Clone Name | rbart29a02 |
---|---|
Clone Library Name | barley_pub |
>DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related protein 2A)| (Dynamin-like protein 6) Length = 914 Score = 37.7 bits (86), Expect = 0.016 Identities = 18/26 (69%), Positives = 19/26 (73%), Gaps = 2/26 (7%) Frame = -3 Query: 418 ENGDANGANSGSRR--TPNRLPPAPP 347 +NGDA SGS R TPNRLPPAPP Sbjct: 881 QNGDAASPGSGSNRRTTPNRLPPAPP 906
>DRP2B_ARATH (Q9LQ55) Dynamin-2B (EC 3.6.5.5) (Dynamin-related protein 2B)| (Dynamin-like protein 3) Length = 920 Score = 35.0 bits (79), Expect = 0.11 Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 2/27 (7%) Frame = -3 Query: 418 ENG-DANGANSGSRRT-PNRLPPAPPK 344 +NG D++G+ SRRT PNRLPPAPP+ Sbjct: 887 QNGEDSSGSGGSSRRTTPNRLPPAPPQ 913
>LACR_STAXY (O33813) Lactose operon transcription activator| Length = 279 Score = 30.8 bits (68), Expect = 2.0 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Frame = +3 Query: 168 YITYIFL*TTEVLWIHT---IHAISRQLSILHPSLFSHQYHKGVRACHEKYDSHIA 326 Y+TYI + L IHT I ISRQ+ P LFS + K +Y H + Sbjct: 219 YLTYIRMYHASQLLIHTSTLISDISRQVGYKDPLLFSKNFTKHFEISASEYRHHFS 274
>RL27A_DROME (P41092) 60S ribosomal protein L27a| Length = 149 Score = 30.0 bits (66), Expect = 3.4 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 3/79 (3%) Frame = +3 Query: 252 HPSLFSHQYHKGVRACHEKYDSHIAN---QHP*YFGGAGGNRFGVRRLPELAPLASPFSY 422 H + H+ H G R H N HP YFG G F +RR + P Sbjct: 20 HGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFRP-----EI 74 Query: 423 RRPRLSALLDLDSFCELDR 479 +L +L+ + F EL++ Sbjct: 75 NLDKLWSLVGAEKFAELEK 93
>YMER_STAAU (P08655) Hypothetical 19.7 kDa protein in mercuric resistance| operon Length = 180 Score = 29.6 bits (65), Expect = 4.4 Identities = 11/40 (27%), Positives = 22/40 (55%) Frame = -1 Query: 444 VLTVGAGGMKMGTPMVPIQAADAHQIGCHLHRRNTKDVDW 325 V G G P+ P+ +AD+H + +L + N+K +++ Sbjct: 29 VYAAGDAAATDGLPLTPVASADSHVVASNLLKGNSKKIEY 68
>ADA12_MOUSE (Q61824) ADAM 12 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase domain 12) (Meltrin alpha) Length = 903 Score = 29.3 bits (64), Expect = 5.8 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = -1 Query: 486 LPTDPVHRTSQDREVLTVGAGGMKMGTPMVPIQAADAHQI 367 LP DP+ RTS+ L G + G PI+ A HQ+ Sbjct: 854 LPADPLSRTSRLTSALVRTPGQQEPGHRPAPIRPAPKHQV 893
>CAT8_YEAST (P39113) Regulatory protein CAT8| Length = 1433 Score = 29.3 bits (64), Expect = 5.8 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -3 Query: 418 ENGDANGANSGSRRTPNRLPPAPP 347 +NG +G NSGS +P PP PP Sbjct: 189 QNGKMDGDNSGSAMSPLGAPPPPP 212
>HAK8_ORYSA (Q8VXB5) Putative potassium transporter 8 (OsHAK8)| Length = 793 Score = 28.5 bits (62), Expect = 9.9 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 5/41 (12%) Frame = +1 Query: 370 LVCVGCLNWH---HWRPHFHTAGPDCQHFSIL--TRSVNWI 477 L+C+ L + HW PH + A C F L TR W+ Sbjct: 228 LICMSALGLYNIIHWNPHVYQALNPCYMFKFLKKTRKYGWM 268 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,819,623 Number of Sequences: 219361 Number of extensions: 1496765 Number of successful extensions: 3741 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3626 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3740 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)