESGK-MTKDLA 316 HQ+G ETSTNSIASI+AWTRGL R LDD +++FA++LE+A + TV MTKDLA Sbjct: 320 HQQGKETSTNSIASIYAWTRGLIQRGKLDDTPEVVKFAEELEKAVIETVSKDNIMTKDLA 379 Query: 315 LLVHGSSKVTRSDYLNTEEFIDAVA 241 L K RS Y+ TEEFID VA Sbjct: 380 LT---QGKTDRSSYVTTEEFIDGVA 401
>IDHC_YEAST (P41939) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 412 Score = 90.5 bits (223), Expect = 2e-18 Identities = 51/84 (60%), Positives = 60/84 (71%), Gaps = 1/84 (1%) Frame = -3 Query: 492 HQKGGETSTNSIASIFAWTRGLAHRAMLDDNARLLEFAQKLEEACVGTV-ESGKMTKDLA 316 HQ+G ETSTNSIASIFAWTRG+ R LD+ +++F Q LE A V TV E G MTKDLA Sbjct: 319 HQQGKETSTNSIASIFAWTRGIIQRGKLDNTPDVVKFGQILESATVNTVQEDGIMTKDLA 378 Query: 315 LLVHGSSKVTRSDYLNTEEFIDAV 244 L++ K RS Y+ TEEFIDAV Sbjct: 379 LIL---GKSERSAYVTTEEFIDAV 399
>IDHH_YEAST (P53982) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 420 Score = 89.4 bits (220), Expect = 5e-18 Identities = 48/85 (56%), Positives = 60/85 (70%), Gaps = 1/85 (1%) Frame = -3 Query: 492 HQKGGETSTNSIASIFAWTRGLAHRAMLDDNARLLEFAQKLEEACVGTVE-SGKMTKDLA 316 HQ+G ETSTNSIASIFAWTR + R LD+ +++F LE+A + TV+ GKMTKDLA Sbjct: 319 HQRGEETSTNSIASIFAWTRAIIQRGKLDNTDDVIKFGNLLEKATLDTVQVGGKMTKDLA 378 Query: 315 LLVHGSSKVTRSDYLNTEEFIDAVA 241 L++ K RS Y+ TEEFID VA Sbjct: 379 LML---GKTNRSSYVTTEEFIDEVA 400
>IDH_SPHYA (P50215) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 406 Score = 84.0 bits (206), Expect = 2e-16 Identities = 41/83 (49%), Positives = 56/83 (67%) Frame = -3 Query: 492 HQKGGETSTNSIASIFAWTRGLAHRAMLDDNARLLEFAQKLEEACVGTVESGKMTKDLAL 313 HQ+G TSTN IASIFAWT+GL+ R DD +++FA+ LE+ C+ TVE G MTKDLAL Sbjct: 317 HQQGKATSTNPIASIFAWTQGLSFRGKFDDTPDVVKFAETLEQVCIKTVEGGAMTKDLAL 376 Query: 312 LVHGSSKVTRSDYLNTEEFIDAV 244 L+ ++ TE+F +A+ Sbjct: 377 LIGPDQA-----WMTTEQFFEAI 394
>IDHP_YEAST (P21954) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 428 Score = 82.4 bits (202), Expect = 6e-16 Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 1/84 (1%) Frame = -3 Query: 492 HQKGGETSTNSIASIFAWTRGLAHRAMLDDNARLLEFAQKLEEACVGTV-ESGKMTKDLA 316 +QKG ETSTNSIASIFAW+RGL R LD+ L +FA LE A + TV + G MTKDLA Sbjct: 336 YQKGEETSTNSIASIFAWSRGLLKRGELDNTPALCKFANILESATLNTVQQDGIMTKDLA 395 Query: 315 LLVHGSSKVTRSDYLNTEEFIDAV 244 L + RS Y+ TEEF+DAV Sbjct: 396 LACGNNE---RSAYVTTEEFLDAV 416
>IDHP_ASPNG (P79089) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 498 Score = 78.6 bits (192), Expect = 9e-15 Identities = 43/84 (51%), Positives = 55/84 (65%), Gaps = 1/84 (1%) Frame = -3 Query: 492 HQKGGETSTNSIASIFAWTRGLAHRAMLDDNARLLEFAQKLEEACVGTV-ESGKMTKDLA 316 HQKG ETSTN IASIFAWTRGL R LD+ ++ FA++LE AC+ V + G MTKDLA Sbjct: 406 HQKGRETSTNPIASIFAWTRGLIQRGKLDETPDVVTFAEELERACIEVVNDEGIMTKDLA 465 Query: 315 LLVHGSSKVTRSDYLNTEEFIDAV 244 L + R ++ T E++ AV Sbjct: 466 L---ACGRKEREAWVTTREYMAAV 486
>VCAM1_RAT (P29534) Vascular cell adhesion protein 1 precursor (V-CAM 1)| Length = 739 Score = 29.6 bits (65), Expect = 4.7 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 6/56 (10%) Frame = -3 Query: 441 WTRGLAHRAM--LDDNARLLEFAQKLEEA----CVGTVESGKMTKDLALLVHGSSK 292 W+R L + + L N L A K+E++ C G E+G K + L++ GSSK Sbjct: 546 WSRQLKNGELQPLSQNTTLSFMATKMEDSGIYVCEGINEAGISKKSVELIIQGSSK 601
>IDH3A_RAT (Q99NA5) Isocitrate dehydrogenase [NAD] subunit alpha,| mitochondrial precursor (EC 1.1.1.41) (Isocitric dehydrogenase) (NAD(+)-specific ICDH) Length = 366 Score = 29.3 bits (64), Expect = 6.1 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Frame = -3 Query: 480 GETSTNSIASIFAWTRGLAHRAMLDDNARLLEFAQKLEEACVGTVESGK-MTKDLALLVH 304 G+ N A + + L H + D A K+E AC T++ GK +TKDL Sbjct: 298 GKDMANPTALLLSAVMMLRHMGLFDH-------AAKIEAACFATIKDGKSLTKDLG---- 346 Query: 303 GSSKVTRSDYLNTEE 259 G+SK SD+ TEE Sbjct: 347 GNSKC--SDF--TEE 357
>IDH3A_BOVIN (P41563) Isocitrate dehydrogenase [NAD] subunit alpha,| mitochondrial precursor (EC 1.1.1.41) (Isocitric dehydrogenase) (NAD(+)-specific ICDH) (Isocitrate dehydrogenase subunits 3/4) Length = 366 Score = 29.3 bits (64), Expect = 6.1 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Frame = -3 Query: 480 GETSTNSIASIFAWTRGLAHRAMLDDNARLLEFAQKLEEACVGTVESGK-MTKDLALLVH 304 G+ N A + + L H + D A K+E AC T++ GK +TKDL Sbjct: 298 GKDMANPTALLLSAVMMLRHMGLFDH-------AAKIETACFATIKDGKSLTKDLG---- 346 Query: 303 GSSKVTRSDYLNTEE 259 G+SK SD+ TEE Sbjct: 347 GNSKC--SDF--TEE 357 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,141,389 Number of Sequences: 219361 Number of extensions: 1127354 Number of successful extensions: 2796 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 2746 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2780 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3523384522 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
