ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart29a03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479036.1| Oryza sativa (japonica cultivar-group), mRNA Length = 678 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 250 atcatggcttggcctctggctcctgaaagtggaattcaggctt 292 |||||||||||||||| |||||| | |||||||| |||||||| Sbjct: 463 atcatggcttggcctccggctccgggaagtggaactcaggctt 421
>ref|XM_479034.1| Oryza sativa (japonica cultivar-group), mRNA Length = 776 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 251 tcatggcttggcctctggctcctgaaagtggaattcaggcttcgggggcagctcg 305 ||||||||||||||| |||||| | |||||||| || |||||||| |||| |||| Sbjct: 516 tcatggcttggcctccggctccgggaagtggaactcgggcttcggcggcaactcg 462
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 250 atcatggcttggcctctggctcctgaaagtggaattcaggctt 292 |||||||||||||||| |||||| | |||||||| |||||||| Sbjct: 24427895 atcatggcttggcctccggctccgggaagtggaactcaggctt 24427937 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 251 tcatggcttggcctctggctcctgaaagtggaattcaggcttcgggggcagctcg 305 ||||||||||||||| |||||| | |||||||| || |||||||| |||| |||| Sbjct: 24424060 tcatggcttggcctccggctccgggaagtggaactcgggcttcggcggcaactcg 24424114 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 248 cgatcatggcttggcctctggctc 271 |||||||||||||||||||||||| Sbjct: 24434446 cgatcatggcttggcctctggctc 24434469 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 447 ttcggcaactctggcatggcagggtgcggcagctcg 482 ||||||||||| |||| ||||||||| |||| |||| Sbjct: 24417118 ttcggcaactccggcacggcagggtgaggcacctcg 24417153 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 427 cagggtgtggcatttcaggcttcggcaactctggca 462 |||||||||||| |||||||| |||||||| |||| Sbjct: 24416933 cagggtgtggcacctcaggctttggcaactccggca 24416968
>dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1634_B10 Length = 100294 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 250 atcatggcttggcctctggctcctgaaagtggaattcaggctt 292 |||||||||||||||| |||||| | |||||||| |||||||| Sbjct: 53762 atcatggcttggcctccggctccgggaagtggaactcaggctt 53804 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 251 tcatggcttggcctctggctcctgaaagtggaattcaggcttcgggggcagctcg 305 ||||||||||||||| |||||| | |||||||| || |||||||| |||| |||| Sbjct: 49927 tcatggcttggcctccggctccgggaagtggaactcgggcttcggcggcaactcg 49981 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 248 cgatcatggcttggcctctggctc 271 |||||||||||||||||||||||| Sbjct: 60313 cgatcatggcttggcctctggctc 60336 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 447 ttcggcaactctggcatggcagggtgcggcagctcg 482 ||||||||||| |||| ||||||||| |||| |||| Sbjct: 42985 ttcggcaactccggcacggcagggtgaggcacctcg 43020 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 427 cagggtgtggcatttcaggcttcggcaactctggca 462 |||||||||||| |||||||| |||||||| |||| Sbjct: 42800 cagggtgtggcacctcaggctttggcaactccggca 42835
>dbj|AK065663.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013040D08, full insert sequence Length = 776 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 251 tcatggcttggcctctggctcctgaaagtggaattcaggcttcgggggcagctcg 305 ||||||||||||||| |||||| | |||||||| || |||||||| |||| |||| Sbjct: 516 tcatggcttggcctccggctccgggaagtggaactctggcttcggcggcaactcg 462
>dbj|AK062673.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-G06, full insert sequence Length = 678 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 250 atcatggcttggcctctggctcctgaaagtggaattcaggctt 292 |||||||||||||||| |||||| | |||||||| |||||||| Sbjct: 463 atcatggcttggcctccggctccgggaagtggaactcaggctt 421
>ref|XM_506449.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1634_B10.120 mRNA Length = 629 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 248 cgatcatggcttggcctctggctc 271 |||||||||||||||||||||||| Sbjct: 424 cgatcatggcttggcctctggctc 401
>ref|XM_479039.1| Oryza sativa (japonica cultivar-group), mRNA Length = 629 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 248 cgatcatggcttggcctctggctc 271 |||||||||||||||||||||||| Sbjct: 424 cgatcatggcttggcctctggctc 401
>dbj|AK105814.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-C08, full insert sequence Length = 629 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 248 cgatcatggcttggcctctggctc 271 |||||||||||||||||||||||| Sbjct: 424 cgatcatggcttggcctctggctc 401
>dbj|AK062681.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-H05, full insert sequence Length = 629 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 248 cgatcatggcttggcctctggctc 271 |||||||||||||||||||||||| Sbjct: 424 cgatcatggcttggcctctggctc 401
>gb|AC132322.3| Mus musculus BAC clone RP24-262F3 from chromosome 13, complete sequence Length = 155179 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacacatg 181 |||||||||||||||||||||| Sbjct: 135571 acatgcacaacacacacacatg 135592
>emb|AL031772.6|HS225E12 Human DNA sequence from clone RP1-225E12 on chromosome 6q24 Contains the gene for hHDC for homolog of Drosophila headcase (LOC51696) and part of a novel gene, complete sequence Length = 126464 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 158 gaacatgcacaacacacacaca 179 |||||||||||||||||||||| Sbjct: 47170 gaacatgcacaacacacacaca 47149
>emb|BX883051.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 10/11 Length = 348946 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacacatg 181 |||||||||||||||||||||| Sbjct: 262162 acatgcacaacacacacacatg 262141
>gb|AC016178.9| Homo sapiens chromosome 8, clone RP11-259L23, complete sequence Length = 171035 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 259 tggcctctggctcctgaaagtggaat 284 ||||||||||||||| |||||||||| Sbjct: 58324 tggcctctggctcctaaaagtggaat 58349
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 acgtaaagggaagtagggaaca 70 |||||||||||||||||||||| Sbjct: 18312897 acgtaaagggaagtagggaaca 18312876
>gb|AC154626.2| Mus musculus BAC clone RP23-311B8 from chromosome 14, complete sequence Length = 194638 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacacatg 181 |||||||||||||||||||||| Sbjct: 157404 acatgcacaacacacacacatg 157383
>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463G11 Length = 154188 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 acgtaaagggaagtagggaaca 70 |||||||||||||||||||||| Sbjct: 27633 acgtaaagggaagtagggaaca 27612
>gb|AC166238.7| Mus musculus chromosome 1, clone RP23-469H11, complete sequence Length = 181980 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 aacatgcacaacacacacaca 179 ||||||||||||||||||||| Sbjct: 164437 aacatgcacaacacacacaca 164457
>gb|AC097832.7| Rattus norvegicus 11 BAC CH230-68C19 (Children's Hospital Oakland Research Institute) complete sequence Length = 262323 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacacat 180 ||||||||||||||||||||| Sbjct: 111858 acatgcacaacacacacacat 111878 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 37152 acatgcacaacacacacaca 37133
>gb|AC122922.4| Mus musculus BAC clone RP23-34M5 from chromosome 1, complete sequence Length = 223959 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 aacatgcacaacacacacaca 179 ||||||||||||||||||||| Sbjct: 13212 aacatgcacaacacacacaca 13232
>gb|AC138401.9| Mus musculus chromosome 13, clone RP24-79G5, complete sequence Length = 209942 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 aacatgcacaacacacacaca 179 ||||||||||||||||||||| Sbjct: 39990 aacatgcacaacacacacaca 39970
>gb|AC120411.9| Mus musculus chromosome 6, clone RP24-447O2, complete sequence Length = 202938 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacacat 180 ||||||||||||||||||||| Sbjct: 143016 acatgcacaacacacacacat 142996
>gb|AC069208.24| Homo sapiens 12 BAC RP11-778H2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167182 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 269 ctcctgaaagtggaattcagg 289 ||||||||||||||||||||| Sbjct: 75771 ctcctgaaagtggaattcagg 75751
>gb|AC126439.3| Mus musculus BAC clone RP24-290I17 from chromosome 14, complete sequence Length = 163978 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacacat 180 ||||||||||||||||||||| Sbjct: 129518 acatgcacaacacacacacat 129538
>gb|AC006151.4| Homo sapiens BAC clone GS1-286B23 from 7, complete sequence Length = 136006 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 atgcacaacacacacacatgt 182 ||||||||||||||||||||| Sbjct: 1891 atgcacaacacacacacatgt 1871
>gb|AC108919.7| Mus musculus chromosome 6, clone RP23-52O21, complete sequence Length = 141653 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacacat 180 ||||||||||||||||||||| Sbjct: 27452 acatgcacaacacacacacat 27432
>gb|AY861316.1| Cottus gobio microsatellite LCE76 sequence Length = 600 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 aacatgcacaacacacacaca 179 ||||||||||||||||||||| Sbjct: 67 aacatgcacaacacacacaca 47
>emb|AL449263.6| Human DNA sequence from clone RP3-353C17 on chromosome 20, complete sequence Length = 31445 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacacat 180 ||||||||||||||||||||| Sbjct: 4345 acatgcacaacacacacacat 4325
>emb|AL360269.21| Human DNA sequence from clone RP11-192I3 on chromosome 1 Contains the WNT9A gene for wingless-type MMTV integration site family, member 9A and a CpG island, complete sequence Length = 141703 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacacat 180 ||||||||||||||||||||| Sbjct: 63400 acatgcacaacacacacacat 63420
>emb|CR847825.6| Zebrafish DNA sequence from clone DKEY-98D20 in linkage group 6, complete sequence Length = 113362 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 catatttattcatgtatatat 28 ||||||||||||||||||||| Sbjct: 56229 catatttattcatgtatatat 56249
>emb|AL645982.26| Mouse DNA sequence from clone DN-452A22 on chromosome 3 Contains the 5' end of the Fgf2 gene for fibroblast growth factor 2, a novel gene (A930011G24RIK), a mitochondrial ribosomal protein S33 (Mrps33) pseudogene, a novel gene (gene model 1805 (NCBI) (Gm1805)), the Cetn4 gene for centrin 4, a novel gene, the 5' end of the Il21 gene for interleukin 21 and a CpG island, complete sequence Length = 133023 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 155 aacgaacatgcacaacacacacaca 179 |||||| |||||||||||||||||| Sbjct: 125554 aacgaatatgcacaacacacacaca 125578
>gb|AC027779.10| Homo sapiens chromosome 11, clone RP11-98J9, complete sequence Length = 149059 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 tcctttggcacctctggcatg 425 ||||||||||||||||||||| Sbjct: 98370 tcctttggcacctctggcatg 98390
>gb|AC155655.8| Mus musculus 6 BAC RP24-66L18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 203618 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacacat 180 ||||||||||||||||||||| Sbjct: 15493 acatgcacaacacacacacat 15473
>gb|AC153377.5| Mus musculus 6 BAC RP23-380O16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 195618 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacacat 180 ||||||||||||||||||||| Sbjct: 155952 acatgcacaacacacacacat 155932
>dbj|BS000085.1| Pan troglodytes chromosome 22 clone:RP43-164H01, map 22, complete sequences Length = 171357 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 acatatttattcatgtatata 27 ||||||||||||||||||||| Sbjct: 129611 acatatttattcatgtatata 129591
>emb|AL953869.12| Zebrafish DNA sequence from clone CH211-261J13 in linkage group 7, complete sequence Length = 171417 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 aacatgcacaacacacacaca 179 ||||||||||||||||||||| Sbjct: 107631 aacatgcacaacacacacaca 107651
>gb|AC008056.6|AC008056 Homo sapiens chromosome 14 clone RP11-242P2 containing gene for neurexin III gene, partial cds, complete sequence Length = 163584 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacacat 180 ||||||||||||||||||||| Sbjct: 8433 acatgcacaacacacacacat 8453
>emb|BX511097.21| Zebrafish DNA sequence from clone DKEYP-93C5 in linkage group 2, complete sequence Length = 134883 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 aacatgcacaacacacacaca 179 ||||||||||||||||||||| Sbjct: 87842 aacatgcacaacacacacaca 87862
>emb|AL928998.9| Mouse DNA sequence from clone RP23-58A8 on chromosome 2, complete sequence Length = 115361 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 10 tatttattcatgtatatatcacata 34 ||||||| ||||||||||||||||| Sbjct: 39461 tatttatacatgtatatatcacata 39437
>emb|AL953842.8| Zebrafish DNA sequence from clone DKEY-33I11, complete sequence Length = 225654 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 192 actctaacaatcatacacacatgta 216 ||||| ||||||||||||||||||| Sbjct: 56148 actctcacaatcatacacacatgta 56124
>gb|AC131654.7| Mus musculus BAC clone RP23-232K4 from 10, complete sequence Length = 205819 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 aacatgcacaacacacacaca 179 ||||||||||||||||||||| Sbjct: 64951 aacatgcacaacacacacaca 64971
>emb|AL662862.16| Mouse DNA sequence from clone CT7-139P23 on chromosome 3, complete sequence Length = 120808 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 155 aacgaacatgcacaacacacacaca 179 |||||| |||||||||||||||||| Sbjct: 44558 aacgaatatgcacaacacacacaca 44582
>gb|AC161810.10| Mus musculus chromosome 3, clone RP24-363L5, complete sequence Length = 151433 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 42709 acatgcacaacacacacaca 42728
>gb|AC155249.2| Mus musculus BAC clone RP24-254A5 from chromosome 9, complete sequence Length = 191932 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 152161 acatgcacaacacacacaca 152180
>gb|AC102081.15| Mus musculus chromosome 18, clone RP23-43H5, complete sequence Length = 245125 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 76376 acatgcacaacacacacaca 76357
>gb|AC113536.10| Mus musculus chromosome 17, clone RP23-77L13, complete sequence Length = 153863 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 142533 acatgcacaacacacacaca 142514
>gb|AC168216.2| Mus musculus chromosome 1, clone wi1-680L13, complete sequence Length = 39977 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 36855 acatgcacaacacacacaca 36874
>ref|XM_506447.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1634_B10.112 mRNA Length = 1006 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 427 cagggtgtggcatttcaggcttcggcaactctggca 462 |||||||||||| |||||||| |||||||| |||| Sbjct: 603 cagggtgtggcacctcaggctttggcaactccggca 568 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 447 ttcggcaactctggcatggcagggtgcggcagctcg 482 ||||||||||| |||| ||||||||| |||| |||| Sbjct: 418 ttcggcaactccggcacggcagggtgaggcacctcg 383
>ref|XM_479031.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1005 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 427 cagggtgtggcatttcaggcttcggcaactctggca 462 |||||||||||| |||||||| |||||||| |||| Sbjct: 600 cagggtgtggcacctcaggctttggcaactccggca 565 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 447 ttcggcaactctggcatggcagggtgcggcagctcg 482 ||||||||||| |||| ||||||||| |||| |||| Sbjct: 415 ttcggcaactccggcacggcagggtgaggcacctcg 380
>gb|AF030694.2| Plasmodium falciparum strain Dd2 heat shock protein 86 (HSP86), O1 (o1), O3 (o3), O2 (o2), CG8 (cg8), CG4 (cg4), CG3 (cg3), putative chloroquine resistance transporter (crt), CG9 (cg9), CG1 (cg1), CG6 (cg6), CG2 (cg2), and CG7 (cg7) genes, complete cds Length = 47573 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 1 acgaaaacatatttattcatgtatatat 28 ||||||||||||||||| || ||||||| Sbjct: 42967 acgaaaacatatttattaatatatatat 42994
>gb|AC155164.5| Mus musculus BAC clone RP24-74L7 from chromosome 8, complete sequence Length = 193057 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 123775 acatgcacaacacacacaca 123794 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 123348 acatgcacaacacacacaca 123329
>gb|AC107684.7| Mus musculus chromosome 5, clone RP24-389O5, complete sequence Length = 121239 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 14720 acatgcacaacacacacaca 14701
>gb|AC147887.2| Xenopus tropicalis clone CH216-147L5, complete sequence Length = 176251 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 98729 acatgcacaacacacacaca 98710
>gb|AC124830.8| Mus musculus chromosome 17, clone RP24-165B21, complete sequence Length = 176889 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 9698 acatgcacaacacacacaca 9679
>gb|AC115858.14| Mus musculus chromosome 7, clone RP24-285C16, complete sequence Length = 175843 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 acacacacacatgtctagta 188 |||||||||||||||||||| Sbjct: 70603 acacacacacatgtctagta 70622
>gb|AC140182.2| Mus musculus BAC clone RP24-349I16 from chromosome 8, complete sequence Length = 151221 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 126031 acatgcacaacacacacaca 126050
>gb|AC134898.4| Mus musculus BAC clone RP23-478H2 from chromosome 14, complete sequence Length = 213348 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 ttcatgtatatatcacatac 35 |||||||||||||||||||| Sbjct: 145550 ttcatgtatatatcacatac 145531
>gb|AC161937.4| Pan troglodytes BAC clone CH251-441C24 from chromosome 7, complete sequence Length = 160868 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 actctggcatggcagggtgc 473 |||||||||||||||||||| Sbjct: 71607 actctggcatggcagggtgc 71588
>gb|AC161472.4| Pan troglodytes BAC clone CH251-584L3 from chromosome 7, complete sequence Length = 189756 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 actctggcatggcagggtgc 473 |||||||||||||||||||| Sbjct: 178147 actctggcatggcagggtgc 178128
>gb|AC122283.3| Mus musculus BAC clone RP23-242G6 from chromosome 10, complete sequence Length = 184346 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 133813 acatgcacaacacacacaca 133794
>gb|M75136.1|IH1CG Ictalurid herpesvirus 1 strain Auburn 1, complete genome Length = 134226 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 154 taacgaacatgcacaacacacaca 177 ||||||||||| |||||||||||| Sbjct: 105616 taacgaacatgtacaacacacaca 105593
>gb|AC120408.7| Mus musculus chromosome 5, clone RP24-433N14, complete sequence Length = 178077 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 ggggcagctcggctttgggg 314 |||||||||||||||||||| Sbjct: 167418 ggggcagctcggctttgggg 167399
>gb|AC118249.11| Mus musculus chromosome 19, clone RP23-397G23, complete sequence Length = 224129 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 151363 acatgcacaacacacacaca 151344
>gb|AC005077.5| Homo sapiens BAC clone CTA-228D17 from 7, complete sequence Length = 240379 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 aacatgcacaacacacacac 178 |||||||||||||||||||| Sbjct: 103548 aacatgcacaacacacacac 103567
>gb|AC134325.2| Mus musculus BAC clone RP24-235L14 from chromosome 5, complete sequence Length = 106345 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 87007 acatgcacaacacacacaca 87026
>emb|CR627484.12| Zebrafish DNA sequence from clone CH211-281M7 in linkage group 16, complete sequence Length = 152450 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 aacatgcacaacacacacac 178 |||||||||||||||||||| Sbjct: 60296 aacatgcacaacacacacac 60315
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 449 cggcaactctggcatggcagggtg 472 ||||||||||||||| |||||||| Sbjct: 2022355 cggcaactctggcatcgcagggtg 2022332
>emb|CR956427.7| Pig DNA sequence from clone CH242-51O7 on chromosome 6, complete sequence Length = 187800 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 atggcttggcctctggctcc 272 |||||||||||||||||||| Sbjct: 79120 atggcttggcctctggctcc 79139
>gb|AC125087.2| Mus musculus BAC clone RP24-143E18 from chromosome 14, complete sequence Length = 180794 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 79897 acatgcacaacacacacaca 79916
>gb|AC125147.4| Mus musculus BAC clone RP24-350A15 from chromosome 7, complete sequence Length = 184180 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 29536 acatgcacaacacacacaca 29555
>gb|AC125158.3| Mus musculus BAC clone RP24-391P1 from chromosome 5, complete sequence Length = 160775 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 10075 acatgcacaacacacacaca 10094
>gb|AC124384.4| Mus musculus BAC clone RP24-413G2 from chromosome 12, complete sequence Length = 183707 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 97232 acatgcacaacacacacaca 97213
>gb|AC123826.4| Mus musculus BAC clone RP24-97K3 from chromosome 8, complete sequence Length = 188704 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 69227 acatgcacaacacacacaca 69246
>gb|AC124578.4| Mus musculus BAC clone RP23-166C2 from 18, complete sequence Length = 213229 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 atatttattcatgtatatat 28 |||||||||||||||||||| Sbjct: 67802 atatttattcatgtatatat 67783
>gb|AC117809.6| Mus musculus chromosome 19, clone RP24-571N5, complete sequence Length = 216153 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 36134 acatgcacaacacacacaca 36115
>gb|AC090654.38| Mus musculus strain C57BL/6J clone rp23-329p1 map 14, complete sequence Length = 204267 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 54242 acatgcacaacacacacaca 54223
>emb|CR394546.9| Zebrafish DNA sequence from clone CH211-212I14 in linkage group 16, complete sequence Length = 174132 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 catgcacaacacacacacat 180 |||||||||||||||||||| Sbjct: 15028 catgcacaacacacacacat 15047
>gb|AC163161.4| Mus musculus BAC clone RP23-103A23 from chromosome 6, complete sequence Length = 224416 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 153787 acatgcacaacacacacaca 153806
>gb|AC158771.2| Mus musculus chromosome 15, clone RP23-450E19, complete sequence Length = 199600 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 acacacacacatgtctagtatata 192 |||||||||||||| ||||||||| Sbjct: 112562 acacacacacatgtatagtatata 112539
>gb|AC165444.2| Mus musculus BAC clone CH25-441A19 from chromosome 5, complete sequence Length = 98389 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 61032 acatgcacaacacacacaca 61051
>ref|NM_010605.3| Mus musculus potassium inwardly-rectifying channel, subfamily J, member 5 (Kcnj5), mRNA Length = 4497 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 3577 acatgcacaacacacacaca 3558
>gb|AC091520.10| Mus musculus strain 129/SvJ clone mgs1-480e13, complete sequence Length = 105813 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 6057 acatgcacaacacacacaca 6076
>emb|AL389889.11| Human DNA sequence from clone RP11-164D18 on chromosome 20 Contains part of a novel gene similar to KIAA0233, complete sequence Length = 138347 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 atatttattcatgtatatat 28 |||||||||||||||||||| Sbjct: 66660 atatttattcatgtatatat 66641
>emb|AL354739.15| Human DNA sequence from clone RP11-379K8 on chromosome 13, complete sequence Length = 179790 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 aaacatatttattcatgtatatat 28 |||||||||||| ||||||||||| Sbjct: 3228 aaacatatttatacatgtatatat 3205
>emb|AL157699.13| Human DNA sequence from clone RP13-55H22 on chromosome Xq12-21.1 Contains the PJA1 gene for praja 1, a high-mobility group nucleosome binding domain 1 (HMGN1) pseudogene, the 5' end of a novel gene and a CpG island, complete sequence Length = 119185 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 73931 acatgcacaacacacacaca 73950
>emb|AL139102.13| Human DNA sequence from clone RP3-416F10 on chromosome 6 Contains a ribosomal L23a (RPL23A) pseudogene, complete sequence Length = 98490 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 84177 acatgcacaacacacacaca 84158
>emb|AL008637.1|HS833B7 Human DNA sequence from clone CTA-833B7 on chromosome 22q12.3-13.2 Contains the NCF4 gene for cytosolic neutrophil factor 4 (40kD), the 5' part of the CSF2RB gene for granulocyte-macrophage low-affinity colony stimulating factor 2 receptor beta, ESTs, STSs and GSSs, complete sequence Length = 86574 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 72460 acatgcacaacacacacaca 72441
>gb|AC159300.3| Mus musculus BAC clone RP23-242D23 from chromosome 6, complete sequence Length = 200738 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 163962 acatgcacaacacacacaca 163943
>emb|AL606480.11| Mouse DNA sequence from clone RP23-112C19 on chromosome 11 Contains the 3' end of the Col1a1 gene for procollagen type I alpha 1, the Sgca gene for alpha sarcoglycan (dystrophin-associated glycoprotein), the Hils1 gene for histone H1-like protein in spermatids 1, the Ppp1r9b gene for protein phosphatase 1 regulatory subunit 9B, a novel gene (A930041A10Rik, B930032I08Rik, C530046K03Rik), the Pdk2 gene for pyruvate dehydrogenase kinase isoenzyme 2, a novel gene, the Itga3 gene for integrin alpha 3, the Dlx3 gene for distal-less homeobox 3 and three CpG islands, complete sequence Length = 186276 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 catatttattcatgtatata 27 |||||||||||||||||||| Sbjct: 69056 catatttattcatgtatata 69037
>emb|AL731800.11| Mouse DNA sequence from clone RP23-358E7 on chromosome 11 Contains the gene for a novel protein, complete sequence Length = 204888 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 74243 acatgcacaacacacacaca 74224
>emb|AL772225.5| Mouse DNA sequence from clone RP23-235D17 on chromosome 11 Contains the 5' end of a novel gene and a novel gene, complete sequence Length = 132761 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 aaacatatttattcatgtatatat 28 |||||||| ||||||||||||||| Sbjct: 5725 aaacatatatattcatgtatatat 5748
>gb|AC105009.13| Homo sapiens chromosome 8, clone RP11-188K5, complete sequence Length = 175936 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 aaagggaagtagggaacaga 72 |||||||||||||||||||| Sbjct: 154022 aaagggaagtagggaacaga 154003
>emb|AL590625.16| Mouse DNA sequence from clone RP23-467M8 on chromosome 13 Contains the Foxf2 gene for forkhead box F2, a novel gene and two CpG islands, complete sequence Length = 165745 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 100224 acatgcacaacacacacaca 100243
>gb|AC162615.2| Mus musculus chromosome 7, clone RP23-94C20, complete sequence Length = 130735 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 113774 acatgcacaacacacacaca 113793
>gb|AC160537.6| Mus musculus chromosome 8, clone RP24-95H19, complete sequence Length = 188409 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 acacacatgtatagtatatg 225 |||||||||||||||||||| Sbjct: 8339 acacacatgtatagtatatg 8320
>gb|AC105235.7| Homo sapiens chromosome 8, clone CTD-2014D20, complete sequence Length = 121660 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 aaagggaagtagggaacaga 72 |||||||||||||||||||| Sbjct: 55752 aaagggaagtagggaacaga 55771
>gb|AC182768.3| Pan troglodytes BAC clone CH251-178I17 from chromosome 7, complete sequence Length = 186886 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 aacatgcacaacacacacac 178 |||||||||||||||||||| Sbjct: 50957 aacatgcacaacacacacac 50938
>gb|AC027419.11| Homo sapiens chromosome 8, clone RP11-654G14, complete sequence Length = 172880 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 22195 acatgcacaacacacacaca 22176
>gb|AC154913.4| Ornithorhynchus anatinus BAC clone OABb-535A1 from chromosome unknown, complete sequence Length = 199332 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 6555 acatgcacaacacacacaca 6536
>dbj|AK137113.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430084E08 product:unclassifiable, full insert sequence Length = 2702 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 acacacacacatgtctagtatata 192 |||||||||||||| ||||||||| Sbjct: 149 acacacacacatgtatagtatata 172
>gb|AF403131.1| Mus musculus G protein-gated K+ channel subunit 4 GIRK4 (Kcnj5) gene, complete cds Length = 20873 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 19675 acatgcacaacacacacaca 19656
>gb|AC027763.9| Homo sapiens chromosome 17, clone RP11-530N7, complete sequence Length = 169770 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 acacacacacatgtctagtatata 192 |||||||||||| ||||||||||| Sbjct: 165240 acacacacacatatctagtatata 165217
>dbj|AK137600.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830164E09 product:potassium inwardly-rectifying channel, subfamily J, member 5, full insert sequence Length = 4710 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 3714 acatgcacaacacacacaca 3695
>dbj|AK164058.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430039D23 product:potassium inwardly-rectifying channel, subfamily J, member 5, full insert sequence Length = 4497 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 3577 acatgcacaacacacacaca 3558
>gb|AC102680.10| Mus musculus chromosome 8, clone RP24-88L18, complete sequence Length = 201260 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 acacacatgtatagtatatg 225 |||||||||||||||||||| Sbjct: 107358 acacacatgtatagtatatg 107339
>gb|AC139197.10| Mus musculus chromosome 15, clone RP24-119N11, complete sequence Length = 172693 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 86754 acatgcacaacacacacaca 86773 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 86608 acatgcacaacacacacaca 86627
>gb|AC007147.8|AC007147 Drosophila melanogaster, chromosome 2L, region 32A-, BAC clone BACR19N18, complete sequence Length = 196248 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 cgaacatgcacaacacacacacat 180 |||||||||| ||||||||||||| Sbjct: 4032 cgaacatgcagaacacacacacat 4009
>gb|AC158124.6| Mus musculus chromosome 7, clone RP24-71O4, complete sequence Length = 156165 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 126345 acatgcacaacacacacaca 126326
>gb|AC007186.9|AC007186 Drosophila melanogaster, chromosome 2L, region 32A-, BAC clone BACR03D06, complete sequence Length = 176306 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 cgaacatgcacaacacacacacat 180 |||||||||| ||||||||||||| Sbjct: 82721 cgaacatgcagaacacacacacat 82744
>gb|AC034305.6|AC034305 Homo sapiens chromosome 17, clone RP11-609D21, complete sequence Length = 103699 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 acacacacacatgtctagtatata 192 |||||||||||| ||||||||||| Sbjct: 65661 acacacacacatatctagtatata 65684
>gb|AC062033.2| Homo sapiens BAC clone RP11-544E11 from 2, complete sequence Length = 208492 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 atatttattcatgtatatat 28 |||||||||||||||||||| Sbjct: 180875 atatttattcatgtatatat 180894
>gb|AC114783.5| Homo sapiens BAC clone RP11-600N14 from 2, complete sequence Length = 106643 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 16523 acatgcacaacacacacaca 16504
>gb|AC107672.6| Mus musculus chromosome 1, clone RP24-95P4, complete sequence Length = 178519 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 166323 acatgcacaacacacacaca 166304
>gb|AC145375.5| Pan troglodytes BAC clone RP43-57M5 from chromosome 7, complete sequence Length = 217260 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 aacatgcacaacacacacac 178 |||||||||||||||||||| Sbjct: 71882 aacatgcacaacacacacac 71901
>gb|AC090659.19| Mus musculus strain C57BL/6J chromosome 14 clone rp23-473n18, complete sequence Length = 194320 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 169450 acatgcacaacacacacaca 169431
>gb|AE014846.1| Plasmodium falciparum 3D7 chromosome 12, section 3 of 9 of the complete sequence Length = 253132 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 atatttattcatgtatatat 28 |||||||||||||||||||| Sbjct: 214842 atatttattcatgtatatat 214823
>gb|AC092580.3| Homo sapiens BAC clone RP11-16D24 from 2, complete sequence Length = 120492 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 115820 acatgcacaacacacacaca 115839 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 115750 acatgcacaacacacacaca 115769
>gb|AC138624.4| Mus musculus BAC clone RP23-187N1 from chromosome 7, complete sequence Length = 226264 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 179276 acatgcacaacacacacaca 179257
>gb|AC097449.3| Homo sapiens BAC clone CTD-2140E23 from 2, complete sequence Length = 104837 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 17328 acatgcacaacacacacaca 17309
>gb|AC011093.6|AC011093 Homo sapiens, clone RP11-1L24, complete sequence Length = 161151 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 aaacatatttattcatgtatatat 28 |||||||||||| ||||||||||| Sbjct: 47960 aaacatatttatacatgtatatat 47937
>emb|AL928618.10| Zebrafish DNA sequence from clone CH211-10O8, complete sequence Length = 103507 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aaaacatatttattcatgta 23 |||||||||||||||||||| Sbjct: 61653 aaaacatatttattcatgta 61672
>dbj|AB024024.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15C23 Length = 73921 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tatatactctaacaatcata 206 |||||||||||||||||||| Sbjct: 18515 tatatactctaacaatcata 18534
>dbj|AK110013.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-G12, full insert sequence Length = 3291 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 286 caggcttcgggggcagctcggctt 309 ||||| |||||||||||||||||| Sbjct: 1735 caggcatcgggggcagctcggctt 1712
>dbj|AK106010.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-B01, full insert sequence Length = 1005 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 427 cagggtgtggcatttcaggcttcggcaactctggca 462 |||||||||||| |||||||| |||||||| |||| Sbjct: 600 cagggtgtggcacctcaggctttggcaactccggca 565 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 447 ttcggcaactctggcatggcagggtgcggcagctcg 482 ||||||||||| |||| ||||||||| |||| |||| Sbjct: 415 ttcggcaactccggcacggcagggtgaggcacctcg 380
>gb|AC102844.11| Mus musculus chromosome 3, clone RP24-389H4, complete sequence Length = 199088 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 178470 acatgcacaacacacacaca 178489
>gb|AC003086.1|AC003086 Homo sapiens BAC clone CTB-104F4 from 7q21-q22, complete sequence Length = 110394 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 actctggcatggcagggtgc 473 |||||||||||||||||||| Sbjct: 53783 actctggcatggcagggtgc 53764
>dbj|AK068696.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162L16, full insert sequence Length = 1006 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 427 cagggtgtggcatttcaggcttcggcaactctggca 462 |||||||||||| |||||||| |||||||| |||| Sbjct: 603 cagggtgtggcacctcaggctttggcaactccggca 568 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 447 ttcggcaactctggcatggcagggtgcggcagctcg 482 ||||||||||| |||| ||||||||| |||| |||| Sbjct: 418 ttcggcaactccggcacggcagggtgaggcacctcg 383
>emb|BX247899.17| Zebrafish DNA sequence from clone CH211-229B6 in linkage group 19, complete sequence Length = 150160 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 60787 acatgcacaacacacacaca 60768
>gb|AC153593.4| Mus musculus 6 BAC RP23-131B11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205164 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 33075 acatgcacaacacacacaca 33094 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 33042 acatgcacaacacacacaca 33061
>gb|AC132114.4| Mus musculus BAC clone RP24-112A6 from chromosome 9, complete sequence Length = 192639 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 87422 acatgcacaacacacacaca 87441
>gb|AE003630.2| Drosophila melanogaster chromosome 2L, section 39 of 83 of the complete sequence Length = 289460 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 cgaacatgcacaacacacacacat 180 |||||||||| ||||||||||||| Sbjct: 145609 cgaacatgcagaacacacacacat 145632
>emb|AL049833.5|CNS0000D Human chromosome 14 DNA sequence BAC R-907D1 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 203266 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 atggcttggcctctggctcc 272 |||||||||||||||||||| Sbjct: 200704 atggcttggcctctggctcc 200685
>emb|AJ298130.1|MMU298130 Mus musculus partial Plapi gene for plasmolipin, exons 2-4 Length = 14551 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 6120 acatgcacaacacacacaca 6101
>dbj|AP001699.1| Homo sapiens genomic DNA, chromosome 21q, section 43/105 Length = 340000 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 catgtatatatcacatacat 37 |||||||||||||||||||| Sbjct: 120140 catgtatatatcacatacat 120121
>gb|AC120156.9| Mus musculus chromosome 18, clone RP24-263P17, complete sequence Length = 153019 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 123979 acatgcacaacacacacaca 123960
>gb|AC105298.21| Mus musculus strain C57BL/6J chromosome 5 clone rp23-224j9, complete sequence Length = 258789 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 ggggcagctcggctttgggg 314 |||||||||||||||||||| Sbjct: 142806 ggggcagctcggctttgggg 142825
>gb|AC102485.25| Mus musculus chromosome 5, clone RP24-469G19, complete sequence Length = 168799 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 8435 acatgcacaacacacacaca 8454
>emb|AL929311.8| Mouse DNA sequence from clone RP23-291N2 on chromosome 2, complete sequence Length = 103282 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 aaacatatttattcatgtat 24 |||||||||||||||||||| Sbjct: 66198 aaacatatttattcatgtat 66179
>gb|AC155259.1| Mus musculus BAC clone RP24-70C15 from 9, complete sequence Length = 222729 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 14237 acatgcacaacacacacaca 14256
>gb|AC139330.4| Mus musculus BAC clone RP24-206O6 from 12, complete sequence Length = 176663 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 106993 acatgcacaacacacacaca 106974
>emb|CT025673.8| Mouse DNA sequence from clone RP24-286H7 on chromosome 9, complete sequence Length = 148870 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 atatttattcatgtatatat 28 |||||||||||||||||||| Sbjct: 93260 atatttattcatgtatatat 93241
>gb|AC136147.4| Mus musculus BAC clone RP23-18B3 from 8, complete sequence Length = 210916 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 tcatgtatatatcacatacatcat 40 |||||||||||||| ||||||||| Sbjct: 47428 tcatgtatatatcatatacatcat 47405
>gb|AC138329.4| Mus musculus BAC clone RP23-227L14 from 13, complete sequence Length = 240321 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 catgcacaacacacacacat 180 |||||||||||||||||||| Sbjct: 64674 catgcacaacacacacacat 64655
>gb|AC132443.3| Mus musculus BAC clone RP23-157C23 from 6, complete sequence Length = 179231 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 31687 acatgcacaacacacacaca 31668 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 31654 acatgcacaacacacacaca 31635
>gb|AC149060.4| Mus musculus BAC clone RP23-242D8 from 7, complete sequence Length = 205543 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 16671 acatgcacaacacacacaca 16652
>gb|AC140409.3| Mus musculus BAC clone RP23-138K22 from 9, complete sequence Length = 200157 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 168048 acatgcacaacacacacaca 168029
>gb|AC161599.3| Mus musculus BAC clone RP23-346B16 from chromosome 9, complete sequence Length = 198471 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 141268 acatgcacaacacacacaca 141249 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 141153 acatgcacaacacacacaca 141134
>gb|AC163437.16| Mus musculus chromosome 5, clone RP23-119I18, complete sequence Length = 190996 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 188581 acatgcacaacacacacaca 188562
>gb|AC163446.2| Mus musculus chromosome 5, clone RP23-151G22, complete sequence Length = 190466 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 7443 acatgcacaacacacacaca 7424
>emb|AL928861.5| Mouse DNA sequence from clone RP24-153B19 on chromosome 2, complete sequence Length = 98816 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 87254 acatgcacaacacacacaca 87273
>emb|AL158800.6|CNS01RGM Human chromosome 14 DNA sequence BAC R-359N5 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 163979 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 atggcttggcctctggctcc 272 |||||||||||||||||||| Sbjct: 155682 atggcttggcctctggctcc 155701
>emb|AL808131.9| Mouse DNA sequence from clone RP23-367H7 on chromosome X, complete sequence Length = 210322 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 tctaacaatcatacacacat 213 |||||||||||||||||||| Sbjct: 187078 tctaacaatcatacacacat 187097
>gb|AC141646.4| Mus musculus BAC clone RP23-84E4 from chromosome 9, complete sequence Length = 193235 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 9408 acatgcacaacacacacaca 9427
>emb|AL671672.4| Mouse DNA sequence from clone RP23-461E2 on chromosome 4, complete sequence Length = 191255 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 157240 acatgcacaacacacacaca 157221
>emb|AL732506.10| Mouse DNA sequence from clone RP23-195K8 on chromosome 4, complete sequence Length = 178592 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 28373 acatgcacaacacacacaca 28354
>dbj|AP002350.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2552C2 Length = 109381 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 tatttattcatgtatatatc 29 |||||||||||||||||||| Sbjct: 87193 tatttattcatgtatatatc 87212
>dbj|AP001605.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1987H1, APP-D21S292 region, complete sequence Length = 165942 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 catgtatatatcacatacat 37 |||||||||||||||||||| Sbjct: 22162 catgtatatatcacatacat 22143
>dbj|AP001604.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1648B8, APP-D21S292 region, complete sequence Length = 186930 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 catgtatatatcacatacat 37 |||||||||||||||||||| Sbjct: 147927 catgtatatatcacatacat 147908
>dbj|AP003787.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1904C11, complete sequence Length = 104429 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 acatgcacaacacacacaca 179 |||||||||||||||||||| Sbjct: 20150 acatgcacaacacacacaca 20131 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,175,173 Number of Sequences: 3902068 Number of extensions: 14175173 Number of successful extensions: 133230 Number of sequences better than 10.0: 159 Number of HSP's better than 10.0 without gapping: 159 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 132595 Number of HSP's gapped (non-prelim): 635 length of query: 501 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 479 effective length of database: 17,147,199,772 effective search space: 8213508690788 effective search space used: 8213508690788 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
