ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart28g02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT016572.1| Zea mays clone Contig405 mRNA sequence 111 2e-21
2gb|AY110043.1| Zea mays CL5496_1 mRNA sequence 111 2e-21
3ref|XM_474393.1| Oryza sativa (japonica cultivar-group), predic... 94 6e-16
4ref|XM_474324.1| Oryza sativa (japonica cultivar-group), predic... 86 1e-13
5dbj|AK102124.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
6emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4,... 60 8e-06
7dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 60 8e-06
8emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 60 8e-06
9emb|AL732354.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 60 8e-06
10emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4,... 52 0.002
11emb|AL732344.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 52 0.002
12gb|AC135638.5| Mus musculus BAC clone RP23-330K10 from chromosom... 48 0.030
13gb|AC154050.1| Drosophila melanogaster clone BACR22M24, complete... 44 0.46
14gb|AC122864.3| Mus musculus BAC clone RP23-142M19 from 6, comple... 44 0.46
15gb|AC021639.5| Drosophila melanogaster, chromosome X, region 12E... 44 0.46
16emb|BX072530.5| Zebrafish DNA sequence from clone DKEY-221K19, c... 44 0.46
17gb|AE003494.4| Drosophila melanogaster chromosome X, section 46 ... 44 0.46
18gb|AC183677.2| Pan troglodytes BAC clone CH251-520E8 from chromo... 42 1.8
19emb|AL161457.13| Human DNA sequence from clone RP11-88I18 on chr... 42 1.8
20gb|AC183111.3| Pan troglodytes BAC clone CH251-294L3 from chromo... 42 1.8
21gb|AC182393.2| Pan troglodytes BAC clone CH251-503C15 from chrom... 42 1.8
22gb|AC078905.5| Homo sapiens chromosome 15, clone RP11-138H10, co... 42 1.8
23gb|AC018900.8|AC018900 Homo sapiens chromosome 15 clone RP11-198... 42 1.8
24gb|AC092636.3| Homo sapiens BAC clone RP11-353K11 from 2, comple... 42 1.8
25gb|AC007365.3| Homo sapiens BAC clone RP11-451M22 from 2, comple... 42 1.8
26gb|BC040889.1| Homo sapiens, clone IMAGE:5742080, mRNA 42 1.8
27gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 42 1.8
28gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 7.2
29gb|AE006877.1| Sulfolobus solfataricus P2 section 236 of 272 of ... 40 7.2
30ref|NM_026936.1| Mus musculus oxidase assembly 1-like (Oxa1l), mRNA 40 7.2
31emb|CR450770.21| Zebrafish DNA sequence from clone DKEY-161M5 in... 40 7.2
32gb|BC014709.1| Mus musculus solute carrier family 7 (cationic am... 40 7.2
33emb|CR670276.1|CNS0FG5M Tetraodon nigroviridis full-length cDNA 40 7.2
34emb|AL139318.9| Human DNA sequence from clone RP11-124B17 on chr... 40 7.2
35emb|AL035683.9|HS1063B2 Human DNA sequence from clone RP5-1063B2... 40 7.2
36emb|AL845475.12| Mouse DNA sequence from clone RP23-403E20 on ch... 40 7.2
37emb|CR392032.9| Zebrafish DNA sequence from clone DKEYP-64A3 in ... 40 7.2
38gb|AC010501.7| Homo sapiens chromosome 5 clone CTD-2377O17, comp... 40 7.2
39emb|BX927382.9| Zebrafish DNA sequence from clone DKEY-168I13 in... 40 7.2
40dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 40 7.2
41dbj|AK150950.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 7.2
42dbj|AK151718.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 7.2
43dbj|AK152637.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 7.2
44dbj|AK154532.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 7.2
45gb|AC023024.6| Homo sapiens, clone RP11-299G20, complete sequence 40 7.2
46dbj|AK170851.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 7.2
47dbj|AK052432.1| Mus musculus 13 days embryo lung cDNA, RIKEN ful... 40 7.2
48gb|AC013602.4|AC013602 Homo sapiens, clone RP11-10C6, complete s... 40 7.2
49emb|BX901941.5| Mouse DNA sequence from clone RP23-344H22 on chr... 40 7.2
50dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
51emb|AL844855.15| Mouse DNA sequence from clone RP23-113K9 on chr... 40 7.2
52gb|AC145938.4| Pan troglodytes BAC clone RP43-18H20 from chromos... 40 7.2
53gb|AC103736.5| Homo sapiens chromosome 11, clone RP11-703E9, com... 40 7.2
54gb|AC015987.6| Homo sapiens chromosome 7 clone RP11-207O19, comp... 40 7.2
55gb|AC103681.4| Homo sapiens chromosome 11, clone CTD-2560E9, com... 40 7.2
56gb|AC138229.16| Mus musculus chromosome 1, clone RP23-399N18, co... 40 7.2
57gb|AC024083.3|AC024083 Homo sapiens chromosome 7 clone RP11-24I2... 40 7.2
58gb|AC116337.2| Homo sapiens chromosome 5 clone CTD-2503O16, comp... 40 7.2
59emb|BX537274.3| Zebrafish DNA sequence from clone DKEY-103L3 in ... 40 7.2
60dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
61dbj|AP005728.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
62emb|AL808134.17| Mouse DNA sequence from clone RP23-135E1 on chr... 40 7.2
63emb|BX530025.6| Mouse DNA sequence from clone RP23-14E18 on chro... 40 7.2
64ref|NM_011405.1| Mus musculus solute carrier family 7 (cationic ... 40 7.2
65emb|AJ130943.1|MMU130943 Mus musculus mRNA for glycoprotein-asso... 40 7.2
66emb|AJ012754.1|MMU012754 Mus musculus mRNA for glycoprotein-asso... 40 7.2 
>gb|BT016572.1| Zea mays clone Contig405 mRNA sequence
          Length = 1144

 Score =  111 bits (56), Expect = 2e-21
 Identities = 158/192 (82%)
 Strand = Plus / Minus

                                                                       
Query: 341 catcatatgtcggctgagaggaagttatcagacaaggtaaccttctcgcccaacttgaac 400
           ||||||||||| || |  ||||||||  ||||||||| ||||||||||||   |||||| 
Sbjct: 824 catcatatgtcagcagcaaggaagttgccagacaaggaaaccttctcgccaggcttgaat 765

                                                                       
Query: 401 ggtgccaggcctctgtatgggcaggtgctgcatcggaacgcgtcgcccaacccacaactg 460
           ||||  || |||||||| || ||||| |  || ||||| || || |||||||||||||||
Sbjct: 764 ggtggaagacctctgtagggacaggttccacagcggaaggcatcacccaacccacaactg 705

                                                                       
Query: 461 ccacaagctgacacagggttatcgatctgttctgcagtcagccccagcttctccaccttc 520
           ||||||||||||  |||||||| |||||| || ||||| ||| |||||||| | ||||||
Sbjct: 704 ccacaagctgactgagggttattgatctgctccgcagtgagctccagcttcccaaccttc 645

                       
Query: 521 tgctcagcctca 532
           | ||| ||||||
Sbjct: 644 tcctcggcctca 633
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>gb|AY110043.1| Zea mays CL5496_1 mRNA sequence
          Length = 1258

 Score =  111 bits (56), Expect = 2e-21
 Identities = 158/192 (82%)
 Strand = Plus / Minus

                                                                       
Query: 341 catcatatgtcggctgagaggaagttatcagacaaggtaaccttctcgcccaacttgaac 400
           ||||||||||| || |  ||||||||  ||||||||| ||||||||||||   |||||| 
Sbjct: 863 catcatatgtcagcagcaaggaagttgccagacaaggaaaccttctcgccaggcttgaat 804

                                                                       
Query: 401 ggtgccaggcctctgtatgggcaggtgctgcatcggaacgcgtcgcccaacccacaactg 460
           ||||  || |||||||| || ||||| |  || ||||| || || |||||||||||||||
Sbjct: 803 ggtggaagacctctgtagggacaggttccacagcggaaggcatcacccaacccacaactg 744

                                                                       
Query: 461 ccacaagctgacacagggttatcgatctgttctgcagtcagccccagcttctccaccttc 520
           ||||||||||||  |||||||| |||||| || ||||| ||| |||||||| | ||||||
Sbjct: 743 ccacaagctgactgagggttattgatctgctccgcagtgagctccagcttcccaaccttc 684

                       
Query: 521 tgctcagcctca 532
           | ||| ||||||
Sbjct: 683 tcctcggcctca 672
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>ref|XM_474393.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 795

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 104/123 (84%)
 Strand = Plus / Minus

                                                                       
Query: 410 cctctgtatgggcaggtgctgcatcggaacgcgtcgcccaacccacaactgccacaagct 469
           |||||||||||||| || |  ||||| || || ||||||||||||||| |||||||||||
Sbjct: 728 cctctgtatgggcaagtaccacatcgaaatgcatcgcccaacccacaattgccacaagct 669

                                                                       
Query: 470 gacacagggttatcgatctgttctgcagtcagccccagcttctccaccttctgctcagcc 529
           |||  |||||||| |||||||||||  || ||    |||||||||||||||| |||||||
Sbjct: 668 gactgagggttattgatctgttctgatgtgagatttagcttctccaccttctcctcagcc 609

              
Query: 530 tca 532
           |||
Sbjct: 608 tca 606
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>ref|XM_474324.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 798

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 103/123 (83%)
 Strand = Plus / Minus

                                                                       
Query: 410 cctctgtatgggcaggtgctgcatcggaacgcgtcgcccaacccacaactgccacaagct 469
           |||||||||||||| || |  ||||| || || ||||||||||||||| |||||||||| 
Sbjct: 731 cctctgtatgggcaagtaccacatcgaaatgcatcgcccaacccacaattgccacaagcg 672

                                                                       
Query: 470 gacacagggttatcgatctgttctgcagtcagccccagcttctccaccttctgctcagcc 529
           |||  |||||||| |||||||||||  || ||    |||||||||||||||| |||||||
Sbjct: 671 gactgagggttattgatctgttctgatgtgagatttagcttctccaccttctcctcagcc 612

              
Query: 530 tca 532
           |||
Sbjct: 611 tca 609
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>dbj|AK102124.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084O13, full
           insert sequence
          Length = 1379

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 103/123 (83%)
 Strand = Plus / Minus

                                                                       
Query: 410 cctctgtatgggcaggtgctgcatcggaacgcgtcgcccaacccacaactgccacaagct 469
           |||||||||||||| || |  ||||| || || ||||||||||||||| |||||||||| 
Sbjct: 810 cctctgtatgggcaagtaccacatcgaaatgcatcgcccaacccacaattgccacaagcg 751

                                                                       
Query: 470 gacacagggttatcgatctgttctgcagtcagccccagcttctccaccttctgctcagcc 529
           |||  |||||||| |||||||||||  || ||    |||||||||||||||| |||||||
Sbjct: 750 gactgagggttattgatctgttctgatgtgagatttagcttctccaccttctcctcagcc 691

              
Query: 530 tca 532
           |||
Sbjct: 690 tca 688
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>emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032F06,
             complete sequence
          Length = 148023

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                         
Query: 459   tgccacaagctgacacagggttatcgatctgttctgcagtcagccccagcttctccacct 518
             ||||||||||||||  |||||||| |||||||||||  || ||    |||||||||||||
Sbjct: 62572 tgccacaagctgactgagggttattgatctgttctgatgtgagatttagcttctccacct 62631

                           
Query: 519   tctgctcagcctca 532
             ||| ||||||||||
Sbjct: 62632 tctcctcagcctca 62645



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                         
Query: 380   accttctcgcccaacttgaacggtgccaggcctctgtatgggcaggtgctgcatcggaac 439
             ||||||||||||  |||||| | ||  || |||||||||||||| || |  ||||| || 
Sbjct: 62352 accttctcgcccggcttgaatgctggtagacctctgtatgggcaagtaccacatcgaaat 62411

                              
Query: 440   gcgtcgcccaacccaca 456
             || ||||||||||||||
Sbjct: 62412 gcatcgcccaacccaca 62428
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                            
Query: 459      tgccacaagctgacacagggttatcgatctgttctgcagtcagccccagcttctccacct 518
                ||||||||||||||  |||||||| |||||||||||  || ||    |||||||||||||
Sbjct: 34856459 tgccacaagctgactgagggttattgatctgttctgatgtgagatttagcttctccacct 34856518

                              
Query: 519      tctgctcagcctca 532
                ||| ||||||||||
Sbjct: 34856519 tctcctcagcctca 34856532



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                            
Query: 459      tgccacaagctgacacagggttatcgatctgttctgcagtcagccccagcttctccacct 518
                |||||||||| |||  |||||||| |||||||||||  || ||    |||||||||||||
Sbjct: 34460549 tgccacaagcggactgagggttattgatctgttctgatgtgagatttagcttctccacct 34460490

                              
Query: 519      tctgctcagcctca 532
                ||| ||||||||||
Sbjct: 34460489 tctcctcagcctca 34460476



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                            
Query: 380      accttctcgcccaacttgaacggtgccaggcctctgtatgggcaggtgctgcatcggaac 439
                ||||||||||||  |||||| | ||  || |||||||||||||| || |  ||||| || 
Sbjct: 34856239 accttctcgcccggcttgaatgctggtagacctctgtatgggcaagtaccacatcgaaat 34856298

                                 
Query: 440      gcgtcgcccaacccaca 456
                || ||||||||||||||
Sbjct: 34856299 gcatcgcccaacccaca 34856315
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>emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124B04, complete
             sequence
          Length = 115564

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                         
Query: 459   tgccacaagctgacacagggttatcgatctgttctgcagtcagccccagcttctccacct 518
             ||||||||||||||  |||||||| |||||||||||  || ||    |||||||||||||
Sbjct: 36105 tgccacaagctgactgagggttattgatctgttctgatgtgagatttagcttctccacct 36164

                           
Query: 519   tctgctcagcctca 532
             ||| ||||||||||
Sbjct: 36165 tctcctcagcctca 36178



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                         
Query: 380   accttctcgcccaacttgaacggtgccaggcctctgtatgggcaggtgctgcatcggaac 439
             ||||||||||||  |||||| | ||  || |||||||||||||| || |  ||||| || 
Sbjct: 35885 accttctcgcccggcttgaatgctggtagacctctgtatgggcaagtaccacatcgaaat 35944

                              
Query: 440   gcgtcgcccaacccaca 456
             || ||||||||||||||
Sbjct: 35945 gcatcgcccaacccaca 35961
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>emb|AL732354.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0901F07, complete
              sequence
          Length = 110682

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                          
Query: 459    tgccacaagctgacacagggttatcgatctgttctgcagtcagccccagcttctccacct 518
              ||||||||||||||  |||||||| |||||||||||  || ||    |||||||||||||
Sbjct: 110181 tgccacaagctgactgagggttattgatctgttctgatgtgagatttagcttctccacct 110240

                            
Query: 519    tctgctcagcctca 532
              ||| ||||||||||
Sbjct: 110241 tctcctcagcctca 110254



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                          
Query: 380    accttctcgcccaacttgaacggtgccaggcctctgtatgggcaggtgctgcatcggaac 439
              ||||||||||||  |||||| | ||  || |||||||||||||| || |  ||||| || 
Sbjct: 109961 accttctcgcccggcttgaatgctggtagacctctgtatgggcaagtaccacatcgaaat 110020

                               
Query: 440    gcgtcgcccaacccaca 456
              || ||||||||||||||
Sbjct: 110021 gcatcgcccaacccaca 110037
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>emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05,
             complete sequence
          Length = 164943

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                         
Query: 459   tgccacaagctgacacagggttatcgatctgttctgcagtcagccccagcttctccacct 518
             |||||||||| |||  |||||||| |||||||||||  || ||    |||||||||||||
Sbjct: 78034 tgccacaagcggactgagggttattgatctgttctgatgtgagatttagcttctccacct 77975

                           
Query: 519   tctgctcagcctca 532
             ||| ||||||||||
Sbjct: 77974 tctcctcagcctca 77961
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>emb|AL732344.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0403D02, complete
             sequence
          Length = 138387

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                         
Query: 459   tgccacaagctgacacagggttatcgatctgttctgcagtcagccccagcttctccacct 518
             |||||||||| |||  |||||||| |||||||||||  || ||    |||||||||||||
Sbjct: 81857 tgccacaagcggactgagggttattgatctgttctgatgtgagatttagcttctccacct 81798

                           
Query: 519   tctgctcagcctca 532
             ||| ||||||||||
Sbjct: 81797 tctcctcagcctca 81784
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>gb|AC135638.5| Mus musculus BAC clone RP23-330K10 from chromosome 18, complete sequence
          Length = 184588

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 16     cagattggagcaaagaaaaagaaacatg 43
              |||||||||| |||||||||||||||||
Sbjct: 107120 cagattggagaaaagaaaaagaaacatg 107147
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>gb|AC154050.1| Drosophila melanogaster clone BACR22M24, complete sequence
          Length = 161653

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 82     cagtcaaattacatgcacgtaa 103
              ||||||||||||||||||||||
Sbjct: 120776 cagtcaaattacatgcacgtaa 120755
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>gb|AC122864.3| Mus musculus BAC clone RP23-142M19 from 6, complete sequence
          Length = 210148

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 22     ggagcaaagaaaaagaaacatg 43
              ||||||||||||||||||||||
Sbjct: 128094 ggagcaaagaaaaagaaacatg 128115
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>gb|AC021639.5| Drosophila melanogaster, chromosome X, region 12E-12E, BAC clone
              BACR02C24, complete sequence
          Length = 234783

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 82     cagtcaaattacatgcacgtaa 103
              ||||||||||||||||||||||
Sbjct: 114262 cagtcaaattacatgcacgtaa 114283
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>emb|BX072530.5| Zebrafish DNA sequence from clone DKEY-221K19, complete sequence
          Length = 167009

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 270    tacatagatatcttcctaaaga 291
              ||||||||||||||||||||||
Sbjct: 157345 tacatagatatcttcctaaaga 157324
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>gb|AE003494.4| Drosophila melanogaster chromosome X, section 46 of 74 of the complete
              sequence
          Length = 310498

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 82     cagtcaaattacatgcacgtaa 103
              ||||||||||||||||||||||
Sbjct: 219441 cagtcaaattacatgcacgtaa 219420
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>gb|AC183677.2| Pan troglodytes BAC clone CH251-520E8 from chromosome 9, complete
             sequence
          Length = 174731

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 19    attggagcaaagaaaaagaaa 39
             |||||||||||||||||||||
Sbjct: 32815 attggagcaaagaaaaagaaa 32795
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>emb|AL161457.13| Human DNA sequence from clone RP11-88I18 on chromosome 9 Contains part
             of the PGM5 gene for phosphoglucomutase 5 and 2 novel
             genes, complete sequence
          Length = 124388

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 19    attggagcaaagaaaaagaaa 39
             |||||||||||||||||||||
Sbjct: 56427 attggagcaaagaaaaagaaa 56447
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>gb|AC183111.3| Pan troglodytes BAC clone CH251-294L3 from chromosome 9, complete
            sequence
          Length = 150130

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 19   attggagcaaagaaaaagaaa 39
            |||||||||||||||||||||
Sbjct: 8209 attggagcaaagaaaaagaaa 8189
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>gb|AC182393.2| Pan troglodytes BAC clone CH251-503C15 from chromosome 9, complete
              sequence
          Length = 230693

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 19     attggagcaaagaaaaagaaa 39
              |||||||||||||||||||||
Sbjct: 147197 attggagcaaagaaaaagaaa 147217
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>gb|AC078905.5| Homo sapiens chromosome 15, clone RP11-138H10, complete sequence
          Length = 169102

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 27    aaagaaaaagaaacatgtagcaaaacaaa 55
             ||||||||||||||| | |||||||||||
Sbjct: 59333 aaagaaaaagaaacaggaagcaaaacaaa 59305
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>gb|AC018900.8|AC018900 Homo sapiens chromosome 15 clone RP11-198M11 map 15q21.1, complete
             sequence
          Length = 177657

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 22    ggagcaaagaaaaagaaacat 42
             |||||||||||||||||||||
Sbjct: 77850 ggagcaaagaaaaagaaacat 77870
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>gb|AC092636.3| Homo sapiens BAC clone RP11-353K11 from 2, complete sequence
          Length = 199721

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 21    tggagcaaagaaaaagaaaca 41
             |||||||||||||||||||||
Sbjct: 32895 tggagcaaagaaaaagaaaca 32875
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>gb|AC007365.3| Homo sapiens BAC clone RP11-451M22 from 2, complete sequence
          Length = 184285

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 502    ccccagcttctccaccttctg 522
              |||||||||||||||||||||
Sbjct: 116034 ccccagcttctccaccttctg 116054
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>gb|BC040889.1| Homo sapiens, clone IMAGE:5742080, mRNA
          Length = 1561

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 11   taaaccagattggagcaaagaaaaa 35
            ||||||||||||||||||| |||||
Sbjct: 1503 taaaccagattggagcaaaaaaaaa 1527
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 502     ccccagcttctccaccttctg 522
               |||||||||||||||||||||
Sbjct: 2343757 ccccagcttctccaccttctg 2343737
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 498     tcagccccagcttctccacc 517
               ||||||||||||||||||||
Sbjct: 2239381 tcagccccagcttctccacc 2239400
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>gb|AE006877.1| Sulfolobus solfataricus P2 section 236 of 272 of the complete genome
          Length = 13959

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 413  ctgtatgggcaggtgctgca 432
            ||||||||||||||||||||
Sbjct: 9895 ctgtatgggcaggtgctgca 9876
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>ref|NM_026936.1| Mus musculus oxidase assembly 1-like (Oxa1l), mRNA
          Length = 2535

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 36   gaaacatgtagcaaaacaaa 55
            ||||||||||||||||||||
Sbjct: 2496 gaaacatgtagcaaaacaaa 2515
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>emb|CR450770.21| Zebrafish DNA sequence from clone DKEY-161M5 in linkage group 8,
             complete sequence
          Length = 153753

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 59    tttccatcatactgtatgtttcac 82
             |||||| |||||||||||||||||
Sbjct: 81836 tttccagcatactgtatgtttcac 81813
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>gb|BC014709.1| Mus musculus solute carrier family 7 (cationic amino acid
            transporter, y+ system), member 7, mRNA (cDNA clone
            MGC:25257 IMAGE:4482816), complete cds
          Length = 2168

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 36   gaaacatgtagcaaaacaaa 55
            ||||||||||||||||||||
Sbjct: 1944 gaaacatgtagcaaaacaaa 1925
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>emb|CR670276.1|CNS0FG5M Tetraodon nigroviridis full-length cDNA
          Length = 1443

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 20   ttggagcaaagaaaaagaaa 39
            ||||||||||||||||||||
Sbjct: 1178 ttggagcaaagaaaaagaaa 1197
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>emb|AL139318.9| Human DNA sequence from clone RP11-124B17 on chromosome 13 Contains
           the DCT gene for dopachrome tautomerase (dopachrome
           delta-isomerase, tyrosine-related protein 2) (TYRP2),
           the 3' end of the gene for dTDP-D-glucose
           4,6-dehydratase (TDPGD) and a CpG island, complete
           sequence
          Length = 160004

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 20  ttggagcaaagaaaaagaaa 39
           ||||||||||||||||||||
Sbjct: 132 ttggagcaaagaaaaagaaa 113
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>emb|AL035683.9|HS1063B2 Human DNA sequence from clone RP5-1063B2 on chromosome 20q13.1-13.2
             Contains the 3' end of the B4GALT5 gene for
             UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase
             polypeptide 5, complete sequence
          Length = 114596

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    tagcaaaacaaagtctttcc 63
             ||||||||||||||||||||
Sbjct: 80496 tagcaaaacaaagtctttcc 80515
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>emb|AL845475.12| Mouse DNA sequence from clone RP23-403E20 on chromosome 11 Contains a
             novel pseudogene (similar to RIKEN cDNA 4833439L19 gene)
             and a ribosomal protein L26 (Rpl26) pseudogene, complete
             sequence
          Length = 147170

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    agcaaaacaaagtctttcca 64
             ||||||||||||||||||||
Sbjct: 51152 agcaaaacaaagtctttcca 51171
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>emb|CR392032.9| Zebrafish DNA sequence from clone DKEYP-64A3 in linkage group 2,
            complete sequence
          Length = 191649

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 60   ttccatcatactgtatgtttcaca 83
            ||||| ||||||||||||||||||
Sbjct: 8239 ttccagcatactgtatgtttcaca 8216
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>gb|AC010501.7| Homo sapiens chromosome 5 clone CTD-2377O17, complete sequence
          Length = 61738

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 503   cccagcttctccaccttctg 522
             ||||||||||||||||||||
Sbjct: 56039 cccagcttctccaccttctg 56020
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>emb|BX927382.9| Zebrafish DNA sequence from clone DKEY-168I13 in linkage group 2,
             complete sequence
          Length = 57395

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 60    ttccatcatactgtatgtttcaca 83
             ||||| ||||||||||||||||||
Sbjct: 49385 ttccagcatactgtatgtttcaca 49408
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>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113
          Length = 1841713

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 505     cagcttctccaccttctgct 524
               ||||||||||||||||||||
Sbjct: 1127727 cagcttctccaccttctgct 1127746
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>dbj|AK150950.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830018K11 product:solute carrier family 7
            (cationic amino acid transporter, y+ system), member 7,
            full insert sequence
          Length = 2281

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 36   gaaacatgtagcaaaacaaa 55
            ||||||||||||||||||||
Sbjct: 2095 gaaacatgtagcaaaacaaa 2076
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>dbj|AK151718.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830035D10 product:solute carrier family 7
            (cationic amino acid transporter, y+ system), member 7,
            full insert sequence
          Length = 2281

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 36   gaaacatgtagcaaaacaaa 55
            ||||||||||||||||||||
Sbjct: 2095 gaaacatgtagcaaaacaaa 2076
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>dbj|AK152637.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830081J23 product:solute carrier family 7
            (cationic amino acid transporter, y+ system), member 7,
            full insert sequence
          Length = 2047

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 36   gaaacatgtagcaaaacaaa 55
            ||||||||||||||||||||
Sbjct: 1861 gaaacatgtagcaaaacaaa 1842
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>dbj|AK154532.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630044K09
            product:oxidase assembly 1-like, full insert sequence
          Length = 2533

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 36   gaaacatgtagcaaaacaaa 55
            ||||||||||||||||||||
Sbjct: 2496 gaaacatgtagcaaaacaaa 2515
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>gb|AC023024.6| Homo sapiens, clone RP11-299G20, complete sequence
          Length = 183671

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     aaagaaaaagaaacatgtag 46
              ||||||||||||||||||||
Sbjct: 100304 aaagaaaaagaaacatgtag 100323
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>dbj|AK170851.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630204K11
            product:solute carrier family 7 (cationic amino acid
            transporter, y+ system), member 7, full insert sequence
          Length = 2053

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 36   gaaacatgtagcaaaacaaa 55
            ||||||||||||||||||||
Sbjct: 1867 gaaacatgtagcaaaacaaa 1848
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>dbj|AK052432.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched
            library, clone:D430020C02 product:similar to CYTOCHROME
            OXIDASE BIOGENESIS PROTEIN OXA1, MITOCHONDRIAL PRECURSOR
            (OXA1-LIKE PROTEIN) (OXA1HS) [Homo sapiens], full insert
            sequence
          Length = 2535

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 36   gaaacatgtagcaaaacaaa 55
            ||||||||||||||||||||
Sbjct: 2496 gaaacatgtagcaaaacaaa 2515
to top
>gb|AC013602.4|AC013602 Homo sapiens, clone RP11-10C6, complete sequence
          Length = 152770

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    aaagaaaaagaaacatgtag 46
             ||||||||||||||||||||
Sbjct: 54949 aaagaaaaagaaacatgtag 54930
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>emb|BX901941.5| Mouse DNA sequence from clone RP23-344H22 on chromosome X, complete
             sequence
          Length = 138091

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    aaaaagaaacatgtagcaaa 50
             ||||||||||||||||||||
Sbjct: 90291 aaaaagaaacatgtagcaaa 90310
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 498      tcagccccagcttctccaccttct 521
                ||||||||| ||||||||||||||
Sbjct: 13206992 tcagccccaccttctccaccttct 13206969
to top
>emb|AL844855.15| Mouse DNA sequence from clone RP23-113K9 on chromosome 2, complete
              sequence
          Length = 221545

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     ggagcaaagaaaaagaaaca 41
              ||||||||||||||||||||
Sbjct: 141029 ggagcaaagaaaaagaaaca 141010
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>gb|AC145938.4| Pan troglodytes BAC clone RP43-18H20 from chromosome 7, complete sequence
          Length = 178210

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     tttccatcatactgtatgtt 78
              ||||||||||||||||||||
Sbjct: 113475 tttccatcatactgtatgtt 113456
to top
>gb|AC103736.5| Homo sapiens chromosome 11, clone RP11-703E9, complete sequence
          Length = 147226

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    aaagaaaaagaaacatgtag 46
             ||||||||||||||||||||
Sbjct: 19653 aaagaaaaagaaacatgtag 19672
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>gb|AC015987.6| Homo sapiens chromosome 7 clone RP11-207O19, complete sequence
          Length = 181882

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     tttccatcatactgtatgtt 78
              ||||||||||||||||||||
Sbjct: 145778 tttccatcatactgtatgtt 145759
to top
>gb|AC103681.4| Homo sapiens chromosome 11, clone CTD-2560E9, complete sequence
          Length = 215485

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    aaagaaaaagaaacatgtag 46
             ||||||||||||||||||||
Sbjct: 42401 aaagaaaaagaaacatgtag 42382
to top
>gb|AC138229.16| Mus musculus chromosome 1, clone RP23-399N18, complete sequence
          Length = 211732

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 358   gaggaagttatcagacaagg 377
             ||||||||||||||||||||
Sbjct: 85253 gaggaagttatcagacaagg 85272
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>gb|AC024083.3|AC024083 Homo sapiens chromosome 7 clone RP11-24I23, complete sequence
          Length = 152283

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    tttccatcatactgtatgtt 78
             ||||||||||||||||||||
Sbjct: 47459 tttccatcatactgtatgtt 47440
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>gb|AC116337.2| Homo sapiens chromosome 5 clone CTD-2503O16, complete sequence
          Length = 122363

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 503    cccagcttctccaccttctg 522
              ||||||||||||||||||||
Sbjct: 103393 cccagcttctccaccttctg 103412
to top
>emb|BX537274.3| Zebrafish DNA sequence from clone DKEY-103L3 in linkage group 13,
              complete sequence
          Length = 151298

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     agcaaaacaaagtctttcca 64
              ||||||||||||||||||||
Sbjct: 121816 agcaaaacaaagtctttcca 121835
to top
>dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0055N01
          Length = 154783

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 498   tcagccccagcttctccaccttct 521
             ||||||||| ||||||||||||||
Sbjct: 28426 tcagccccaccttctccaccttct 28403
to top
>dbj|AP005728.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0048A13
          Length = 137680

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 498    tcagccccagcttctccaccttct 521
              ||||||||| ||||||||||||||
Sbjct: 129082 tcagccccaccttctccaccttct 129059
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>emb|AL808134.17| Mouse DNA sequence from clone RP23-135E1 on chromosome X, complete
              sequence
          Length = 195763

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     aaaaagaaacatgtagcaaa 50
              ||||||||||||||||||||
Sbjct: 147963 aaaaagaaacatgtagcaaa 147982
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>emb|BX530025.6| Mouse DNA sequence from clone RP23-14E18 on chromosome X, complete
             sequence
          Length = 104719

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    aaaaagaaacatgtagcaaa 50
             ||||||||||||||||||||
Sbjct: 89462 aaaaagaaacatgtagcaaa 89443
to top
>ref|NM_011405.1| Mus musculus solute carrier family 7 (cationic amino acid
            transporter, y+ system), member 7 (Slc7a7), mRNA
          Length = 2144

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 36   gaaacatgtagcaaaacaaa 55
            ||||||||||||||||||||
Sbjct: 1938 gaaacatgtagcaaaacaaa 1919
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>emb|AJ130943.1|MMU130943 Mus musculus mRNA for glycoprotein-associated amino acid transporter
            y+LAT1b
          Length = 2144

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 36   gaaacatgtagcaaaacaaa 55
            ||||||||||||||||||||
Sbjct: 1938 gaaacatgtagcaaaacaaa 1919
to top
>emb|AJ012754.1|MMU012754 Mus musculus mRNA for glycoprotein-associated amino acid transporter
            y+LAT1a
          Length = 2158

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 36   gaaacatgtagcaaaacaaa 55
            ||||||||||||||||||||
Sbjct: 1946 gaaacatgtagcaaaacaaa 1927


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,990,850
Number of Sequences: 3902068
Number of extensions: 4990850
Number of successful extensions: 103809
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103581
Number of HSP's gapped (non-prelim): 228
length of query: 532
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 509
effective length of database: 17,143,297,704
effective search space: 8725938531336
effective search space used: 8725938531336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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