>B3A2_RABIT (P48746) Anion exchange protein 2 (Non-erythroid band 3-like|
           protein) (AE2 anion exchanger) (Solute carrier family 4
           member 2) (B3RP)
          Length = 1237

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 5/37 (13%)
 Frame = +3

Query: 183 RRNSEGPGEKPRR--PNRPLAFTP---EGKQEEEEKN 278
           R+  +GPG KPRR     P   TP   EG+++EEE N
Sbjct: 96  RKTPQGPGRKPRRRPGASPTGATPTIEEGEEDEEEAN 132

>EBNA1_EBV (P03211) Epstein-Barr nuclear antigen 1 (EBV nuclear antigen 1)|
           (EBNA-1)
          Length = 641

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = +1

Query: 160 RARSASR*GETARGRARNRADRTDPSPSRQKES 258
           RAR  SR  E ARGR R R ++   SPS Q  S
Sbjct: 360 RARGGSR--ERARGRGRGRGEKRPRSPSSQSSS 390

>SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (Suppressor of|
           white-apricot homolog 2)
          Length = 659

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 157 TRARSASR*GETARGRARNRADRTDPSPSRQK 252
           TR+RS S     +R R+R+R+    PSP+R+K
Sbjct: 494 TRSRSHSPSPSQSRSRSRSRSQSPSPSPAREK 525

>B3A2_MOUSE (P13808) Anion exchange protein 2 (Non-erythroid band 3-like|
           protein) (AE2 anion exchanger) (Solute carrier family 4
           member 2) (B3RP)
          Length = 1237

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = +3

Query: 183 RRNSEGPGEKPRR--PNRPLAFTP---EGKQEEEE 272
           R+  +GPG KPRR     P   TP   EG+++EEE
Sbjct: 95  RKTPQGPGRKPRRRPGASPTGETPTIEEGEEDEEE 129

>SNUT3_MOUSE (Q8K194) U4/U6.U5 tri-snRNP-associated protein 3|
          Length = 155

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 16/32 (50%), Positives = 17/32 (53%)
 Frame = +1

Query: 160 RARSASR*GETARGRARNRADRTDPSPSRQKE 255
           R RS SR     R R+  R   T PSPSR KE
Sbjct: 38  RRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKE 69

>SNUT3_HUMAN (Q8WVK2) U4/U6.U5 tri-snRNP-associated protein 3 (U4/U6.U5|
           tri-snRNP-associated 27 kDa protein) (27K) (Nucleic
           acid-binding protein RY-1)
          Length = 155

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 16/32 (50%), Positives = 17/32 (53%)
 Frame = +1

Query: 160 RARSASR*GETARGRARNRADRTDPSPSRQKE 255
           R RS SR     R R+  R   T PSPSR KE
Sbjct: 38  RRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKE 69


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,165,597
Number of Sequences: 219361
Number of extensions: 826306
Number of successful extensions: 2365
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2364
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)