Clone Name | rbart29a01 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_466721.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1071 Score = 153 bits (77), Expect = 7e-34 Identities = 173/205 (84%) Strand = Plus / Minus Query: 294 ttgcactagccaattacctgaacaggttcagatcagaatggatgaacgctgtgtgggata 353 |||||||| |||| |||||||||| ||| |||||| |||||||| || || || |||| Sbjct: 915 ttgcactaaccaactacctgaacatactcatatcagagtggatgaaagccgtttgagata 856 Query: 354 tgaatggaacgttaggatacattcctgaaagcgcacacctcatacactcgacaactgtga 413 || |||||| | |||||||| |||| || ||||||||||| ||||| | ||||||| Sbjct: 855 caaacggaacgctgggatacatgcctgccagagcacacctcatgcactcaagaactgtgg 796 Query: 414 agatctgaatgaaggccagtgtcatccagaaatatgccattggtttaccctgaaaaacaa 473 | |||||||||||||| | |||||||||||| | ||||||||||||||||| |||||| Sbjct: 795 atatctgaatgaaggcaatcgtcatccagaaaaacaccattggtttaccctgataaacaa 736 Query: 474 tgcttggattccagttgcacatggt 498 ||||||||||||||||||||||||| Sbjct: 735 tgcttggattccagttgcacatggt 711
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 153 bits (77), Expect = 7e-34 Identities = 173/205 (84%) Strand = Plus / Minus Query: 294 ttgcactagccaattacctgaacaggttcagatcagaatggatgaacgctgtgtgggata 353 |||||||| |||| |||||||||| ||| |||||| |||||||| || || || |||| Sbjct: 24289021 ttgcactaaccaactacctgaacatactcatatcagagtggatgaaagccgtttgagata 24288962 Query: 354 tgaatggaacgttaggatacattcctgaaagcgcacacctcatacactcgacaactgtga 413 || |||||| | |||||||| |||| || ||||||||||| ||||| | ||||||| Sbjct: 24288961 caaacggaacgctgggatacatgcctgccagagcacacctcatgcactcaagaactgtgg 24288902 Query: 414 agatctgaatgaaggccagtgtcatccagaaatatgccattggtttaccctgaaaaacaa 473 | |||||||||||||| | |||||||||||| | ||||||||||||||||| |||||| Sbjct: 24288901 atatctgaatgaaggcaatcgtcatccagaaaaacaccattggtttaccctgataaacaa 24288842 Query: 474 tgcttggattccagttgcacatggt 498 ||||||||||||||||||||||||| Sbjct: 24288841 tgcttggattccagttgcacatggt 24288817 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 239 ctctttctctcacacacacagtt 261 ||||||||||||||||||||||| Sbjct: 23668086 ctctttctctcacacacacagtt 23668108
>dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ2055_H10 Length = 119290 Score = 153 bits (77), Expect = 7e-34 Identities = 173/205 (84%) Strand = Plus / Minus Query: 294 ttgcactagccaattacctgaacaggttcagatcagaatggatgaacgctgtgtgggata 353 |||||||| |||| |||||||||| ||| |||||| |||||||| || || || |||| Sbjct: 89409 ttgcactaaccaactacctgaacatactcatatcagagtggatgaaagccgtttgagata 89350 Query: 354 tgaatggaacgttaggatacattcctgaaagcgcacacctcatacactcgacaactgtga 413 || |||||| | |||||||| |||| || ||||||||||| ||||| | ||||||| Sbjct: 89349 caaacggaacgctgggatacatgcctgccagagcacacctcatgcactcaagaactgtgg 89290 Query: 414 agatctgaatgaaggccagtgtcatccagaaatatgccattggtttaccctgaaaaacaa 473 | |||||||||||||| | |||||||||||| | ||||||||||||||||| |||||| Sbjct: 89289 atatctgaatgaaggcaatcgtcatccagaaaaacaccattggtttaccctgataaacaa 89230 Query: 474 tgcttggattccagttgcacatggt 498 ||||||||||||||||||||||||| Sbjct: 89229 tgcttggattccagttgcacatggt 89205
>dbj|AP004747.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0407A09 Length = 103788 Score = 153 bits (77), Expect = 7e-34 Identities = 173/205 (84%) Strand = Plus / Minus Query: 294 ttgcactagccaattacctgaacaggttcagatcagaatggatgaacgctgtgtgggata 353 |||||||| |||| |||||||||| ||| |||||| |||||||| || || || |||| Sbjct: 18559 ttgcactaaccaactacctgaacatactcatatcagagtggatgaaagccgtttgagata 18500 Query: 354 tgaatggaacgttaggatacattcctgaaagcgcacacctcatacactcgacaactgtga 413 || |||||| | |||||||| |||| || ||||||||||| ||||| | ||||||| Sbjct: 18499 caaacggaacgctgggatacatgcctgccagagcacacctcatgcactcaagaactgtgg 18440 Query: 414 agatctgaatgaaggccagtgtcatccagaaatatgccattggtttaccctgaaaaacaa 473 | |||||||||||||| | |||||||||||| | ||||||||||||||||| |||||| Sbjct: 18439 atatctgaatgaaggcaatcgtcatccagaaaaacaccattggtttaccctgataaacaa 18380 Query: 474 tgcttggattccagttgcacatggt 498 ||||||||||||||||||||||||| Sbjct: 18379 tgcttggattccagttgcacatggt 18355
>dbj|AK071805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108N22, full insert sequence Length = 1070 Score = 153 bits (77), Expect = 7e-34 Identities = 173/205 (84%) Strand = Plus / Minus Query: 294 ttgcactagccaattacctgaacaggttcagatcagaatggatgaacgctgtgtgggata 353 |||||||| |||| |||||||||| ||| |||||| |||||||| || || || |||| Sbjct: 915 ttgcactaaccaactacctgaacatactcatatcagagtggatgaaagccgtttgagata 856 Query: 354 tgaatggaacgttaggatacattcctgaaagcgcacacctcatacactcgacaactgtga 413 || |||||| | |||||||| |||| || ||||||||||| ||||| | ||||||| Sbjct: 855 caaacggaacgctgggatacatgcctgccagagcacacctcatgcactcaagaactgtgg 796 Query: 414 agatctgaatgaaggccagtgtcatccagaaatatgccattggtttaccctgaaaaacaa 473 | |||||||||||||| | |||||||||||| | ||||||||||||||||| |||||| Sbjct: 795 atatctgaatgaaggcaatcgtcatccagaaaaacaccattggtttaccctgataaacaa 736 Query: 474 tgcttggattccagttgcacatggt 498 ||||||||||||||||||||||||| Sbjct: 735 tgcttggattccagttgcacatggt 711
>gb|AY104900.1| Zea mays PCO136752 mRNA sequence Length = 1164 Score = 101 bits (51), Expect = 2e-18 Identities = 156/191 (81%) Strand = Plus / Minus Query: 308 tacctgaacaggttcagatcagaatggatgaacgctgtgtgggatatgaatggaacgtta 367 ||||||||||| ||||||||||| || ||||| || ||||||||||||||||| || ||| Sbjct: 987 tacctgaacagattcagatcagagtgaatgaaagcggtgtgggatatgaatgggacatta 928 Query: 368 ggatacattcctgaaagcgcacacctcatacactcgacaactgtgaagatctgaatgaag 427 ||||||||||| | || || || | || |||||||| |||||||||||||| ||||| Sbjct: 927 ggatacattccacacagagcgcagcgcaaacactcgagcactgtgaagatctgtatgaac 868 Query: 428 gccagtgtcatccagaaatatgccattggtttaccctgaaaaacaatgcttggattccag 487 || | | ||||||||| || |||||| || |||||| |||| |||||||| ||||| Sbjct: 867 gcgatagacatccagaagtactgcattggcttcccctgataaacgatgcttggcatccag 808 Query: 488 ttgcacatggt 498 | |||||||| Sbjct: 807 gtacacatggt 797
>ref|XM_507375.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1092_A07.131 mRNA Length = 1250 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Minus Query: 308 tacctgaacaggttcagatcagaatggatgaacgctgtgtgggatatgaatggaacgtta 367 ||||||||||| ||||||||||||||||| || || ||||| |||||||| || || || Sbjct: 1049 tacctgaacagattcagatcagaatggataaatgccgtgtgagatatgaaagggacattc 990 Query: 368 ggatacattcctgaaagcgcacacctcatacactcgacaactgtgaagatctgaatgaag 427 || ||||| || | ||| || || | ||| ||||||| |||||||||||||| ||||| Sbjct: 989 gggtacatcccagcaagagcgcatcgcatgcactcgagcactgtgaagatctgtatgaaa 930 Query: 428 gccagtgtcatccagaaata 447 || | | |||||||||||| Sbjct: 929 gcaatagccatccagaaata 910
>ref|XM_478751.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1147 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Minus Query: 308 tacctgaacaggttcagatcagaatggatgaacgctgtgtgggatatgaatggaacgtta 367 ||||||||||| ||||||||||||||||| || || ||||| |||||||| || || || Sbjct: 938 tacctgaacagattcagatcagaatggataaatgccgtgtgagatatgaaagggacattc 879 Query: 368 ggatacattcctgaaagcgcacacctcatacactcgacaactgtgaagatctgaatgaag 427 || ||||| || | ||| || || | ||| ||||||| |||||||||||||| ||||| Sbjct: 878 gggtacatcccagcaagagcgcatcgcatgcactcgagcactgtgaagatctgtatgaaa 819 Query: 428 gccagtgtcatccagaaata 447 || | | |||||||||||| Sbjct: 818 gcaatagccatccagaaata 799
>ref|XM_506416.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1092_A07.131 mRNA Length = 1351 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Minus Query: 308 tacctgaacaggttcagatcagaatggatgaacgctgtgtgggatatgaatggaacgtta 367 ||||||||||| ||||||||||||||||| || || ||||| |||||||| || || || Sbjct: 1039 tacctgaacagattcagatcagaatggataaatgccgtgtgagatatgaaagggacattc 980 Query: 368 ggatacattcctgaaagcgcacacctcatacactcgacaactgtgaagatctgaatgaag 427 || ||||| || | ||| || || | ||| ||||||| |||||||||||||| ||||| Sbjct: 979 gggtacatcccagcaagagcgcatcgcatgcactcgagcactgtgaagatctgtatgaaa 920 Query: 428 gccagtgtcatccagaaata 447 || | | |||||||||||| Sbjct: 919 gcaatagccatccagaaata 900
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 308 tacctgaacaggttcagatcagaatggatgaacgctgtgtgggatatgaatggaacgtta 367 ||||||||||| ||||||||||||||||| || || ||||| |||||||| || || || Sbjct: 22798056 tacctgaacagattcagatcagaatggataaatgccgtgtgagatatgaaagggacattc 22798115 Query: 368 ggatacattcctgaaagcgcacacctcatacactcgacaactgtgaagatctgaatgaag 427 || ||||| || | ||| || || | ||| ||||||| |||||||||||||| ||||| Sbjct: 22798116 gggtacatcccagcaagagcgcatcgcatgcactcgagcactgtgaagatctgtatgaaa 22798175 Query: 428 gccagtgtcatccagaaata 447 || | | |||||||||||| Sbjct: 22798176 gcaatagccatccagaaata 22798195
>dbj|AP003866.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1092_A07 Length = 137081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 308 tacctgaacaggttcagatcagaatggatgaacgctgtgtgggatatgaatggaacgtta 367 ||||||||||| ||||||||||||||||| || || ||||| |||||||| || || || Sbjct: 117398 tacctgaacagattcagatcagaatggataaatgccgtgtgagatatgaaagggacattc 117457 Query: 368 ggatacattcctgaaagcgcacacctcatacactcgacaactgtgaagatctgaatgaag 427 || ||||| || | ||| || || | ||| ||||||| |||||||||||||| ||||| Sbjct: 117458 gggtacatcccagcaagagcgcatcgcatgcactcgagcactgtgaagatctgtatgaaa 117517 Query: 428 gccagtgtcatccagaaata 447 || | | |||||||||||| Sbjct: 117518 gcaatagccatccagaaata 117537
>dbj|AK109391.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-H03, full insert sequence Length = 1273 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Minus Query: 308 tacctgaacaggttcagatcagaatggatgaacgctgtgtgggatatgaatggaacgtta 367 ||||||||||| ||||||||||||||||| || || ||||| |||||||| || || || Sbjct: 995 tacctgaacagattcagatcagaatggataaatgccgtgtgagatatgaaagggacattc 936 Query: 368 ggatacattcctgaaagcgcacacctcatacactcgacaactgtgaagatctgaatgaag 427 || ||||| || | ||| || || | ||| ||||||| |||||||||||||| ||||| Sbjct: 935 gggtacatcccagcaagagcgcatcgcatgcactcgagcactgtgaagatctgtatgaaa 876 Query: 428 gccagtgtcatccagaaata 447 || | | |||||||||||| Sbjct: 875 gcaatagccatccagaaata 856
>dbj|AK100091.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003J19, full insert sequence Length = 1249 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Minus Query: 308 tacctgaacaggttcagatcagaatggatgaacgctgtgtgggatatgaatggaacgtta 367 ||||||||||| ||||||||||||||||| || || ||||| |||||||| || || || Sbjct: 1048 tacctgaacagattcagatcagaatggataaatgccgtgtgagatatgaaagggacattc 989 Query: 368 ggatacattcctgaaagcgcacacctcatacactcgacaactgtgaagatctgaatgaag 427 || ||||| || | ||| || || | ||| ||||||| |||||||||||||| ||||| Sbjct: 988 gggtacatcccagcaagagcgcatcgcatgcactcgagcactgtgaagatctgtatgaaa 929 Query: 428 gccagtgtcatccagaaata 447 || | | |||||||||||| Sbjct: 928 gcaatagccatccagaaata 909
>dbj|AK059994.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-E09, full insert sequence Length = 1147 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Minus Query: 308 tacctgaacaggttcagatcagaatggatgaacgctgtgtgggatatgaatggaacgtta 367 ||||||||||| ||||||||||||||||| || || ||||| |||||||| || || || Sbjct: 938 tacctgaacagattcagatcagaatggataaatgccgtgtgagatatgaaagggacattc 879 Query: 368 ggatacattcctgaaagcgcacacctcatacactcgacaactgtgaagatctgaatgaag 427 || ||||| || | ||| || || | ||| ||||||| |||||||||||||| ||||| Sbjct: 878 gggtacatcccagcaagagcgcatcgcatgcactcgagcactgtgaagatctgtatgaaa 819 Query: 428 gccagtgtcatccagaaata 447 || | | |||||||||||| Sbjct: 818 gcaatagccatccagaaata 799
>gb|BT017280.1| Zea mays clone EL01N0314B02.c mRNA sequence Length = 1047 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 349 ggatatgaatggaacgttaggatacattcctgaaagcgcacacctcatacactcgacaac 408 |||||||||||| || ||||||| |||||| |||| ||||||| || |||||||| || Sbjct: 1040 ggatatgaatgggacattaggattcattccacaaagagcacaccgcaaacactcgagcac 981 Query: 409 tgtgaagatctgaatgaa 426 |||||||||||| ||||| Sbjct: 980 tgtgaagatctgtatgaa 963
>gb|BT017366.1| Zea mays clone EL01N0324F07.c mRNA sequence Length = 1159 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 308 tacctgaacaggttcagatcagaatggatgaacgctgtgtgggatatgaatggaacgtta 367 ||||||||| | ||||||||| | || ||||| || | | ||||||||||||| || ||| Sbjct: 967 tacctgaacggattcagatcaaagtgaatgaaagcggggggggatatgaatgggacatta 908 Query: 368 ggatacattcctgaaagcgcacacctcatacactcgacaactgtgaagatctgaatgaa 426 ||||||||||| | || || || | || |||||||| |||||||||||||| ||||| Sbjct: 907 ggatacattccacacagagcgcagcgcaaacactcgagcactgtgaagatctgtatgaa 849
>gb|AC022453.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-253G12, complete sequence Length = 199642 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 232 tctatatctctttctctcacacacaca 258 ||||||||||||||||||||||||||| Sbjct: 158942 tctatatctctttctctcacacacaca 158916
>emb|BX255893.5| Zebrafish DNA sequence from clone CH211-272H10 in linkage group 4, complete sequence Length = 99176 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 231 ctctatatctctttctctcacacacaca 258 |||||||||||| ||||||||||||||| Sbjct: 47688 ctctatatctctctctctcacacacaca 47715
>gb|AC141896.5| Mus musculus BAC clone RP23-238B2 from 5, complete sequence Length = 240890 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 237 atctctttctctcacacacacagt 260 |||||||||||||||||||||||| Sbjct: 208403 atctctttctctcacacacacagt 208426
>emb|AL954838.14| Zebrafish DNA sequence from clone DKEY-12B15 in linkage group 23, complete sequence Length = 268324 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 231 ctctatatctctttctctcacacacaca 258 |||||||||||| ||||||||||||||| Sbjct: 4343 ctctatatctctctctctcacacacaca 4370
>emb|AL844847.6| Zebrafish DNA sequence from clone DKEY-13A21 in linkage group 11 Contains three novel genes, the opn1lw1 gene for opsin 1 (cone pigments), long-wave-sensitive, 1, a gene for novel protein similar to human and rodent member RAS oncogene family RAB7 (RAB7), a gene for novel protein remotely similar to human host cell factor 1 (VP16-accessory protein) (HCFC1), the opn1sw2 gene for opsin 1 (cone pigments), short-wave-sensitive 1, a gene for novel protein similar to human and mouse CpG binding protein (CGBP), a gene for novel protein similar to vertebrate microphthalmia-associated transcription factor (MITF) and zebrafish transcription factor binding to IGHM enhancer 3a (tfe3a), a gene for novel protein similar to human and rodent catechol-O-methyltransferase (COMT), the flj10613l gene for hypothetical protein FLJ10613-like (H. sapiens), a gene for novel protein similar to human and mouse methyl-CpG binding domain protein 1 (MBD1), a gene for novel protein similar to zebrafish red-sensitive opsin (rdops), a gene for novel protein similar to mouse and human host cell factor C1 (VP16-accessory protein) (HCFC1), a gene for novel protein similar to human and rodent metabotropic glutamate receptors (GRM) and two CpG islands, complete sequence Length = 235174 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacacagt 260 ||||||||||||||||||||||| Sbjct: 134851 tctctttctctcacacacacagt 134829
>emb|BX510998.12| Zebrafish DNA sequence from clone CH211-272L18 in linkage group 12, complete sequence Length = 148753 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacacagt 260 ||||||||||||||||||||||| Sbjct: 42361 tctctttctctcacacacacagt 42383
>emb|BX511109.4| Zebrafish DNA sequence from clone DKEY-288G16 in linkage group 7, complete sequence Length = 124061 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacacagt 260 ||||||||||||||||||||||| Sbjct: 46633 tctctttctctcacacacacagt 46655
>emb|BX324129.11| Zebrafish DNA sequence from clone CH211-221D5 in linkage group 2, complete sequence Length = 111186 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacacagt 260 ||||||||||||||||||||||| Sbjct: 3764 tctctttctctcacacacacagt 3786
>emb|BX548012.11| Zebrafish DNA sequence from clone DKEY-271O4 in linkage group 18, complete sequence Length = 154557 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacacagt 260 ||||||||||||||||||||||| Sbjct: 106554 tctctttctctcacacacacagt 106532
>dbj|AP004124.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1669_F01 Length = 140019 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 239 ctctttctctcacacacacagtt 261 ||||||||||||||||||||||| Sbjct: 109186 ctctttctctcacacacacagtt 109208
>emb|BX571854.11| Zebrafish DNA sequence from clone CH211-195O19 in linkage group 20, complete sequence Length = 194209 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacacagt 260 ||||||||||||||||||||||| Sbjct: 81888 tctctttctctcacacacacagt 81910
>emb|AL807798.17| Zebrafish DNA sequence from clone CH211-250N8, complete sequence Length = 173032 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacacagt 260 ||||||||||||||||||||||| Sbjct: 25922 tctctttctctcacacacacagt 25944
>gb|AC112949.9| Mus musculus chromosome 17, clone RP23-294D3, complete sequence Length = 169739 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 237 atctctttctctcacacacaca 258 |||||||||||||||||||||| Sbjct: 117531 atctctttctctcacacacaca 117552
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 24 tcatttcaaattgcttgccgtt 45 |||||||||||||||||||||| Sbjct: 35581599 tcatttcaaattgcttgccgtt 35581620
>emb|BX005314.35| Zebrafish DNA sequence from clone CH211-155D24 in linkage group 6, complete sequence Length = 164188 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 237 atctctttctctcacacacaca 258 |||||||||||||||||||||| Sbjct: 73716 atctctttctctcacacacaca 73737
>emb|BX927082.9| Zebrafish DNA sequence from clone DKEY-182O15 in linkage group 13, complete sequence Length = 157140 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 229 agctctatatctctttctctcacacacaca 258 |||||||| ||||| ||||||||||||||| Sbjct: 40078 agctctatctctctctctctcacacacaca 40107
>emb|AL604063.4| Mouse DNA sequence from clone RP23-467J12 on chromosome 11, complete sequence Length = 146759 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 237 atctctttctctcacacacaca 258 |||||||||||||||||||||| Sbjct: 32184 atctctttctctcacacacaca 32163
>emb|BX323072.9| Zebrafish DNA sequence from clone CH211-271G18, complete sequence Length = 131030 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 236 tatctctttctctcacacacac 257 |||||||||||||||||||||| Sbjct: 88392 tatctctttctctcacacacac 88413 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 91357 tctctttctctcacacacaca 91337
>emb|CR456682.4| Zebrafish DNA sequence from clone CH211-32G19 in linkage group 13, complete sequence Length = 193213 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Minus Query: 229 agctctatatctctttctctcacacacaca 258 |||||||| ||||| ||||||||||||||| Sbjct: 11556 agctctatctctctctctctcacacacaca 11527 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 48982 tctctttctctcacacacaca 49002
>emb|BX511027.20| Zebrafish DNA sequence from clone CH211-281P14 in linkage group 14, complete sequence Length = 198761 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 231 ctctatatctctttctctcacacaca 256 |||| ||||||||||||||||||||| Sbjct: 183962 ctctctatctctttctctcacacaca 183937
>emb|BX664606.17| Zebrafish DNA sequence from clone CH211-171L17 in linkage group 22, complete sequence Length = 181178 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacacag 259 |||||||||||||||||||||| Sbjct: 104107 tctctttctctcacacacacag 104086
>emb|BX323009.6| Zebrafish DNA sequence from clone DKEYP-70D5 in linkage group 6, complete sequence Length = 51246 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 237 atctctttctctcacacacaca 258 |||||||||||||||||||||| Sbjct: 21081 atctctttctctcacacacaca 21060
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 24 tcatttcaaattgcttgccgtt 45 |||||||||||||||||||||| Sbjct: 35671671 tcatttcaaattgcttgccgtt 35671692
>dbj|AB015197.2| Mus musculus gene for p70/p85 s6 kinase, 4 exons Length = 4543 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 237 atctctttctctcacacacaca 258 |||||||||||||||||||||| Sbjct: 3144 atctctttctctcacacacaca 3165
>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete sequence Length = 145290 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 24 tcatttcaaattgcttgccgtt 45 |||||||||||||||||||||| Sbjct: 114562 tcatttcaaattgcttgccgtt 114583
>emb|BX088547.12| Zebrafish DNA sequence from clone DKEY-238O14, complete sequence Length = 256446 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacacag 259 |||||||||||||||||||||| Sbjct: 119470 tctctttctctcacacacacag 119491
>emb|CT025726.15| Mouse DNA sequence from clone RP23-299H17 on chromosome 17, complete sequence Length = 127014 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 237 atctctttctctcacacacaca 258 |||||||||||||||||||||| Sbjct: 105403 atctctttctctcacacacaca 105382
>emb|CR854840.6| Zebrafish DNA sequence from clone CH211-276M8 in linkage group 10, complete sequence Length = 10571 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 233 ctatatctctttctctcacacacaca 258 |||| ||||||||||||||||||||| Sbjct: 2895 ctatctctctttctctcacacacaca 2920
>gb|AF000141.1|LEAF000141 Lycopersicon esculentum class I knotted-like homeodomain protein (LeT6) mRNA, complete cds Length = 1570 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 237 atctctttctctcacacacaca 258 |||||||||||||||||||||| Sbjct: 232 atctctttctctcacacacaca 211
>emb|AL772171.7| Mouse DNA sequence from clone RP23-36B3 on chromosome 4, complete sequence Length = 209864 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacacag 259 |||||||||||||||||||||| Sbjct: 158067 tctctttctctcacacacacag 158088
>emb|AL844882.9| Mouse DNA sequence from clone RP23-360H15 on chromosome 2, complete sequence Length = 167978 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 237 atctctttctctcacacacaca 258 |||||||||||||||||||||| Sbjct: 135294 atctctttctctcacacacaca 135315
>gb|AC110544.13| Mus musculus chromosome 3, clone RP23-112A11, complete sequence Length = 201027 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 140010 tctctttctctcacacacaca 140030
>gb|AC165230.12| Mus musculus chromosome 1, clone RP23-65C14, complete sequence Length = 174156 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 106205 tctctttctctcacacacaca 106185
>gb|AC130542.4| Mus musculus chromosome 6 clone RP24-167F4, complete sequence Length = 192106 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 16693 tctctttctctcacacacaca 16673
>gb|AY486893.1| Hevea brasiliensis clone gHbCIRTAs2697 microsatellite sequence Length = 313 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 237 tctctttctctcacacacaca 217
>gb|AF223661.1| Trichechus manatus latirostris clone TmaF34 microsatellite sequence Length = 501 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 148 tctctttctctcacacacaca 168
>gb|AE000660.1|HUAE000660 Homo sapiens T-cell receptor alpha delta locus from bases 501613 to 752736 (section 3 of 5) of the Complete Nucleotide Sequence Length = 251124 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 223046 tctctttctctcacacacaca 223066
>gb|AC103407.12| Mus musculus chromosome 1, clone RP23-230J23, complete sequence Length = 204077 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 95320 tctctttctctcacacacaca 95300
>gb|AY258750.1| Xiphophorus maculatus microsatellite Msc042 sequence Length = 557 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 327 tctctttctctcacacacaca 307
>gb|AC159817.2| Mus musculus BAC clone RP23-228E8 from chromosome 9, complete sequence Length = 193445 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 29498 tctctttctctcacacacaca 29478
>gb|AC161587.2| Mus musculus BAC clone RP24-492G17 from chromosome 9, complete sequence Length = 176237 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 163477 tctctttctctcacacacaca 163457
>gb|AC102334.10| Mus musculus chromosome 15, clone RP24-544N15, complete sequence Length = 162721 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 159308 tctctttctctcacacacaca 159288
>gb|AC131326.9| Mus musculus chromosome 17, clone RP23-454P14, complete sequence Length = 177335 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 65731 tctctttctctcacacacaca 65751
>gb|AC138386.7| Mus musculus chromosome 1, clone RP24-433D10, complete sequence Length = 142114 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 3440 tctctttctctcacacacaca 3420
>gb|AC115784.9| Mus musculus chromosome 15, clone RP23-170J10, complete sequence Length = 212803 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 ctctttctctcacacacacag 259 ||||||||||||||||||||| Sbjct: 199739 ctctttctctcacacacacag 199759
>gb|AC122508.3| Mus musculus BAC clone RP24-427G15 from chromosome 12, complete sequence Length = 169567 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 7069 tctctttctctcacacacaca 7089
>gb|AC125052.4| Mus musculus BAC clone RP23-388L12 from chromosome 5, complete sequence Length = 217001 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 200128 tctctttctctcacacacaca 200108
>gb|AC102505.8| Mus musculus chromosome 1, clone RP24-73K7, complete sequence Length = 209838 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 209132 tctctttctctcacacacaca 209112
>gb|AC134569.4| Mus musculus BAC clone RP24-240H21 from chromosome 16, complete sequence Length = 168794 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 138645 tctctttctctcacacacaca 138665
>gb|AC165280.3| Mus musculus chromosome 3, clone RP23-389C4, complete sequence Length = 201348 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 196592 tctctttctctcacacacaca 196612
>gb|AC120386.12| Mus musculus chromosome 9, clone RP24-294A16, complete sequence Length = 207310 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 64620 tctctttctctcacacacaca 64600
>gb|AC157583.9| Mus musculus chromosome 15, clone RP24-367L4, complete sequence Length = 185401 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 63368 tctctttctctcacacacaca 63348
>gb|AC160105.2| Mus musculus BAC clone RP24-353L12 from chromosome 13, complete sequence Length = 138509 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 234 tatatctctttctctcacacacaca 258 ||||||||| ||||||||||||||| Sbjct: 50567 tatatctctctctctcacacacaca 50591
>gb|AC099934.14| Mus musculus chromosome 12, clone RP23-17K9, complete sequence Length = 234795 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 155848 tctctttctctcacacacaca 155828
>gb|AC109139.15| Mus musculus chromosome 8, clone RP23-47L13, complete sequence Length = 268904 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 34488 tctctttctctcacacacaca 34508
>gb|AC162920.2| Mus musculus BAC clone RP23-357C16 from chromosome 9, complete sequence Length = 203466 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 114006 tctctttctctcacacacaca 114026
>gb|AC165294.4| Mus musculus BAC clone RP23-115J11 from chromosome 5, complete sequence Length = 205776 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 37648 tctctttctctcacacacaca 37628
>gb|AC162789.4| Mus musculus chromosome 1, clone RP24-323I23, complete sequence Length = 170236 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 156949 tctctttctctcacacacaca 156969
>gb|AC141899.4| Mus musculus BAC clone RP23-116G15 from chromosome 10, complete sequence Length = 210306 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 124260 tctctttctctcacacacaca 124240
>gb|AC006392.1| Homo sapiens BAC clone RP11-520M18 from 7, complete sequence Length = 117381 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 93918 tctctttctctcacacacaca 93898
>gb|AC146194.2| Pan troglodytes BAC clone CH251-490J23 from Y, complete sequence Length = 182769 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 81716 tctctttctctcacacacaca 81736
>gb|AC093819.4| Homo sapiens BAC clone RP11-368D18 from 4, complete sequence Length = 168474 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 91880 tctctttctctcacacacaca 91900
>gb|AC140444.2| Mus musculus BAC clone RP23-57N5 from chromosome 5, complete sequence Length = 174306 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 168679 tctctttctctcacacacaca 168699
>emb|CT009696.9| Mouse DNA sequence from clone RP23-11B13 on chromosome 9, complete sequence Length = 196093 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 32422 tctctttctctcacacacaca 32402
>emb|BX927336.18| Zebrafish DNA sequence from clone CH211-215P11 in linkage group 5, complete sequence Length = 200686 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 50005 tctctttctctcacacacaca 49985
>emb|BX537295.7| Zebrafish DNA sequence from clone DKEY-21O10 in linkage group 1, complete sequence Length = 165366 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 37680 tctctttctctcacacacaca 37660
>gb|AC109153.13| Mus musculus chromosome 15, clone RP23-51J23, complete sequence Length = 222164 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 183816 tctctttctctcacacacaca 183836
>gb|AC132269.3| Mus musculus BAC clone RP24-409M22 from chromosome 12, complete sequence Length = 172018 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 151654 tctctttctctcacacacaca 151674 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 82658 tctctttctctcacacacaca 82638
>gb|AC124571.5| Mus musculus BAC clone RP23-155I21 from chromosome 2, complete sequence Length = 181526 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 157056 tctctttctctcacacacaca 157076
>gb|AC127694.3| Mus musculus BAC clone RP23-235J3 from chromosome 7, complete sequence Length = 225732 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 155461 tctctttctctcacacacaca 155441
>gb|AC138342.11| Mus musculus chromosome 12, clone RP23-37C23, complete sequence Length = 208939 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 47581 tctctttctctcacacacaca 47601
>gb|AC115303.6| Mus musculus BAC clone RP24-108I6 from chromosome 1, complete sequence Length = 192812 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 34025 tctctttctctcacacacaca 34005
>emb|CR356243.16| Zebrafish DNA sequence from clone CH211-209O4 in linkage group 6, complete sequence Length = 216472 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 209827 tctctttctctcacacacaca 209847
>gb|AC121575.4| Mus musculus BAC clone RP23-241P4 from 1, complete sequence Length = 193725 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 14255 tctctttctctcacacacaca 14235
>gb|AC125215.4| Mus musculus BAC clone RP23-93K19 from 6, complete sequence Length = 215584 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 234 tatatctctttctctcacacacaca 258 ||||||||| ||||||||||||||| Sbjct: 82042 tatatctctctctctcacacacaca 82066
>emb|CR846087.30| Zebrafish DNA sequence from clone DKEY-196N19 in linkage group 8, complete sequence Length = 232595 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 91721 tctctttctctcacacacaca 91741
>emb|CR450739.19| Zebrafish DNA sequence from clone DKEY-175B17 in linkage group 13, complete sequence Length = 180895 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 230 gctctatatctctttctctcacacacaca 258 ||||||| ||||| ||||||||||||||| Sbjct: 96422 gctctatctctctctctctcacacacaca 96450
>gb|AC107753.10| Mus musculus chromosome 15, clone RP23-243P15, complete sequence Length = 173814 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 123039 tctctttctctcacacacaca 123019
>gb|AC115754.7| Mus musculus chromosome 12, clone RP23-34D20, complete sequence Length = 217173 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 98345 tctctttctctcacacacaca 98325
>gb|AC114638.16| Mus musculus chromosome 5, clone RP24-123E4, complete sequence Length = 184957 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 116473 tctctttctctcacacacaca 116493
>gb|AC154864.2| Mus musculus BAC clone RP23-7A5 from chromosome 12, complete sequence Length = 208597 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 15019 tctctttctctcacacacaca 15039
>emb|AL845454.6| Human DNA sequence from clone DAQB-90C11 on chromosome 6 Contains HLA-H for major histocompatibility complex, class I, H (pseudogene), HLA-16 pseudogene, HCP5P6 for HLA complex P5 pseudogene 6, HCG4P6 for HLA complex group 4 pseudogene 6, HLA-K for major histocompatibility complex, class I, K, HLA-21 pseudogene, HLA-A for major histocompatibility complex, class I, A, HCP5P3 for HLA complex P5 pseudogene 3, HLA-80 pseudogene, MICD for MHC class I polypeptide-related sequence D, HCG9 for HLA complex group 9, HCP5P2 for HLA complex P5 pseudogene 2, HLA-J for major histocompatibility complex, class I, J (pseudogene), HCG8 for HLA complex group 8, 5' end of C6orf12 for chromosome 6 open reading frame 12 and five CpG islands, complete sequence Length = 159427 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 96954 tctctttctctcacacacaca 96934
>emb|AL645935.7| Human DNA sequence from clone XXbac-67J3 on chromosome 6 contains four MHC class 1 pseudogenes, a P5-1 pseudogene, a putative novel transcript similar to HCGIV, a novel MHC class 1 protein, the HLA-A gene for major histocompatibility complex, class I, A, the gene for PERB11 family member in MHC class 1 region (HCGIX, HCGIX4), the HLA-J gene for major histocompatibility complex, class I, J (pseudogene), a novel transcript similar to HCGVIII, the 3' end of the gene for HTEX4.3 and four CpG islands, complete sequence Length = 129611 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 71746 tctctttctctcacacacaca 71726
>emb|AL671277.5| Human DNA sequence from clone XXbac-309N1 on chromosome 6 contains the gene for HCGIV protein, a MHC class 1 pseudogene, a novel MHC class 1 protein, the HLA-A gene for major histocompatibility complex, class I, A, a MHC class 1 pseudogene, a MHC class 1 pseudogene, a major histocompatibility complex class 1 polypeptide related sequence, a P5-1 pseudogene, the 5' end of a major histocompatibility complex, class I, J pseudogene and five CpG islands, complete sequence Length = 84827 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 42380 tctctttctctcacacacaca 42360
>emb|AL596179.3| Human DNA sequence from clone RP11-49A12 on chromosome 6, complete sequence Length = 169159 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 91934 tctctttctctcacacacaca 91914
>emb|AL590375.5| Human DNA sequence from clone RP11-546A8 on chromosome X, complete sequence Length = 63324 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 21301 tctctttctctcacacacaca 21321
>emb|AL451052.4| Human DNA sequence from clone RP11-24P14 on chromosome 1 Contains the 3' end of a novel gene, complete sequence Length = 109864 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 106001 tctctttctctcacacacaca 106021
>emb|AL445303.6| Human DNA sequence from clone RP11-306J4 on chromosome 6, complete sequence Length = 30713 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 234 tatatctctttctctcacacacaca 258 ||||||||| ||||||||||||||| Sbjct: 25856 tatatctctctctctcacacacaca 25880
>ref|NG_002398.2| Homo sapiens major histocompatibility complex, class I, GHKAJ (HLA-GHKAJ) on chromosome 6 Length = 184242 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 139291 tctctttctctcacacacaca 139271
>emb|AL354982.12| Human DNA sequence from clone RP11-473H13 on chromosome 9 Contains part of the gene for the likely ortholog of mouse polydom (POLYDOM), complete sequence Length = 119077 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 77182 tctctttctctcacacacaca 77202
>emb|AL356295.9| Human DNA sequence from clone RP11-768P11 on chromosome 13, complete sequence Length = 134347 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 13483 tctctttctctcacacacaca 13463
>gb|AC126241.4| Mus musculus chromosome UL clone RP24-248P10, complete sequence Length = 187641 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 123718 tctctttctctcacacacaca 123738
>emb|AL139394.15| Human DNA sequence from clone RP11-121C22 on chromosome Xq13.3-21.1 Contains an AUT-like 2, cysteine endopeptidase (S. cerevisiae) (AUTL2) pseudogene, complete sequence Length = 63839 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 28047 tctctttctctcacacacaca 28027
>gb|AC112026.4| Rattus norvegicus 19 BAC CH230-105L11 (Children's Hospital Oakland Research Institute) complete sequence Length = 237539 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 237439 tctctttctctcacacacaca 237459
>emb|BX071936.1|CNS09RO4 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC9CF12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 996 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 148 tctctttctctcacacacaca 128
>gb|AC163438.3| Mus musculus chromosome 8, clone RP23-278M23, complete sequence Length = 186102 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 39076 tctctttctctcacacacaca 39096
>gb|AC163018.3| Mus musculus chromosome 15, clone RP24-366J14, complete sequence Length = 175394 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 137322 tctctttctctcacacacaca 137302
>gb|AC131949.1| Homo sapiens BAC clone RP11-240J11 from 4, complete sequence Length = 65210 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 36721 tctctttctctcacacacaca 36701
>emb|BX545848.23| Zebrafish DNA sequence from clone DKEY-8O19 in linkage group 20 Contains the gene for a novel protein (zgc:63746), the gene for a novel protein (zgc:55614), the gene for the 5' end of a novel protein similar to mouse and human cyclin-dependent kinase (CDC2-like) 11 (CDK11), the gene for a novel protein similar to vertebrate mitogen-activated protein kinase kinase kinase 5 (MAP3K5), a novel gene and eleven CpG islands, complete sequence Length = 199986 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 191280 tctctttctctcacacacaca 191300
>emb|BX571762.15| Zebrafish DNA sequence from clone CH211-214G1 in linkage group 15, complete sequence Length = 138829 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 234 tatatctctttctctcacacacaca 258 |||||||||||||| |||||||||| Sbjct: 108062 tatatctctttctcacacacacaca 108086 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 231 ctctatatctctttctctcacacacaca 258 |||| ||||||| ||||||||||||||| Sbjct: 36926 ctctctatctctctctctcacacacaca 36899
>emb|CR388085.9| Zebrafish DNA sequence from clone CH211-232D10, complete sequence Length = 149672 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 125864 tctctttctctcacacacaca 125844
>emb|AL928984.5| Mouse DNA sequence from clone RP24-474O17 on chromosome 11 Contains a CpG island, complete sequence Length = 54243 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 49592 tctctttctctcacacacaca 49612
>emb|BX548059.13| Zebrafish DNA sequence from clone DKEYP-80D11 in linkage group 12, complete sequence Length = 205581 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 136606 tctctttctctcacacacaca 136626
>emb|CR450738.8| Zebrafish DNA sequence from clone DKEY-71L10 in linkage group 8, complete sequence Length = 101924 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 28543 tctctttctctcacacacaca 28563
>gb|AC113347.2| Homo sapiens chromosome 5 clone CTD-2533K21, complete sequence Length = 128152 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 cttacattttcagatgcatgt 293 ||||||||||||||||||||| Sbjct: 16429 cttacattttcagatgcatgt 16409
>emb|BX664605.15| Zebrafish DNA sequence from clone DKEYP-53E4 in linkage group 21, complete sequence Length = 170126 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 160653 tctctttctctcacacacaca 160633
>emb|CR354582.14| Zebrafish DNA sequence from clone CH211-215B24 in linkage group 8, complete sequence Length = 227074 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 54213 tctctttctctcacacacaca 54193
>emb|BX469933.14| Zebrafish DNA sequence from clone CH211-207E19 in linkage group 4 Contains seven novel genes and two CpG islands, complete sequence Length = 216458 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 88906 tctctttctctcacacacaca 88886
>emb|BX321873.12| Zebrafish DNA sequence from clone DKEY-151G22 in linkage group 20 Contains four novel genes and three CpG islands, complete sequence Length = 155649 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 tctctcacacacacagttcct 264 ||||||||||||||||||||| Sbjct: 139712 tctctcacacacacagttcct 139692
>emb|BX957270.8| Zebrafish DNA sequence from clone DKEYP-14F10 in linkage group 4 Contains four CpG islands, complete sequence Length = 143792 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 120047 tctctttctctcacacacaca 120067
>emb|BX901892.22| Zebrafish DNA sequence from clone CH211-218H8 in linkage group 5, complete sequence Length = 137237 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 tctctcacacacacagttcct 264 ||||||||||||||||||||| Sbjct: 105832 tctctcacacacacagttcct 105852
>emb|BX936362.13| Zebrafish DNA sequence from clone DKEY-190J3 in linkage group 22, complete sequence Length = 164857 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 81262 tctctttctctcacacacaca 81282 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacac 257 |||||||||||||||||||| Sbjct: 81402 tctctttctctcacacacac 81421
>emb|CR759762.5| Human DNA sequence from clone DAMC-190N15 on chromosome 6, complete sequence Length = 40072 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 22327 tctctttctctcacacacaca 22307
>emb|CR759913.4| Human DNA sequence from clone DAAP-388C10 on chromosome 6, complete sequence Length = 68030 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 66646 tctctttctctcacacacaca 66626
>gb|AC098613.2| Homo sapiens chromosome 3 clone RP11-24F11, complete sequence Length = 185437 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 97733 tctctttctctcacacacaca 97713
>gb|AC091956.3| Homo sapiens chromosome 5 clone RP11-430F16, complete sequence Length = 209754 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 72493 tctctttctctcacacacaca 72513
>emb|BX571668.20| Zebrafish DNA sequence from clone DKEY-47M8 in linkage group 10, complete sequence Length = 242710 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 127166 tctctttctctcacacacaca 127186
>gb|AC107464.5| Homo sapiens BAC clone RP11-1191J2 from 4, complete sequence Length = 219357 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 164614 tctctttctctcacacacaca 164594
>gb|AF286884.4| Homo sapiens chromosome 8 clone RP11-597D18 map 8p21-p11, complete sequence Length = 207519 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 188752 tctctttctctcacacacaca 188732
>emb|CR293500.7| Zebrafish DNA sequence from clone DKEY-211I20 in linkage group 18, complete sequence Length = 164140 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 83211 tctctttctctcacacacaca 83191
>dbj|BS000625.3| Pan troglodytes chromosome Y clone: PTB-072P24, complete sequence Length = 168181 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 3639 tctctttctctcacacacaca 3619
>dbj|BS000557.1| Pan troglodytes chromosome Y clone:PTB-464M08, complete sequences Length = 120612 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 45849 tctctttctctcacacacaca 45869
>gb|AC106763.2| Homo sapiens chromosome 5 clone RP11-21C10, complete sequence Length = 165902 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 86990 tctctttctctcacacacaca 87010
>emb|BX571955.15| Zebrafish DNA sequence from clone DKEY-27B3 in linkage group 10, complete sequence Length = 272498 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 105357 tctctttctctcacacacaca 105337
>emb|CR749549.1| Homo sapiens mRNA; cDNA DKFZp686B0392 (from clone DKFZp686B0392) Length = 4650 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 900 tctctttctctcacacacaca 920
>emb|BX324194.7| Zebrafish DNA sequence from clone CH211-147A23 in linkage group 5, complete sequence Length = 187691 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 100944 tctctttctctcacacacaca 100964
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 18504644 tctctttctctcacacacaca 18504664
>gb|AC148528.15| Medicago truncatula clone mth2-53h4, complete sequence Length = 141776 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 atatctctttctctcacacacacag 259 |||||||| |||||||||||||||| Sbjct: 140091 atatctctctctctcacacacacag 140115
>gb|AC087485.6| Homo sapiens chromosome 15, clone RP11-570N16, complete sequence Length = 169771 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 68956 tctctttctctcacacacaca 68936
>emb|CR388220.8| Human DNA sequence from clone DADB-123D8 on chromosome 6, complete sequence Length = 131368 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 122438 tctctttctctcacacacaca 122418
>emb|BX640577.17| Zebrafish DNA sequence from clone DKEY-117O14 in linkage group 14, complete sequence Length = 214178 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 35976 tctctttctctcacacacaca 35996
>gb|AC022819.8| Homo sapiens chromosome 15, clone RP11-41I15, complete sequence Length = 193803 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 62855 tctctttctctcacacacaca 62875
>gb|U25171.1|ECU25171 Equus caballus clone UCD-E-CA-46 dinucleotide (CA/GT)n repeat Length = 230 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 70 tctctttctctcacacacaca 50
>gb|AC037479.9| Homo sapiens chromosome 15, clone RP11-616M17, complete sequence Length = 177761 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 57214 tctctttctctcacacacaca 57194
>gb|AC011433.5| Homo sapiens chromosome 5 clone P1_988H11, complete sequence Length = 75454 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 60870 tctctttctctcacacacaca 60850
>gb|AC093789.3| Homo sapiens BAC clone RP11-219G10 from 4, complete sequence Length = 202937 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 63305 tctctttctctcacacacaca 63285
>gb|AC105254.3| Homo sapiens BAC clone RP11-647P12 from 4, complete sequence Length = 176840 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 42708 tctctttctctcacacacaca 42728
>gb|AC087855.6| Homo sapiens chromosome 8, clone RP11-431M3, complete sequence Length = 161256 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 134159 tctctttctctcacacacaca 134139
>gb|AC104664.2| Homo sapiens BAC clone RP11-724H6 from 4, complete sequence Length = 158145 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 234 tatatctctttctctcacacacaca 258 ||||||||| ||||||||||||||| Sbjct: 35680 tatatctctctctctcacacacaca 35704
>gb|AC087671.9| Homo sapiens chromosome 8, clone RP11-597D18, complete sequence Length = 207503 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 18769 tctctttctctcacacacaca 18789
>gb|AC053545.5| Homo sapiens BAC clone RP11-804C24 from 4, complete sequence Length = 188927 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 238 tctctttctctcacacacacagttc 262 ||||| ||||||||||||||||||| Sbjct: 96922 tctctctctctcacacacacagttc 96946
>gb|AF271509.1|AF271509 Salmo salar microsatellite Hae064 sequence Length = 432 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 292 tctctttctctcacacacaca 312
>gb|AC026409.4| Homo sapiens chromosome 5 clone CTC-437M9, complete sequence Length = 163384 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 69973 tctctttctctcacacacaca 69953
>gb|AC182751.1| Gasterosteus aculeatus clone VMRC26-154K14, complete sequence Length = 166500 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 95016 tctctttctctcacacacaca 95036
>emb|BX005461.8| Zebrafish DNA sequence from clone DKEY-192L18 in linkage group 24, complete sequence Length = 162216 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 49652 tctctttctctcacacacaca 49672
>gb|DP000040.1| Otolemur garnettii target 106 genomic scaffold Length = 277620 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 101024 tctctttctctcacacacaca 101004
>emb|BX510647.10| Zebrafish DNA sequence from clone CH211-87N9 in linkage group 5, complete sequence Length = 198695 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 94823 tctctttctctcacacacaca 94843
>emb|BX510648.5| Zebrafish DNA sequence from clone CH211-155O9 in linkage group 5, complete sequence Length = 191453 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 132870 tctctttctctcacacacaca 132850
>gb|AC102011.9| Mus musculus chromosome 5, clone RP24-536B19, complete sequence Length = 142377 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 10180 tctctttctctcacacacaca 10200
>gb|AC021080.4|AC021080 Homo sapiens chromosome 5 clone CTC-203K17, complete sequence Length = 103522 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 93636 tctctttctctcacacacaca 93656
>gb|AC121099.8| Mus musculus chromosome 3, clone RP24-501F21, complete sequence Length = 157318 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 92263 tctctttctctcacacacaca 92243
>gb|AC166003.3| Nomascus leucogenys leucogenys clone CH271-85O19, complete sequence Length = 164417 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 139543 tctctttctctcacacacaca 139563
>gb|AC148669.1| Macaca mulatta Major Histocompatibility Complex BAC MMU063B15, complete sequence Length = 162392 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 95190 tctctttctctcacacacaca 95170
>dbj|AK041550.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630020J05 product:unclassifiable, full insert sequence Length = 942 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 906 tctctttctctcacacacaca 926
>emb|BX682234.9| Zebrafish DNA sequence from clone CH211-193E13, complete sequence Length = 165319 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 39378 tctctttctctcacacacaca 39398
>gb|AC012511.7| Homo sapiens BAC clone RP11-548P2 from 2, complete sequence Length = 153741 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 227 caagctctatatctctttctctcacacacacag 259 |||||||| | ||||| |||||||||||||||| Sbjct: 27242 caagctctctctctctctctctcacacacacag 27274
>gb|AC152159.6| Mus musculus chromosome 15, clone RP23-10O8, complete sequence Length = 217045 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 ctctttctctcacacacacag 259 ||||||||||||||||||||| Sbjct: 73706 ctctttctctcacacacacag 73726
>gb|AC154469.3| Mus musculus BAC clone RP24-158M15 from chromosome 17, complete sequence Length = 151047 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 111627 tctctttctctcacacacaca 111607
>gb|AC079154.5| Homo sapiens BAC clone RP11-314E14 from 2, complete sequence Length = 175387 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 16096 tctctttctctcacacacaca 16116
>gb|AC019206.4| Homo sapiens BAC clone RP11-401N16 from 2, complete sequence Length = 207818 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 65588 tctctttctctcacacacaca 65568
>gb|AC009081.8| Homo sapiens chromosome 16 clone RP11-354I13, complete sequence Length = 166179 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 411 tgaagatctgaatgaaggccagtgt 435 |||||||||||| |||||||||||| Sbjct: 52273 tgaagatctgaaagaaggccagtgt 52249
>gb|AC006376.2|AC006376 Homo sapiens BAC clone RP11-386L3 from Y, complete sequence Length = 172007 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 39566 tctctttctctcacacacaca 39586
>gb|AC135350.6| Homo sapiens chromosome 15, clone RP13-946E15, complete sequence Length = 158316 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 42560 tctctttctctcacacacaca 42580
>gb|AC124589.5| Mus musculus BAC clone RP23-133M13 from chromosome unknown, complete sequence Length = 209265 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 37222 tctctttctctcacacacaca 37242
>gb|AC141484.3| Mus musculus BAC clone RP23-67A20 from chromosome ul, complete sequence Length = 176129 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 61458 tctctttctctcacacacaca 61438
>gb|AC083949.3| Homo sapiens BAC clone CTD-2096A9 from 2, complete sequence Length = 109296 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 1211 tctctttctctcacacacaca 1231
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 1977639 tctctttctctcacacacaca 1977659
>gb|AC156989.3| Mus musculus chromosome 1, clone RP23-379L2, complete sequence Length = 188691 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 60880 tctctttctctcacacacaca 60900
>gb|AC109146.26| Mus musculus chromosome 8, clone RP23-54G23, complete sequence Length = 197868 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 130358 tctctttctctcacacacaca 130378
>emb|BX649616.5| Zebrafish DNA sequence from clone CH211-165K17 in linkage group 18, complete sequence Length = 131062 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 63897 tctctttctctcacacacaca 63877
>emb|BX539310.9| Zebrafish DNA sequence from clone DKEY-19C16 in linkage group 20, complete sequence Length = 238530 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 65244 tctctttctctcacacacaca 65224
>emb|BX296515.11| Pig DNA sequence from clone PigE-121D21, complete sequence Length = 179691 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 146706 tctctttctctcacacacaca 146726
>emb|AL928805.18| Mouse DNA sequence from clone RP23-291H20 on chromosome 2, complete sequence Length = 192688 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 65850 tctctttctctcacacacaca 65870
>dbj|AB013396.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTI20 Length = 79676 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 tctatatctctttctctcacacaca 256 ||||| ||||||||||||||||||| Sbjct: 16051 tctatctctctttctctcacacaca 16027
>gb|AC012099.4|AC012099 Homo sapiens chromosome 14 clone RP11-45G3 containing neurexin III gene, partial cds, complete sequence Length = 157871 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 81107 tctctttctctcacacacaca 81087
>gb|AC122193.5| Mus musculus BAC clone RP23-45G16 from 6, complete sequence Length = 211512 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 36677 tctctttctctcacacacaca 36657
>emb|BX681417.10| Zebrafish DNA sequence from clone DKEY-161L11 in linkage group 2, complete sequence Length = 233760 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 200087 tctctttctctcacacacaca 200067
>emb|CR790375.9| Zebrafish DNA sequence from clone CH211-251O16 in linkage group 4, complete sequence Length = 153499 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 89842 tctctttctctcacacacaca 89822
>emb|CR548627.7| Zebrafish DNA sequence from clone DKEYP-24A7 in linkage group 19, complete sequence Length = 146348 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 98357 tctctttctctcacacacaca 98337
>emb|BX248090.11| Zebrafish DNA sequence from clone DKEY-156K12 in linkage group 20, complete sequence Length = 212314 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 165753 tctctttctctcacacacaca 165733
>emb|BX321888.21| Zebrafish DNA sequence from clone DKEYP-47D4 in linkage group 20, complete sequence Length = 176463 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 39758 tctctttctctcacacacaca 39778
>emb|BX247899.17| Zebrafish DNA sequence from clone CH211-229B6 in linkage group 19, complete sequence Length = 150160 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 70151 tctctttctctcacacacaca 70171
>emb|AL928866.7| Zebrafish DNA sequence from clone DKEY-11E23 in linkage group 20, complete sequence Length = 249759 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 186590 tctctttctctcacacacaca 186610
>gb|AC113288.7| Mus musculus chromosome 5, clone RP23-414I12, complete sequence Length = 185599 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 174070 tctctttctctcacacacaca 174090
>gb|AC006602.1|AC006602 Homo sapiens Chromosome 15q11-q13 PAC clone pDJ476i9 from the Prader-Willi/Angelman Syndrome region, complete sequence Length = 93610 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 6621 tctctttctctcacacacaca 6641
>emb|AL355835.3|CNS05TCP Human chromosome 14 DNA sequence BAC R-196N22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 172374 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 234 tatatctctttctctcacacacaca 258 ||||||||| ||||||||||||||| Sbjct: 103361 tatatctctctctctcacacacaca 103385
>emb|AL137786.3|CNS01DWO Human chromosome 14 DNA sequence BAC R-433J8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 197689 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 50938 tctctttctctcacacacaca 50958
>emb|AL161751.3|CNS01RHG Human chromosome 14 DNA sequence BAC R-96D24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 184692 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 234 tatatctctttctctcacacacaca 258 ||||||||| ||||||||||||||| Sbjct: 139502 tatatctctctctctcacacacaca 139526
>gb|AC118684.9| Mus musculus chromosome 17, clone RP23-414B17, complete sequence Length = 202561 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 73103 tctctttctctcacacacaca 73123
>emb|BX001004.11| Zebrafish DNA sequence from clone DKEY-30N2 in linkage group 5, complete sequence Length = 82272 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 38992 tctctttctctcacacacaca 38972
>emb|BX294383.7| Zebrafish DNA sequence from clone DKEYP-35E5 in linkage group 4, complete sequence Length = 184004 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 34457 tctctttctctcacacacaca 34437
>emb|AL772339.5| Zebrafish DNA sequence from clone CH211-139K23, complete sequence Length = 166809 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 163610 tctctttctctcacacacaca 163630
>gb|AC119248.8| Mus musculus chromosome 8, clone RP24-273H15, complete sequence Length = 183813 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 169795 tctctttctctcacacacaca 169815
>gb|AC154313.2| Mus musculus BAC clone RP23-354M21 from chromosome 12, complete sequence Length = 220909 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 37533 tctctttctctcacacacaca 37513
>gb|AC131766.4| Mus musculus BAC clone RP24-240O7 from 6, complete sequence Length = 152512 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 234 tatatctctttctctcacacacaca 258 ||||||||| ||||||||||||||| Sbjct: 12243 tatatctctctctctcacacacaca 12219
>gb|AC130211.3| Mus musculus BAC clone RP24-261D2 from 1, complete sequence Length = 182051 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 134270 tctctttctctcacacacaca 134250
>emb|CT010429.11| Mouse DNA sequence from clone RP23-306H20 on chromosome 17, complete sequence Length = 191390 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 95157 tctctttctctcacacacaca 95177
>gb|AC140110.2| Mus musculus BAC clone RP23-29H6 from 6, complete sequence Length = 214089 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 147306 tctctttctctcacacacaca 147286
>gb|AC126045.3| Mus musculus BAC clone RP23-71I22 from 12, complete sequence Length = 224725 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 205476 tctctttctctcacacacaca 205496
>gb|AC147637.3| Mus musculus BAC clone RP23-205M20 from 9, complete sequence Length = 211684 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 955 tctctttctctcacacacaca 975
>gb|AC126931.4| Mus musculus BAC clone RP23-389M9 from 9, complete sequence Length = 189423 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 11496 tctctttctctcacacacaca 11476
>gb|AC127360.3| Mus musculus BAC clone RP23-125F9 from 15, complete sequence Length = 192315 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 26050 tctctttctctcacacacaca 26070
>emb|CR405701.20| Zebrafish DNA sequence from clone CH211-45M20 in linkage group 5, complete sequence Length = 125284 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 102974 tctctttctctcacacacaca 102954
>ref|NG_001332.1| Homo sapiens T cell receptor alpha delta locus (TCRA/TCRD) on chromosome 14 Length = 1071646 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 724658 tctctttctctcacacacaca 724678
>emb|AL935318.6| Zebrafish DNA sequence from clone CH211-251L7 in linkage group 18, complete sequence Length = 176719 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 78896 tctctttctctcacacacaca 78876
>emb|AL928626.10| Mouse DNA sequence from clone RP23-365O18 on chromosome 2, complete sequence Length = 133812 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 34409 tctctttctctcacacacaca 34389
>gb|U95626.1|HSU95626 Homo sapiens ccr2b (ccr2), ccr2a (ccr2), ccr5 (ccr5) and ccr6 (ccr6) genes, complete cds, and lactoferrin (lactoferrin) gene, partial cds, complete sequence Length = 143068 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 129794 tctctttctctcacacacaca 129774
>gb|AC138293.11| Mus musculus chromosome 18, clone RP23-33P24, complete sequence Length = 235495 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 158408 tctctttctctcacacacaca 158388
>emb|AL808121.7| Zebrafish DNA sequence from clone CH211-251B22, complete sequence Length = 154450 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 38215 tctctttctctcacacacaca 38235
>emb|AL672103.10| Mouse DNA sequence from clone RP23-375G11 on chromosome X, complete sequence Length = 196568 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 42682 tctctttctctcacacacaca 42702
>emb|AL805923.6| Mouse DNA sequence from clone RP23-65B16 on chromosome 4, complete sequence Length = 182774 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 81071 tctctttctctcacacacaca 81091
>gb|AC117789.17| Mus musculus chromosome 1, clone RP24-548D18, complete sequence Length = 180733 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 15107 tctctttctctcacacacaca 15127
>dbj|AB023056.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region, clone:544A6, complete sequence Length = 162227 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 106052 tctctttctctcacacacaca 106072
>emb|AL772406.4| Mouse DNA sequence from clone RP23-321K16 on chromosome 4, complete sequence Length = 151744 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacaca 258 ||||||||||||||||||||| Sbjct: 133457 tctctttctctcacacacaca 133437
>gb|AY842481.1| Homo sapiens growth associated protein 43 (GAP43) gene, complete cds Length = 100848 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 ctctttctctcacacacaca 258 |||||||||||||||||||| Sbjct: 28842 ctctttctctcacacacaca 28861
>gb|BC061957.1| Danio rerio transaldolase 1, mRNA (cDNA clone MGC:66054 IMAGE:6795131), complete cds Length = 3348 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 atatctctttctctcacacacaca 258 |||||||| ||||||||||||||| Sbjct: 1281 atatctctctctctcacacacaca 1258
>gb|AC102414.8| Mus musculus chromosome 15, clone RP24-474D5, complete sequence Length = 159739 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccttaaccccacttacattt 281 |||||||||||||||||||| Sbjct: 29019 ccttaaccccacttacattt 29000
>gb|AC153580.19| Mus musculus 6 BAC RP23-389F23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 180936 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 231 ctctatatctctttctctcacacacaca 258 |||||| ||||| ||||||||||||||| Sbjct: 147577 ctctatctctctctctctcacacacaca 147604
>ref|XM_483242.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1439 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 ctctttctctcacacacaca 258 |||||||||||||||||||| Sbjct: 1406 ctctttctctcacacacaca 1387
>ref|XM_507592.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1134_H03.31 mRNA Length = 1555 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 ctctttctctcacacacaca 258 |||||||||||||||||||| Sbjct: 1400 ctctttctctcacacacaca 1381
>ref|XM_507286.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1134_H03.31 mRNA Length = 1562 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 ctctttctctcacacacaca 258 |||||||||||||||||||| Sbjct: 1405 ctctttctctcacacacaca 1386
>gb|AY596826.2| Xenopus laevis urocortin 3 precursor, mRNA, complete cds Length = 880 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 acagatacatttcccagcca 213 |||||||||||||||||||| Sbjct: 310 acagatacatttcccagcca 329
>gb|AC120871.12| Mus musculus chromosome 16, clone RP23-121E8, complete sequence Length = 218995 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacac 257 |||||||||||||||||||| Sbjct: 73518 tctctttctctcacacacac 73499
>gb|AC106842.7| Mus musculus chromosome 7, clone RP24-165F13, complete sequence Length = 140252 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 atatctctttctctcacacacaca 258 |||||||| ||||||||||||||| Sbjct: 95271 atatctctctctctcacacacaca 95294
>gb|U92288.1|HHU92288 Human herpesvirus 6 serotype B putative major immediate-early genes Length = 30752 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 231 ctctatatctctttctctcacacacaca 258 |||| |||||||||||||| |||||||| Sbjct: 21425 ctctctatctctttctctctcacacaca 21398
>gb|AF251821.1|F251818S04 Homo sapiens vitronectin receptor alpha polypeptide (ITGAV) gene, exon 4 Length = 323 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 atatctctttctctcacacacaca 258 |||||||| ||||||||||||||| Sbjct: 317 atatctctctctctcacacacaca 294
>gb|AY488608.1| Zacco pachycephalus microsatellite ZT41 sequences Length = 431 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 atatctctttctctcacacacaca 258 |||||||| ||||||||||||||| Sbjct: 212 atatctctctctctcacacacaca 235
>gb|AC100734.4| Mus musculus chromosome 15, clone RP24-316L11, complete sequence Length = 182088 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 ctctttctctcacacacaca 258 |||||||||||||||||||| Sbjct: 115563 ctctttctctcacacacaca 115582
>gb|AC157574.6| Mus musculus BAC clone RP23-1G17 from chromosome 8, complete sequence Length = 216443 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 231 ctctatatctctttctctcacacacaca 258 |||| ||||||| ||||||||||||||| Sbjct: 215443 ctctctatctctctctctcacacacaca 215416
>gb|AC094571.8| Rattus norvegicus 20 BAC CH230-4L21 (Children's Hospital Oakland Research Institute) complete sequence Length = 230137 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 atctgaatgaaggccagtgt 435 |||||||||||||||||||| Sbjct: 6439 atctgaatgaaggccagtgt 6420
>gb|AC149763.5| Bos taurus BAC CH240-53K11 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 160327 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 atatctctttctctcacacacaca 258 ||||||||||| |||||||||||| Sbjct: 122598 atatctctttccctcacacacaca 122621
>gb|AC146075.3| Pan troglodytes BAC clone RP43-15H6 from 7, complete sequence Length = 174752 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 tctctttctctcacacacac 257 |||||||||||||||||||| Sbjct: 40235 tctctttctctcacacacac 40216
>gb|BC068191.1| Danio rerio transaldolase 1, mRNA (cDNA clone MGC:76974 IMAGE:6525548), complete cds Length = 1770 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 atatctctttctctcacacacaca 258 |||||||| ||||||||||||||| Sbjct: 1572 atatctctctctctcacacacaca 1549
>gb|AC100708.10| Mus musculus chromosome 10, clone RP23-169I18, complete sequence Length = 196776 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 taatgaaaacatgcagtataacac 120 |||||||||||||||| ||||||| Sbjct: 69347 taatgaaaacatgcaggataacac 69370 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,460,212 Number of Sequences: 3902068 Number of extensions: 5460212 Number of successful extensions: 153788 Number of sequences better than 10.0: 414 Number of HSP's better than 10.0 without gapping: 417 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 151799 Number of HSP's gapped (non-prelim): 1979 length of query: 501 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 479 effective length of database: 17,147,199,772 effective search space: 8213508690788 effective search space used: 8213508690788 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)