>gb|AY105037.1| Zea mays PCO142590 mRNA sequence
          Length = 1053

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 228 cggggccgtagggagctttgctcaccaccctgtcacgacgt 268
           |||||| ||| |||||||||||||| |||||||||||||||
Sbjct: 625 cggggctgtacggagctttgctcacgaccctgtcacgacgt 585

>ref|XM_474157.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 651

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 239 ggagctttgctcaccaccctgtcacg 264
           |||||||||||||||| |||||||||
Sbjct: 578 ggagctttgctcaccaacctgtcacg 553

>gb|AY596593.1| Saccharum officinarum clone SCQGLR1088A06, complete sequence
          Length = 1059

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 207 ccatgccttccgacggcttcccggggccgtagggagctttgctcaccaccctgtcacgac 266
           ||||||| || |||| |||  |||||| ||| ||||| |||||||| | |||||||||||
Sbjct: 376 ccatgccatcggacgacttggcggggctgtatggagccttgctcacgatcctgtcacgac 435

             
Query: 267 gt 268
           ||
Sbjct: 436 gt 437

>dbj|AK069326.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014L02, full
           insert sequence
          Length = 850

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 239 ggagctttgctcaccaccctgtcacg 264
           |||||||||||||||| |||||||||
Sbjct: 522 ggagctttgctcaccaacctgtcacg 497

>dbj|AK059441.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H07, full
           insert sequence
          Length = 881

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 239 ggagctttgctcaccaccctgtcacg 264
           |||||||||||||||| |||||||||
Sbjct: 519 ggagctttgctcaccaacctgtcacg 494

>gb|AY104939.1| Zea mays PCO123637 mRNA sequence
          Length = 1139

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 239 ggagctttgctcaccaccctgtcacg 264
           |||||||||||||| |||||||||||
Sbjct: 700 ggagctttgctcacgaccctgtcacg 675

>gb|AC174480.1| Mus musculus BAC clone RP23-154N2 from chromosome 1, complete sequence
          Length = 207205

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 19     acaacagaacaatgacaatag 39
              |||||||||||||||||||||
Sbjct: 119568 acaacagaacaatgacaatag 119548

>gb|AC171813.2| Mus musculus BAC clone RP23-75G11 from chromosome 1, complete sequence
          Length = 229986

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 19    acaacagaacaatgacaatag 39
             |||||||||||||||||||||
Sbjct: 33863 acaacagaacaatgacaatag 33843

>emb|AL928545.6| Mouse DNA sequence from clone RP23-218A13 on chromosome 2, complete
              sequence
          Length = 199257

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 24     agaacaatgacaatagaggtt 44
              |||||||||||||||||||||
Sbjct: 103289 agaacaatgacaatagaggtt 103309

>dbj|AB168719.1| Macaca fascicularis testis cDNA clone: QtsA-14381, similar to human
           glutamate-ammonia ligase (glutamine synthase)
           (GLUL),mRNA, RefSeq: NM_002065.3
          Length = 2775

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 211 gccttccgacggcttcccggggcc 234
           ||||||| ||||||||||||||||
Sbjct: 573 gccttccaacggcttcccggggcc 596

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 171      ccttcccctccgggaccgcctccatccc 198
                |||||||||||||| |||||||| ||||
Sbjct: 14817536 ccttcccctccgggcccgcctccctccc 14817563

>dbj|AP003856.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0697D09
          Length = 158479

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 171  ccttcccctccgggaccgcctccatccc 198
            |||||||||||||| |||||||| ||||
Sbjct: 2362 ccttcccctccgggcccgcctccctccc 2389

>dbj|AP003021.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0503E05
          Length = 168258

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 171   ccttcccctccgggaccgcctccatccc 198
             |||||||||||||| |||||||| ||||
Sbjct: 53580 ccttcccctccgggcccgcctccctccc 53607

>emb|AL603787.8| Mouse DNA sequence from clone RP23-169J19 on chromosome 11 Contains the
              3' end of a novel gene, the gene for a novel protein
              similar to nascent polypeptide-associated complex alpha
              polypeptide Naca, the Tbrg4 gene for transforming growth
              factor beta regulated gene 4, the Wap gene for whey acidic
              protein, an ethanol induced 6 (Etohi6) pseudogene, two
              novel genes, the Ramp3 gene for receptor (calcitonin)
              activity modifying protein 3, a lactate dehydrogenase 1 A
              chain (Ldh1) pseudogene, a mitochondrial ribosomal protein
              L36 (Mrpl36) pseudogene, a retinoblastoma binding protein 5
              (Rbbp5) pseudogene, a ribosomal protein L7A (Rpl7a)
              pseudogene and two CpG islands, complete sequence
          Length = 225879

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 158    tttgggtactgggccttccc 177
              ||||||||||||||||||||
Sbjct: 183413 tttgggtactgggccttccc 183432


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,166,312
Number of Sequences: 3902068
Number of extensions: 2166312
Number of successful extensions: 42303
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42276
Number of HSP's gapped (non-prelim): 27
length of query: 268
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 246
effective length of database: 17,147,199,772
effective search space: 4218211143912
effective search space used: 4218211143912
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)