ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart29a11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468529.1| Oryza sativa (japonica cultivar-group), mRNA 133 6e-28
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
3dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
4gb|AC087863.10| Homo sapiens 12q BAC RP11-357K6 (Roswell Park Ca... 46 0.12
5ref|XM_693702.1| PREDICTED: Danio rerio similar to C-type natriu... 46 0.12
6gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 46 0.12
7gb|AC137066.23| Pan troglodytes clone ptb-31f12, complete sequence 44 0.46
8gb|AC000086.1| Homo sapiens Chromosome 22q11.2 Cosmid Clone 81h ... 44 0.46
9dbj|BS000180.1| Pan troglodytes chromosome 22 clone:RP43-184I13,... 44 0.46
10dbj|AP001708.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 44 0.46
11dbj|AP001069.1| Homo sapiens genomic DNA, chromosome 21q22.1, cl... 44 0.46
12gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome 42 1.8
13gb|AC093351.8| Mus musculus chromosome 7, clone RP23-16L19, comp... 42 1.8
14gb|AE009281.1| Agrobacterium tumefaciens str. C58 linear chromos... 42 1.8
15gb|AE008331.1| Agrobacterium tumefaciens str. C58 linear chromos... 42 1.8
16gb|BC043943.1| Mus musculus mitogen-activated protein kinase kin... 42 1.8
17gb|BC031147.1| Mus musculus mitogen-activated protein kinase kin... 42 1.8
18ref|NM_001032724.1| Takifugu rubripes solute carrier family 14 (... 42 1.8
19ref|XM_984997.1| PREDICTED: Mus musculus mitogen-activated prote... 42 1.8
20gb|AC159820.2| Mus musculus BAC clone RP23-158K20 from chromosom... 42 1.8
21dbj|AB181946.1| Takifugu rubripes fgUT mRNA for fugu urea transp... 42 1.8
22gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete ge... 42 1.8
23gb|AC109276.12| Mus musculus chromosome 1, clone RP23-461J11, co... 40 7.1
24gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 7.1
25gb|AF076669.1| Zosterops lateralis chlorocephala clone ZL22, mic... 40 7.1
26ref|XM_457720.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 7.1
27ref|XM_954145.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.1
28ref|XM_327176.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.1
29gb|AC147381.3| Pan troglodytes BAC clone RP43-162H15 from 7, com... 40 7.1
30gb|DQ158856.1| Bigelowiella natans nucleomorph chromosome 1, par... 40 7.1
31gb|AY217133.1| Taeniopygia guttata CHD1Z gene 5' flanking reigon 40 7.1
32ref|XM_569660.1| Cryptococcus neoformans var. neoformans JEC21 p... 40 7.1
33emb|AL389885.12| Human DNA sequence from clone RP11-391J2 on chr... 40 7.1
34gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 7.1
35emb|AL136365.9| Human DNA sequence from clone RP11-143M15 on chr... 40 7.1
36gb|AC158777.3| Mus musculus chromosome 15, clone RP24-354I13, co... 40 7.1
37gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 7.1
38emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS... 40 7.1
39gb|AC034259.7| Homo sapiens chromosome 11, clone RP11-138N3, com... 40 7.1
40gb|AC023932.11| Homo sapiens chromosome 18, clone RP11-510D21, c... 40 7.1
41gb|AC005250.1| Homo sapiens BAC clone CTA-318M5 from 7, complete... 40 7.1
42gb|AC025972.6|AC025972 Homo sapiens chromosome 11, clone RP11-6K... 40 7.1
43gb|AC090885.1|AC090885 Homo sapiens chromosome 3 clone RP11-270I... 40 7.1
44gb|AC090942.1|AC090942 Homo sapiens chromosome 3 clone RP11-220D... 40 7.1
45gb|AC066589.3|AC066589 Homo sapiens chromosome 3 clone RP11-309M... 40 7.1
46gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 7.1
47ref|XM_311708.2| Anopheles gambiae str. PEST ENSANGP00000013637 ... 40 7.1
48gb|AC109185.15| Mus musculus chromosome 15, clone RP24-543J20, c... 40 7.1
49gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 7.1
50gb|DQ073920.1| Penaeus monodon lymphoid organ expressed yellow h... 40 7.1
51gb|AC069246.6| Homo sapiens chromosome 3 clone RP11-221A8 map 3p... 40 7.1
52dbj|AP002807.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 7.1 
>ref|XM_468529.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1272

 Score =  133 bits (67), Expect = 6e-28
 Identities = 148/175 (84%)
 Strand = Plus / Minus

                                                                        
Query: 291  gcctcgaccttctcccactcctccttggcatcacccttggcagccttcttcatcgccatg 350
            ||||| ||||||| ||||||||||||||| ||||||||| || | ||| |||||||||||
Sbjct: 1235 gcctcaaccttcttccactcctccttggcgtcacccttgacaactttcctcatcgccatg 1176

                                                                        
Query: 351  ccgagctccttggcatgcttcaccttcctgctcttgaccagcccttggatcagacccttg 410
             | | |||||||||||| ||  ||||||||||||||| ||  |||| |||||| || |  
Sbjct: 1175 gcaacctccttggcatgtttggccttcctgctcttgagcaatcctttgatcagtccttgt 1116

                                                                   
Query: 411  acagcctggaacggcggcgcccacttgttggccaggcactccttgcacacctcca 465
            ||||| |||||||||||||||||||||||   |||||| |||||| |||||||||
Sbjct: 1115 acagcttggaacggcggcgcccacttgttctgcaggcattccttgaacacctcca 1061
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  133 bits (67), Expect = 6e-28
 Identities = 148/175 (84%)
 Strand = Plus / Plus

                                                                            
Query: 291      gcctcgaccttctcccactcctccttggcatcacccttggcagccttcttcatcgccatg 350
                ||||| ||||||| ||||||||||||||| ||||||||| || | ||| |||||||||||
Sbjct: 35693612 gcctcaaccttcttccactcctccttggcgtcacccttgacaactttcctcatcgccatg 35693671

                                                                            
Query: 351      ccgagctccttggcatgcttcaccttcctgctcttgaccagcccttggatcagacccttg 410
                 | | |||||||||||| ||  ||||||||||||||| ||  |||| |||||| || |  
Sbjct: 35693672 gcaacctccttggcatgtttggccttcctgctcttgagcaatcctttgatcagtccttgt 35693731

                                                                       
Query: 411      acagcctggaacggcggcgcccacttgttggccaggcactccttgcacacctcca 465
                ||||| |||||||||||||||||||||||   |||||| |||||| |||||||||
Sbjct: 35693732 acagcttggaacggcggcgcccacttgttctgcaggcattccttgaacacctcca 35693786



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 62       gttcgaaatgcaaataccttatatg 86
                ||||||||||||||||||| |||||
Sbjct: 35693403 gttcgaaatgcaaatacctcatatg 35693427
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>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1124_D06
          Length = 102239

 Score =  133 bits (67), Expect = 6e-28
 Identities = 148/175 (84%)
 Strand = Plus / Plus

                                                                         
Query: 291   gcctcgaccttctcccactcctccttggcatcacccttggcagccttcttcatcgccatg 350
             ||||| ||||||| ||||||||||||||| ||||||||| || | ||| |||||||||||
Sbjct: 54226 gcctcaaccttcttccactcctccttggcgtcacccttgacaactttcctcatcgccatg 54285

                                                                         
Query: 351   ccgagctccttggcatgcttcaccttcctgctcttgaccagcccttggatcagacccttg 410
              | | |||||||||||| ||  ||||||||||||||| ||  |||| |||||| || |  
Sbjct: 54286 gcaacctccttggcatgtttggccttcctgctcttgagcaatcctttgatcagtccttgt 54345

                                                                    
Query: 411   acagcctggaacggcggcgcccacttgttggccaggcactccttgcacacctcca 465
             ||||| |||||||||||||||||||||||   |||||| |||||| |||||||||
Sbjct: 54346 acagcttggaacggcggcgcccacttgttctgcaggcattccttgaacacctcca 54400



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 62    gttcgaaatgcaaataccttatatg 86
             ||||||||||||||||||| |||||
Sbjct: 54017 gttcgaaatgcaaatacctcatatg 54041
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>gb|AC087863.10| Homo sapiens 12q BAC RP11-357K6 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 179876

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 178   caagtgaaagaagaaaacaataa 200
             |||||||||||||||||||||||
Sbjct: 80896 caagtgaaagaagaaaacaataa 80918
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>ref|XM_693702.1| PREDICTED: Danio rerio similar to C-type natriuretic peptide-4
           (LOC570244), mRNA
          Length = 2682

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 184 aaagaagaaaacaataacttatc 206
           |||||||||||||||||||||||
Sbjct: 418 aaagaagaaaacaataacttatc 440
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 264    tcggcgagcgcgagctggaaggcatcc 290
              |||||||||||| ||||||||||||||
Sbjct: 843489 tcggcgagcgcgtgctggaaggcatcc 843463
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>gb|AC137066.23| Pan troglodytes clone ptb-31f12, complete sequence
          Length = 153498

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 359   cttggcatgcttcaccttcctgctct 384
             ||||||| ||||||||||||||||||
Sbjct: 49518 cttggcaagcttcaccttcctgctct 49543
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>gb|AC000086.1| Homo sapiens Chromosome 22q11.2 Cosmid Clone 81h In DGCR Region,
            complete sequence
          Length = 43467

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 359  cttggcatgcttcaccttcctgctct 384
            ||||||| ||||||||||||||||||
Sbjct: 8258 cttggcaagcttcaccttcctgctct 8233
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>dbj|BS000180.1| Pan troglodytes chromosome 22 clone:RP43-184I13, map 22, complete
             sequences
          Length = 158703

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 176   ttcaagtgaaagaagaaaacaa 197
             ||||||||||||||||||||||
Sbjct: 66202 ttcaagtgaaagaagaaaacaa 66181
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>dbj|AP001708.1| Homo sapiens genomic DNA, chromosome 21q, section 52/105
          Length = 340000

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 176    ttcaagtgaaagaagaaaacaa 197
              ||||||||||||||||||||||
Sbjct: 268429 ttcaagtgaaagaagaaaacaa 268408
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>dbj|AP001069.1| Homo sapiens genomic DNA, chromosome 21q22.1, clone:B382J1, SOD-AML
             region, complete sequence
          Length = 105567

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 176   ttcaagtgaaagaagaaaacaa 197
             ||||||||||||||||||||||
Sbjct: 60374 ttcaagtgaaagaagaaaacaa 60353
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>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome
          Length = 1796226

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 88      gaaaagatctatcttgtgtcc 108
               |||||||||||||||||||||
Sbjct: 1495441 gaaaagatctatcttgtgtcc 1495461
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>gb|AC093351.8| Mus musculus chromosome 7, clone RP23-16L19, complete sequence
          Length = 239688

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 180    agtgaaagaagaaaacaataa 200
              |||||||||||||||||||||
Sbjct: 132048 agtgaaagaagaaaacaataa 132028
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>gb|AE009281.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 51 of 187
             of the complete sequence
          Length = 11689

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 268   cgagcgcgagctggaaggcat 288
             |||||||||||||||||||||
Sbjct: 10416 cgagcgcgagctggaaggcat 10436
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>gb|AE008331.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 135 of
            187 of the complete sequence
          Length = 10765

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 268  cgagcgcgagctggaaggcat 288
            |||||||||||||||||||||
Sbjct: 1275 cgagcgcgagctggaaggcat 1255
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>gb|BC043943.1| Mus musculus mitogen-activated protein kinase kinase kinase 15,
           mRNA (cDNA clone IMAGE:4975522), containing frame-shift
           errors
          Length = 3862

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 143 aagcacatgaagtaacacggatgtc 167
           ||||||||||||| |||||||||||
Sbjct: 242 aagcacatgaagtcacacggatgtc 218
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>gb|BC031147.1| Mus musculus mitogen-activated protein kinase kinase kinase 15,
           mRNA (cDNA clone IMAGE:4975522), containing frame-shift
           errors
          Length = 3862

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 143 aagcacatgaagtaacacggatgtc 167
           ||||||||||||| |||||||||||
Sbjct: 242 aagcacatgaagtcacacggatgtc 218
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>ref|NM_001032724.1| Takifugu rubripes solute carrier family 14 (urea transporter), member
            2 (SLC14A2), mRNA
          Length = 1389

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 370  tcaccttcctgctcttgacca 390
            |||||||||||||||||||||
Sbjct: 1034 tcaccttcctgctcttgacca 1054
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>ref|XM_984997.1| PREDICTED: Mus musculus mitogen-activated protein kinase kinase
           kinase 15 (Map3k15), mRNA
          Length = 4661

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 143 aagcacatgaagtaacacggatgtc 167
           ||||||||||||| |||||||||||
Sbjct: 664 aagcacatgaagtcacacggatgtc 640
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>gb|AC159820.2| Mus musculus BAC clone RP23-158K20 from chromosome 9, complete sequence
          Length = 215017

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 375   ttcctgctcttgaccagccct 395
             |||||||||||||||||||||
Sbjct: 31880 ttcctgctcttgaccagccct 31860
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>dbj|AB181946.1| Takifugu rubripes fgUT mRNA for fugu urea transporter fgUT, complete
            cds
          Length = 1389

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 370  tcaccttcctgctcttgacca 390
            |||||||||||||||||||||
Sbjct: 1034 tcaccttcctgctcttgacca 1054
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>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome
          Length = 1796846

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 88      gaaaagatctatcttgtgtcc 108
               |||||||||||||||||||||
Sbjct: 1490811 gaaaagatctatcttgtgtcc 1490831
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>gb|AC109276.12| Mus musculus chromosome 1, clone RP23-461J11, complete sequence
          Length = 173589

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 361   tggcatgcttcaccttcctgctct 384
             |||||||||||| |||||||||||
Sbjct: 85080 tggcatgcttcagcttcctgctct 85057
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>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete
               sequence
          Length = 2105742

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 462     tccagcgcagggacgaacgcgttg 485
               |||||||||||||||| |||||||
Sbjct: 1060654 tccagcgcagggacgatcgcgttg 1060677
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>gb|AF076669.1| Zosterops lateralis chlorocephala clone ZL22, microsatellite
           sequence
          Length = 230

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 442 ccaggcactccttgcacacctcca 465
           |||||||||||||| |||||||||
Sbjct: 207 ccaggcactccttggacacctcca 230
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>ref|XM_457720.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C01023g)
            partial mRNA
          Length = 2178

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 67   aaatgcaaataccttatatg 86
            ||||||||||||||||||||
Sbjct: 1601 aaatgcaaataccttatatg 1582
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>ref|XM_954145.1| Neurospora crassa OR74A hypothetical protein (NCU06891.1) partial
            mRNA
          Length = 3786

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 414  gcctggaacggcggcgccca 433
            ||||||||||||||||||||
Sbjct: 3071 gcctggaacggcggcgccca 3052
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>ref|XM_327176.1| Neurospora crassa OR74A hypothetical protein (NCU06891.1) partial
            mRNA
          Length = 3786

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 414  gcctggaacggcggcgccca 433
            ||||||||||||||||||||
Sbjct: 3071 gcctggaacggcggcgccca 3052
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>gb|AC147381.3| Pan troglodytes BAC clone RP43-162H15 from 7, complete sequence
          Length = 162222

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 168    taatacatttcaagtgaaag 187
              ||||||||||||||||||||
Sbjct: 146573 taatacatttcaagtgaaag 146554
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>gb|DQ158856.1| Bigelowiella natans nucleomorph chromosome 1, partial sequence
          Length = 140590

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 181   gtgaaagaagaaaacaataactta 204
             |||| |||||||||||||||||||
Sbjct: 43383 gtgatagaagaaaacaataactta 43360
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>gb|AY217133.1| Taeniopygia guttata CHD1Z gene 5' flanking reigon
          Length = 4092

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 448 actccttgcacacctccagc 467
           ||||||||||||||||||||
Sbjct: 243 actccttgcacacctccagc 224
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>ref|XM_569660.1| Cryptococcus neoformans var. neoformans JEC21 protein-histidine
            kinase (CNC03340) partial mRNA
          Length = 4811

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 462  tccagcgcagggacgaacgcgttg 485
            |||||||||||||||| |||||||
Sbjct: 3916 tccagcgcagggacgatcgcgttg 3893
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>emb|AL389885.12| Human DNA sequence from clone RP11-391J2 on chromosome 10 Contains a
             histone deacetylase 1 (HD1, RPD3, RPD3L1) (HDAC1)
             pseudogene, part of the PLCE1 gene for phospholipase C,
             epsilon 1 (PLCE, KIAA1516) and a novel gene, complete
             sequence
          Length = 101767

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 166   tctaatacatttcaagtgaaagaa 189
             ||||| ||||||||||||||||||
Sbjct: 42211 tctaaaacatttcaagtgaaagaa 42188
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 490     cgaccagcgcctcgatcagc 509
               ||||||||||||||||||||
Sbjct: 3327646 cgaccagcgcctcgatcagc 3327627
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>emb|AL136365.9| Human DNA sequence from clone RP11-143M15 on chromosome 9p23-24.3
              Contains the DMRT1 gene for doublesex and mab-3 related
              transcription factor 1, the DMRT3 gene for doublesex and
              mab-3 related transcription factor 3 and four CpG islands,
              complete sequence
          Length = 179006

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 178    caagtgaaagaagaaaacaa 197
              ||||||||||||||||||||
Sbjct: 157436 caagtgaaagaagaaaacaa 157417
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>gb|AC158777.3| Mus musculus chromosome 15, clone RP24-354I13, complete sequence
          Length = 175668

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    aatgcaaataccttatatga 87
             ||||||||||||||||||||
Sbjct: 62077 aatgcaaataccttatatga 62058
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 493     ccagcgcctcgatcagcatg 512
               ||||||||||||||||||||
Sbjct: 2819070 ccagcgcctcgatcagcatg 2819089
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>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces
             hansenii
          Length = 1592360

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    aaatgcaaataccttatatg 86
             ||||||||||||||||||||
Sbjct: 96104 aaatgcaaataccttatatg 96123
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>gb|AC034259.7| Homo sapiens chromosome 11, clone RP11-138N3, complete sequence
          Length = 206192

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 371   caccttcctgctcttgacca 390
             ||||||||||||||||||||
Sbjct: 46398 caccttcctgctcttgacca 46417
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>gb|AC023932.11| Homo sapiens chromosome 18, clone RP11-510D21, complete sequence
          Length = 166125

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    aataccttatatgagaaaag 93
             ||||||||||||||||||||
Sbjct: 38258 aataccttatatgagaaaag 38277
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>gb|AC005250.1| Homo sapiens BAC clone CTA-318M5 from 7, complete sequence
          Length = 94336

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   taatacatttcaagtgaaag 187
             ||||||||||||||||||||
Sbjct: 81758 taatacatttcaagtgaaag 81777
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>gb|AC025972.6|AC025972 Homo sapiens chromosome 11, clone RP11-6K5, complete sequence
          Length = 165962

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   gtgaaagaagaaaacaataa 200
             ||||||||||||||||||||
Sbjct: 60522 gtgaaagaagaaaacaataa 60503
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>gb|AC090885.1|AC090885 Homo sapiens chromosome 3 clone RP11-270I6 map 3p, complete sequence
          Length = 193264

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    aagcacatgaagtaacacgg 162
              ||||||||||||||||||||
Sbjct: 171410 aagcacatgaagtaacacgg 171391
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>gb|AC090942.1|AC090942 Homo sapiens chromosome 3 clone RP11-220D14 map 3p, complete sequence
          Length = 172238

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 143  aagcacatgaagtaacacgg 162
            ||||||||||||||||||||
Sbjct: 5700 aagcacatgaagtaacacgg 5681
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>gb|AC066589.3|AC066589 Homo sapiens chromosome 3 clone RP11-309M10 map 3p, complete sequence
          Length = 182171

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   aagcacatgaagtaacacgg 162
             ||||||||||||||||||||
Sbjct: 81401 aagcacatgaagtaacacgg 81420
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 324    cccttggcagccttcttcat 343
              ||||||||||||||||||||
Sbjct: 734821 cccttggcagccttcttcat 734840
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>ref|XM_311708.2| Anopheles gambiae str. PEST ENSANGP00000013637
           (ENSANGG00000011148), partial mRNA
          Length = 1560

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 215 acaggcgacaacatactgtc 234
           ||||||||||||||||||||
Sbjct: 556 acaggcgacaacatactgtc 575
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>gb|AC109185.15| Mus musculus chromosome 15, clone RP24-543J20, complete sequence
          Length = 179776

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    aatgcaaataccttatatga 87
             ||||||||||||||||||||
Sbjct: 80867 aatgcaaataccttatatga 80848
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 449    ctccttgcacacctccagcg 468
              ||||||||||||||||||||
Sbjct: 767130 ctccttgcacacctccagcg 767111
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>gb|DQ073920.1| Penaeus monodon lymphoid organ expressed yellow head virus receptor
           protein mRNA, partial cds
          Length = 1585

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 314 cttggcatcacccttggcagcctt 337
           ||||||||||||||| ||||||||
Sbjct: 762 cttggcatcaccctttgcagcctt 739
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>gb|AC069246.6| Homo sapiens chromosome 3 clone RP11-221A8 map 3p, complete sequence
          Length = 175121

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   aagcacatgaagtaacacgg 162
             ||||||||||||||||||||
Sbjct: 27308 aagcacatgaagtaacacgg 27327
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>dbj|AP002807.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-802E16, complete
             sequences
          Length = 63433

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 371   caccttcctgctcttgacca 390
             ||||||||||||||||||||
Sbjct: 10021 caccttcctgctcttgacca 10002


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,063,783
Number of Sequences: 3902068
Number of extensions: 5063783
Number of successful extensions: 98113
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97507
Number of HSP's gapped (non-prelim): 606
length of query: 528
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 505
effective length of database: 17,143,297,704
effective search space: 8657365340520
effective search space used: 8657365340520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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