>gb|BT009563.1| Triticum aestivum clone wre1n.pk0006.h12:fis, full insert mRNA
           sequence
          Length = 577

 Score =  200 bits (101), Expect = 2e-48
 Identities = 159/178 (89%), Gaps = 3/178 (1%)
 Strand = Plus / Minus

                                                                       
Query: 95  gtacatggtgaggaaaggagaagggaacagatgataacaacagctcaaaacacaaggcca 154
           ||||||| ||||||||||||| | ||||||||   ||||||| ||||||||||||| |||
Sbjct: 479 gtacatgctgaggaaaggagacgtgaacagat---aacaacaactcaaaacacaagccca 423

                                                                       
Query: 155 gatccgtcaagcttgtgttggacgatgcggtccatcttgtcccccatctcgtggctcatg 214
           ||||| |||||||||||||||||||||||||||| ||  ||||||||||| |||||||| 
Sbjct: 422 gatccctcaagcttgtgttggacgatgcggtccaactcctcccccatctcctggctcata 363

                                                                     
Query: 215 tggtttgcccagtcccccactactccttttctgtaaaacacagaattactgacgtgaa 272
           ||||||||||||||||  ||| |||||||||||||||||||||||||| ||| |||||
Sbjct: 362 tggtttgcccagtcccntacttctccttttctgtaaaacacagaattattgatgtgaa 305

>gb|AY596296.1| Haloarcula marismortui ATCC 43049 plasmid pNG700, complete sequence
          Length = 410554

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 198    ccatctcgtggctcatgtggtttgc 222
              ||||||||| |||||||||||||||
Sbjct: 254137 ccatctcgtagctcatgtggtttgc 254161

>dbj|BS000195.1| Pan troglodytes chromosome 22 clone:PTB-014E11, map 22, complete
              sequences
          Length = 251753

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 107    gaaaggagaagggaacagatg 127
              |||||||||||||||||||||
Sbjct: 153384 gaaaggagaagggaacagatg 153364

>gb|AC133192.3| Mus musculus BAC clone RP23-396C4 from 9, complete sequence
          Length = 197959

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 42     acatttgaaagaaacaaactc 62
              |||||||||||||||||||||
Sbjct: 137032 acatttgaaagaaacaaactc 137052

>gb|AC102616.7| Mus musculus chromosome 18, clone RP23-425L21, complete sequence
          Length = 192276

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 124    gatgataacaacagctcaaa 143
              ||||||||||||||||||||
Sbjct: 125595 gatgataacaacagctcaaa 125614

>gb|AC102418.9| Mus musculus chromosome 3, clone RP24-499L10, complete sequence
          Length = 208274

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     aagaacacacatttgaaaga 53
              ||||||||||||||||||||
Sbjct: 169129 aagaacacacatttgaaaga 169110

>gb|BC066874.1| Mus musculus hypothetical LOC435970, mRNA (cDNA clone MGC:76792
            IMAGE:30106557), complete cds
          Length = 2877

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 33   aaagaacacacatttgaaagaaac 56
            |||||||||||| |||||||||||
Sbjct: 1803 aaagaacacacacttgaaagaaac 1826

>gb|AC168306.7| Mus musculus chromosome 18, clone RP23-225N9, complete sequence
          Length = 198815

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    gatgataacaacagctcaaa 143
              ||||||||||||||||||||
Sbjct: 139544 gatgataacaacagctcaaa 139525

>gb|BT018886.1| Zea mays clone EL01T0205E01.d mRNA sequence
          Length = 1617

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 101 ggtgaggaaaggagaaggga 120
           ||||||||||||||||||||
Sbjct: 48  ggtgaggaaaggagaaggga 29

>gb|AC165351.2| Mus musculus BAC clone RP23-197K16 from chromosome 12, complete
             sequence
          Length = 211170

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 241   ttttctgtaaaacacagaat 260
             ||||||||||||||||||||
Sbjct: 89407 ttttctgtaaaacacagaat 89426

>ref|XM_001004424.1| PREDICTED: Mus musculus hypothetical LOC435970 (LOC435970), mRNA
          Length = 2941

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 33   aaagaacacacatttgaaagaaac 56
            |||||||||||| |||||||||||
Sbjct: 1699 aaagaacacacacttgaaagaaac 1722

>ref|XM_001002654.1| PREDICTED: Mus musculus similar to gonadotropin inducible ovarian
            transcription factor 2 (LOC668620), mRNA
          Length = 3064

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 33   aaagaacacacatttgaaagaaac 56
            |||||||||||| |||||||||||
Sbjct: 1826 aaagaacacacacttgaaagaaac 1849

>ref|XM_001003058.1| PREDICTED: Mus musculus hypothetical LOC435970, transcript variant 9
            (LOC435970), mRNA
          Length = 2975

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 33   aaagaacacacatttgaaagaaac 56
            |||||||||||| |||||||||||
Sbjct: 1736 aaagaacacacacttgaaagaaac 1759

>gb|AC007335.7| Homo sapiens chromosome 16 clone RP11-165M2, complete sequence
          Length = 134482

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   ggaaaggagaagggaacaga 125
             ||||||||||||||||||||
Sbjct: 92058 ggaaaggagaagggaacaga 92039

>gb|AC124499.3| Mus musculus BAC clone RP24-68G23 from chromosome 12, complete sequence
          Length = 209276

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 241   ttttctgtaaaacacagaat 260
             ||||||||||||||||||||
Sbjct: 82686 ttttctgtaaaacacagaat 82667

>gb|AC147362.2| Homo sapiens chromosome 16 clone RP11-449J19, complete sequence
          Length = 169792

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   ggaaaggagaagggaacaga 125
             ||||||||||||||||||||
Sbjct: 18734 ggaaaggagaagggaacaga 18715

>gb|AC123045.2| Mus musculus BAC clone RP24-549E10 from chromosome 7, complete sequence
          Length = 142457

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 33    aaagaacacacatttgaaagaaac 56
             |||||||||||| |||||||||||
Sbjct: 30217 aaagaacacacacttgaaagaaac 30240

>gb|AC163445.3| Mus musculus chromosome 3, clone RP24-304A4, complete sequence
          Length = 175181

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    aagaacacacatttgaaaga 53
             ||||||||||||||||||||
Sbjct: 11428 aagaacacacatttgaaaga 11409

>emb|AL590681.5| Human DNA sequence from clone RP11-163N15 on chromosome 13 Contains a
             ubiquitin-conjugating enzyme pseudogene, complete sequence
          Length = 58800

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   ggtgaggaaaggagaaggga 120
             ||||||||||||||||||||
Sbjct: 28827 ggtgaggaaaggagaaggga 28846

>emb|AL139233.8| Human DNA sequence from clone RP1-44A19 on chromosome 6q15-16.2,
             complete sequence
          Length = 105596

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   gctcaaaacacaaggccaga 156
             ||||||||||||||||||||
Sbjct: 22849 gctcaaaacacaaggccaga 22830

>gb|AC007110.3| Homo sapiens chromosome 6, clone hRPK.472_J_18, complete sequence
          Length = 148336

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 137  gctcaaaacacaaggccaga 156
            ||||||||||||||||||||
Sbjct: 1161 gctcaaaacacaaggccaga 1142

>gb|AC020766.10| Homo sapiens chromosome 16 clone RP11-70N16, complete sequence
          Length = 173595

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    ggaaaggagaagggaacaga 125
              ||||||||||||||||||||
Sbjct: 100408 ggaaaggagaagggaacaga 100427

>dbj|AK145615.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched
            library, clone:I1C0022H11 product:similar to Mszf88
            (Fragment) [Mus musculus], full insert sequence
          Length = 3112

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 33   aaagaacacacatttgaaagaaac 56
            |||||||||||| |||||||||||
Sbjct: 1873 aaagaacacacacttgaaagaaac 1896

>gb|AC012071.9| Homo sapiens BAC clone RP11-328L5 from 2, complete sequence
          Length = 195265

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 39     cacacatttgaaagaaacaa 58
              ||||||||||||||||||||
Sbjct: 147720 cacacatttgaaagaaacaa 147739

>gb|AC092635.2| Homo sapiens BAC clone RP11-342E23 from 2, complete sequence
          Length = 125316

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    acacatttgaaagaaacaaa 59
             ||||||||||||||||||||
Sbjct: 47474 acacatttgaaagaaacaaa 47493

>ref|NM_001034893.1| Mus musculus hypothetical LOC435970 (LOC435970), mRNA
          Length = 3112

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 33   aaagaacacacatttgaaagaaac 56
            |||||||||||| |||||||||||
Sbjct: 1873 aaagaacacacacttgaaagaaac 1896

>emb|BX510317.5| Zebrafish DNA sequence from clone CH211-229G14 in linkage group 9,
             complete sequence
          Length = 159458

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 243   ttctgtaaaacacagaatta 262
             ||||||||||||||||||||
Sbjct: 20896 ttctgtaaaacacagaatta 20877

>emb|CR388166.7| Zebrafish DNA sequence from clone DKEY-17E16 in linkage group 21,
             complete sequence
          Length = 220882

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   actactccttttctgtaaaa 252
             ||||||||||||||||||||
Sbjct: 34633 actactccttttctgtaaaa 34614

>gb|AC006265.1|AC006265 Homo sapiens chromosome 17, clone hRPK.566_B_16, complete sequence
          Length = 177707

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    gctcaaaacacaaggccaga 156
              ||||||||||||||||||||
Sbjct: 176868 gctcaaaacacaaggccaga 176849

>gb|AC167544.9| Mus musculus chromosome 7, clone RP24-255K20, complete sequence
          Length = 155048

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 33    aaagaacacacatttgaaagaaac 56
             |||||||||||| |||||||||||
Sbjct: 66978 aaagaacacacacttgaaagaaac 67001


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,173,671
Number of Sequences: 3902068
Number of extensions: 3173671
Number of successful extensions: 67007
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66945
Number of HSP's gapped (non-prelim): 61
length of query: 288
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 266
effective length of database: 17,147,199,772
effective search space: 4561155139352
effective search space used: 4561155139352
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)