ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart28g11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZRP4_MAIZE (P47917) O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT) 55 9e-08
27OMT9_MEDSA (O22309) Isoflavone-7-O-methytransferase 9 (EC 2.1.1... 45 1e-04
37OMT8_MEDSA (O24529) Isoflavone-7-O-methytransferase 8 (EC 2.1.1... 45 1e-04
47OMT6_MEDSA (O22308) Isoflavone-7-O-methytransferase 6 (EC 2.1.1... 45 1e-04
5EOMT1_OCIBA (Q93WU2) Eugenol O-methyltransferase (EC 2.1.1.146) ... 42 0.001
6CVMT1_OCIBA (Q93WU3) Chavicol O-methyltransferase (EC 2.1.1.146)... 41 0.002
76OMT_COPJA (Q9LEL6) (RS)-norcoclaurine 6-O-methyltransferase (EC... 38 0.015
84OMT_COPJA (Q9LEL5) 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-meth... 35 0.17
9NRFE_ECOLI (P32710) Cytochrome c-type biogenesis protein nrfE 31 2.4
10QUEA_CLOPE (Q8XJ15) S-adenosylmethionine:tRNA ribosyltransferase... 29 7.1
11CTX_PSEAE (P14608) Cytotoxin precursor (Leucocidin) 29 9.2

>ZRP4_MAIZE (P47917) O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)|
          Length = 364

 Score = 55.5 bits (132), Expect = 9e-08
 Identities = 21/42 (50%), Positives = 32/42 (76%)
 Frame = -2

Query: 521 MVMTNGRQRDETDWSEIFIKAGFSDYKVVKKLGARGVFEVYP 396
           ++  NG +RDE +WS+IF +AG+SDY+++  LG R + EVYP
Sbjct: 323 IMFINGMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP 364



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>7OMT9_MEDSA (O22309) Isoflavone-7-O-methytransferase 9 (EC 2.1.1.150)|
           (Isoflavone-O-methytransferase 9) (7 IOMT-9)
          Length = 352

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 17/42 (40%), Positives = 27/42 (64%)
 Frame = -2

Query: 521 MVMTNGRQRDETDWSEIFIKAGFSDYKVVKKLGARGVFEVYP 396
           M   NG++R+E +W ++FI+AGF  YK+    G   + E+YP
Sbjct: 311 MACLNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352



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>7OMT8_MEDSA (O24529) Isoflavone-7-O-methytransferase 8 (EC 2.1.1.150)|
           (Isoflavone-O-methytransferase 8) (7-IOMT-8)
          Length = 352

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 17/42 (40%), Positives = 27/42 (64%)
 Frame = -2

Query: 521 MVMTNGRQRDETDWSEIFIKAGFSDYKVVKKLGARGVFEVYP 396
           M   NG++R+E +W ++FI+AGF  YK+    G   + E+YP
Sbjct: 311 MACLNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352



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>7OMT6_MEDSA (O22308) Isoflavone-7-O-methytransferase 6 (EC 2.1.1.150)|
           (Isoflavone-O-methytransferase 6) (7-IOMT-6)
          Length = 352

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 17/42 (40%), Positives = 27/42 (64%)
 Frame = -2

Query: 521 MVMTNGRQRDETDWSEIFIKAGFSDYKVVKKLGARGVFEVYP 396
           M   NG++R+E +W ++FI+AGF  YK+    G   + E+YP
Sbjct: 311 MACLNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352



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>EOMT1_OCIBA (Q93WU2) Eugenol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol|
           O-methyltransferase EOMT1)
           (S-adenosysl-L-methionine:(Iso)eugenol
           O-methyltransferase EOMT1)
          Length = 357

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -2

Query: 530 VAMMVMTNGRQRDETDWSEIFIKAGFSDYKVVKKLGARGVFEVYP 396
           +AMM   N ++R  ++W ++   AGF  YK+    G R + E YP
Sbjct: 313 MAMMCYFNAKERTMSEWEKLIYDAGFKSYKLTPAFGVRSLIEAYP 357



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>CVMT1_OCIBA (Q93WU3) Chavicol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol|
           O-methyltransferase CVOMT1)
           (S-adenosysl-L-methionine:(Iso)eugenol
           O-methyltransferase CVOMT1)
          Length = 356

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -2

Query: 530 VAMMVMTNGRQRDETDWSEIFIKAGFSDYKVVKKLGARGVFEVYP 396
           +AMM   N ++R   +W ++   AGF+ YK+    G R + E YP
Sbjct: 312 MAMMSYFNAKERTMNEWEKLISAAGFTSYKLTPAFGVRSLIEAYP 356



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>6OMT_COPJA (Q9LEL6) (RS)-norcoclaurine 6-O-methyltransferase (EC 2.1.1.128)|
           (S-adenosyl-L-methionine:norcoclaurine
           6-O-methyltransferase) (6-OMT)
          Length = 347

 Score = 38.1 bits (87), Expect = 0.015
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -2

Query: 524 MMVMTNGRQRDETDWSEIFIKAGFSDYKVVKKLGARGVFEVYP 396
           MM+ T G++R E +W ++   AG+  +K+ +    + V E YP
Sbjct: 304 MMLNTGGKERTEEEWKKLIHDAGYKGHKITQITAVQSVIEAYP 346



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>4OMT_COPJA (Q9LEL5) 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase|
           (EC 2.1.1.116)
           (S-adenosyl-L-methionine:3'-hydroxy-N-methylcoclaurine
           4'-O-methyltransferase) (4'-OMT)
          Length = 350

 Score = 34.7 bits (78), Expect = 0.17
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -2

Query: 530 VAMMVMTNGRQRDETDWSEIFIKAGFSDYKVVKKLGARGVFEVYP 396
           + M+V T G++R +  W +I   AGFS  K+      + V EV+P
Sbjct: 306 IDMLVNTGGKERTKEVWEKIVKSAGFSGCKIRHIAAIQSVIEVFP 350



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>NRFE_ECOLI (P32710) Cytochrome c-type biogenesis protein nrfE|
          Length = 552

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2

Query: 212 KVRWGVMHNMGCYALLVTFQSVKLLFGVLKHSVCFSEYRV 93
           ++RW  M  + C  +L  F  + L FGVL +    S++ V
Sbjct: 12  RLRWPAMMRLTCIGILAQFALLLLAFGVLTYCFLISDFSV 51



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>QUEA_CLOPE (Q8XJ15) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC|
           5.-.-.-) (Queuosine biosynthesis protein queA)
          Length = 341

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -2

Query: 509 NGRQRDETDWSEIFIKAGFSDYKVVKKL 426
           NGR R+++ W++IFI  G+  +K+V  L
Sbjct: 267 NGRVREQSGWTDIFIYPGYK-FKIVDNL 293



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>CTX_PSEAE (P14608) Cytotoxin precursor (Leucocidin)|
          Length = 286

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = -3

Query: 301 EYYNLWFASVDVLYGNCLTLPDMSGG*YCTR*DGVLCIIWGAMHSWLLSNL 149
           +Y+ LWF  V+ ++  C+    ++   Y  + +GVL    G  HS +  NL
Sbjct: 199 DYHYLWFIPVEQVFWECVQHNIVNTSGYVVQGNGVLAQATGTFHSSVGLNL 249


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,192,015
Number of Sequences: 219361
Number of extensions: 1656795
Number of successful extensions: 3541
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3541
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4085413911
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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