ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart28g11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome... 88 3e-14
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 88 3e-14
4gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome... 76 1e-10
5gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P1... 64 5e-07
6dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clon... 64 5e-07
7dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
8dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
9dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
10gb|AC113334.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
11emb|CR962137.2| Medicago truncatula chromosome 5 clone mte1-10p1... 42 1.8
12gb|AC127169.13| Medicago truncatula clone mth2-36n3, complete se... 42 1.8
13gb|AC108075.3| Homo sapiens BAC clone RP11-728C8 from 4, complet... 42 1.8
14dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
15gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein... 42 1.8
16gb|AE014133.1| Streptococcus mutans UA159, complete genome 42 1.8
17gb|AY107519.1| Zea mays PCO078033 mRNA sequence 42 1.8
18gb|AC156998.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
19dbj|AP004972.1| Lotus japonicus genomic DNA, chromosome 3, clone... 42 1.8
20gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
21gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
22gb|AC101921.8| Mus musculus chromosome 15, clone RP24-176G17, co... 40 7.2
23gb|AC143341.8| Medicago truncatula clone mth2-7a11, complete seq... 40 7.2
24gb|AC139526.22| Medicago truncatula clone mth2-9b23, complete se... 40 7.2
25gb|AC148239.7| Medicago truncatula clone mth2-5d7, complete sequ... 40 7.2
26gb|AC146865.11| Medicago truncatula clone mth2-36m14, complete s... 40 7.2
27emb|AL449188.2| Human DNA sequence from clone RP11-460G6 on chro... 40 7.2
28emb|AL157776.15| Human DNA sequence from clone RP11-68J15 on chr... 40 7.2
29gb|AC164432.3| Mus musculus BAC clone RP23-394G23 from chromosom... 40 7.2
30gb|AC157360.9| Mus musculus chromosome 8, clone RP23-420E22, com... 40 7.2
31emb|AL732397.5| Mouse DNA sequence from clone RP23-469O11 on chr... 40 7.2
32emb|AJ841705.1| Isatis tinctoria tsa gene for tryptophan synthas... 40 7.2
33gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete ... 40 7.2
34gb|AC069540.6| Homo sapiens chromosome 10 clone RP11-344L13, com... 40 7.2
35gb|AC011390.3| Homo sapiens chromosome 5 clone CTB-176I15, compl... 40 7.2
36gb|AC010235.7| Homo sapiens chromosome 5 clone CTC-339D2, comple... 40 7.2
37gb|AC153020.5| Mus musculus BAC clone RP23-88P1 from chromosome ... 40 7.2
38gb|AC154255.2| Mus musculus BAC clone RP24-202K20 from chromosom... 40 7.2
39gb|AC094022.3| Homo sapiens chromosome 1 clone RP11-88N11, compl... 40 7.2
40gb|DQ267495.1| Uncultured delta proteobacterium DeepAnt-1F12 fos... 40 7.2
41dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
42gb|L09217.1|ICTORDA Ictalurus punctatus olfactory receptor 1 mRN... 40 7.2
43gb|AC091971.4| Homo sapiens chromosome 5 clone RP11-511F22, comp... 40 7.2
44emb|AJ243213.1|HSA243213 Homo sapiens partial 5-HT4 receptor gen... 40 7.2
45gb|AE014299.1| Shewanella oneidensis MR-1, complete genome 40 7.2
46gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
47emb|AL844498.4|CNS08CAV Oryza sativa chromosome 12, . BAC OSJNBb... 40 7.2
48gb|AC134525.5| Mus musculus BAC clone RP24-496F7 from 8, complet... 40 7.2
49emb|CT030158.4| M.truncatula DNA sequence from clone MTH2-49E10 ... 40 7.2
50dbj|AP006143.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 7.2
51dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 7.2
52emb|AL824707.7| Mouse DNA sequence from clone RP23-95O1 on chrom... 40 7.2 
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05
              map C53961S, complete sequence
          Length = 175121

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 107/128 (83%)
 Strand = Plus / Plus

                                                                          
Query: 397    gggtagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaat 456
              ||||||||||||||||| ||||||||||| |||||||||||||  || ||||||||||| 
Sbjct: 140247 gggtagacctcaaagacgcctcgagctcccagtttcttcacaatattgtagtcactgaag 140306

                                                                          
Query: 457    cctgccttgatgaatatctcgctccagtcagtttcatcccgctgccggccattggtcatc 516
              ||||| ||| |||| |  || | ||| ||| | || || ||||| ||||| ||||||| |
Sbjct: 140307 cctgctttgctgaagagatcacgccaatcattctcgtctcgctgtcggcctttggtcacc 140366

                      
Query: 517    accatcat 524
              ||||||||
Sbjct: 140367 accatcat 140374



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 54/62 (87%), Gaps = 1/62 (1%)
 Strand = Plus / Plus

                                                                          
Query: 400    tagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaatcct 459
              ||||||||||| | | |||||||||| |||| ||||||||  |||||||||||||| |||
Sbjct: 138364 tagacctcaaatatagctcgagctcccagtt-cttcacaatcttatagtcactgaagcct 138422

                
Query: 460    gc 461
              ||
Sbjct: 138423 gc 138424



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 104/130 (80%)
 Strand = Plus / Plus

                                                                          
Query: 395    acgggtagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactga 454
              |||| ||||||||||||||| |||||||||  | ||| |||||||  ||||||| | |||
Sbjct: 115954 acggatagacctcaaagacagctcgagctctcaattttttcacaatcttatagttattga 116013

                                                                          
Query: 455    atcctgccttgatgaatatctcgctccagtcagtttcatcccgctgccggccattggtca 514
              | ||||| ||  |||| |  || | ||||||| |||| || ||||| ||||| |||||| 
Sbjct: 116014 agcctgctttcttgaagagatcacgccagtcattttcgtctcgctgtcggcctttggtcg 116073

                        
Query: 515    tcaccatcat 524
               |||||||||
Sbjct: 116074 ccaccatcat 116083
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 107/128 (83%)
 Strand = Plus / Plus

                                                                            
Query: 397      gggtagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaat 456
                ||||||||||||||||| ||||||||||| |||||||||||||  || ||||||||||| 
Sbjct: 11353889 gggtagacctcaaagacgcctcgagctcccagtttcttcacaatattgtagtcactgaag 11353948

                                                                            
Query: 457      cctgccttgatgaatatctcgctccagtcagtttcatcccgctgccggccattggtcatc 516
                ||||| ||| |||| |  || | ||| ||| | || || ||||| ||||| ||||||| |
Sbjct: 11353949 cctgctttgctgaagagatcacgccaatcattctcgtctcgctgtcggcctttggtcacc 11354008

                        
Query: 517      accatcat 524
                ||||||||
Sbjct: 11354009 accatcat 11354016



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                            
Query: 400      tagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaatcct 459
                |||||||| |||||| ||||||| || |||||||||||||  ||||||||||||||||||
Sbjct: 11549317 tagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaatcct 11549376

                  
Query: 460      gc 461
                ||
Sbjct: 11549377 gc 11549378



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                            
Query: 393      tcacgggtagacctcaaagacacctcgagctcctagtttcttca 436
                ||||||||||||||||| ||||| ||||||||||||||| ||||
Sbjct: 11485511 tcacgggtagacctcaatgacacatcgagctcctagtttgttca 11485468



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                            
Query: 400      tagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaatcct 459
                |||||||| || || ||||||||||| ||  |||||||||  ||||||||| ||||||||
Sbjct: 11490631 tagacctcgaaaactcctcgagctccaagcatcttcacaatcttatagtcattgaatcct 11490690

                  
Query: 460      gc 461
                ||
Sbjct: 11490691 gc 11490692



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 54/62 (87%), Gaps = 1/62 (1%)
 Strand = Plus / Plus

                                                                            
Query: 400      tagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaatcct 459
                ||||||||||| | | |||||||||| |||| ||||||||  |||||||||||||| |||
Sbjct: 11352006 tagacctcaaatatagctcgagctcccagtt-cttcacaatcttatagtcactgaagcct 11352064

                  
Query: 460      gc 461
                ||
Sbjct: 11352065 gc 11352066



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 104/130 (80%)
 Strand = Plus / Plus

                                                                            
Query: 395      acgggtagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactga 454
                |||| ||||||||||||||| |||||||||  | ||| |||||||  ||||||| | |||
Sbjct: 11329596 acggatagacctcaaagacagctcgagctctcaattttttcacaatcttatagttattga 11329655

                                                                            
Query: 455      atcctgccttgatgaatatctcgctccagtcagtttcatcccgctgccggccattggtca 514
                | ||||| ||  |||| |  || | ||||||| |||| || ||||| ||||| |||||| 
Sbjct: 11329656 agcctgctttcttgaagagatcacgccagtcattttcgtctcgctgtcggcctttggtcg 11329715

                          
Query: 515      tcaccatcat 524
                 |||||||||
Sbjct: 11329716 ccaccatcat 11329725



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                        
Query: 400      tagacctcaaagacacctcgagctcctagtttcttcacaa 439
                |||||||||||||  ||||||  |||||| ||||||||||
Sbjct: 11437244 tagacctcaaagatgcctcgaattcctagcttcttcacaa 11437283



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                           
Query: 391     tctcacgggtagacctcaaagacacctcgagctcctagtttcttcacaactttatagtca 450
               ||||| || |||||||| || ||| |||||||||| || |||||  | |  |||||||||
Sbjct: 7137523 tctcatggatagacctcgaacacagctcgagctccgagcttcttggcgatcttatagtca 7137582

                       
Query: 451     ctgaatcc 458
               ||||||||
Sbjct: 7137583 ctgaatcc 7137590
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 107/128 (83%)
 Strand = Plus / Plus

                                                                            
Query: 397      gggtagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaat 456
                ||||||||||||||||| ||||||||||| |||||||||||||  || ||||||||||| 
Sbjct: 11433078 gggtagacctcaaagacgcctcgagctcccagtttcttcacaatattgtagtcactgaag 11433137

                                                                            
Query: 457      cctgccttgatgaatatctcgctccagtcagtttcatcccgctgccggccattggtcatc 516
                ||||| ||| |||| |  || | ||| ||| | || || ||||| ||||| ||||||| |
Sbjct: 11433138 cctgctttgctgaagagatcacgccaatcattctcgtctcgctgtcggcctttggtcacc 11433197

                        
Query: 517      accatcat 524
                ||||||||
Sbjct: 11433198 accatcat 11433205



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                            
Query: 400      tagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaatcct 459
                |||||||| |||||| ||||||| || |||||||||||||  ||||||||||||||||||
Sbjct: 11628506 tagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaatcct 11628565

                  
Query: 460      gc 461
                ||
Sbjct: 11628566 gc 11628567



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                            
Query: 393      tcacgggtagacctcaaagacacctcgagctcctagtttcttca 436
                ||||||||||||||||| ||||| ||||||||||||||| ||||
Sbjct: 11564700 tcacgggtagacctcaatgacacatcgagctcctagtttgttca 11564657



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                            
Query: 400      tagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaatcct 459
                |||||||| || || ||||||||||| ||  |||||||||  ||||||||| ||||||||
Sbjct: 11569820 tagacctcgaaaactcctcgagctccaagcatcttcacaatcttatagtcattgaatcct 11569879

                  
Query: 460      gc 461
                ||
Sbjct: 11569880 gc 11569881



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 54/62 (87%), Gaps = 1/62 (1%)
 Strand = Plus / Plus

                                                                            
Query: 400      tagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaatcct 459
                ||||||||||| | | |||||||||| |||| ||||||||  |||||||||||||| |||
Sbjct: 11431195 tagacctcaaatatagctcgagctcccagtt-cttcacaatcttatagtcactgaagcct 11431253

                  
Query: 460      gc 461
                ||
Sbjct: 11431254 gc 11431255



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 104/130 (80%)
 Strand = Plus / Plus

                                                                            
Query: 395      acgggtagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactga 454
                |||| ||||||||||||||| |||||||||  | ||| |||||||  ||||||| | |||
Sbjct: 11408785 acggatagacctcaaagacagctcgagctctcaattttttcacaatcttatagttattga 11408844

                                                                            
Query: 455      atcctgccttgatgaatatctcgctccagtcagtttcatcccgctgccggccattggtca 514
                | ||||| ||  |||| |  || | ||||||| |||| || ||||| ||||| |||||| 
Sbjct: 11408845 agcctgctttcttgaagagatcacgccagtcattttcgtctcgctgtcggcctttggtcg 11408904

                          
Query: 515      tcaccatcat 524
                 |||||||||
Sbjct: 11408905 ccaccatcat 11408914



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                        
Query: 400      tagacctcaaagacacctcgagctcctagtttcttcacaa 439
                |||||||||||||  ||||||  |||||| ||||||||||
Sbjct: 11516433 tagacctcaaagatgcctcgaattcctagcttcttcacaa 11516472



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                           
Query: 391     tctcacgggtagacctcaaagacacctcgagctcctagtttcttcacaactttatagtca 450
               ||||| || |||||||| || ||| |||||||||| || |||||  | |  |||||||||
Sbjct: 7203494 tctcatggatagacctcgaacacagctcgagctccgagcttcttggcgatcttatagtca 7203553

                       
Query: 451     ctgaatcc 458
               ||||||||
Sbjct: 7203554 ctgaatcc 7203561
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>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0005P21, complete sequence
          Length = 147381

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                         
Query: 400   tagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaatcct 459
             |||||||| |||||| ||||||| || |||||||||||||  ||||||||||||||||||
Sbjct: 64471 tagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaatcct 64412

               
Query: 460   gc 461
             ||
Sbjct: 64411 gc 64410



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                          
Query: 393    tcacgggtagacctcaaagacacctcgagctcctagtttcttca 436
              ||||||||||||||||| ||||| ||||||||||||||| ||||
Sbjct: 128277 tcacgggtagacctcaatgacacatcgagctcctagtttgttca 128320



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                          
Query: 400    tagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaatcct 459
              |||||||| || || ||||||||||| ||  |||||||||  ||||||||| ||||||||
Sbjct: 123157 tagacctcgaaaactcctcgagctccaagcatcttcacaatcttatagtcattgaatcct 123098

                
Query: 460    gc 461
              ||
Sbjct: 123097 gc 123096
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>gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence
          Length = 128418

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                         
Query: 393   tcacgggtagacctcaaagacacctcgagctcctagtttcttca 436
             ||||||||||||||||| ||||| ||||||||||||||| ||||
Sbjct: 14026 tcacgggtagacctcaatgacacatcgagctcctagtttgttca 14069



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 400  tagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaatcct 459
            |||||||| || || ||||||||||| ||  |||||||||  ||||||||| ||||||||
Sbjct: 8906 tagacctcgaaaactcctcgagctccaagcatcttcacaatcttatagtcattgaatcct 8847

              
Query: 460  gc 461
            ||
Sbjct: 8846 gc 8845



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 400   tagacctcaaagacacctcgagctcctagtttcttcacaa 439
             |||||||||||||  ||||||  |||||| ||||||||||
Sbjct: 62293 tagacctcaaagatgcctcgaattcctagcttcttcacaa 62254
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>dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A06, full
            insert sequence
          Length = 1300

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                        
Query: 393  tcacgggtagacctcaaagacacctcgagctcctagtttcttca 436
            ||||||||||||||||| ||||| ||||||||||||||| ||||
Sbjct: 1191 tcacgggtagacctcaatgacacatcgagctcctagtttgttca 1148
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>dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C11, full
            insert sequence
          Length = 1362

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 400  tagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaatcct 459
            |||||||| || || ||||||||||| ||  |||||||||  ||||||||| ||||||||
Sbjct: 1150 tagacctcgaaaactcctcgagctccaagcatcttcacaatcttatagtcattgaatcct 1091

              
Query: 460  gc 461
            ||
Sbjct: 1090 gc 1089
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>dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E05, full
            insert sequence
          Length = 1262

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 104/130 (80%)
 Strand = Plus / Minus

                                                                        
Query: 395  acgggtagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactga 454
            |||| ||||||||||||||| |||||||||  | ||| |||||||  ||||||| | |||
Sbjct: 1169 acggatagacctcaaagacagctcgagctctcaattttttcacaatcttatagttattga 1110

                                                                        
Query: 455  atcctgccttgatgaatatctcgctccagtcagtttcatcccgctgccggccattggtca 514
            | ||||| ||  |||| |  || | ||||||| |||| || ||||| ||||| |||||| 
Sbjct: 1109 agcctgctttcttgaagagatcacgccagtcattttcgtctcgctgtcggcctttggtcg 1050

                      
Query: 515  tcaccatcat 524
             |||||||||
Sbjct: 1049 ccaccatcat 1040
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>dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H05, full
            insert sequence
          Length = 1264

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 400  tagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaatcct 459
            |||||||| || || ||||||||||| ||  |||||||||  ||||||||| ||||||||
Sbjct: 1155 tagacctcgaaaactcctcgagctccaagcatcttcacaatcttatagtcattgaatcct 1096

              
Query: 460  gc 461
            ||
Sbjct: 1095 gc 1094
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>gb|AC113334.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_F01,
             complete sequence
          Length = 118799

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 296   atactccctccgatcctaattaattgacg 324
             |||||||||||| |||||| |||||||||
Sbjct: 42844 atactccctccgttcctaaataattgacg 42872
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>emb|CR962137.2| Medicago truncatula chromosome 5 clone mte1-10p15, COMPLETE SEQUENCE
          Length = 111128

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 293   ataatactccctccgatcctaatta 317
             |||||||||||||||||||| ||||
Sbjct: 49256 ataatactccctccgatccttatta 49232
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>gb|AC127169.13| Medicago truncatula clone mth2-36n3, complete sequence
          Length = 124554

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 294   taatactccctccgatcctaa 314
             |||||||||||||||||||||
Sbjct: 65303 taatactccctccgatcctaa 65323
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>gb|AC108075.3| Homo sapiens BAC clone RP11-728C8 from 4, complete sequence
          Length = 167791

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 231    gacatatctggcaaagtaaga 251
              |||||||||||||||||||||
Sbjct: 143518 gacatatctggcaaagtaaga 143498
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 296      atactccctccgatcctaattaattgacg 324
                |||||||||||| |||||| |||||||||
Sbjct: 24760861 atactccctccgttcctaaataattgacg 24760889
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>gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein (ABC1037) gene,
             complete cds
          Length = 25080

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 294   taatactccctccgatcctaa 314
             |||||||||||||||||||||
Sbjct: 22023 taatactccctccgatcctaa 22003
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>gb|AE014133.1| Streptococcus mutans UA159, complete genome
          Length = 2030921

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 270    tccactgaagcaaaccacaaattataata 298
              ||||||||| |||||||||||| ||||||
Sbjct: 887599 tccactgaatcaaaccacaaataataata 887571
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>gb|AY107519.1| Zea mays PCO078033 mRNA sequence
          Length = 1299

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 397  gggtagacctcaaagacacctcgagctcctagtttcttcacaactttatagtc 449
            ||||||||||| | |||||| |||||||| | |||||| ||||| || |||||
Sbjct: 1105 gggtagacctcgatgacaccacgagctccgattttcttgacaaccttgtagtc 1053
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>gb|AC156998.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0086B08, complete sequence
          Length = 148274

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 296   atactccctccgatcctaattaattgacg 324
             |||||||||||| |||||| |||||||||
Sbjct: 87358 atactccctccgttcctaaataattgacg 87386
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>dbj|AP004972.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT41A07, TM0155a,
             complete sequence
          Length = 32123

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 293   ataatactccctccgatccta 313
             |||||||||||||||||||||
Sbjct: 27633 ataatactccctccgatccta 27613
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>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0097K08 map C827S, complete sequence
          Length = 137870

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                         
Query: 391   tctcacgggtagacctcaaagacacctcgagctcctagtttcttcacaactttatagtca 450
             ||||| || |||||||| || ||| |||||||||| || |||||  | |  |||||||||
Sbjct: 45032 tctcatggatagacctcgaacacagctcgagctccgagcttcttggcgatcttatagtca 44973

                     
Query: 451   ctgaatcc 458
             ||||||||
Sbjct: 44972 ctgaatcc 44965
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>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0026P08 map near C827S, complete sequence
          Length = 148676

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                         
Query: 391   tctcacgggtagacctcaaagacacctcgagctcctagtttcttcacaactttatagtca 450
             ||||| || |||||||| || ||| |||||||||| || |||||  | |  |||||||||
Sbjct: 50743 tctcatggatagacctcgaacacagctcgagctccgagcttcttggcgatcttatagtca 50802

                     
Query: 451   ctgaatcc 458
             ||||||||
Sbjct: 50803 ctgaatcc 50810
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>gb|AC101921.8| Mus musculus chromosome 15, clone RP24-176G17, complete sequence
          Length = 166654

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 340    attgtatagagtttgcttca 359
              ||||||||||||||||||||
Sbjct: 112659 attgtatagagtttgcttca 112678
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>gb|AC143341.8| Medicago truncatula clone mth2-7a11, complete sequence
          Length = 111446

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   taatactccctccgatccta 313
             ||||||||||||||||||||
Sbjct: 22570 taatactccctccgatccta 22589
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>gb|AC139526.22| Medicago truncatula clone mth2-9b23, complete sequence
          Length = 141491

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 293   ataatactccctccgatcct 312
             ||||||||||||||||||||
Sbjct: 92417 ataatactccctccgatcct 92436
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>gb|AC148239.7| Medicago truncatula clone mth2-5d7, complete sequence
          Length = 103609

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 294   taatactccctccgatccta 313
             ||||||||||||||||||||
Sbjct: 37434 taatactccctccgatccta 37415
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>gb|AC146865.11| Medicago truncatula clone mth2-36m14, complete sequence
          Length = 128493

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 288   aaattataatactccctccg 307
             ||||||||||||||||||||
Sbjct: 53937 aaattataatactccctccg 53956
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>emb|AL449188.2| Human DNA sequence from clone RP11-460G6 on chromosome Xq21.2-22.2,
           complete sequence
          Length = 64329

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 293 ataatactccctccgatcct 312
           ||||||||||||||||||||
Sbjct: 523 ataatactccctccgatcct 542
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>emb|AL157776.15| Human DNA sequence from clone RP11-68J15 on chromosome 6 Contains part
             of the NUP153 gene for nucleoporin 153kD, complete
             sequence
          Length = 70043

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 328   cctcaggacaatattgtata 347
             ||||||||||||||||||||
Sbjct: 41153 cctcaggacaatattgtata 41134
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>gb|AC164432.3| Mus musculus BAC clone RP23-394G23 from chromosome 8, complete sequence
          Length = 220224

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 41     accacatggtatccacatcaacaaacat 68
              ||||||||||||| |||||||| |||||
Sbjct: 107618 accacatggtatcaacatcaactaacat 107645
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>gb|AC157360.9| Mus musculus chromosome 8, clone RP23-420E22, complete sequence
          Length = 195633

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    agttttacagattggaaagt 161
              ||||||||||||||||||||
Sbjct: 115817 agttttacagattggaaagt 115836
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>emb|AL732397.5| Mouse DNA sequence from clone RP23-469O11 on chromosome 11 Contains the
             5' UTR of a variant of a novel gene, complete sequence
          Length = 78894

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 193   ataacaccccatcttacctt 212
             ||||||||||||||||||||
Sbjct: 52496 ataacaccccatcttacctt 52515
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>emb|AJ841705.1| Isatis tinctoria tsa gene for tryptophan synthase, alpha subunit
           (TSA1), exons 1-8
          Length = 2132

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 240 ggcaaagtaagacaatttcc 259
           ||||||||||||||||||||
Sbjct: 232 ggcaaagtaagacaatttcc 251
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>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence
          Length = 102433

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 296   atactccctccgatcctaattaattgacgcggcctc 331
             |||||||||||||||| | |||||||| || |||||
Sbjct: 69123 atactccctccgatccgagttaattgatgcagcctc 69088
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>gb|AC069540.6| Homo sapiens chromosome 10 clone RP11-344L13, complete sequence
          Length = 201182

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 445   tagtcactgaatcctgcctt 464
             ||||||||||||||||||||
Sbjct: 44024 tagtcactgaatcctgcctt 44005
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>gb|AC011390.3| Homo sapiens chromosome 5 clone CTB-176I15, complete sequence
          Length = 56173

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 150  agattggaaagtaaccaaga 169
            ||||||||||||||||||||
Sbjct: 6805 agattggaaagtaaccaaga 6786
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>gb|AC010235.7| Homo sapiens chromosome 5 clone CTC-339D2, complete sequence
          Length = 228600

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 166   aagagtgcatagcaccccat 185
             ||||||||||||||||||||
Sbjct: 33955 aagagtgcatagcaccccat 33936
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>gb|AC153020.5| Mus musculus BAC clone RP23-88P1 from chromosome 13, complete
            sequence
          Length = 200635

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   acaaacatcacattcaggtt 80
            ||||||||||||||||||||
Sbjct: 8819 acaaacatcacattcaggtt 8800
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>gb|AC154255.2| Mus musculus BAC clone RP24-202K20 from chromosome 13, complete sequence
          Length = 159755

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     acaaacatcacattcaggtt 80
              ||||||||||||||||||||
Sbjct: 145563 acaaacatcacattcaggtt 145544
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>gb|AC094022.3| Homo sapiens chromosome 1 clone RP11-88N11, complete sequence
          Length = 187268

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 348   gagtttgcttcaattaattc 367
             ||||||||||||||||||||
Sbjct: 17385 gagtttgcttcaattaattc 17404
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>gb|DQ267495.1| Uncultured delta proteobacterium DeepAnt-1F12 fosmid, complete sequence
          Length = 38421

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 389   tctctcacgggtagacctca 408
             ||||||||||||||||||||
Sbjct: 34161 tctctcacgggtagacctca 34180
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 291     ttataatactccctccgatc 310
               ||||||||||||||||||||
Sbjct: 2938768 ttataatactccctccgatc 2938749
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>gb|L09217.1|ICTORDA Ictalurus punctatus olfactory receptor 1 mRNA, complete cds
          Length = 1035

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 459 tgccttgatgaatatctcgc 478
           ||||||||||||||||||||
Sbjct: 690 tgccttgatgaatatctcgc 709
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>gb|AC091971.4| Homo sapiens chromosome 5 clone RP11-511F22, complete sequence
          Length = 70759

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   agattggaaagtaaccaaga 169
             ||||||||||||||||||||
Sbjct: 11877 agattggaaagtaaccaaga 11896
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>emb|AJ243213.1|HSA243213 Homo sapiens partial 5-HT4 receptor gene, exons 2 to 5
          Length = 130985

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   agattggaaagtaaccaaga 169
             ||||||||||||||||||||
Sbjct: 42836 agattggaaagtaaccaaga 42855
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>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    aaaagcacaccgagtgcttt 126
              ||||||||||||||||||||
Sbjct: 205055 aaaagcacaccgagtgcttt 205036
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 291     ttataatactccctccgatc 310
               ||||||||||||||||||||
Sbjct: 2938712 ttataatactccctccgatc 2938693
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>emb|AL844498.4|CNS08CAV Oryza sativa chromosome 12, . BAC OSJNBb0059G18 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 145661

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 291   ttataatactccctccgatc 310
             ||||||||||||||||||||
Sbjct: 77334 ttataatactccctccgatc 77353
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>gb|AC134525.5| Mus musculus BAC clone RP24-496F7 from 8, complete sequence
          Length = 215900

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 41     accacatggtatccacatcaacaaacat 68
              ||||||||||||| |||||||| |||||
Sbjct: 211706 accacatggtatcaacatcaactaacat 211733
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>emb|CT030158.4| M.truncatula DNA sequence from clone MTH2-49E10 on chromosome 3,
             complete sequence
          Length = 122591

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 294   taatactccctccgatccta 313
             ||||||||||||||||||||
Sbjct: 92058 taatactccctccgatccta 92039
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>dbj|AP006143.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT16L07, TM0254,
             complete sequence
          Length = 118592

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 294   taatactccctccgatcctaatta 317
             |||||||||||||| |||||||||
Sbjct: 57387 taatactccctccgttcctaatta 57364
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>dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09C23, TM0001,
             complete sequence
          Length = 103397

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 294   taatactccctccgatcctaatta 317
             |||||||||||||| |||||||||
Sbjct: 30933 taatactccctccgttcctaatta 30910
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>emb|AL824707.7| Mouse DNA sequence from clone RP23-95O1 on chromosome 4, complete
              sequence
          Length = 225002

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 434    tcacaactttatagtcactg 453
              ||||||||||||||||||||
Sbjct: 111464 tcacaactttatagtcactg 111445


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,508,950
Number of Sequences: 3902068
Number of extensions: 4508950
Number of successful extensions: 90841
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 90360
Number of HSP's gapped (non-prelim): 482
length of query: 531
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 508
effective length of database: 17,143,297,704
effective search space: 8708795233632
effective search space used: 8708795233632
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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