ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart28h01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|BX914203.24| Zebrafish DNA sequence from clone CH211-22E19 i... 44 0.23
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.23
3dbj|AP002744.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.23
4dbj|AP002839.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.23
5emb|AL355834.4|CNS05TCN Human chromosome 14 DNA sequence BAC R-9... 44 0.23
6emb|Z81483.2|CEC43D7 Caenorhabditis elegans Cosmid C43D7, comple... 44 0.23
7emb|AL161804.4|CNS01RHL Human chromosome 14 DNA sequence BAC R-4... 44 0.23
8gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome 42 0.91
9gb|AC165161.3| Mus musculus BAC clone RP23-187K9 from chromosome... 42 0.91
10ref|NM_192906.1| Oryza sativa (japonica cultivar-group), predic... 42 0.91
11ref|NM_192899.1| Oryza sativa (japonica cultivar-group), predic... 42 0.91
12gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome 42 0.91
13gb|AC107312.9| Homo sapiens 3 BAC RP11-574E7 (Roswell Park Cance... 42 0.91
14ref|XM_731869.1| Plasmodium chabaudi chabaudi hypothetical prote... 42 0.91
15ref|XM_662238.1| Cryptosporidium hominis TU502 hypothetical prot... 42 0.91
16gb|AC124969.12| Medicago truncatula clone mth2-15o15, complete s... 42 0.91
17emb|AL596214.6| Human DNA sequence from clone RP11-27A24 on chro... 42 0.91
18emb|CR925678.1| Ehrlichia ruminantium str. Welgevonden, complete... 42 0.91
19emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome 42 0.91
20emb|CR767821.1| Ehrlichia ruminantium strain Welgevonden, comple... 42 0.91
21gb|AC162038.6| Mus musculus 6 BAC RP24-576J4 (Roswell Park Cance... 42 0.91
22emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207... 42 0.91
23gb|AC113352.2| Homo sapiens chromosome 5 clone CTD-2613O8, compl... 42 0.91
24dbj|AB237165.1| Oryza sativa (japonica cultivar-group) CYP72A18 ... 42 0.91
25gb|AC008618.7| Homo sapiens chromosome 5 clone CTB-146E17, compl... 42 0.91
26gb|AC008565.6|AC008565 Homo sapiens chromosome 5 clone CTC-538F1... 42 0.91
27gb|AC117080.2| Dictyostelium discoideum chromosome 2 map complem... 42 0.91
28dbj|AK105255.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.91
29dbj|AK101545.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.91
30gb|AC155330.3| Mus musculus 6 BAC RP24-146L23 (Roswell Park Canc... 42 0.91
31emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 0.91
32gb|AC118614.12| Mus musculus chromosome 18, clone RP23-477B20, c... 42 0.91
33dbj|AB047400.1| Oryza sativa (japonica cultivar-group) Rice2 mRN... 42 0.91
34ref|XM_638180.1| Dictyostelium discoideum hypothetical protein (... 40 3.6
35gb|AC145366.2| Oryza sativa (japonica cultivar-group) chromosome... 40 3.6
36gb|AC151060.4| Bos taurus BAC CH240-293H4 (Children's Hospital ... 40 3.6
37gb|AC011249.7| Drosophila melanogaster clone BACR37F23, complete... 40 3.6
38gb|AC110102.6| Rattus norvegicus 4 BAC CH230-209C7 (Children's H... 40 3.6
39gb|AC146485.2| Xenopus tropicalis clone CH216-8M11, complete seq... 40 3.6
40gb|AC098390.6| Rattus norvegicus 1 BAC CH230-1M24 (Children's Ho... 40 3.6
41gb|AC116979.3| Dictyostelium discoideum chromosome 2 map 6445720... 40 3.6
42gb|AC111096.15| Mus musculus chromosome 3, clone RP23-174B18, co... 40 3.6
43gb|AC144636.4| Artibeus jamaicensis clone 1A13, complete sequence 40 3.6
44gb|AC142294.1| Pan troglodytes BAC clone RP43-73M4 from 7, compl... 40 3.6
45emb|AL512410.14| Human DNA sequence from clone RP11-100E6 on chr... 40 3.6
46emb|AL158070.11| Human DNA sequence from clone RP11-235C23 on ch... 40 3.6
47emb|CR536604.6| Zebrafish DNA sequence from clone DKEY-57A22 in ... 40 3.6
48emb|CR848759.4| Zebrafish DNA sequence from clone CH211-229D2 in... 40 3.6
49emb|CR548612.1| Paramecium tetraurelia macronuclear largest chro... 40 3.6
50emb|AL035476.7|PFMAL4P3 Plasmodium falciparum MAL4P3 40 3.6
51gb|AC121515.3| Rattus norvegicus strain Brown Norway clone RP31-... 40 3.6
52emb|CR354424.7| Zebrafish DNA sequence from clone CH211-125L9 in... 40 3.6
53gb|AF481922.1| Dictyostelium discoideum cAMP/cGMP-stimulated cAM... 40 3.6
54gb|AC118470.2| Homo sapiens chromosome 1 clone RP11-634B7, compl... 40 3.6
55gb|DP000001.1| Artibeus jamaicensis target 1 genomic scaffold 40 3.6
56gb|AY047364.1| Dictyostelium discoideum cAMP phosphodiesterase (... 40 3.6
57gb|AC092230.1|AC092230 Drosophila melanogaster, chromosome 2L, r... 40 3.6
58gb|AC017087.5|AC017087 Homo sapiens BAC clone RP11-495H13 from 4... 40 3.6
59dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
60gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold 40 3.6
61gb|AC092682.2| Homo sapiens BAC clone RP11-734C21 from 2, comple... 40 3.6
62gb|AC145893.2| Pan troglodytes BAC clone RP43-8C18 from chromoso... 40 3.6
63gb|AC117457.11| Homo sapiens 3 BAC RP11-385J1 (Roswell Park Canc... 40 3.6
64gb|AC139661.5| Homo sapiens 3 BAC RP11-102O12 (Roswell Park Canc... 40 3.6
65dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome 40 3.6
66emb|BX255896.4| Zebrafish DNA sequence from clone CH211-249O11 i... 40 3.6
67gb|AE003614.4| Drosophila melanogaster chromosome 2L, section 23... 40 3.6
68gb|AY613856.1| Oikopleura dioica clone BACOIKO008 5xo15, complet... 40 3.6
69emb|AL935293.11| Zebrafish DNA sequence from clone CH211-251D10 ... 40 3.6
70dbj|AB084070.1| Mycoplasma penetrans gene for lipoprotein P42, c... 40 3.6
71emb|CR955004.2| Medicago truncatula chromosome 5 clone mte1-9e19... 40 3.6
72gb|AF033210.1|AF033210 Pneumocystis carinii f. sp. hominis clone... 40 3.6
73gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 3.6
74emb|AL512310.4|CNS07EF1 Human chromosome 14 DNA sequence BAC R-5... 40 3.6
75gb|AC147971.2| Gallus gallus BAC clone CH261-79K6 from chromosom... 40 3.6
76emb|AL929530.9| Zebrafish DNA sequence from clone CH211-190H2, c... 40 3.6
77dbj|AB241456.1| Lotus japonicus TINod gene for transcription ini... 40 3.6
78ref|NM_006731.1| Homo sapiens Fukuyama type congenital muscular ... 40 3.6
79dbj|AB008226.1| Homo sapiens FCMD mRNA for fukutin, complete cds 40 3.6
80dbj|AB038490.1| Homo sapiens gene for fukutin, complete cds 40 3.6 
>emb|BX914203.24| Zebrafish DNA sequence from clone CH211-22E19 in linkage group 11,
              complete sequence
          Length = 179563

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 55     caataataaacatatatttttctact 80
              |||||||| |||||||||||||||||
Sbjct: 110157 caataatatacatatatttttctact 110182
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                              
Query: 213      atcatattgccctgagcttaatttgtgcaccatgcatggggcgcaa 258
                ||||||| || || |||||||| |||||||||||| | ||||||||
Sbjct: 25068817 atcatatagctctaagcttaatctgtgcaccatgcgtagggcgcaa 25068772



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 227      agcttaatttgtgcaccatgc 247
                |||||||||||||||||||||
Sbjct: 25042035 agcttaatttgtgcaccatgc 25042055
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>dbj|AP002744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0006C01
          Length = 153865

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                            
Query: 213    atcatattgccctgagcttaatttgtgcaccatgcatggggcgcaa 258
              ||||||| || || |||||||| |||||||||||| | ||||||||
Sbjct: 141340 atcatatagctctaagcttaatctgtgcaccatgcgtagggcgcaa 141295



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 227    agcttaatttgtgcaccatgc 247
              |||||||||||||||||||||
Sbjct: 114558 agcttaatttgtgcaccatgc 114578
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>dbj|AP002839.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0688A04
          Length = 143969

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                           
Query: 213   atcatattgccctgagcttaatttgtgcaccatgcatggggcgcaa 258
             ||||||| || || |||||||| |||||||||||| | ||||||||
Sbjct: 68425 atcatatagctctaagcttaatctgtgcaccatgcgtagggcgcaa 68380



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 227   agcttaatttgtgcaccatgc 247
             |||||||||||||||||||||
Sbjct: 41643 agcttaatttgtgcaccatgc 41663
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>emb|AL355834.4|CNS05TCN Human chromosome 14 DNA sequence BAC R-932A10 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 222275

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 57     ataataaacatatatttttcta 78
              ||||||||||||||||||||||
Sbjct: 222131 ataataaacatatatttttcta 222152
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>emb|Z81483.2|CEC43D7 Caenorhabditis elegans Cosmid C43D7, complete sequence
          Length = 34981

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 108  actttattccaaacatttgtat 129
            ||||||||||||||||||||||
Sbjct: 4897 actttattccaaacatttgtat 4918
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>emb|AL161804.4|CNS01RHL Human chromosome 14 DNA sequence BAC R-409I10 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 151853

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 57    ataataaacatatatttttcta 78
             ||||||||||||||||||||||
Sbjct: 98205 ataataaacatatatttttcta 98184
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>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 113     attccaaacatttgtatgtat 133
               |||||||||||||||||||||
Sbjct: 2814826 attccaaacatttgtatgtat 2814846
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>gb|AC165161.3| Mus musculus BAC clone RP23-187K9 from chromosome 18, complete sequence
          Length = 191720

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 48    ctaaaatcaataataaacata 68
             |||||||||||||||||||||
Sbjct: 35722 ctaaaatcaataataaacata 35702
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>ref|NM_192906.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1599

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 214  tcatattgccctgagcttaatttgtgcaccatgcatggggcgcaa 258
            |||||| || || |||||||| |||||||||||| | ||||||||
Sbjct: 1599 tcatatagctctaagcttaatctgtgcaccatgcgtagggcgcaa 1555
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>ref|NM_192899.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1572

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 227  agcttaatttgtgcaccatgc 247
            |||||||||||||||||||||
Sbjct: 1559 agcttaatttgtgcaccatgc 1539
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>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 113     attccaaacatttgtatgtat 133
               |||||||||||||||||||||
Sbjct: 2815687 attccaaacatttgtatgtat 2815707
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>gb|AC107312.9| Homo sapiens 3 BAC RP11-574E7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 138925

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 128   atgtatgaaagcatattacat 148
             |||||||||||||||||||||
Sbjct: 23739 atgtatgaaagcatattacat 23759
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>ref|XM_731869.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000565.01.0)
           partial mRNA
          Length = 684

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 55  caataataaacatatattttt 75
           |||||||||||||||||||||
Sbjct: 354 caataataaacatatattttt 334
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>ref|XM_662238.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.80475)
           partial mRNA
          Length = 423

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 44  aaaactaaaatcaataataaa 64
           |||||||||||||||||||||
Sbjct: 379 aaaactaaaatcaataataaa 399
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>gb|AC124969.12| Medicago truncatula clone mth2-15o15, complete sequence
          Length = 134863

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 56    aataataaacatatatttttc 76
             |||||||||||||||||||||
Sbjct: 20654 aataataaacatatatttttc 20634
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>emb|AL596214.6| Human DNA sequence from clone RP11-27A24 on chromosome 1, complete
             sequence
          Length = 74625

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 49    taaaatcaataataaacatatattt 73
             |||||| ||||||||||||||||||
Sbjct: 19335 taaaataaataataaacatatattt 19359
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>emb|CR925678.1| Ehrlichia ruminantium str. Welgevonden, complete genome
          Length = 1512977

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 50     aaaatcaataataaacatata 70
              |||||||||||||||||||||
Sbjct: 518301 aaaatcaataataaacatata 518281
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>emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome
          Length = 1499920

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 50     aaaatcaataataaacatata 70
              |||||||||||||||||||||
Sbjct: 514853 aaaatcaataataaacatata 514833
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>emb|CR767821.1| Ehrlichia ruminantium strain Welgevonden, complete genome
          Length = 1516355

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 50     aaaatcaataataaacatata 70
              |||||||||||||||||||||
Sbjct: 538443 aaaatcaataataaacatata 538423
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>gb|AC162038.6| Mus musculus 6 BAC RP24-576J4 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 175787

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 153    aaccactaaacactatgtaat 173
              |||||||||||||||||||||
Sbjct: 145800 aaccactaaacactatgtaat 145780
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>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome
          Length = 124321

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 56    aataataaacatatatttttctact 80
             |||||| ||||||||||||||||||
Sbjct: 81180 aataatcaacatatatttttctact 81156
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>gb|AC113352.2| Homo sapiens chromosome 5 clone CTD-2613O8, complete sequence
          Length = 133668

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 54    tcaataataaacatatatttt 74
             |||||||||||||||||||||
Sbjct: 13797 tcaataataaacatatatttt 13777
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>dbj|AB237165.1| Oryza sativa (japonica cultivar-group) CYP72A18 mRNA for cytochrome
            P450 monooxygenase, complete cds
          Length = 1572

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 227  agcttaatttgtgcaccatgc 247
            |||||||||||||||||||||
Sbjct: 1559 agcttaatttgtgcaccatgc 1539
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>gb|AC008618.7| Homo sapiens chromosome 5 clone CTB-146E17, complete sequence
          Length = 139029

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 54     tcaataataaacatatatttt 74
              |||||||||||||||||||||
Sbjct: 110560 tcaataataaacatatatttt 110540
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>gb|AC008565.6|AC008565 Homo sapiens chromosome 5 clone CTC-538F12, complete sequence
          Length = 167086

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 54    tcaataataaacatatatttt 74
             |||||||||||||||||||||
Sbjct: 12690 tcaataataaacatatatttt 12710
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>gb|AC117080.2| Dictyostelium discoideum chromosome 2 map complement(821514-735598)
             strain AX4, complete sequence
          Length = 85916

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 44    aaaactaaaatcaataataaa 64
             |||||||||||||||||||||
Sbjct: 20262 aaaactaaaatcaataataaa 20282
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>dbj|AK105255.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-F02, full
            insert sequence
          Length = 2441

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 227  agcttaatttgtgcaccatgc 247
            |||||||||||||||||||||
Sbjct: 1696 agcttaatttgtgcaccatgc 1676
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>dbj|AK101545.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048K24, full
            insert sequence
          Length = 1903

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 227  agcttaatttgtgcaccatgc 247
            |||||||||||||||||||||
Sbjct: 1700 agcttaatttgtgcaccatgc 1680
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>gb|AC155330.3| Mus musculus 6 BAC RP24-146L23 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 215602

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 153    aaccactaaacactatgtaat 173
              |||||||||||||||||||||
Sbjct: 156635 aaccactaaacactatgtaat 156655
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>emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0701F11, complete
             sequence
          Length = 82895

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 56    aataataaacatatatttttctact 80
             |||||| ||||||||||||||||||
Sbjct: 75867 aataatcaacatatatttttctact 75891
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>gb|AC118614.12| Mus musculus chromosome 18, clone RP23-477B20, complete sequence
          Length = 159912

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 48    ctaaaatcaataataaacata 68
             |||||||||||||||||||||
Sbjct: 56421 ctaaaatcaataataaacata 56441
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>dbj|AB047400.1| Oryza sativa (japonica cultivar-group) Rice2 mRNA for cytochrome
            P450, complete cds
          Length = 1572

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 227  agcttaatttgtgcaccatgc 247
            |||||||||||||||||||||
Sbjct: 1559 agcttaatttgtgcaccatgc 1539
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>ref|XM_638180.1| Dictyostelium discoideum hypothetical protein (DDB0185220), partial
            mRNA
          Length = 3291

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 34   gtataacatgaaaactaaaatcaa 57
            ||||||||||||||||| ||||||
Sbjct: 1951 gtataacatgaaaactataatcaa 1928
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>gb|AC145366.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0014O08 map near S2137, complete sequence
          Length = 134033

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    acatgaaaactaaaatcaat 58
             ||||||||||||||||||||
Sbjct: 90010 acatgaaaactaaaatcaat 90029
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>gb|AC151060.4| Bos taurus  BAC CH240-293H4 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 160650

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    taataaacatatatttttct 77
             ||||||||||||||||||||
Sbjct: 82939 taataaacatatatttttct 82920
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>gb|AC011249.7| Drosophila melanogaster clone BACR37F23, complete sequence
          Length = 164973

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   aataataaacatatattttt 75
            ||||||||||||||||||||
Sbjct: 3506 aataataaacatatattttt 3525
to top
>gb|AC110102.6| Rattus norvegicus 4 BAC CH230-209C7 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 219273

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 41    atgaaaactaaaatcaataataaa 64
             ||||||||||||||||| ||||||
Sbjct: 69974 atgaaaactaaaatcaaaaataaa 69997
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>gb|AC146485.2| Xenopus tropicalis clone CH216-8M11, complete sequence
          Length = 191742

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    aaaatcaataataaacatat 69
             ||||||||||||||||||||
Sbjct: 39419 aaaatcaataataaacatat 39400
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>gb|AC098390.6| Rattus norvegicus 1 BAC CH230-1M24 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 196477

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 50     aaaatcaataataaacatatattt 73
              ||||||||||||| ||||||||||
Sbjct: 100609 aaaatcaataatatacatatattt 100586
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>gb|AC116979.3| Dictyostelium discoideum chromosome 2 map 6445720-6776760 strain AX4,
              complete sequence
          Length = 331039

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 34     gtataacatgaaaactaaaatcaa 57
              ||||||||||||||||| ||||||
Sbjct: 236410 gtataacatgaaaactataatcaa 236387
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>gb|AC111096.15| Mus musculus chromosome 3, clone RP23-174B18, complete sequence
          Length = 209936

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 229    cttaatttgtgcaccatgca 248
              ||||||||||||||||||||
Sbjct: 156663 cttaatttgtgcaccatgca 156682
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>gb|AC144636.4| Artibeus jamaicensis clone 1A13, complete sequence
          Length = 114691

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 48    ctaaaatcaataataaacatatattttt 75
             ||||||||||||| ||| ||||||||||
Sbjct: 93349 ctaaaatcaataaaaaatatatattttt 93322
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>gb|AC142294.1| Pan troglodytes BAC clone RP43-73M4 from 7, complete sequence
          Length = 173444

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   atttgtatgtatgaaagcat 141
             ||||||||||||||||||||
Sbjct: 32821 atttgtatgtatgaaagcat 32840
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>emb|AL512410.14| Human DNA sequence from clone RP11-100E6 on chromosome 6, complete
              sequence
          Length = 160891

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 55     caataataaacatatatttttcta 78
              |||||||||| |||||||||||||
Sbjct: 139261 caataataaaaatatatttttcta 139238
to top
>emb|AL158070.11| Human DNA sequence from clone RP11-235C23 on chromosome 9q31.1-31.3
              Contains part of a pseudogene similar to KIAA1272,
              KIAA0884, Drosophila CG5521 and rat Tulip 1 and 2 proteins,
              the 3' end of the CSDUFD1 gene for cystatin and DUF19
              domain containing 1, a novel gene, the FCMD gene for
              Fukuyama type congenital muscular dystrophy protein, the
              TAL2 gene for T-cell acute lymphocytic leukemia 2 protein
              and two CpG islands, complete sequence
          Length = 167005

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 173    taaaatggcatcatgcacactgct 196
              |||||||||||||||||| |||||
Sbjct: 119587 taaaatggcatcatgcaccctgct 119564
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>emb|CR536604.6| Zebrafish DNA sequence from clone DKEY-57A22 in linkage group 9, complete
              sequence
          Length = 217381

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     caataataaacatatatttt 74
              ||||||||||||||||||||
Sbjct: 171179 caataataaacatatatttt 171160
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>emb|CR848759.4| Zebrafish DNA sequence from clone CH211-229D2 in linkage group 15,
              complete sequence
          Length = 167536

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 108    actttattccaaacatttgt 127
              ||||||||||||||||||||
Sbjct: 117061 actttattccaaacatttgt 117080
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>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete
             sequence
          Length = 984602

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    aaaactaaaatcaataataa 63
             ||||||||||||||||||||
Sbjct: 37377 aaaactaaaatcaataataa 37396
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>emb|AL035476.7|PFMAL4P3 Plasmodium falciparum MAL4P3
          Length = 349751

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 50    aaaatcaataataaacatatattt 73
             ||||| ||||||||||||||||||
Sbjct: 87935 aaaataaataataaacatatattt 87912
to top
>gb|AC121515.3| Rattus norvegicus strain Brown Norway clone RP31-425H6, complete
             sequence
          Length = 152757

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 41    atgaaaactaaaatcaataataaa 64
             ||||||||||||||||| ||||||
Sbjct: 37165 atgaaaactaaaatcaaaaataaa 37142
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>emb|CR354424.7| Zebrafish DNA sequence from clone CH211-125L9 in linkage group 24,
             complete sequence
          Length = 156999

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    aaactaaaatcaataataaa 64
             ||||||||||||||||||||
Sbjct: 52774 aaactaaaatcaataataaa 52755
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>gb|AF481922.1| Dictyostelium discoideum cAMP/cGMP-stimulated cAMP/cGMP
            phosphodiesterase (gbpB) gene, complete cds
          Length = 3671

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 34   gtataacatgaaaactaaaatcaa 57
            ||||||||||||||||| ||||||
Sbjct: 2281 gtataacatgaaaactataatcaa 2258
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>gb|AC118470.2| Homo sapiens chromosome 1 clone RP11-634B7, complete sequence
          Length = 59105

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    atcttcctttccatagtagt 35
             ||||||||||||||||||||
Sbjct: 50292 atcttcctttccatagtagt 50311
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>gb|DP000001.1| Artibeus jamaicensis target 1 genomic scaffold
          Length = 584809

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 48     ctaaaatcaataataaacatatattttt 75
              ||||||||||||| ||| ||||||||||
Sbjct: 417908 ctaaaatcaataaaaaatatatattttt 417881
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>gb|AY047364.1| Dictyostelium discoideum cAMP phosphodiesterase (PdeE) gene, complete
            cds
          Length = 6540

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 34   gtataacatgaaaactaaaatcaa 57
            ||||||||||||||||| ||||||
Sbjct: 4254 gtataacatgaaaactataatcaa 4231
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>gb|AC092230.1|AC092230 Drosophila melanogaster, chromosome 2L, region 26F-27X, BAC clone
             BACR25K24, complete sequence
          Length = 174376

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    aataataaacatatattttt 75
             ||||||||||||||||||||
Sbjct: 34110 aataataaacatatattttt 34091
to top
>gb|AC017087.5|AC017087 Homo sapiens BAC clone RP11-495H13 from 4, complete sequence
          Length = 171745

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 52    aatcaataataaacatatattttt 75
             ||||||||||||| ||||||||||
Sbjct: 12547 aatcaataataaatatatattttt 12524
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 39      acatgaaaactaaaatcaat 58
               ||||||||||||||||||||
Sbjct: 8678844 acatgaaaactaaaatcaat 8678863
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>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold
          Length = 1888123

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 41     atgaaaactaaaatcaataataaa 64
              ||||||||||||||||| ||||||
Sbjct: 373186 atgaaaactaaaatcaaaaataaa 373163
to top
>gb|AC092682.2| Homo sapiens BAC clone RP11-734C21 from 2, complete sequence
          Length = 188920

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     aaaactaaaatcaataataa 63
              ||||||||||||||||||||
Sbjct: 154717 aaaactaaaatcaataataa 154698
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>gb|AC145893.2| Pan troglodytes BAC clone RP43-8C18 from chromosome 7, complete sequence
          Length = 161780

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    atttgtatgtatgaaagcat 141
              ||||||||||||||||||||
Sbjct: 129625 atttgtatgtatgaaagcat 129644
to top
>gb|AC117457.11| Homo sapiens 3 BAC RP11-385J1 (Roswell Park Cancer Institute Human
           BAC Library) complete sequence
          Length = 204899

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 160 aaacactatgtaataaaatg 179
           ||||||||||||||||||||
Sbjct: 319 aaacactatgtaataaaatg 300
to top
>gb|AC139661.5| Homo sapiens 3 BAC RP11-102O12 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 12829

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 160  aaacactatgtaataaaatg 179
            ||||||||||||||||||||
Sbjct: 1682 aaacactatgtaataaaatg 1701
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>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome
          Length = 1358633

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     aataataaacatatattttt 75
              ||||||||||||||||||||
Sbjct: 852335 aataataaacatatattttt 852354
to top
>emb|BX255896.4| Zebrafish DNA sequence from clone CH211-249O11 in linkage group 2,
             complete sequence
          Length = 150289

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    aaaatcaataataaacatat 69
             ||||||||||||||||||||
Sbjct: 67643 aaaatcaataataaacatat 67624
to top
>gb|AE003614.4| Drosophila melanogaster chromosome 2L, section 23 of 83 of the complete
             sequence
          Length = 259718

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    aataataaacatatattttt 75
             ||||||||||||||||||||
Sbjct: 60666 aataataaacatatattttt 60647
to top
>gb|AY613856.1| Oikopleura dioica clone BACOIKO008 5xo15, complete sequence
          Length = 174913

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    aaactaaaatcaataataaa 64
             ||||||||||||||||||||
Sbjct: 21454 aaactaaaatcaataataaa 21473
to top
>emb|AL935293.11| Zebrafish DNA sequence from clone CH211-251D10 in linkage group 10,
             complete sequence
          Length = 188908

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    agtataacatgaaaactaaa 52
             ||||||||||||||||||||
Sbjct: 45273 agtataacatgaaaactaaa 45292
to top
>dbj|AB084070.1| Mycoplasma penetrans gene for lipoprotein P42, complete cds
          Length = 2020

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 56  aataataaacatatattttt 75
           ||||||||||||||||||||
Sbjct: 556 aataataaacatatattttt 575
to top
>emb|CR955004.2| Medicago truncatula chromosome 5 clone mte1-9e19, COMPLETE SEQUENCE
          Length = 116493

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    aaaactaaaatcaataataa 63
             ||||||||||||||||||||
Sbjct: 52939 aaaactaaaatcaataataa 52958
to top
>gb|AF033210.1|AF033210 Pneumocystis carinii f. sp. hominis clone HuMSG33 major surface
           glycoprotein (MSG) gene, partial cds
          Length = 3056

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 208 tcatcatcatattgccctga 227
           ||||||||||||||||||||
Sbjct: 55  tcatcatcatattgccctga 36
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 39      acatgaaaactaaaatcaat 58
               ||||||||||||||||||||
Sbjct: 8749607 acatgaaaactaaaatcaat 8749626
to top
>emb|AL512310.4|CNS07EF1 Human chromosome 14 DNA sequence BAC R-597A11 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 185605

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    aaaactaaaatcaataataa 63
             ||||||||||||||||||||
Sbjct: 28647 aaaactaaaatcaataataa 28666
to top
>gb|AC147971.2| Gallus gallus BAC clone CH261-79K6 from chromosome unknown, complete
              sequence
          Length = 229445

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    tccaaacatttgtatgtatg 134
              ||||||||||||||||||||
Sbjct: 177450 tccaaacatttgtatgtatg 177469
to top
>emb|AL929530.9| Zebrafish DNA sequence from clone CH211-190H2, complete sequence
          Length = 152963

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 108    actttattccaaacatttgt 127
              ||||||||||||||||||||
Sbjct: 125816 actttattccaaacatttgt 125835
to top
>dbj|AB241456.1| Lotus japonicus TINod gene for transcription initiator for
            nodulation, complete cds
          Length = 23401

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 110  tttattccaaacatttgtatgtat 133
            |||| |||||||||||||||||||
Sbjct: 4811 tttaatccaaacatttgtatgtat 4788
to top
>ref|NM_006731.1| Homo sapiens Fukuyama type congenital muscular dystrophy (fukutin)
            (FCMD), mRNA
          Length = 7349

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 173  taaaatggcatcatgcacactgct 196
            |||||||||||||||||| |||||
Sbjct: 6366 taaaatggcatcatgcaccctgct 6343
to top
>dbj|AB008226.1| Homo sapiens FCMD mRNA for fukutin, complete cds
          Length = 7349

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 173  taaaatggcatcatgcacactgct 196
            |||||||||||||||||| |||||
Sbjct: 6366 taaaatggcatcatgcaccctgct 6343
to top
>dbj|AB038490.1| Homo sapiens gene for fukutin, complete cds
          Length = 131892

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 173    taaaatggcatcatgcacactgct 196
              |||||||||||||||||| |||||
Sbjct: 116162 taaaatggcatcatgcaccctgct 116139


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,766,863
Number of Sequences: 3902068
Number of extensions: 3766863
Number of successful extensions: 102377
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101994
Number of HSP's gapped (non-prelim): 383
length of query: 277
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 255
effective length of database: 17,147,199,772
effective search space: 4372535941860
effective search space used: 4372535941860
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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