Clone Name | rbart28g01 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 184 bits (93), Expect = 2e-43 Identities = 174/201 (86%) Strand = Plus / Minus Query: 311 cggccgccgcgaagagcaggctctccactgcctcgtctgcaagctgggcctcgcctccga 370 |||||||||||| |||||||| ||||||||||||| ||||||||||||||||||| ||| Sbjct: 5934156 cggccgccgcgaggagcaggccctccactgcctcgcctgcaagctgggcctcgccggcga 5934097 Query: 371 cgtcgtgctagcgaccgccttgctcgcccgctacggcaagcgcggcctcctgtctcccgc 430 | ||||| || ||||| ||||| ||||||||| || ||||||||||||| |||||| Sbjct: 5934096 tgcggtgctggccaccgcactgctcacccgctacgccaggcgcggcctcctggatcccgc 5934037 Query: 431 ccagaggctgttcgacgaaatgccgcgccgggacccggtcgccttcaacgccatgcttgc 490 || ||||||||||||||||||||| ||| |||| ||||||| |||||||||||||| || Sbjct: 5934036 ccggaggctgttcgacgaaatgcctcgcagggatgcggtcgcgttcaacgccatgctggc 5933977 Query: 491 cgcgctcggcgcctccgggag 511 |||||||| ||| ||| |||| Sbjct: 5933976 cgcgctcgtcgcgtcccggag 5933956
>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0024N18 Length = 128739 Score = 184 bits (93), Expect = 2e-43 Identities = 174/201 (86%) Strand = Plus / Minus Query: 311 cggccgccgcgaagagcaggctctccactgcctcgtctgcaagctgggcctcgcctccga 370 |||||||||||| |||||||| ||||||||||||| ||||||||||||||||||| ||| Sbjct: 55808 cggccgccgcgaggagcaggccctccactgcctcgcctgcaagctgggcctcgccggcga 55749 Query: 371 cgtcgtgctagcgaccgccttgctcgcccgctacggcaagcgcggcctcctgtctcccgc 430 | ||||| || ||||| ||||| ||||||||| || ||||||||||||| |||||| Sbjct: 55748 tgcggtgctggccaccgcactgctcacccgctacgccaggcgcggcctcctggatcccgc 55689 Query: 431 ccagaggctgttcgacgaaatgccgcgccgggacccggtcgccttcaacgccatgcttgc 490 || ||||||||||||||||||||| ||| |||| ||||||| |||||||||||||| || Sbjct: 55688 ccggaggctgttcgacgaaatgcctcgcagggatgcggtcgcgttcaacgccatgctggc 55629 Query: 491 cgcgctcggcgcctccgggag 511 |||||||| ||| ||| |||| Sbjct: 55628 cgcgctcgtcgcgtcccggag 55608
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0537F07 Length = 147724 Score = 184 bits (93), Expect = 2e-43 Identities = 174/201 (86%) Strand = Plus / Minus Query: 311 cggccgccgcgaagagcaggctctccactgcctcgtctgcaagctgggcctcgcctccga 370 |||||||||||| |||||||| ||||||||||||| ||||||||||||||||||| ||| Sbjct: 134931 cggccgccgcgaggagcaggccctccactgcctcgcctgcaagctgggcctcgccggcga 134872 Query: 371 cgtcgtgctagcgaccgccttgctcgcccgctacggcaagcgcggcctcctgtctcccgc 430 | ||||| || ||||| ||||| ||||||||| || ||||||||||||| |||||| Sbjct: 134871 tgcggtgctggccaccgcactgctcacccgctacgccaggcgcggcctcctggatcccgc 134812 Query: 431 ccagaggctgttcgacgaaatgccgcgccgggacccggtcgccttcaacgccatgcttgc 490 || ||||||||||||||||||||| ||| |||| ||||||| |||||||||||||| || Sbjct: 134811 ccggaggctgttcgacgaaatgcctcgcagggatgcggtcgcgttcaacgccatgctggc 134752 Query: 491 cgcgctcggcgcctccgggag 511 |||||||| ||| ||| |||| Sbjct: 134751 cgcgctcgtcgcgtcccggag 134731
>dbj|AK101267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032L21, full insert sequence Length = 1970 Score = 184 bits (93), Expect = 2e-43 Identities = 174/201 (86%) Strand = Plus / Plus Query: 311 cggccgccgcgaagagcaggctctccactgcctcgtctgcaagctgggcctcgcctccga 370 |||||||||||| |||||||| ||||||||||||| ||||||||||||||||||| ||| Sbjct: 326 cggccgccgcgaggagcaggccctccactgcctcgcctgcaagctgggcctcgccggcga 385 Query: 371 cgtcgtgctagcgaccgccttgctcgcccgctacggcaagcgcggcctcctgtctcccgc 430 | ||||| || ||||| ||||| ||||||||| || ||||||||||||| |||||| Sbjct: 386 tgcggtgctggccaccgcactgctcacccgctacgccaggcgcggcctcctggatcccgc 445 Query: 431 ccagaggctgttcgacgaaatgccgcgccgggacccggtcgccttcaacgccatgcttgc 490 || ||||||||||||||||||||| ||| |||| ||||||| |||||||||||||| || Sbjct: 446 ccggaggctgttcgacgaaatgcctcgcagggatgcggtcgcgttcaacgccatgctggc 505 Query: 491 cgcgctcggcgcctccgggag 511 |||||||| ||| ||| |||| Sbjct: 506 cgcgctcgtcgcgtcccggag 526
>ref|XM_463547.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1554 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 439 tgttcgacgaaatgccgcgccgggac 464 |||||||||||||||||||||||||| Sbjct: 299 tgttcgacgaaatgccgcgccgggac 324
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 439 tgttcgacgaaatgccgcgccgggac 464 |||||||||||||||||||||||||| Sbjct: 38429078 tgttcgacgaaatgccgcgccgggac 38429103 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gaggctgttcgacgaaatgc 453 |||||||||||||||||||| Sbjct: 29775241 gaggctgttcgacgaaatgc 29775260 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 aggctgttcgacgaaatgcc 454 |||||||||||||||||||| Sbjct: 24240651 aggctgttcgacgaaatgcc 24240632 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 tgctgccgcgcggccgcgccgccg 285 ||||||||||| |||||||||||| Sbjct: 20188492 tgctgccgcgccgccgcgccgccg 20188469
>gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa0048I01, complete sequence Length = 193444 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 439 tgttcgacgaaatgccgcgccgggac 464 |||||||||||||||||||||||||| Sbjct: 22177 tgttcgacgaaatgccgcgccgggac 22202
>dbj|AP003379.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408G07 Length = 126631 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 439 tgttcgacgaaatgccgcgccgggac 464 |||||||||||||||||||||||||| Sbjct: 14493 tgttcgacgaaatgccgcgccgggac 14518
>ref|XM_472585.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2154 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 437 gctgttcgacgaaatgccgcgccggga 463 ||||||||||| ||||||||||||||| Sbjct: 324 gctgttcgacgcaatgccgcgccggga 350
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 437 gctgttcgacgaaatgccgcgccggga 463 ||||||||||| ||||||||||||||| Sbjct: 21736211 gctgttcgacgcaatgccgcgccggga 21736185 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 gaggctgttcgacgaaatgcc 454 ||||||||||||||||||||| Sbjct: 23132661 gaggctgttcgacgaaatgcc 23132641 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 aggctgttcgacgaaatgcc 454 |||||||||||||||||||| Sbjct: 606481 aggctgttcgacgaaatgcc 606462
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 439 tgttcgacgaaatgccgcgccgg 461 ||||||||||||||||||||||| Sbjct: 14612112 tgttcgacgaaatgccgcgccgg 14612134
>dbj|AP005093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1294_G06 Length = 115468 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 439 tgttcgacgaaatgccgcgccgg 461 ||||||||||||||||||||||| Sbjct: 110401 tgttcgacgaaatgccgcgccgg 110423
>dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0643D11 Length = 137525 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 439 tgttcgacgaaatgccgcgccgg 461 ||||||||||||||||||||||| Sbjct: 33779 tgttcgacgaaatgccgcgccgg 33801
>dbj|AK102867.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111M02, full insert sequence Length = 1537 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 439 tgttcgacgaaatgccgcgccgg 461 ||||||||||||||||||||||| Sbjct: 511 tgttcgacgaaatgccgcgccgg 533
>dbj|AK102254.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088H22, full insert sequence Length = 1544 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 439 tgttcgacgaaatgccgcgccgg 461 ||||||||||||||||||||||| Sbjct: 518 tgttcgacgaaatgccgcgccgg 540
>dbj|AK101115.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025G14, full insert sequence Length = 2823 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 437 gctgttcgacgaaatgccgcgccggga 463 ||||||||||| ||||||||||||||| Sbjct: 363 gctgttcgacgcaatgccgcgccggga 389
>emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006B20, complete sequence Length = 141915 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 437 gctgttcgacgaaatgccgcgccggga 463 ||||||||||| ||||||||||||||| Sbjct: 47828 gctgttcgacgcaatgccgcgccggga 47802
>ref|XM_465556.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3324 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 438 ctgttcgacgaaatgccgcgcc 459 |||||||||||||||||||||| Sbjct: 401 ctgttcgacgaaatgccgcgcc 422
>ref|XM_475075.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1986 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 439 tgttcgacgaaatgccgcgccgggac 464 ||||||||| |||||||||||||||| Sbjct: 239 tgttcgacggaatgccgcgccgggac 264
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 439 tgttcgacgaaatgccgcgccgggac 464 |||| ||||||||||||||||||||| Sbjct: 3319494 tgtttgacgaaatgccgcgccgggac 3319519 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 aggctgttcgacgaaatgccg 455 ||||||||||||||||||||| Sbjct: 6088160 aggctgttcgacgaaatgccg 6088140 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 aggctgttcgacgaaatgcc 454 |||||||||||||||||||| Sbjct: 18168434 aggctgttcgacgaaatgcc 18168453 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 aggctgttcgacgaaatgcc 454 |||||||||||||||||||| Sbjct: 11386357 aggctgttcgacgaaatgcc 11386376
>gb|AC154644.2| Mus musculus BAC clone RP23-278G20 from chromosome 14, complete sequence Length = 175685 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 245 gatgcagcagcccaggatgctg 266 |||||||||||||||||||||| Sbjct: 173940 gatgcagcagcccaggatgctg 173919 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 245 gatgcagcagcccaggatgctg 266 |||||||||||||||||||||| Sbjct: 173802 gatgcagcagcccaggatgctg 173781 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 245 gatgcagcagcccaggatgctg 266 |||||||||||||||||||||| Sbjct: 173664 gatgcagcagcccaggatgctg 173643 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 245 gatgcagcagcccaggatgctg 266 |||||||||||||||||||||| Sbjct: 173526 gatgcagcagcccaggatgctg 173505
>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12, complete sequence Length = 177327 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 439 tgttcgacgaaatgccgcgccgggac 464 |||| ||||||||||||||||||||| Sbjct: 109720 tgtttgacgaaatgccgcgccgggac 109695
>gb|AC154419.2| Mus musculus BAC clone RP24-212C1 from chromosome 14, complete sequence Length = 167114 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 245 gatgcagcagcccaggatgctg 266 |||||||||||||||||||||| Sbjct: 116921 gatgcagcagcccaggatgctg 116942 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 245 gatgcagcagcccaggatgctg 266 |||||||||||||||||||||| Sbjct: 116783 gatgcagcagcccaggatgctg 116804 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 245 gatgcagcagcccaggatgctg 266 |||||||||||||||||||||| Sbjct: 116645 gatgcagcagcccaggatgctg 116666 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 245 gatgcagcagcccaggatgctg 266 |||||||||||||||||||||| Sbjct: 116507 gatgcagcagcccaggatgctg 116528
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 435 aggctgttcgacgaaatgccgcgccg 460 |||||||||||||| ||||||||||| Sbjct: 11168134 aggctgttcgacgagatgccgcgccg 11168109 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 429 gcccagaggctgttcgacgaaatgcc 454 ||||||||| |||||||||||||||| Sbjct: 519974 gcccagagggtgttcgacgaaatgcc 519949 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 429 gcccagaggctgttcgacgaaatgcc 454 ||||||||| |||||||||||||||| Sbjct: 500856 gcccagagggtgttcgacgaaatgcc 500831 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 ccgcgcggccgcgccgccgtc 287 ||||||||||||||||||||| Sbjct: 20318547 ccgcgcggccgcgccgccgtc 20318527
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 429 gcccagaggctgttcgacgaaatgcc 454 ||||||||| |||||||||||||||| Sbjct: 446556 gcccagagggtgttcgacgaaatgcc 446531
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 439 tgttcgacgaaatgccgcgccgggac 464 ||||||||| |||||||||||||||| Sbjct: 663282 tgttcgacggaatgccgcgccgggac 663307 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 428 cgcccagaggctgttcgacgaaatgccgcgccggga 463 ||||| |||| |||||||||||||||| | |||||| Sbjct: 3023764 cgcccggagggtgttcgacgaaatgccccaccggga 3023799
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 439 tgttcgacgaaatgccgcgccgggac 464 |||| ||||||||||||||||||||| Sbjct: 3319605 tgtttgacgaaatgccgcgccgggac 3319630 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 aggctgttcgacgaaatgccg 455 ||||||||||||||||||||| Sbjct: 6087373 aggctgttcgacgaaatgccg 6087353 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 aggctgttcgacgaaatgcc 454 |||||||||||||||||||| Sbjct: 18161975 aggctgttcgacgaaatgcc 18161994 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 aggctgttcgacgaaatgcc 454 |||||||||||||||||||| Sbjct: 11383120 aggctgttcgacgaaatgcc 11383139
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 438 ctgttcgacgaaatgccgcgcc 459 |||||||||||||||||||||| Sbjct: 15925359 ctgttcgacgaaatgccgcgcc 15925338
>gb|AC119797.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083G16, complete sequence Length = 145590 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 439 tgttcgacgaaatgccgcgccgggac 464 |||| ||||||||||||||||||||| Sbjct: 144367 tgtttgacgaaatgccgcgccgggac 144392
>dbj|AP004131.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1057_F01 Length = 120026 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 438 ctgttcgacgaaatgccgcgcc 459 |||||||||||||||||||||| Sbjct: 69034 ctgttcgacgaaatgccgcgcc 69013
>dbj|AK103426.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128L01, full insert sequence Length = 2413 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 429 gcccagaggctgttcgacgaaatgcc 454 ||||||||| |||||||||||||||| Sbjct: 407 gcccagagggtgttcgacgaaatgcc 432
>dbj|AK103016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116M22, full insert sequence Length = 2705 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 439 tgttcgacgaaatgccgcgccgggac 464 ||||||||| |||||||||||||||| Sbjct: 424 tgttcgacggaatgccgcgccgggac 449
>dbj|AK101509.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045G01, full insert sequence Length = 3468 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 439 tgttcgacgaaatgccgcgccgggac 464 ||||||||| |||||||||||||||| Sbjct: 424 tgttcgacggaatgccgcgccgggac 449
>dbj|AK066711.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075E10, full insert sequence Length = 3324 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 438 ctgttcgacgaaatgccgcgcc 459 |||||||||||||||||||||| Sbjct: 401 ctgttcgacgaaatgccgcgcc 422
>emb|CT025694.11| Mouse DNA sequence from clone RP24-66N5 on chromosome 14, complete sequence Length = 203022 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 245 gatgcagcagcccaggatgctg 266 |||||||||||||||||||||| Sbjct: 189751 gatgcagcagcccaggatgctg 189730 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 245 gatgcagcagcccaggatgctg 266 |||||||||||||||||||||| Sbjct: 189613 gatgcagcagcccaggatgctg 189592 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 245 gatgcagcagcccaggatgctg 266 |||||||||||||||||||||| Sbjct: 189475 gatgcagcagcccaggatgctg 189454 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 245 gatgcagcagcccaggatgctg 266 |||||||||||||||||||||| Sbjct: 189337 gatgcagcagcccaggatgctg 189316
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 429 gcccagaggctgttcgacgaaatgcc 454 ||||||||| |||||||||||||||| Sbjct: 446556 gcccagagggtgttcgacgaaatgcc 446531
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 435 aggctgttcgacgaaatgccgcgccg 460 |||||||||||||| ||||||||||| Sbjct: 11167805 aggctgttcgacgagatgccgcgccg 11167780 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 429 gcccagaggctgttcgacgaaatgcc 454 ||||||||| |||||||||||||||| Sbjct: 519974 gcccagagggtgttcgacgaaatgcc 519949 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 429 gcccagaggctgttcgacgaaatgcc 454 ||||||||| |||||||||||||||| Sbjct: 500856 gcccagagggtgttcgacgaaatgcc 500831 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 ccgcgcggccgcgccgccgtc 287 ||||||||||||||||||||| Sbjct: 20244761 ccgcgcggccgcgccgccgtc 20244741
>emb|AL831796.5|CNS08CA9 Oryza sativa chromosome 12, . BAC OSJNBa0012G19 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157771 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 435 aggctgttcgacgaaatgccgcgccg 460 |||||||||||||| ||||||||||| Sbjct: 18039 aggctgttcgacgagatgccgcgccg 18064
>emb|AL731875.2|CNS08C8F Oryza sativa chromosome 12, . BAC OJ1060_G11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 108805 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 435 aggctgttcgacgaaatgccgcgccg 460 |||||||||||||| ||||||||||| Sbjct: 88524 aggctgttcgacgagatgccgcgccg 88549
>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 164143 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 429 gcccagaggctgttcgacgaaatgcc 454 ||||||||| |||||||||||||||| Sbjct: 153874 gcccagagggtgttcgacgaaatgcc 153849
>emb|BX000493.1|CNS08CDJ Oryza sativa chromosome 11, . BAC OSJNBb0037D03 of library OSJNBb from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130544 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 429 gcccagaggctgttcgacgaaatgcc 454 ||||||||| |||||||||||||||| Sbjct: 123757 gcccagagggtgttcgacgaaatgcc 123782
>emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa0024J08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141089 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 429 gcccagaggctgttcgacgaaatgcc 454 ||||||||| |||||||||||||||| Sbjct: 45916 gcccagagggtgttcgacgaaatgcc 45941 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 429 gcccagaggctgttcgacgaaatgcc 454 ||||||||| |||||||||||||||| Sbjct: 26798 gcccagagggtgttcgacgaaatgcc 26823
>gb|U58680.1|PCU58680 Porphyridium cruentum light-harvesting complex I polypeptide (Lhca2) mRNA, complete cds Length = 797 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 479 cgccatgcttgccgcgctcggc 500 |||||||||||||||||||||| Sbjct: 311 cgccatgcttgccgcgctcggc 332
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22, complete sequence Length = 117919 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 439 tgttcgacgaaatgccgcgccgggac 464 ||||||||| |||||||||||||||| Sbjct: 8481 tgttcgacggaatgccgcgccgggac 8506
>ref|XM_472774.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2757 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 gaggctgttcgacgaaatgcc 454 ||||||||||||||||||||| Sbjct: 495 gaggctgttcgacgaaatgcc 515
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 cggcatgccgcggccgccgcg 321 ||||||||||||||||||||| Sbjct: 192092 cggcatgccgcggccgccgcg 192112
>emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1358B12, complete sequence Length = 131246 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 gaggctgttcgacgaaatgcc 454 ||||||||||||||||||||| Sbjct: 129001 gaggctgttcgacgaaatgcc 128981
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 cggcatgccgcggccgccgcg 321 ||||||||||||||||||||| Sbjct: 1587600 cggcatgccgcggccgccgcg 1587620
>emb|AL663017.3|OSJN00149 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060P14, complete sequence Length = 139418 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 gaggctgttcgacgaaatgcc 454 ||||||||||||||||||||| Sbjct: 22853 gaggctgttcgacgaaatgcc 22833
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 gaggctgttcgacgaaatgcc 454 ||||||||||||||||||||| Sbjct: 18305117 gaggctgttcgacgaaatgcc 18305137 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 aggctgttcgacgaaatgcc 454 |||||||||||||||||||| Sbjct: 14553034 aggctgttcgacgaaatgcc 14553053
>gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090D11, complete sequence Length = 174865 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 aggctgttcgacgaaatgccg 455 ||||||||||||||||||||| Sbjct: 81636 aggctgttcgacgaaatgccg 81616
>dbj|AP004266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0038F10 Length = 153929 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 gaggctgttcgacgaaatgcc 454 ||||||||||||||||||||| Sbjct: 34612 gaggctgttcgacgaaatgcc 34632
>dbj|AK108270.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-C02, full insert sequence Length = 972 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 gaggctgttcgacgaaatgcc 454 ||||||||||||||||||||| Sbjct: 27 gaggctgttcgacgaaatgcc 7
>dbj|AK107998.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-G03, full insert sequence Length = 651 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 gaggctgttcgacgaaatgcc 454 ||||||||||||||||||||| Sbjct: 401 gaggctgttcgacgaaatgcc 421
>dbj|AK106498.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-E05, full insert sequence Length = 1341 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 aggctgttcgacgaaatgccg 455 ||||||||||||||||||||| Sbjct: 318 aggctgttcgacgaaatgccg 338
>dbj|AK100348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082M18, full insert sequence Length = 4012 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 gaggctgttcgacgaaatgcc 454 ||||||||||||||||||||| Sbjct: 537 gaggctgttcgacgaaatgcc 557
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 278 cgccgccgtcctgcgcgcggt 298 ||||||||||||||||||||| Sbjct: 1974299 cgccgccgtcctgcgcgcggt 1974279
>emb|AL731745.5|CNS08C7U Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0070A12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 41351 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 ccgcgcggccgcgccgccgtc 287 ||||||||||||||||||||| Sbjct: 31978 ccgcgcggccgcgccgccgtc 31958
>ref|XM_471009.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1596 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 aggctgttcgacgaaatgcc 454 |||||||||||||||||||| Sbjct: 199 aggctgttcgacgaaatgcc 218
>ref|NM_191755.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1854 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gaggctgttcgacgaaatgc 453 |||||||||||||||||||| Sbjct: 690 gaggctgttcgacgaaatgc 709
>ref|NM_192751.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2403 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 aggctgttcgacgaaatgcc 454 |||||||||||||||||||| Sbjct: 592 aggctgttcgacgaaatgcc 611
>ref|NM_193331.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2550 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 tgctgccgcgcggccgcgccgccg 285 ||||||||||| |||||||||||| Sbjct: 254 tgctgccgcgccgccgcgccgccg 231
>ref|XM_477807.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2274 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 aggctgttcgacgaaatgcc 454 |||||||||||||||||||| Sbjct: 1099 aggctgttcgacgaaatgcc 1118
>gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0059G01, complete sequence Length = 141661 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 428 cgcccagaggctgttcgacgaaatgccgcgccggga 463 ||||| |||| |||||||||||||||| | |||||| Sbjct: 11008 cgcccggagggtgttcgacgaaatgccccaccggga 11043
>gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete sequence Length = 132981 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 aggctgttcgacgaaatgcc 454 |||||||||||||||||||| Sbjct: 73039 aggctgttcgacgaaatgcc 73058
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 ccgccttgctcgcccgctac 404 |||||||||||||||||||| Sbjct: 939821 ccgccttgctcgcccgctac 939802
>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16, complete sequence Length = 159525 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 428 cgcccagaggctgttcgacgaaatgccgcgccggga 463 ||||| |||| |||||||||||||||| | |||||| Sbjct: 117780 cgcccggagggtgttcgacgaaatgccccaccggga 117815
>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence Length = 204120 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 437 gctgttcgacgaaatgccgcgccgggac 464 |||||||||||| ||||| ||||||||| Sbjct: 166970 gctgttcgacgagatgccccgccgggac 166943
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 cgctacggcaagcgcggcct 418 |||||||||||||||||||| Sbjct: 2486346 cgctacggcaagcgcggcct 2486327 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 ccgccttgctcgcccgctac 404 |||||||||||||||||||| Sbjct: 1982531 ccgccttgctcgcccgctac 1982512 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 atgcttgccgcgctcggcgc 502 |||||||||||||||||||| Sbjct: 975013 atgcttgccgcgctcggcgc 974994
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 437 gctgttcgacgaaatgccgcgccg 460 ||||||||| |||||||||||||| Sbjct: 340297 gctgttcgatgaaatgccgcgccg 340320
>gb|AY307101.1| Erwinia amylovora cyclopropane fatty acid synthase (cfa) gene, partial cds; riboflavin synthase (ribC) and multidrug efflux transporter (norM) genes, complete cds; and pyruvate kinase I (pykF) gene, partial cds Length = 4097 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 acccggtcgccttcaacgcc 482 |||||||||||||||||||| Sbjct: 1213 acccggtcgccttcaacgcc 1232
>gb|BC025556.1| Mus musculus centaurin, beta 5, mRNA (cDNA clone IMAGE:5321797), containing frame-shift errors Length = 4157 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 gatgcagcagcccaggatgc 264 |||||||||||||||||||| Sbjct: 2340 gatgcagcagcccaggatgc 2321
>gb|BC026407.1| Mus musculus centaurin, beta 5, mRNA (cDNA clone IMAGE:4216148), with apparent retained intron Length = 1621 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 gatgcagcagcccaggatgc 264 |||||||||||||||||||| Sbjct: 233 gatgcagcagcccaggatgc 214
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 cggccgcgccgccgtcctgcgcgc 295 ||||||||||||||||||| |||| Sbjct: 109602 cggccgcgccgccgtcctgagcgc 109625
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 ccgccttgctcgcccgctac 404 |||||||||||||||||||| Sbjct: 2394438 ccgccttgctcgcccgctac 2394457 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 cgctacggcaagcgcggcct 418 |||||||||||||||||||| Sbjct: 1896463 cgctacggcaagcgcggcct 1896482
>emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H06, complete sequence Length = 143730 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 aggctgttcgacgaaatgcc 454 |||||||||||||||||||| Sbjct: 137448 aggctgttcgacgaaatgcc 137429
>emb|CR859747.1| Pongo pygmaeus mRNA; cDNA DKFZp469I0226 (from clone DKFZp469I0226) Length = 2662 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 gcggccgccgcgaagagcag 329 |||||||||||||||||||| Sbjct: 36 gcggccgccgcgaagagcag 17
>gb|DQ418486.2| Burkholderia pseudomallei isolate 204 putative membrane protein, MrgR (mrgR), MrgS (mrgS), putative signal transduction repressor protein, hypothetical arginine/serine rich protein, putative membrane transport-associated protein, and putative lipase genes, complete cds Length = 10026 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 cgctacggcaagcgcggcct 418 |||||||||||||||||||| Sbjct: 2519 cgctacggcaagcgcggcct 2538
>dbj|AK145262.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN full-length enriched library, clone:G930029N10 product:centaurin, beta 5, full insert sequence Length = 3278 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 gatgcagcagcccaggatgc 264 |||||||||||||||||||| Sbjct: 1485 gatgcagcagcccaggatgc 1466
>dbj|AK153961.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430014D20 product:centaurin, beta 5, full insert sequence Length = 2000 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 gatgcagcagcccaggatgc 264 |||||||||||||||||||| Sbjct: 197 gatgcagcagcccaggatgc 178
>gb|AC007814.6|AC007814 Drosophila melanogaster, chromosome 3R, region 91D-91E, BAC clone BACR44N12, complete sequence Length = 204173 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 gatgcagcagcccaggatgc 264 |||||||||||||||||||| Sbjct: 27474 gatgcagcagcccaggatgc 27455
>gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0005J15, complete sequence Length = 159270 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 aggctgttcgacgaaatgcc 454 |||||||||||||||||||| Sbjct: 94654 aggctgttcgacgaaatgcc 94673
>dbj|AP004232.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0051H17 Length = 187471 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 tgctgccgcgcggccgcgccgccg 285 ||||||||||| |||||||||||| Sbjct: 94870 tgctgccgcgccgccgcgccgccg 94847
>dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683B11 Length = 155955 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gaggctgttcgacgaaatgc 453 |||||||||||||||||||| Sbjct: 19336 gaggctgttcgacgaaatgc 19355
>dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131B07 Length = 109135 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gaggctgttcgacgaaatgc 453 |||||||||||||||||||| Sbjct: 104972 gaggctgttcgacgaaatgc 104991
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 gccgcgccgggacccggtcg 471 |||||||||||||||||||| Sbjct: 4875011 gccgcgccgggacccggtcg 4875030
>gb|AC021054.28| Homo sapiens 12 BAC RP11-218M22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174231 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 aatggaaatgcagtttcctg 220 |||||||||||||||||||| Sbjct: 57927 aatggaaatgcagtttcctg 57908
>dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0046B10 Length = 142596 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 aggctgttcgacgaaatgcc 454 |||||||||||||||||||| Sbjct: 65215 aggctgttcgacgaaatgcc 65196
>dbj|AP005783.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0095H08 Length = 140777 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 aggctgttcgacgaaatgcc 454 |||||||||||||||||||| Sbjct: 66299 aggctgttcgacgaaatgcc 66318
>dbj|AK120659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158F03, full insert sequence Length = 3251 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 aggctgttcgacgaaatgcc 454 |||||||||||||||||||| Sbjct: 692 aggctgttcgacgaaatgcc 711
>dbj|AK120095.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022A13, full insert sequence Length = 3601 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 aggctgttcgacgaaatgcc 454 |||||||||||||||||||| Sbjct: 558 aggctgttcgacgaaatgcc 577
>dbj|AK110511.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-167-G02, full insert sequence Length = 2433 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 437 gctgttcgacgaaatgccgcgccg 460 |||| ||||||||||||||||||| Sbjct: 481 gctgctcgacgaaatgccgcgccg 504
>dbj|AK110291.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-F12, full insert sequence Length = 2695 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 aggctgttcgacgaaatgcc 454 |||||||||||||||||||| Sbjct: 613 aggctgttcgacgaaatgcc 632
>dbj|AK108071.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-C07, full insert sequence Length = 1698 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 428 cgcccagaggctgttcgacgaaatgccgcgccggga 463 ||||| |||| |||||||||||||||| | |||||| Sbjct: 354 cgcccggagggtgttcgacgaaatgccccaccggga 389
>dbj|AK103144.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120H12, full insert sequence Length = 2559 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 aggctgttcgacgaaatgcc 454 |||||||||||||||||||| Sbjct: 409 aggctgttcgacgaaatgcc 428
>dbj|AK073722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060P16, full insert sequence Length = 2498 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 aggctgttcgacgaaatgcc 454 |||||||||||||||||||| Sbjct: 409 aggctgttcgacgaaatgcc 428
>gb|AE003724.3| Drosophila melanogaster chromosome 3R, section 62 of 118 of the complete sequence Length = 232330 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 gatgcagcagcccaggatgc 264 |||||||||||||||||||| Sbjct: 6567 gatgcagcagcccaggatgc 6548
>emb|AL929117.7| Mouse DNA sequence from clone RP23-442K5 on chromosome 2, complete sequence Length = 161940 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 ggagaggagccacggcagat 247 |||||||||||||||||||| Sbjct: 57296 ggagaggagccacggcagat 57277
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 cgcgcggccgcgccgccgtc 287 |||||||||||||||||||| Sbjct: 2834657 cgcgcggccgcgccgccgtc 2834638
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 aggagaggagccacggcaga 246 |||||||||||||||||||| Sbjct: 1852615 aggagaggagccacggcaga 1852596
>gb|AC109618.12| Mus musculus chromosome 8, clone RP23-478L3, complete sequence Length = 173511 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 ttcctgccgaaaaggagaggagcc 238 ||||||||| |||||||||||||| Sbjct: 120405 ttcctgccgtaaaggagaggagcc 120428
>gb|L11163.1|MUSCOADEHY Mouse short chain acyl-CoA dehydrogenase mRNA, complete cds Length = 1799 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 acggtggtgtttgccagcac 195 |||||||||||||||||||| Sbjct: 583 acggtggtgtttgccagcac 602 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,425,312 Number of Sequences: 3902068 Number of extensions: 3425312 Number of successful extensions: 82533 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 116 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 78198 Number of HSP's gapped (non-prelim): 4335 length of query: 511 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 488 effective length of database: 17,143,297,704 effective search space: 8365929279552 effective search space used: 8365929279552 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)