ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart29b01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FABF_SHIFL (P0AAI8) 3-oxoacyl-[acyl-carrier-protein] synthase 2 ... 29 5.7
2FABF_ECOLI (P0AAI5) 3-oxoacyl-[acyl-carrier-protein] synthase 2 ... 29 5.7
3FABF_ECOL6 (P0AAI6) 3-oxoacyl-[acyl-carrier-protein] synthase 2 ... 29 5.7
4FABF_ECO57 (P0AAI7) 3-oxoacyl-[acyl-carrier-protein] synthase 2 ... 29 5.7
5SP4B_BACSU (P17896) Stage IV sporulation protein B precursor (EC... 29 7.5
6WNK1_HUMAN (Q9H4A3) Serine/threonine-protein kinase WNK1 (EC 2.7... 28 9.7
7P4HA2_CHICK (Q5ZLK5) Prolyl 4-hydroxylase alpha-2 subunit precur... 28 9.7

>FABF_SHIFL (P0AAI8) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase II)
           (Beta-ketoacyl-ACP synthase II) (KAS II)
          Length = 412

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2

Query: 170 MIVGTEEEHAYKRGLLILTSLQNLGMCKGTKNLTREPD 283
           M+V  E EHA KRG  I   L   GM     ++T  P+
Sbjct: 237 MLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPE 274



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>FABF_ECOLI (P0AAI5) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase II)
           (Beta-ketoacyl-ACP synthase II) (KAS II)
          Length = 412

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2

Query: 170 MIVGTEEEHAYKRGLLILTSLQNLGMCKGTKNLTREPD 283
           M+V  E EHA KRG  I   L   GM     ++T  P+
Sbjct: 237 MLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPE 274



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>FABF_ECOL6 (P0AAI6) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase II)
           (Beta-ketoacyl-ACP synthase II) (KAS II)
          Length = 412

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2

Query: 170 MIVGTEEEHAYKRGLLILTSLQNLGMCKGTKNLTREPD 283
           M+V  E EHA KRG  I   L   GM     ++T  P+
Sbjct: 237 MLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPE 274



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>FABF_ECO57 (P0AAI7) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase II)
           (Beta-ketoacyl-ACP synthase II) (KAS II)
          Length = 412

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2

Query: 170 MIVGTEEEHAYKRGLLILTSLQNLGMCKGTKNLTREPD 283
           M+V  E EHA KRG  I   L   GM     ++T  P+
Sbjct: 237 MLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPE 274



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>SP4B_BACSU (P17896) Stage IV sporulation protein B precursor (EC 3.4.21.-)|
           [Contains: SpoIVB-45 kDa; SpoIVB-43 kDa; SpoIVB-42 kDa]
          Length = 425

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +2

Query: 209 GLLILTSLQNLGMCKGTKNLTREPDIIRHHQTRTE 313
           GL++L SL ++G+CK  K     P  +R  +T+T+
Sbjct: 10  GLILLVSLLSVGLCKPLKEYLLIPTQMRVFETQTQ 44



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>WNK1_HUMAN (Q9H4A3) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1) (Protein|
            kinase with no lysine 1) (Protein kinase,
            lysine-deficient 1) (Kinase deficient protein)
          Length = 2382

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +1

Query: 256  YQEFDPRARYHSSPSDKNRGPSCSLTSFSLHSHLV*SKMPPPRYAEP 396
            YQ F PR      P D N  PS ++ S  +HS ++   MP    A P
Sbjct: 943  YQGFPPRLP-PQYPGDSNIAPSSNVASVCIHSTVLSPPMPTEVLATP 988



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>P4HA2_CHICK (Q5ZLK5) Prolyl 4-hydroxylase alpha-2 subunit precursor (EC|
           1.14.11.2) (4-PH alpha-2)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-2 subunit)
          Length = 534

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +1

Query: 67  KVDTKTWSRRLAANTSHRSKLQADQNLGASKRQYNDCRY 183
           K+D +T SR     T +RS L      G  K  YND  Y
Sbjct: 144 KLDPETLSRGNLPGTKYRSSLTVSDCFGMGKTAYNDGDY 182


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,164,415
Number of Sequences: 219361
Number of extensions: 1125263
Number of successful extensions: 2526
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2520
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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