>gb|AE002160.2| Chlamydia muridarum Nigg, complete genome
          Length = 1072950

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 182    aactaaatatacgataaactaaa 204
              |||||||||||||||||||||||
Sbjct: 655180 aactaaatatacgataaactaaa 655158

>gb|AC119793.3| Homo sapiens 12 BAC RP11-390F17 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 73625

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 459   ttcttcctcttctttgacagga 480
             ||||||||||||||||||||||
Sbjct: 23325 ttcttcctcttctttgacagga 23346

>emb|CT009651.1| Medicago truncatula chromosome 5 clone mte1-70c15, COMPLETE SEQUENCE
          Length = 110880

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 447   tggagaaactggttcttcctct 468
             ||||||||||||||||||||||
Sbjct: 17917 tggagaaactggttcttcctct 17938

>emb|AL138778.13| Human DNA sequence from clone RP11-57K16 on chromosome 1q31.1-31.3,
             complete sequence
          Length = 167857

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 429   agaagatttctttctctctgg 449
             |||||||||||||||||||||
Sbjct: 76019 agaagatttctttctctctgg 76039

>ref|XM_777180.1| PREDICTED: Strongylocentrotus purpuratus similar to Antigen KI-67
            (LOC576916), mRNA
          Length = 7071

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 459  ttcttcctcttctttgacagg 479
            |||||||||||||||||||||
Sbjct: 1173 ttcttcctcttctttgacagg 1153

>gb|AC062029.7| Homo sapiens BAC clone RP11-450E9 from 2, complete sequence
          Length = 129832

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 454   actggttcttcctcttctttg 474
             |||||||||||||||||||||
Sbjct: 44156 actggttcttcctcttctttg 44136

>gb|AC146212.3| Pan troglodytes BAC clone RP43-33F1 from 7, complete sequence
          Length = 138501

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 435    tttctttctctctggagaaa 454
              ||||||||||||||||||||
Sbjct: 118887 tttctttctctctggagaaa 118868

>gb|AC132099.3| Mus musculus BAC clone RP24-292F6 from chromosome 16, complete sequence
          Length = 160650

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                          
Query: 224    actcatctgcagtagcagccagccactc 251
              ||||||||||||||||| ||||||||||
Sbjct: 137915 actcatctgcagtagca-ccagccactc 137889

>gb|AC122385.2| Mus musculus BAC clone RP24-72B22 from chromosome 1, complete sequence
          Length = 178821

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 435    tttctttctctctggagaaa 454
              ||||||||||||||||||||
Sbjct: 157393 tttctttctctctggagaaa 157412

>emb|CR726725.1|CNS0GNOR Tetraodon nigroviridis full-length cDNA
          Length = 1406

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 22   atttgatatccggtcagttt 41
            ||||||||||||||||||||
Sbjct: 1322 atttgatatccggtcagttt 1341

>gb|AC096665.1| Homo sapiens BAC clone RP11-304A23 from 7, complete sequence
          Length = 92587

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 435   tttctttctctctggagaaa 454
             ||||||||||||||||||||
Sbjct: 29320 tttctttctctctggagaaa 29339

>gb|AC015933.9| Homo sapiens chromosome 18, clone CTD-2023G8, complete sequence
          Length = 249021

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    acaaagcataagacaacaga 309
              ||||||||||||||||||||
Sbjct: 192605 acaaagcataagacaacaga 192624

>gb|AC080023.6| Homo sapiens chromosome 11, clone RP11-351I24, complete sequence
          Length = 189886

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 109    cttctgctcccaatttcttttcaa 132
              |||||||||||| |||||||||||
Sbjct: 147656 cttctgctcccattttcttttcaa 147679

>gb|AC015700.8| Homo sapiens chromosome 11, clone RP11-168C2, complete sequence
          Length = 177984

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 109    cttctgctcccaatttcttttcaa 132
              |||||||||||| |||||||||||
Sbjct: 164041 cttctgctcccattttcttttcaa 164018

>gb|AC134845.5| Mus musculus BAC clone RP24-424K5 from chromosome 1, complete sequence
          Length = 194449

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 435   tttctttctctctggagaaa 454
             ||||||||||||||||||||
Sbjct: 22924 tttctttctctctggagaaa 22943

>gb|AC122218.4| Mus musculus BAC clone RP23-118J7 from chromosome 16, complete sequence
          Length = 196599

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                          
Query: 224    actcatctgcagtagcagccagccactc 251
              ||||||||||||||||| ||||||||||
Sbjct: 167639 actcatctgcagtagca-ccagccactc 167665

>gb|AC166329.3| Pan troglodytes BAC clone CH251-143I6 from chromosome unknown, complete
              sequence
          Length = 173896

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    acaaagcataagacaacaga 309
              ||||||||||||||||||||
Sbjct: 118648 acaaagcataagacaacaga 118667

>emb|AL844582.7| Mouse DNA sequence from clone RP23-234C7 on chromosome 2, complete
              sequence
          Length = 221723

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 114    gctcccaatttcttttcaac 133
              ||||||||||||||||||||
Sbjct: 179269 gctcccaatttcttttcaac 179288


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,108,072
Number of Sequences: 3902068
Number of extensions: 5108072
Number of successful extensions: 106123
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 106081
Number of HSP's gapped (non-prelim): 44
length of query: 495
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 473
effective length of database: 17,147,199,772
effective search space: 8110625492156
effective search space used: 8110625492156
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)