ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbart29a12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC073648.7| Homo sapiens BAC clone RP11-747H12 from 4, complete sequence Length = 180659 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 254 aaagcaagaagaagaagagaaaa 276 ||||||||||||||||||||||| Sbjct: 115454 aaagcaagaagaagaagagaaaa 115476
>gb|AC148456.2| Xenopus tropicalis clone CH216-168B18, complete sequence Length = 145394 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 agaagaagaagagaaaaataat 281 |||||||||||||||||||||| Sbjct: 110051 agaagaagaagagaaaaataat 110030
>gb|AY619156.1| Daphnia pulicaria clone WFms0000147 microsatellite marker Dp143 sequence Length = 364 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 aagaagaagaagagaaaaata 279 ||||||||||||||||||||| Sbjct: 169 aagaagaagaagagaaaaata 189
>gb|AY680699.1| Vitis vinifera chloroplast chaperonin 21 (cpn21) gene, complete cds; nuclear gene for chloroplast product Length = 2182 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 caagaagaagaagagaaaaat 278 ||||||||||||||||||||| Sbjct: 199 caagaagaagaagagaaaaat 179
>ref|XM_614588.2| PREDICTED: Bos taurus ETAA16 protein (ETAA16), mRNA Length = 3680 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 aagaagaagaagagaaaaata 279 ||||||||||||||||||||| Sbjct: 2674 aagaagaagaagagaaaaata 2694
>ref|XM_645741.1| Entamoeba histolytica HM-1:IMSS hsp70 family protein (197.t00013) partial mRNA Length = 2274 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 253 gaaagcaagaagaagaagagaaaaa 277 ||||| ||||||||||||||||||| Sbjct: 2114 gaaagaaagaagaagaagagaaaaa 2138
>ref|XM_645914.1| Entamoeba histolytica HM-1:IMSS calponin homology domain protein (187.t00001) partial mRNA Length = 2994 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 aaagcaagaagaagaagagaa 274 ||||||||||||||||||||| Sbjct: 1272 aaagcaagaagaagaagagaa 1292 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 aaagcaagaagaagaagagaa 274 ||||||||||||||||||||| Sbjct: 1140 aaagcaagaagaagaagagaa 1160 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 aaagcaagaagaagaagagaa 274 ||||||||||||||||||||| Sbjct: 1074 aaagcaagaagaagaagagaa 1094
>ref|XM_777238.1| PREDICTED: Strongylocentrotus purpuratus similar to leucine-rich B7 protein isoform 1 (LOC576979), mRNA Length = 1115 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 agcaagaagaagaagagaaaa 276 ||||||||||||||||||||| Sbjct: 187 agcaagaagaagaagagaaaa 207
>gb|AC005169.3| Arabidopsis thaliana chromosome 2 clone F6F22 map mi148, complete sequence Length = 126386 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 aagaagaagaagagaaaaata 279 ||||||||||||||||||||| Sbjct: 52284 aagaagaagaagagaaaaata 52304
>gb|AC012101.7| Homo sapiens chromosome 18, clone RP11-396D4, complete sequence Length = 168965 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 gaagaagaagagaaaaataat 281 ||||||||||||||||||||| Sbjct: 149733 gaagaagaagagaaaaataat 149713
>gb|AC090812.5| Homo sapiens chromosome 18, clone RP11-59J7, complete sequence Length = 176873 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 gaagaagaagagaaaaataat 281 ||||||||||||||||||||| Sbjct: 145061 gaagaagaagagaaaaataat 145081
>gb|AC022723.9| Homo sapiens chromosome 18, clone RP11-237L16, complete sequence Length = 121014 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 gaagaagaagagaaaaataat 281 ||||||||||||||||||||| Sbjct: 42800 gaagaagaagagaaaaataat 42780
>gb|AC084838.7| Homo sapiens chromosome 8, clone CTD-2023J5, complete sequence Length = 183693 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 aagaagaagaagagaaaaata 279 ||||||||||||||||||||| Sbjct: 48636 aagaagaagaagagaaaaata 48616
>gb|AC153764.3| Loxodonta africana clone VMRC15-169D19, complete sequence Length = 147688 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 aaggagaaactgaaagaatat 23 ||||||||||||||||||||| Sbjct: 83993 aaggagaaactgaaagaatat 83973
>gb|AC158598.7| Mus musculus 10 BAC RP24-286B23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 162273 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 248 agaaggaaagcaagaagaagaagagaaaa 276 |||||||||| ||||||||||| |||||| Sbjct: 86460 agaaggaaagaaagaagaagaaaagaaaa 86488
>gb|AC154685.2| Mus musculus BAC clone RP24-321G16 from chromosome 17, complete sequence Length = 162362 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 aagaagaagaagagaaaaata 279 ||||||||||||||||||||| Sbjct: 122392 aagaagaagaagagaaaaata 122412
>gb|AC004672.1|AC004672 Homo sapiens 12p13.3-0-2.7 BAC RP5-951N9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 85420 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 aagaagaagaagagaaaaata 279 ||||||||||||||||||||| Sbjct: 37943 aagaagaagaagagaaaaata 37963
>emb|BX908397.7| Zebrafish DNA sequence from clone CH211-103F16 in linkage group 22, complete sequence Length = 87359 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 248 agaaggaaagcaagaagaagaagag 272 |||||||||| |||||||||||||| Sbjct: 37580 agaaggaaagtaagaagaagaagag 37604
>emb|BX649502.4| Zebrafish DNA sequence from clone DKEY-204F11 in linkage group 3, complete sequence Length = 247387 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 aagaagaagaagagaaaaata 279 ||||||||||||||||||||| Sbjct: 103747 aagaagaagaagagaaaaata 103767
>emb|AL837508.21| Mouse DNA sequence from clone RP23-256C7 on chromosome 4, complete sequence Length = 158009 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 260 agaagaagaagagaaaaataa 280 ||||||||||||||||||||| Sbjct: 84286 agaagaagaagagaaaaataa 84266
>gb|DQ306258.1| Takifugu rubripes odorant receptor (OR8298-1) gene, complete cds Length = 1005 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 tgatgagagtcctgcatcggt 56 ||||||||||||||||||||| Sbjct: 553 tgatgagagtcctgcatcggt 533
>gb|DQ306203.1| Takifugu rubripes odorant receptor (OR1026-1) pseudogene, partial sequence Length = 944 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 tgatgagagtcctgcatcggt 56 ||||||||||||||||||||| Sbjct: 523 tgatgagagtcctgcatcggt 503
>gb|AC003956.1|AC003956 Homo sapiens DNA from chromosome 19, cosmid R34078, complete sequence Length = 46327 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 250 aaggaaagcaagaagaagaagagaa 274 |||||||| |||||||||||||||| Sbjct: 9485 aaggaaaggaagaagaagaagagaa 9509
>emb|CT030154.8| Mouse DNA sequence from clone RP23-387H3 on chromosome 12, complete sequence Length = 213294 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 gaagaagaagagaaaaataat 281 ||||||||||||||||||||| Sbjct: 84503 gaagaagaagagaaaaataat 84523
>gb|AC154673.2| Mus musculus BAC clone RP24-298M20 from chromosome 17, complete sequence Length = 157621 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 aagaagaagaagagaaaaata 279 ||||||||||||||||||||| Sbjct: 719 aagaagaagaagagaaaaata 739
>emb|Y08459.1|BTY08459 B.taurus mRNA for novel cytoplasmic protein Length = 3148 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 aagaagaagaagagaaaaata 279 ||||||||||||||||||||| Sbjct: 2677 aagaagaagaagagaaaaata 2697
>emb|AL807755.7| Mouse DNA sequence from clone RP23-394N20 on chromosome X, complete sequence Length = 203068 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 gaaccaacccaagactaccag 156 ||||||||||||||||||||| Sbjct: 40411 gaaccaacccaagactaccag 40431
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ctcaaattccttttcaatct 94 |||||||||||||||||||| Sbjct: 3882463 ctcaaattccttttcaatct 3882482
>ref|XM_636540.1| Dictyostelium discoideum hypothetical protein (DDB0205771), partial mRNA Length = 3303 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 caagaagaagaagagaaaaa 277 |||||||||||||||||||| Sbjct: 2443 caagaagaagaagagaaaaa 2462
>gb|AC165958.2| Mus musculus BAC clone RP23-417I20 from chromosome 16, complete sequence Length = 186202 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ccaagactaccagactagag 163 |||||||||||||||||||| Sbjct: 74292 ccaagactaccagactagag 74311
>gb|AC168116.3| Mus musculus BAC clone RP24-108N24 from chromosome 1, complete sequence Length = 158847 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 aagaagaagagaaaaataat 281 |||||||||||||||||||| Sbjct: 101160 aagaagaagagaaaaataat 101141
>gb|AY170306.1| Homo sapiens D4S10 region, complete sequence Length = 50472 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 47194 gcaagaagaagaagagaaaa 47213
>gb|AC169508.1| Mus musculus BAC clone RP23-167I21 from chromosome 16, complete sequence Length = 211870 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ccaagactaccagactagag 163 |||||||||||||||||||| Sbjct: 26814 ccaagactaccagactagag 26833
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ctcaaattccttttcaatct 94 |||||||||||||||||||| Sbjct: 3882631 ctcaaattccttttcaatct 3882650
>gb|AF238378.5| Homo sapiens chromosome 8 clone SCb-561b17 map p23.1, complete sequence Length = 128544 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 103520 gcaagaagaagaagagaaaa 103501
>ref|XM_416732.1| PREDICTED: Gallus gallus similar to SH3 domain-binding glutamic acid-rich protein (SH3BGR protein) (21-glutamic acid-rich protein) (21-GARP) (LOC418523), mRNA Length = 1217 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 agaaggaaagcaagaagaagaaga 271 |||||||||||||||||| ||||| Sbjct: 611 agaaggaaagcaagaagaggaaga 634
>gb|AC183529.4| Pan troglodytes BAC clone CH251-669H19 from chromosome 3, complete sequence Length = 216860 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 123314 gcaagaagaagaagagaaaa 123333 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 99667 gcaagaagaagaagagaaaa 99686
>gb|AC183269.3| Pan troglodytes BAC clone CH251-685E7 from chromosome 3, complete sequence Length = 220398 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 29799 gcaagaagaagaagagaaaa 29818 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 6156 gcaagaagaagaagagaaaa 6175
>gb|AF228730.8| Homo sapiens chromosome 8 clones SCb-332a23, CTB-415D8 map p23.1, complete sequences Length = 295854 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 201725 gcaagaagaagaagagaaaa 201744 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 39385 gcaagaagaagaagagaaaa 39366
>gb|AF186996.5| Homo sapiens chromosome 3 clone CTA-388B5 map q21.2, complete sequence Length = 97789 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 45094 gcaagaagaagaagagaaaa 45075
>gb|AC153010.3| Mus musculus BAC clone RP23-325H1 from chromosome 15, complete sequence Length = 230097 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 caagaagaagaagagaaaaa 277 |||||||||||||||||||| Sbjct: 227138 caagaagaagaagagaaaaa 227157
>gb|U61956.3| Caenorhabditis elegans cosmid R13H7, complete sequence Length = 26649 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 10426 gcaagaagaagaagagaaaa 10407
>gb|AC154910.3| Mus musculus BAC clone RP23-70L9 from chromosome 12, complete sequence Length = 243671 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 agaaggaaagcaagaagaagaaga 271 |||||||||| ||||||||||||| Sbjct: 80805 agaaggaaaggaagaagaagaaga 80782
>gb|AC147876.1| Homo sapiens BAC clone RP11-718M20 from 4, complete sequence Length = 119938 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 92671 gcaagaagaagaagagaaaa 92690
>gb|AC142474.4| Mus musculus BAC clone RP24-362N7 from chromosome 15, complete sequence Length = 172879 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 caagaagaagaagagaaaaa 277 |||||||||||||||||||| Sbjct: 96470 caagaagaagaagagaaaaa 96489
>gb|AC140212.2| Mus musculus BAC clone RP23-267G14 from chromosome 15, complete sequence Length = 177379 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 136 gaaccaacccaagactaccagactagag 163 ||||||| ||||||||||||| |||||| Sbjct: 92461 gaaccaagccaagactaccagcctagag 92434
>emb|CT009545.5| M.truncatula DNA sequence from clone MTH2-107B14 on chromosome 3, complete sequence Length = 96467 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ttccttttcaatcttatctt 100 |||||||||||||||||||| Sbjct: 37962 ttccttttcaatcttatctt 37981
>gb|AC124182.4| Mus musculus BAC clone RP23-207J3 from chromosome 15, complete sequence Length = 195532 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 agaaggaaagcaagaagaagaaga 271 |||||||||| ||||||||||||| Sbjct: 37104 agaaggaaaggaagaagaagaaga 37081
>emb|Z49909.1|CEC14A4 Caenorhabditis elegans Cosmid C14A4, complete sequence Length = 39784 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 aaagcaagaagaagaagaga 273 |||||||||||||||||||| Sbjct: 10995 aaagcaagaagaagaagaga 11014
>gb|AC079781.7| Homo sapiens BAC clone RP11-380G21 from 7, complete sequence Length = 97556 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 95042 gcaagaagaagaagagaaaa 95061
>gb|AC079804.5| Homo sapiens BAC clone RP11-740N7 from 7, complete sequence Length = 184512 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 40542 gcaagaagaagaagagaaaa 40561 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 17398 gcaagaagaagaagagaaaa 17417
>gb|AC104057.4| Homo sapiens BAC clone RP13-157F18 from 7, complete sequence Length = 196523 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 254 aaagcaagaagaagaagagaaaaa 277 |||| ||||||||||||||||||| Sbjct: 67547 aaagaaagaagaagaagagaaaaa 67524
>gb|AC158622.4| Mus musculus 10 BAC RP23-292G1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 232339 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 caagaagaagaagagaaaaa 277 |||||||||||||||||||| Sbjct: 19376 caagaagaagaagagaaaaa 19357
>emb|AL591644.14| Human DNA sequence from clone RP11-443B9 on chromosome 9 Contains a laminin receptor 1 (67kD, ribosomal protein SA) (LAMR1) pseudogene, complete sequence Length = 97747 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 aagaagaagagaaaaataat 281 |||||||||||||||||||| Sbjct: 61812 aagaagaagagaaaaataat 61793
>emb|AL590486.9| Human DNA sequence from clone RP11-89A10 on chromosome 6, complete sequence Length = 78396 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 aagaagaagaagagaaaaat 278 |||||||||||||||||||| Sbjct: 29536 aagaagaagaagagaaaaat 29517
>emb|AL442071.30| Human DNA sequence from clone RP11-420K8 on chromosome 1 Contains part of the MACF1 gene for microtubule-actin crosslinking factor 1, a novel gene, a heat shock 10kDa protein 1 (chaperonin 10) (HSPE1) pseudogene and a CpG island, complete sequence Length = 121295 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aaactgaaagaatatataca 28 |||||||||||||||||||| Sbjct: 21956 aaactgaaagaatatataca 21937
>gb|AE014823.1| Plasmodium falciparum 3D7 chromosome 14 section 8 of 13 of the complete sequence Length = 249943 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 254 aaagcaagaagaagaagagaaaaa 277 |||||||||||||||||| ||||| Sbjct: 31898 aaagcaagaagaagaagaaaaaaa 31875
>emb|AL359316.6| Human DNA sequence from clone RP3-359L13 on chromosome 6, complete sequence Length = 41722 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 aagaagaagaagagaaaaat 278 |||||||||||||||||||| Sbjct: 11352 aagaagaagaagagaaaaat 11371
>emb|AL133215.17| Human DNA sequence from clone RP11-108L7 on chromosome 10 Contains the 3' end of the C10orf6 gene for chromosome 10 open reading frame 6, the SEMA4G gene for sema domain immunoglobulin domain (Ig) transmembrane domain (TM) and short cytoplasmic domain (semaphorin) 4G, the MRPL43 gene for mitochondrial ribosomal protein L43, the C10orf2 gene for chromosome 10 open reading frame 2, the gene for a novel protein (KIAA1813) (LAPSER1), a novel gene, the gene for a novel protein (FLJ23209 FLJ00011), the gene for a novel tricarboxylate carrier domain containing protein (FLJ34185 FLJ35692), the gene for a novel kazal-type serine protease inhibitor domain and immunoglobulin domain containing protein (FKSG28) (FKSG4), the 3' end of a novel gene and six CpG islands, complete sequence Length = 181086 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 gaagaagaagagaaaaataa 280 |||||||||||||||||||| Sbjct: 8126 gaagaagaagagaaaaataa 8145
>emb|AL096764.11|HSJ298J18 Human DNA sequence from clone RP1-298J18 on chromosome Xq22.3-24 Contains a 60S ribosomal protein (RPL18A), the gene for an uncharacterized hematopoietic stem/progenitor cells protein MDS031, the 5' end of a novel gene and a CpG island, complete sequence Length = 99332 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 248 agaaggaaagcaagaagaagaagagaaa 275 |||| ||||| ||||||||||||||||| Sbjct: 36115 agaaagaaagaaagaagaagaagagaaa 36088
>emb|AL035659.22|HS979N1 Human DNA sequence from clone RP5-979N1 on chromosome 22q13.1-13.32, complete sequence Length = 102151 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ctactagtaccaagaacaaa 128 |||||||||||||||||||| Sbjct: 79368 ctactagtaccaagaacaaa 79387
>gb|AC158342.4| Mus musculus chromosome 1, clone RP23-12H12, complete sequence Length = 224295 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 aagaagaagaagagaaaaat 278 |||||||||||||||||||| Sbjct: 185389 aagaagaagaagagaaaaat 185408
>gb|AC158934.4| Mus musculus chromosome 3, clone RP23-218L17, complete sequence Length = 194631 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 aagaagaagaagagaaaaat 278 |||||||||||||||||||| Sbjct: 128722 aagaagaagaagagaaaaat 128703
>emb|AL022339.1|HSN75B3 Human DNA sequence from clone LL22NC03-75B3 on chromosome 22, complete sequence Length = 40476 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 ctattttttactcctcaaat 81 |||||||||||||||||||| Sbjct: 13606 ctattttttactcctcaaat 13587
>gb|AY303577.1| Caenorhabditis elegans cell death-related nuclease 3 (crn-3) mRNA, complete cds Length = 2631 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 aaagcaagaagaagaagaga 273 |||||||||||||||||||| Sbjct: 2070 aaagcaagaagaagaagaga 2089
>gb|AC097265.4| Pan troglodytes BAC RP43-119N13 (Roswell Park Cancer Institute Male Chimpanzee BAC Library) complete sequence Length = 187084 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 245 gccagaaggaaagcaagaagaagaagagaaaaataa 280 ||||||||||||| || |||||||| ||||||||| Sbjct: 94953 gccagaaggaaaggaacaagaagaaatgaaaaataa 94988
>emb|Z67999.1|SPAC21E11 S.pombe chromosome I cosmid c21E11 Length = 12854 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 caagaagaagaagagaaaaataat 281 ||||||||||||||| |||||||| Sbjct: 6085 caagaagaagaagaggaaaataat 6062
>emb|BX842636.1| Neurospora crassa DNA linkage group I cosmid contig 7C14 Length = 68050 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 agaaggaaagcaagaagaagaaga 271 |||| ||||||||||||||||||| Sbjct: 61563 agaaagaaagcaagaagaagaaga 61586
>emb|AL731853.9| Mouse DNA sequence from clone RP23-128G5 on chromosome 11 Contains the 5' end of the Osbp2 gene for oxysterol binding protein 2, a novel pseudogene, two novel genes, the Dusp18 gene for dual specificity phosphatase 18 and five CpG islands, complete sequence Length = 205509 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 agaaaaataatccatcgcct 290 |||||||||||||||||||| Sbjct: 92878 agaaaaataatccatcgcct 92897
>gb|AC084121.13| Homo sapiens chromosome 8, clone RP11-623J22, complete sequence Length = 171018 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 137626 gcaagaagaagaagagaaaa 137607
>emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 4 Length = 198697 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 249 gaaggaaagcaagaagaagaagagaaaa 276 |||| |||| |||||||||||||||||| Sbjct: 91285 gaagcaaagaaagaagaagaagagaaaa 91258
>gb|AC129555.29| Mus musculus chromosome 5, clone RP24-90F19, complete sequence Length = 242141 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ccaagactaccagactagag 163 |||||||||||||||||||| Sbjct: 150334 ccaagactaccagactagag 150353
>emb|AJ438268.1|MCI438268 Mucor circinelloides partial tubA gene for alpha-tubulin Length = 2160 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 aagaagaagaagagaaaaat 278 |||||||||||||||||||| Sbjct: 860 aagaagaagaagagaaaaat 841
>gb|AC148832.5| Pan troglodytes BAC clone CH251-48K6 from chromosome 7, complete sequence Length = 186606 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 133138 gcaagaagaagaagagaaaa 133119 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 112264 gcaagaagaagaagagaaaa 112245
>emb|BX784034.8| Zebrafish DNA sequence from clone CH211-194O4 in linkage group 20, complete sequence Length = 187846 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 254 aaagcaagaagaagaagagaaaaa 277 |||| ||||||||||||||||||| Sbjct: 154885 aaagaaagaagaagaagagaaaaa 154862
>dbj|AK124560.1| Homo sapiens cDNA FLJ42569 fis, clone BRACE3007642 Length = 3521 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 3203 gcaagaagaagaagagaaaa 3222
>gb|AC092865.10| Homo sapiens 12 BAC RP11-113C12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 117296 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 60837 gcaagaagaagaagagaaaa 60818
>gb|AC183102.3| Pan troglodytes BAC clone CH251-717M1 from chromosome 3, complete sequence Length = 172268 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 36947 gcaagaagaagaagagaaaa 36928 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 13300 gcaagaagaagaagagaaaa 13281
>gb|AC107918.5| Homo sapiens chromosome 8, clone RP11-481A20, complete sequence Length = 150507 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 144900 gcaagaagaagaagagaaaa 144919 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 39824 gcaagaagaagaagagaaaa 39843
>gb|AC106847.3| Homo sapiens chromosome 8, clone CTD-2333A6, complete sequence Length = 135431 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 111136 gcaagaagaagaagagaaaa 111117 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 40 gcaagaagaagaagagaaaa 21
>gb|AC098976.2| Homo sapiens BAC clone RP11-751L19 from 4, complete sequence Length = 165221 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 30648 gcaagaagaagaagagaaaa 30629
>gb|AC097493.3| Homo sapiens BAC clone RP11-264E23 from 4, complete sequence Length = 163639 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 64355 gcaagaagaagaagagaaaa 64336 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 35190 gcaagaagaagaagagaaaa 35171
>gb|AC000385.2| Homo sapiens chromosome 11 clone PAC pDJ392a17, complete sequence Length = 164155 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 121331 gcaagaagaagaagagaaaa 121350
>gb|AC011744.8| Homo sapiens BAC clone RP11-324I10 from 4, complete sequence Length = 191596 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 29088 gcaagaagaagaagagaaaa 29107
>gb|AC006271.2|AC006271 Homo sapiens chromosome 19, BAC BC319430 (CTC-440L2), complete sequence Length = 100598 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 aagaagaagaagagaaaaat 278 |||||||||||||||||||| Sbjct: 8333 aagaagaagaagagaaaaat 8314
>ref|NM_001019931.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC21E11.05c), partial mRNA Length = 1416 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 caagaagaagaagagaaaaataat 281 ||||||||||||||| |||||||| Sbjct: 1210 caagaagaagaagaggaaaataat 1233
>gb|AC034187.6| Homo sapiens chromosome 3 clone RP11-202A21 map 3p, complete sequence Length = 171716 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 16943 gcaagaagaagaagagaaaa 16962
>gb|AC157557.5| Mus musculus chromosome 7, clone RP24-369M22, complete sequence Length = 202543 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 ccaagactaccagactagagctag 167 ||||||| |||||||||||||||| Sbjct: 86700 ccaagacaaccagactagagctag 86677
>gb|AC008903.7| Homo sapiens chromosome 5 clone CTD-2252H11, complete sequence Length = 148688 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 gaagaagaagagaaaaataa 280 |||||||||||||||||||| Sbjct: 116507 gaagaagaagagaaaaataa 116526
>gb|AF176315.2|AF176315 Homo sapiens chromosome 3 clone RP11-83M12 map 3p, complete sequence Length = 170755 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 106540 gcaagaagaagaagagaaaa 106559
>ref|NM_063882.3| Caenorhabditis elegans Cell-death-Related Nuclease family member (crn-3) (crn-3) mRNA, complete cds Length = 2680 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 aaagcaagaagaagaagaga 273 |||||||||||||||||||| Sbjct: 2071 aaagcaagaagaagaagaga 2090
>ref|NM_182164.3| Caenorhabditis elegans Cell-death-Related Nuclease family member (crn-3) (crn-3) mRNA, complete cds Length = 1873 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 aaagcaagaagaagaagaga 273 |||||||||||||||||||| Sbjct: 1225 aaagcaagaagaagaagaga 1244
>gb|AF288742.1|AF288742 Homo sapiens oxysterol binding protein 2 (OSBP2) gene, complete cds Length = 217292 Score = 40.1 bits (20), Expect = 5.6 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 246 ccagaaggaaagcaagaagaagaagagaaaaa 277 |||||||||||| ||||||||||||| ||||| Sbjct: 203713 ccagaaggaaag-aagaagaagaagaaaaaaa 203743
>gb|AF305868.1|AF305868 Pan troglodytes ribosomal RNA intergenic spacer region, partial sequence Length = 471 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 254 aaagcaagaagaagaagagaaaaa 277 |||| ||||||||||||||||||| Sbjct: 462 aaaggaagaagaagaagagaaaaa 439
>gb|AC145875.3| Pan troglodytes BAC clone RP43-6O8 from chromosome 7, complete sequence Length = 179919 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 77681 gcaagaagaagaagagaaaa 77700
>gb|AC152977.1| Mus musculus 10 BAC RP23-251I19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 192515 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 acccaagactaccagactag 161 |||||||||||||||||||| Sbjct: 47805 acccaagactaccagactag 47786
>emb|BX934008.2| Gallus gallus finished cDNA, clone ChEST58k10 Length = 1199 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 agaaggaaagcaagaagaagaaga 271 |||||||||||||||||| ||||| Sbjct: 579 agaaggaaagcaagaagaggaaga 602
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 aagcaagaagaagaagagaa 274 |||||||||||||||||||| Sbjct: 35046405 aagcaagaagaagaagagaa 35046424
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 caagaagaagaagagaaaaa 277 |||||||||||||||||||| Sbjct: 17823583 caagaagaagaagagaaaaa 17823602
>gb|AF165423.6| Homo sapiens chromosome 3 clone CTB-402G2 map q, complete sequence Length = 125891 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 121648 gcaagaagaagaagagaaaa 121629 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 98934 gcaagaagaagaagagaaaa 98915
>gb|AC130366.5| Homo sapiens chromosome 8, clone RP11-1236K1, complete sequence Length = 178000 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 146688 gcaagaagaagaagagaaaa 146669
>emb|BX828274.1|CNS0A3RN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH70ZB05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1068 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 249 gaaggaaagcaagaagaagaagagaaaa 276 |||| |||| |||||||||||||||||| Sbjct: 354 gaagcaaagaaagaagaagaagagaaaa 381
>gb|AC116655.7| Homo sapiens BAC clone RP11-1396O13 from 4, complete sequence Length = 246224 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 79838 gcaagaagaagaagagaaaa 79857 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 50672 gcaagaagaagaagagaaaa 50691
>gb|AC146160.3| Pan troglodytes BAC clone RP43-1E22 from chromosome 7, complete sequence Length = 182457 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 27351 gcaagaagaagaagagaaaa 27370 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 3637 gcaagaagaagaagagaaaa 3656
>dbj|AP001732.1| Homo sapiens genomic DNA, chromosome 21q, section 76/105 Length = 340000 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaaataa 280 ||||||||||||| |||||||||| Sbjct: 305912 gcaagaagaagaacagaaaaataa 305889
>gb|AC083906.23| Homo sapiens 3 BAC RP11-93K22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167875 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 91604 gcaagaagaagaagagaaaa 91585 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 68891 gcaagaagaagaagagaaaa 68872
>gb|AC007881.4| Homo sapiens BAC clone RP11-467P9 from 2, complete sequence Length = 171247 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 1310 gcaagaagaagaagagaaaa 1291
>gb|AC139453.10| Homo sapiens 3 BAC RP11-803B1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 149461 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 135617 gcaagaagaagaagagaaaa 135598
>gb|AC078864.20| Homo sapiens 12 PAC RP1-288H2 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 44199 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 21687 gcaagaagaagaagagaaaa 21706
>gb|AC068587.16| Homo sapiens chromosome 8, clone RP11-303G3, complete sequence Length = 174171 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 144116 gcaagaagaagaagagaaaa 144135
>gb|AF042089.1|AF042089 Homo sapiens chromosome 3, olfactory receptor pseudogene cluster 1, complete sequence, and myosin light chain kinase (MLCK) pseudogene, partial sequence Length = 106926 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 43258 gcaagaagaagaagagaaaa 43239
>gb|AC007764.2|AC007764 Genomic sequence for Arabidopsis thaliana BAC F22C12 from chromosome I, complete sequence Length = 111222 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 aagaagaagaagagaaaaat 278 |||||||||||||||||||| Sbjct: 90043 aagaagaagaagagaaaaat 90062
>gb|AC006346.1|AC006346 Homo sapiens PAC clone RP5-820G22 from 7, complete sequence Length = 130336 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 aaagcaagaagaagaagagaaaaa 277 |||| ||||||||||||||||||| Sbjct: 53136 aaagaaagaagaagaagagaaaaa 53159
>gb|AC007040.2|AC007040 Homo sapiens BAC clone RP11-298H3 from 2, complete sequence Length = 181671 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 159912 gcaagaagaagaagagaaaa 159893
>gb|AE000783.1| Borrelia burgdorferi B31, complete genome Length = 910724 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 cttttcaatcttatcttaac 103 |||||||||||||||||||| Sbjct: 736724 cttttcaatcttatcttaac 736705
>gb|AC011808.4|AC011808 Arabidopsis thaliana chromosome I BAC F19K19 genomic sequence, complete sequence Length = 93485 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 caagaagaagaagagaaaaa 277 |||||||||||||||||||| Sbjct: 90770 caagaagaagaagagaaaaa 90789
>gb|AF096370.1|F11O4 Arabidopsis thaliana BAC F11O4 Length = 72872 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 249 gaaggaaagcaagaagaagaagagaaaa 276 |||| |||| |||||||||||||||||| Sbjct: 12292 gaagcaaagaaagaagaagaagagaaaa 12319
>dbj|BS000161.1| Pan troglodytes chromosome 22 clone:PTB-058P10, map 22, complete sequences Length = 78415 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaaataa 280 ||||||||||||| |||||||||| Sbjct: 40483 gcaagaagaagaacagaaaaataa 40460
>gb|AC000367.1|HSAC000367 Human Cosmid g1862x055 from 7q31.3, complete sequence Length = 43349 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 aaagcaagaagaagaagagaaaaa 277 |||| ||||||||||||||||||| Sbjct: 39116 aaagaaagaagaagaagagaaaaa 39139
>gb|AC004542.1|AC004542 Homo sapiens PAC clone RP3-430N8 from 22q12.1-qter, complete sequence Length = 134914 Score = 40.1 bits (20), Expect = 5.6 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 246 ccagaaggaaagcaagaagaagaagagaaaaa 277 |||||||||||| ||||||||||||| ||||| Sbjct: 49906 ccagaaggaaag-aagaagaagaagaaaaaaa 49936
>gb|AC102844.11| Mus musculus chromosome 3, clone RP24-389H4, complete sequence Length = 199088 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 aagaagaagaagagaaaaat 278 |||||||||||||||||||| Sbjct: 6363 aagaagaagaagagaaaaat 6382
>gb|AC134788.10| Mus musculus chromosome 1, clone RP24-482A14, complete sequence Length = 157535 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 aagaagaagaagagaaaaat 278 |||||||||||||||||||| Sbjct: 38643 aagaagaagaagagaaaaat 38624
>dbj|AK103610.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133J15, full insert sequence Length = 1420 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 aagcaagaagaagaagagaa 274 |||||||||||||||||||| Sbjct: 1159 aagcaagaagaagaagagaa 1140
>gb|AC154445.2| Mus musculus BAC clone RP24-179O7 from 14, complete sequence Length = 167976 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 aagaagaagagaaaaataat 281 |||||||||||||||||||| Sbjct: 82971 aagaagaagagaaaaataat 82990
>dbj|AK069353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014D16, full insert sequence Length = 1024 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 aagcaagaagaagaagagaa 274 |||||||||||||||||||| Sbjct: 782 aagcaagaagaagaagagaa 763
>emb|AL592170.21| Human DNA sequence from clone RP11-298A19 on chromosome 22, complete sequence Length = 186861 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 159619 gcaagaagaagaagagaaaa 159600
>emb|BX004766.9| Zebrafish DNA sequence from clone DKEY-5P1 in linkage group 20, complete sequence Length = 214782 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 aaagcaagaagaagaagagaaaaa 277 |||| ||||||||||||||||||| Sbjct: 91129 aaagaaagaagaagaagagaaaaa 91152
>dbj|AK061257.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-B04, full insert sequence Length = 1027 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 aagcaagaagaagaagagaa 274 |||||||||||||||||||| Sbjct: 785 aagcaagaagaagaagagaa 766
>gb|AC157760.1| Homo sapiens chromosome 4 clone WI2-2630G21, complete sequence Length = 44488 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 6934 gcaagaagaagaagagaaaa 6953
>emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0723C07, complete sequence Length = 112897 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 aagcaagaagaagaagagaa 274 |||||||||||||||||||| Sbjct: 1073 aagcaagaagaagaagagaa 1092
>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete sequence Length = 94152 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 aagcaagaagaagaagagaa 274 |||||||||||||||||||| Sbjct: 78073 aagcaagaagaagaagagaa 78092
>gb|AC006341.2|F3O9 Arabidopsis thaliana chromosome 1 BAC F3O9 sequence, complete sequence Length = 114498 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 caagaagaagaagagaaaaa 277 |||||||||||||||||||| Sbjct: 102897 caagaagaagaagagaaaaa 102878
>dbj|AP004607.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-529A4, complete sequence Length = 160683 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gaaactgaaagaatatatac 27 |||||||||||||||||||| Sbjct: 82720 gaaactgaaagaatatatac 82739
>gb|AC101838.17| Mus musculus chromosome 1, clone RP23-242B14, complete sequence Length = 178509 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 agaaggaaagcaagaagaagaaga 271 |||||||||| ||||||||||||| Sbjct: 68380 agaaggaaaggaagaagaagaaga 68357
>gb|AC157210.1| Homo sapiens chromosome 4 clone WI2-3374G23, complete sequence Length = 44309 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 38331 gcaagaagaagaagagaaaa 38312
>gb|AC102657.13| Mus musculus chromosome 10, clone RP23-15N10, complete sequence Length = 186954 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 caagaagaagaagagaaaaa 277 |||||||||||||||||||| Sbjct: 8039 caagaagaagaagagaaaaa 8058
>dbj|AP002495.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2313N18, complete sequence Length = 131570 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 129336 gcaagaagaagaagagaaaa 129317
>dbj|AP002448.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-76P21, complete sequences Length = 177236 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 248 agaaggaaagcaagaagaagaagagaaa 275 |||| ||||| ||||||||||||||||| Sbjct: 95764 agaaagaaagaaagaagaagaagagaaa 95791
>dbj|AP000719.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-757C15, complete sequences Length = 196424 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 51644 gcaagaagaagaagagaaaa 51625
>gb|AC161367.4| Mus musculus BAC clone RP23-450F3 from chromosome 1, complete sequence Length = 188588 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 aagaagaagagaaaaataat 281 |||||||||||||||||||| Sbjct: 173202 aagaagaagagaaaaataat 173221
>dbj|AP002800.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-832A4, complete sequence Length = 215441 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 ttttttactcctcaaattcctttt 88 |||||| ||||||||||||||||| Sbjct: 22025 tttttttctcctcaaattcctttt 22002
>dbj|AP005435.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-81M19, complete sequence Length = 66005 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 gaaactgaaagaatatatac 27 |||||||||||||||||||| Sbjct: 13224 gaaactgaaagaatatatac 13205
>gb|AY935266.1| Lycopersicon esculentum symbiosis receptor-like kinase (SYMRK) mRNA, complete cds Length = 3272 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ttactcctcaaattcctttt 88 |||||||||||||||||||| Sbjct: 3052 ttactcctcaaattcctttt 3071
>gb|AY940041.1| Lycopersicon esculentum symbiosis receptor-like kinase (SYMRK) gene, complete cds Length = 12561 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ttactcctcaaattcctttt 88 |||||||||||||||||||| Sbjct: 8822 ttactcctcaaattcctttt 8841
>gb|AC161465.3| Gallus gallus BAC clone CH261-97D4 from chromosome ul, complete sequence Length = 213337 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 agaaggaaagcaagaagaagaaga 271 |||||||||||||||||| ||||| Sbjct: 202487 agaaggaaagcaagaagaggaaga 202510
>gb|DQ306204.1| Takifugu rubripes odorant receptor (OR1026-2) gene, complete cds Length = 945 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 gatgagagtcctgcatcggt 56 |||||||||||||||||||| Sbjct: 522 gatgagagtcctgcatcggt 503
>gb|AE000657.1| Aquifex aeolicus VF5, complete genome Length = 1551335 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 aaagcaagaagaagaagagaaaaa 277 |||| ||||||||||||||||||| Sbjct: 1429416 aaagaaagaagaagaagagaaaaa 1429439
>gb|AC005358.1|AC005358 Homo sapiens chromosome 17, clone hRPK.746_E_8, complete sequence Length = 184886 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 caaattccttttcaatctta 96 |||||||||||||||||||| Sbjct: 121125 caaattccttttcaatctta 121144
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 caagaagaagaagagaaaaa 277 |||||||||||||||||||| Sbjct: 17749902 caagaagaagaagagaaaaa 17749921
>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09, complete sequence Length = 145391 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 aagcaagaagaagaagagaa 274 |||||||||||||||||||| Sbjct: 105452 aagcaagaagaagaagagaa 105471
>emb|AL731787.3|CNS08C8B Oryza sativa chromosome 12, . BAC OSJNBb0014C10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 142246 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 caagaagaagaagagaaaaa 277 |||||||||||||||||||| Sbjct: 42781 caagaagaagaagagaaaaa 42800
>gb|AF017257.1|AF017257 Homo sapiens chromosome 21 derived BAC containing erythroblastosis virus oncogene homolog 2 protein (ets-2) gene, complete cds, complete sequence Length = 101569 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaaataa 280 ||||||||||||| |||||||||| Sbjct: 4867 gcaagaagaagaacagaaaaataa 4844
>gb|AC137155.3| Mus musculus BAC clone RP23-66E11 from 12, complete sequence Length = 211064 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 agaaggaaagcaagaagaagaaga 271 |||||||||| ||||||||||||| Sbjct: 169470 agaaggaaaggaagaagaagaaga 169447
>emb|CT010506.9| Mouse DNA sequence from clone RP23-204N13 on chromosome 14, complete sequence Length = 233486 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 aagaagaagagaaaaataat 281 |||||||||||||||||||| Sbjct: 100468 aagaagaagagaaaaataat 100449
>gb|AC000373.1|HSAC000373 Human cosmid g1862d218, complete sequence Length = 39602 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 aaagcaagaagaagaagagaaaaa 277 |||| ||||||||||||||||||| Sbjct: 482 aaagaaagaagaagaagagaaaaa 505
>gb|AC099643.5| Mus musculus chromosome 7, clone RP24-350G1, complete sequence Length = 139303 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 ccaagactaccagactagagctag 167 ||||||| |||||||||||||||| Sbjct: 69872 ccaagacaaccagactagagctag 69849
>dbj|AP007296.1| Lotus japonicus genomic DNA, clone:LjT02J24, TM0401, complete sequence Length = 71160 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 aagaagaagaagagaaaaat 278 |||||||||||||||||||| Sbjct: 46432 aagaagaagaagagaaaaat 46413
>dbj|AP004916.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT18E24, TM0074, complete sequence Length = 131741 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 aagaagaagaagagaaaaat 278 |||||||||||||||||||| Sbjct: 110043 aagaagaagaagagaaaaat 110062
>dbj|AP004908.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT12N11, TM0066, complete sequence Length = 79585 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 aagaagaagaagagaaaaat 278 |||||||||||||||||||| Sbjct: 22255 aagaagaagaagagaaaaat 22274
>gb|AF215847.4| Homo sapiens chromosome 8 clone CTB-877E9 map p23.1, complete sequence Length = 103417 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 51720 gcaagaagaagaagagaaaa 51739
>gb|AC068312.5| Homo sapiens chromosome 3 clone RP11-128A5 map 3p, complete sequence Length = 170350 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 23593 gcaagaagaagaagagaaaa 23574
>gb|AC092957.6| Homo sapiens 3 BAC RP11-635I10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161585 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 gaagaagaagagaaaaataa 280 |||||||||||||||||||| Sbjct: 11433 gaagaagaagagaaaaataa 11414
>dbj|AP001040.1| Homo sapiens genomic DNA, chromosome 21, clone:Q109A8, ERG-ETS2 region, complete sequence Length = 45489 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaaataa 280 ||||||||||||| |||||||||| Sbjct: 7161 gcaagaagaagaacagaaaaataa 7138
>dbj|AP000867.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-684B2, complete sequences Length = 199999 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcaagaagaagaagagaaaa 276 |||||||||||||||||||| Sbjct: 126964 gcaagaagaagaagagaaaa 126945
>dbj|AP004833.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-358N4, complete sequence Length = 75416 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 gaaactgaaagaatatatac 27 |||||||||||||||||||| Sbjct: 64432 gaaactgaaagaatatatac 64413 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,788,762 Number of Sequences: 3902068 Number of extensions: 4788762 Number of successful extensions: 142621 Number of sequences better than 10.0: 165 Number of HSP's better than 10.0 without gapping: 163 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 142125 Number of HSP's gapped (non-prelim): 498 length of query: 419 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 397 effective length of database: 17,147,199,772 effective search space: 6807438309484 effective search space used: 6807438309484 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
