ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart28h12 |
|---|---|
| Clone Library Name | barley_pub |
>C74A1_ORYSA (Q7Y0C8) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase 1) (Hydroperoxide dehydrase 1) Length = 512 Score = 147 bits (371), Expect = 1e-35 Identities = 69/83 (83%), Positives = 78/83 (93%) Frame = -3 Query: 448 YVPDRFMGEDGERLLRYVVWSNGPESATPTLQDKQCAGKDFVVLIARLLVAEIFLRYDSF 269 YVPDRF+GEDG RLLR+VVWSNGPE+A PTL DKQCAGKDFVVL+ARLL+ E+FLRYDSF Sbjct: 430 YVPDRFLGEDGARLLRHVVWSNGPETAAPTLHDKQCAGKDFVVLVARLLLVELFLRYDSF 489 Query: 268 DVQVGSSPLGSSVTITSLKKATF 200 DV+VG+S LGSSVT+TSLKKATF Sbjct: 490 DVEVGTSTLGSSVTVTSLKKATF 512
>CP74A_ARATH (Q96242) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 518 Score = 131 bits (330), Expect = 7e-31 Identities = 59/83 (71%), Positives = 76/83 (91%) Frame = -3 Query: 448 YVPDRFMGEDGERLLRYVVWSNGPESATPTLQDKQCAGKDFVVLIARLLVAEIFLRYDSF 269 +VP+RF+GE+GE+LLR+V+WSNGPE+ TPT+ +KQCAGKDFVVL+ARL V EIF RYDSF Sbjct: 436 FVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSF 495 Query: 268 DVQVGSSPLGSSVTITSLKKATF 200 D++VG+SPLGSSV +SL+KA+F Sbjct: 496 DIEVGTSPLGSSVNFSSLRKASF 518
>C74A2_PARAR (Q40778) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase)| (Rubber particle protein) (RPP) Length = 473 Score = 118 bits (296), Expect = 6e-27 Identities = 54/82 (65%), Positives = 72/82 (87%) Frame = -3 Query: 448 YVPDRFMGEDGERLLRYVVWSNGPESATPTLQDKQCAGKDFVVLIARLLVAEIFLRYDSF 269 +VPDRF+G DGE LL+YV WSNGPE+ +PT+++KQCAGKDFVVLI RL V E+F RYDSF Sbjct: 392 FVPDRFVG-DGEALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSF 450 Query: 268 DVQVGSSPLGSSVTITSLKKAT 203 ++++G SPLG++VT+T LK+A+ Sbjct: 451 EIELGESPLGAAVTLTFLKRAS 472
>CP74_LINUS (P48417) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 536 Score = 117 bits (293), Expect = 1e-26 Identities = 53/83 (63%), Positives = 72/83 (86%) Frame = -3 Query: 448 YVPDRFMGEDGERLLRYVVWSNGPESATPTLQDKQCAGKDFVVLIARLLVAEIFLRYDSF 269 +V DRF+GE G +L+ YV+WSNGPE+ TP++ +KQCAGKDFVV+ ARL V E+F RYDSF Sbjct: 455 FVADRFVGE-GVKLMEYVMWSNGPETETPSVANKQCAGKDFVVMAARLFVVELFKRYDSF 513 Query: 268 DVQVGSSPLGSSVTITSLKKATF 200 D++VG+S LG+S+T+TSLK++TF Sbjct: 514 DIEVGTSSLGASITLTSLKRSTF 536
>C74A2_ORYSA (Q7XYS3) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase| 2) (Hydroperoxide dehydrase 2) Length = 478 Score = 88.6 bits (218), Expect = 7e-18 Identities = 41/82 (50%), Positives = 58/82 (70%) Frame = -3 Query: 448 YVPDRFMGEDGERLLRYVVWSNGPESATPTLQDKQCAGKDFVVLIARLLVAEIFLRYDSF 269 +V DRF+GE+G +LL+YV WSNG E+ P++ +KQC GK+ VVL+ RLL+ E+FLRYD+F Sbjct: 394 FVGDRFVGEEGRKLLQYVYWSNGRETENPSVDNKQCPGKNLVVLVGRLLLVELFLRYDTF 453 Query: 268 DVQVGSSPLGSSVTITSLKKAT 203 + G V IT + KA+ Sbjct: 454 TAEA-----GKKVVITGVTKAS 470
>C74A4_ORYSA (Q6Z6K9) Cytochrome P450 74A4 (EC 4.2.1.92) (Allene oxide synthase| 4) (Hydroperoxide dehydrase 4) Length = 510 Score = 85.9 bits (211), Expect = 4e-17 Identities = 44/84 (52%), Positives = 55/84 (65%), Gaps = 3/84 (3%) Frame = -3 Query: 448 YVPDRFM---GEDGERLLRYVVWSNGPESATPTLQDKQCAGKDFVVLIARLLVAEIFLRY 278 +VPDRF+ G LL +VVWSNGPE+ TP+ +KQC GKD VV + RL+VA +F RY Sbjct: 416 FVPDRFVSGAGSAARPLLEHVVWSNGPETGTPSEGNKQCPGKDMVVAVGRLMVAGLFRRY 475 Query: 277 DSFDVQVGSSPLGSSVTITSLKKA 206 D+F V PL VT TSL +A Sbjct: 476 DTFAADVEELPLEPVVTFTSLTRA 499
>C74A3_ORYSA (Q6Z6L1) Cytochrome P450 74A3 (EC 4.2.1.92) (Allene oxide synthase| 3) (Hydroperoxide dehydrase 3) Length = 500 Score = 84.3 bits (207), Expect = 1e-16 Identities = 44/85 (51%), Positives = 59/85 (69%), Gaps = 3/85 (3%) Frame = -3 Query: 448 YVPDRFM--GEDGER-LLRYVVWSNGPESATPTLQDKQCAGKDFVVLIARLLVAEIFLRY 278 +V DRF+ G G+R LL +VVWSNGPE+ P+ +KQC GKD VV + RL+VAE+F RY Sbjct: 414 FVADRFVAGGAAGDRPLLEHVVWSNGPETRAPSEGNKQCPGKDMVVAVGRLMVAELFRRY 473 Query: 277 DSFDVQVGSSPLGSSVTITSLKKAT 203 D+F V +P+ VT TSL +A+ Sbjct: 474 DTFAADVVEAPVEPVVTFTSLTRAS 498
>FUT3_HUMAN (P21217) Galactoside 3(4)-L-fucosyltransferase (EC 2.4.1.65) (Blood| group Lewis alpha-4-fucosyltransferase) (Lewis FT) (Fucosyltransferase 3) (FUCT-III) Length = 361 Score = 30.0 bits (66), Expect = 2.8 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 4/52 (7%) Frame = -3 Query: 319 LIARLLVAEIFLRY--DSFDVQVGS--SPLGSSVTITSLKKATF*VLFWPWP 176 L+ +LLVA F Y S D GS +P GSS T+ + T +L W WP Sbjct: 20 LLFQLLVAVCFFSYLRVSRDDATGSPRAPSGSSRQDTTPTRPTLLILLWTWP 71
>NRP1_RAT (Q9QWJ9) Neuropilin-1 precursor (Vascular endothelial cell growth| factor 165 receptor) Length = 922 Score = 29.3 bits (64), Expect = 4.7 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 11/67 (16%) Frame = -3 Query: 406 LRYVVWSNGPESA-----------TPTLQDKQCAGKDFVVLIARLLVAEIFLRYDSFDVQ 260 +RY ++ GPE + +P +K + +I ++EI L ++SFD++ Sbjct: 136 IRYEIFKRGPECSQNYTAPTGVIKSPGFPEKYPNSLECTYIIFAPKMSEIILEFESFDLE 195 Query: 259 VGSSPLG 239 S+P G Sbjct: 196 QDSNPPG 202
>C86A1_ARATH (P48422) Cytochrome P450 86A1 (EC 1.14.-.-) (CYPLXXXVI)| (P450-dependent fatty acid omega-hydroxylase) Length = 513 Score = 28.9 bits (63), Expect = 6.2 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 6/66 (9%) Frame = -3 Query: 442 PDRFMGEDGERL------LRYVVWSNGPESATPTLQDKQCAGKDFVVLIARLLVAEIFLR 281 P+R++ DGER ++V ++ GP + C GKD + + + + LR Sbjct: 426 PERWLTADGERFETPKDGYKFVAFNAGPRT---------CLGKDLAYNQMKSVASAVLLR 476 Query: 280 YDSFDV 263 Y F V Sbjct: 477 YRVFPV 482
>HAK7_ORYSA (Q8H3P9) Potassium transporter 7 (OsHAK7)| Length = 811 Score = 28.9 bits (63), Expect = 6.2 Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 6/107 (5%) Frame = +3 Query: 33 QEKKFLLHKSSNTPCKSITCIV*YWYRSRRADEKN*V-HVAMSLAATAVGHGQKRTQKVA 209 +++++L+ + + CIV Y Y+ + D++N H+ MS+A ++ + Sbjct: 602 EDERYLIGRIGPREYRMYRCIVRYGYKDVQKDDENFENHLVMSIAKFIQMEAEEAASSGS 661 Query: 210 FLSE-----VMVTEDPSGEDPTCTSKES*RRKISATRRRAMSTTKSL 335 + S V+ TED +G + S TR T +SL Sbjct: 662 YESSEGRMAVIHTEDTTGTGLVMRDSNNEASGTSLTRSSRSETLRSL 708
>Y1632_PYRAE (Q8ZWT2) UPF0201 protein PAE1632| Length = 143 Score = 28.9 bits (63), Expect = 6.2 Identities = 17/56 (30%), Positives = 26/56 (46%) Frame = -3 Query: 406 LRYVVWSNGPESATPTLQDKQCAGKDFVVLIARLLVAEIFLRYDSFDVQVGSSPLG 239 LR +W G + A ++ + G+D VV A ++ SF + G SPLG Sbjct: 55 LRSAIWRQGIQDAARSVISRGIVGEDTVVFSVNKQAA--YVGVVSFVTEAGESPLG 108
>NRP1_HUMAN (O14786) Neuropilin-1 precursor (Vascular endothelial cell growth| factor 165 receptor) (CD304 antigen) Length = 923 Score = 28.9 bits (63), Expect = 6.2 Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 11/67 (16%) Frame = -3 Query: 406 LRYVVWSNGPESA-----------TPTLQDKQCAGKDFVVLIARLLVAEIFLRYDSFDVQ 260 +RY ++ GPE + +P +K + ++ ++EI L ++SFD++ Sbjct: 136 IRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLE 195 Query: 259 VGSSPLG 239 S+P G Sbjct: 196 PDSNPPG 202
>RAD5_USTMA (Q4PGG5) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1387 Score = 28.5 bits (62), Expect = 8.1 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +3 Query: 216 SEVMVTEDPSGEDPTCTSKES*RRKISATRRRAMSTTKSLPAHC 347 SE + P +D ++ + R K S + +++TTKS P HC Sbjct: 168 SETVYKRSPPSDDVQASNGPAKRPKKSWSTPASVATTKSAPRHC 211 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,484,449 Number of Sequences: 219361 Number of extensions: 956060 Number of successful extensions: 2346 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2302 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2346 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
