Clone Name | rbart29a11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SYFA_NITMU (Q2YBS2) Phenylalanyl-tRNA synthetase alpha chain (EC... | 30 | 5.3 |
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>SYFA_NITMU (Q2YBS2) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 344 Score = 29.6 bits (65), Expect = 5.3 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = +1 Query: 139 PQAHEVTRMSNTFQVKEENNNLSPAYRRQHTVP 237 P++H M +TF V +EN S R HT P Sbjct: 146 PESHPARAMHDTFYVDDENGGASEHLLRTHTSP 178 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,545,401 Number of Sequences: 219361 Number of extensions: 980675 Number of successful extensions: 2538 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 2494 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2538 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)