Clone Name | rbart28f07 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 509 bits (257), Expect = e-141 Identities = 365/401 (91%) Strand = Plus / Minus Query: 118 tcattccttgtgatctctgcccttctttctcttccatttgagatatatttggagagagag 177 |||||||||||| |||||| ||||||||||||||||||||||| | ||||| | |||||| Sbjct: 22923071 tcattccttgtggtctctgaccttctttctcttccatttgagaaagatttgtaaagagag 22923012 Query: 178 gccagaaaagaccatcacaacacttccccattgctccatggacagtgggttaccactgat 237 |||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||| Sbjct: 22923011 accagaaaagaccatcacaacacttccccattgcttcaaggagagtgggttaccactgat 22922952 Query: 238 aactgatgagatgacgatgctcatgaacttgcgggtggtggtgatggtagtgttagtaag 297 || || |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22922951 gacggaggagatgacaatgctcatgaacttgcgggtggtggtgatggtagtgttagtaag 22922892 Query: 298 agaaccgaatcggctgatggttaggaagataaaattctgacccacggcaccgcataggca 357 ||| || ||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 22922891 agagccaaatcggctgatggttaggaagatgaaattctgacccacggcaccacacaggca 22922832 Query: 358 gaacatgagaatgtcccaggccacctctgggttctcccggcaaaaactcaccgcctcaaa 417 ||||| |||||||||||| |||||||||||||||||| ||||||| ||||| |||||||| Sbjct: 22922831 gaacaggagaatgtcccatgccacctctgggttctcctggcaaaatctcactgcctcaaa 22922772 Query: 418 accgtttgcgtatggccagttactaaacagtaaaggcgccacaaacataattacagtatt 477 |||||| ||||| ||||| ||||| || ||||| || || ||||||||||| |||| ||| Sbjct: 22922771 accgttggcgtaaggccaattactgaatagtaatggagcaacaaacataatcacagcatt 22922712 Query: 478 gtatatggttccccagaggttcatgccaagcattatatccc 518 ||||||||| |||||||| |||||||||||||||||||||| Sbjct: 22922711 gtatatggtcccccagagattcatgccaagcattatatccc 22922671
>dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0502H06 Length = 165630 Score = 509 bits (257), Expect = e-141 Identities = 365/401 (91%) Strand = Plus / Minus Query: 118 tcattccttgtgatctctgcccttctttctcttccatttgagatatatttggagagagag 177 |||||||||||| |||||| ||||||||||||||||||||||| | ||||| | |||||| Sbjct: 97893 tcattccttgtggtctctgaccttctttctcttccatttgagaaagatttgtaaagagag 97834 Query: 178 gccagaaaagaccatcacaacacttccccattgctccatggacagtgggttaccactgat 237 |||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||| Sbjct: 97833 accagaaaagaccatcacaacacttccccattgcttcaaggagagtgggttaccactgat 97774 Query: 238 aactgatgagatgacgatgctcatgaacttgcgggtggtggtgatggtagtgttagtaag 297 || || |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97773 gacggaggagatgacaatgctcatgaacttgcgggtggtggtgatggtagtgttagtaag 97714 Query: 298 agaaccgaatcggctgatggttaggaagataaaattctgacccacggcaccgcataggca 357 ||| || ||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 97713 agagccaaatcggctgatggttaggaagatgaaattctgacccacggcaccacacaggca 97654 Query: 358 gaacatgagaatgtcccaggccacctctgggttctcccggcaaaaactcaccgcctcaaa 417 ||||| |||||||||||| |||||||||||||||||| ||||||| ||||| |||||||| Sbjct: 97653 gaacaggagaatgtcccatgccacctctgggttctcctggcaaaatctcactgcctcaaa 97594 Query: 418 accgtttgcgtatggccagttactaaacagtaaaggcgccacaaacataattacagtatt 477 |||||| ||||| ||||| ||||| || ||||| || || ||||||||||| |||| ||| Sbjct: 97593 accgttggcgtaaggccaattactgaatagtaatggagcaacaaacataatcacagcatt 97534 Query: 478 gtatatggttccccagaggttcatgccaagcattatatccc 518 ||||||||| |||||||| |||||||||||||||||||||| Sbjct: 97533 gtatatggtcccccagagattcatgccaagcattatatccc 97493
>dbj|AK060274.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-G07, full insert sequence Length = 1433 Score = 509 bits (257), Expect = e-141 Identities = 365/401 (91%) Strand = Plus / Minus Query: 118 tcattccttgtgatctctgcccttctttctcttccatttgagatatatttggagagagag 177 |||||||||||| |||||| ||||||||||||||||||||||| | ||||| | |||||| Sbjct: 1130 tcattccttgtggtctctgaccttctttctcttccatttgagaaagatttgtaaagagag 1071 Query: 178 gccagaaaagaccatcacaacacttccccattgctccatggacagtgggttaccactgat 237 |||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||| Sbjct: 1070 accagaaaagaccatcacaacacttccccattgcttcaaggagagtgggttaccactgat 1011 Query: 238 aactgatgagatgacgatgctcatgaacttgcgggtggtggtgatggtagtgttagtaag 297 || || |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1010 gacggaggagatgacaatgctcatgaacttgcgggtggtggtgatggtagtgttagtaag 951 Query: 298 agaaccgaatcggctgatggttaggaagataaaattctgacccacggcaccgcataggca 357 ||| || ||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 950 agagccaaatcggctgatggttaggaagatgaaattctgacccacggcaccacacaggca 891 Query: 358 gaacatgagaatgtcccaggccacctctgggttctcccggcaaaaactcaccgcctcaaa 417 ||||| |||||||||||| |||||||||||||||||| ||||||| ||||| |||||||| Sbjct: 890 gaacaggagaatgtcccatgccacctctgggttctcctggcaaaatctcactgcctcaaa 831 Query: 418 accgtttgcgtatggccagttactaaacagtaaaggcgccacaaacataattacagtatt 477 |||||| ||||| ||||| ||||| || ||||| || || ||||||||||| |||| ||| Sbjct: 830 accgttggcgtaaggccaattactgaatagtaatggagcaacaaacataatcacagcatt 771 Query: 478 gtatatggttccccagaggttcatgccaagcattatatccc 518 ||||||||| |||||||| |||||||||||||||||||||| Sbjct: 770 gtatatggtcccccagagattcatgccaagcattatatccc 730
>dbj|AK071175.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084M11, full insert sequence Length = 1427 Score = 502 bits (253), Expect = e-139 Identities = 364/401 (90%) Strand = Plus / Minus Query: 118 tcattccttgtgatctctgcccttctttctcttccatttgagatatatttggagagagag 177 |||||||||||| |||||| ||||||||||||||||||||||| | ||||| | |||||| Sbjct: 1131 tcattccttgtggtctctgaccttctttctcttccatttgagaaagatttgtaaagagag 1072 Query: 178 gccagaaaagaccatcacaacacttccccattgctccatggacagtgggttaccactgat 237 |||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||| Sbjct: 1071 accagaaaagaccatcacaacacttccccattgcttcaaggagagtgggttaccactgat 1012 Query: 238 aactgatgagatgacgatgctcatgaacttgcgggtggtggtgatggtagtgttagtaag 297 || || |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1011 gacggaggagatgacaatgctcatgaacttgcgggtggtggtgatggtagtgttagtaag 952 Query: 298 agaaccgaatcggctgatggttaggaagataaaattctgacccacggcaccgcataggca 357 ||| || ||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 951 agagccaaatcggctgatggttaggaagatgaaattctgacccacggcaccacacaggca 892 Query: 358 gaacatgagaatgtcccaggccacctctgggttctcccggcaaaaactcaccgcctcaaa 417 ||||| |||||||||||| |||||||||||||||||| ||||||| ||||| |||||||| Sbjct: 891 gaacaggagaatgtcccatgccacctctgggttctcctggcaaaatctcactgcctcaaa 832 Query: 418 accgtttgcgtatggccagttactaaacagtaaaggcgccacaaacataattacagtatt 477 |||||| ||||| ||||| ||||| || ||||| || || ||||||||||| |||| ||| Sbjct: 831 accgttggcgtaaggccaattactgaatagtaatggagcaacaaacataatcacagcatt 772 Query: 478 gtatatggttccccagaggttcatgccaagcattatatccc 518 |||| |||| |||||||| |||||||||||||||||||||| Sbjct: 771 gtatgtggtcccccagagattcatgccaagcattatatccc 731
>gb|AY110443.1| Zea mays CL17797_1 mRNA sequence Length = 800 Score = 347 bits (175), Expect = 2e-92 Identities = 332/386 (86%) Strand = Plus / Plus Query: 133 tctgcccttctttctcttccatttgagatatatttggagagagaggccagaaaagaccat 192 |||| ||||||||||||||||||||||||||||||||| ||||||||| | |||||||| Sbjct: 232 tctggccttctttctcttccatttgagatatatttggatagagaggcctaagaagaccat 291 Query: 193 cacaacacttccccattgctccatggacagtgggttaccactgataactgatgagatgac 252 ||||||||| |||||||||| || || | ||| || |||||||| || ||||| | || Sbjct: 292 cacaacactaccccattgcttcaaagataatggattgccactgatgacggatgaaaccac 351 Query: 253 gatgctcatgaacttgcgggtggtggtgatggtagtgttagtaagagaaccgaatcggct 312 ||||||||||| || |||||||| ||||| || ||||||||||||| ||||| | ||| Sbjct: 352 aatgctcatgaatttacgggtggtagtgatcgttgtgttagtaagagcgccgaacctgct 411 Query: 313 gatggttaggaagataaaattctgacccacggcaccgcataggcagaacatgagaatgtc 372 |||||||| |||||| |||||||| |||||||| || ||||||||||||| || |||||| Sbjct: 412 gatggttaagaagatgaaattctgccccacggcgccacataggcagaacaggaaaatgtc 471 Query: 373 ccaggccacctctgggttctcccggcaaaaactcaccgcctcaaaaccgtttgcgtatgg 432 |||||||||||||||||||||| ||||||| |||| ||||| ||||| ||||| ||||| Sbjct: 472 ccaggccacctctgggttctcctggcaaaatctcaatgcctcgaaaccatttgcatatgg 531 Query: 433 ccagttactaaacagtaaaggcgccacaaacataattacagtattgtatatggttcccca 492 ||||||||| || ||||| ||||| |||||||||| ||||| ||| |||||||| | Sbjct: 532 ccagttactgaatagtaatggcgcaacaaacataactacagcattatatatggtnnnnna 591 Query: 493 gaggttcatgccaagcattatatccc 518 |||||||||||||||||||||||||| Sbjct: 592 gaggttcatgccaagcattatatccc 617
>gb|AC149601.3| Medicago truncatula chromosome 7 BAC clone mth2-28b24, complete sequence Length = 112486 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 266 ttgcgggtggtggtgatggtagtgttagtaagagaaccgaatcggctgatggttaggaag 325 ||||| ||||| |||||||||||||||| | ||| || || ||||| ||||| | |||| Sbjct: 97507 ttgcgagtggtcgtgatggtagtgttagctaaagagccaaaccggcttatggtcaagaag 97448 Query: 326 ataaaattctgacccacggcacc 348 ||||| ||||| ||||||||||| Sbjct: 97447 ataaagttctgtcccacggcacc 97425
>emb|CT571261.1| Medicago truncatula chromosome 5 clone mth2-67l4, COMPLETE SEQUENCE Length = 136545 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 266 ttgcgggtggtggtgatggtagtgttagtaagagaaccgaatcggctgatggttaggaag 325 ||||| ||||| |||||||||||||||| | ||| || || ||||| ||||| | |||| Sbjct: 104765 ttgcgagtggtcgtgatggtagtgttagctaaagagccaaaccggcttatggtcaagaag 104824 Query: 326 ataaaattctgacccacggcacc 348 ||||| ||||| ||||||||||| Sbjct: 104825 ataaagttctgtcccacggcacc 104847
>gb|AC135288.1| Solanum demissum chromosome 5 BAC PGEC219 genomic sequence, complete sequence Length = 124895 Score = 60.0 bits (30), Expect = 8e-06 Identities = 99/122 (81%) Strand = Plus / Minus Query: 254 atgctcatgaacttgcgggtggtggtgatggtagtgttagtaagagaaccgaatcggctg 313 ||||||| |||||||| || || |||||||| ||||| || |||||||| ||||| || Sbjct: 25298 atgctcacaaacttgcgagttgtagtgatggttgtgttggtcagagaaccaaatcgacta 25239 Query: 314 atggttaggaagataaaattctgacccacggcaccgcataggcagaacatgagaatgtcc 373 ||||||||||| || || ||||| ||||| || ||||| || ||| | | ||||||||| Sbjct: 25238 atggttaggaaaatgaagttctgtcccacagcgccgcacagacagtaaagaagaatgtcc 25179 Query: 374 ca 375 || Sbjct: 25178 ca 25177
>gb|AC145120.1| Solanum demissum chromosome 5 BAC PGEC446O19 genomic sequence, complete sequence Length = 122450 Score = 60.0 bits (30), Expect = 8e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 254 atgctcatgaacttgcgggtggtggtgatggtagtgttagtaagagaaccgaatcggctg 313 ||||||| |||||||| || || |||||||| ||||| || |||||||| ||||| || Sbjct: 62248 atgctcacaaacttgcgagttgtagtgatggttgtgttggtcagagaaccaaatcgacta 62307 Query: 314 atggttaggaagataaaattctgacccacggcaccgca 351 ||||||||||| || || ||||| ||||| || ||||| Sbjct: 62308 atggttaggaaaatgaagttctgtcccacagcgccgca 62345
>ref|XM_516363.1| PREDICTED: Pan troglodytes golgi autoantigen, golgin subfamily a, 4 (LOC460264), mRNA Length = 7074 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 139 cttctttctcttccatttgagata 162 |||||||||||||||||||||||| Sbjct: 5254 cttctttctcttccatttgagata 5231
>gb|AC097359.2| Homo sapiens chromosome 3 clone RP11-259K5, complete sequence Length = 187127 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 139 cttctttctcttccatttgagata 162 |||||||||||||||||||||||| Sbjct: 145909 cttctttctcttccatttgagata 145886
>gb|AC161757.5| Mus musculus BAC clone RP24-87P2 from chromosome 5, complete sequence Length = 193583 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 270 gggtggtggtgatggtagtgttag 293 |||||||||||||||||||||||| Sbjct: 20255 gggtggtggtgatggtagtgttag 20232
>gb|AC136290.2| Homo sapiens chromosome 3 clone CTD-2104B13, complete sequence Length = 136961 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 139 cttctttctcttccatttgagata 162 |||||||||||||||||||||||| Sbjct: 103283 cttctttctcttccatttgagata 103306
>ref|NM_002078.3| Homo sapiens golgi autoantigen, golgin subfamily a, 4 (GOLGA4), mRNA Length = 7717 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 139 cttctttctcttccatttgagata 162 |||||||||||||||||||||||| Sbjct: 5294 cttctttctcttccatttgagata 5271
>dbj|AP006190.1| Homo sapiens genomic DNA, chromosome 3, clone:RP11-145L6, complete sequence Length = 176082 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 139 cttctttctcttccatttgagata 162 |||||||||||||||||||||||| Sbjct: 115333 cttctttctcttccatttgagata 115310
>gb|U31906.1|HSU31906 Homo sapiens golgin-245 mRNA, complete cds Length = 6965 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 139 cttctttctcttccatttgagata 162 |||||||||||||||||||||||| Sbjct: 4604 cttctttctcttccatttgagata 4581
>gb|U41740.1|HSU41740 Human trans-Golgi p230 mRNA, complete cds Length = 7695 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 139 cttctttctcttccatttgagata 162 |||||||||||||||||||||||| Sbjct: 5275 cttctttctcttccatttgagata 5252
>gb|AC124428.4| Mus musculus BAC clone RP24-239M23 from 5, complete sequence Length = 167334 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 270 gggtggtggtgatggtagtgttag 293 |||||||||||||||||||||||| Sbjct: 79522 gggtggtggtgatggtagtgttag 79499
>dbj|AB209693.1| Homo sapiens mRNA for golgi autoantigen, golgin subfamily a, 4 variant protein Length = 7649 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 139 cttctttctcttccatttgagata 162 |||||||||||||||||||||||| Sbjct: 5331 cttctttctcttccatttgagata 5308
>emb|X82834.1|HSGOLGIN H.sapiens mRNA for golgin Length = 7683 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 139 cttctttctcttccatttgagata 162 |||||||||||||||||||||||| Sbjct: 5197 cttctttctcttccatttgagata 5174
>dbj|AP000493.1| Homo sapiens genomic DNA, chromosome 3p21.3, clone:301 to 308, anti-oncogene region, section 1/5 Length = 200000 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 139 cttctttctcttccatttgagata 162 |||||||||||||||||||||||| Sbjct: 1710 cttctttctcttccatttgagata 1687
>ref|XM_846110.1| PREDICTED: Canis familiaris similar to Golgi autoantigen, golgin subfamily A member 4 (Trans-Golgi p230) (256 kDa golgin) (Golgin-245) (72.1 protein) (LOC477020), mRNA Length = 4559 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 140 ttctttctcttccatttgagata 162 ||||||||||||||||||||||| Sbjct: 2760 ttctttctcttccatttgagata 2738
>gb|AC093323.3| Homo sapiens BAC clone RP11-539L10 from 4, complete sequence Length = 195576 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 gggtggtggtgatggtagtgttagtaa 296 |||||||||||||||||||| |||||| Sbjct: 46575 gggtggtggtgatggtagtggtagtaa 46549 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 tggtggtgatggtagtgttagtaa 296 ||||||||||||||||| |||||| Sbjct: 46509 tggtggtgatggtagtggtagtaa 46486 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 ggtggtggtgatggtagtgttagt 294 ||||||||||||||||||| |||| Sbjct: 46426 ggtggtggtgatggtagtggtagt 46403 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 ggtggtggtgatggtagtgttagt 294 ||||||||||||||||||| |||| Sbjct: 45936 ggtggtggtgatggtagtggtagt 45913
>gb|DQ214606.1| Taeniopygia guttata clone 0058P0014F07 UDP-Glc/Gal endoplasmic reticulum nucleotide sugar transporter-like mRNA, complete sequence Length = 1356 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 gaacttgcgggtggtggtgatg 283 |||||||||||||||||||||| Sbjct: 898 gaacttgcgggtggtggtgatg 877
>gb|DQ214605.1| Taeniopygia guttata clone 0058P0062H10 UDP-Glc/Gal endoplasmic reticulum nucleotide sugar transporter-like mRNA, complete sequence Length = 1345 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 gaacttgcgggtggtggtgatg 283 |||||||||||||||||||||| Sbjct: 887 gaacttgcgggtggtggtgatg 866
>emb|CT010587.5| Mouse DNA sequence from clone RP23-307A6 on chromosome 17, complete sequence Length = 173949 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 370 gtcccaggccacctctgggttc 391 |||||||||||||||||||||| Sbjct: 40032 gtcccaggccacctctgggttc 40011
>emb|Z82217.1|HS78B3 Human DNA sequence from clone RP1-78B3 on chromosome 22, complete sequence Length = 73031 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 362 atgagaatgtcccaggccacctctgg 387 ||||||||||||||||||| |||||| Sbjct: 56482 atgagaatgtcccaggccagctctgg 56507
>gb|AC146469.23| Pan troglodytes clone rp43-45g24, complete sequence Length = 191684 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 362 atgagaatgtcccaggccacctctgg 387 ||||||||||||||||||| |||||| Sbjct: 184137 atgagaatgtcccaggccagctctgg 184112
>gb|AC068056.7| Homo sapiens BAC clone RP11-84M3 from 2, complete sequence Length = 193017 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 134 ctgcccttctttctcttccatt 155 |||||||||||||||||||||| Sbjct: 116516 ctgcccttctttctcttccatt 116537
>gb|AC154790.2| Mus musculus BAC clone RP24-481A4 from 17, complete sequence Length = 194675 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 370 gtcccaggccacctctgggttc 391 |||||||||||||||||||||| Sbjct: 11081 gtcccaggccacctctgggttc 11060
>ref|NM_101303.2| Arabidopsis thaliana pyrimidine nucleotide sugar transporter AT1G14360 mRNA, complete cds Length = 1852 Score = 42.1 bits (21), Expect = 1.8 Identities = 81/101 (80%) Strand = Plus / Minus Query: 275 gtggtgatggtagtgttagtaagagaaccgaatcggctgatggttaggaagataaaattc 334 ||||| ||||| ||||||| ||||| ||||||| ||| || || | |||||| || || Sbjct: 956 gtggttatggtcgtgttagctagagacccgaatctgcttattgtcaagaagatgaagttt 897 Query: 335 tgacccacggcaccgcataggcagaacatgagaatgtccca 375 || || || |||||||||| ||| |||| ||||||||||| Sbjct: 896 tggcctactgcaccgcataaacagtacataagaatgtccca 856
>gb|DQ214604.1| Taeniopygia guttata clone 0058P0013E09 UDP-Glc/Gal endoplasmic reticulum nucleotide sugar transporter-like mRNA, complete sequence Length = 1330 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 aacttgcgggtggtggtgatg 283 ||||||||||||||||||||| Sbjct: 872 aacttgcgggtggtggtgatg 852
>gb|BT015974.1| Drosophila melanogaster RE74713 full insert cDNA Length = 3887 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 ggtggtggtgatggtagtgtt 291 ||||||||||||||||||||| Sbjct: 628 ggtggtggtgatggtagtgtt 608
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 ggtggtggtgatggtagtgtt 291 ||||||||||||||||||||| Sbjct: 498973 ggtggtggtgatggtagtgtt 498993
>gb|AC137679.11| Mus musculus chromosome 12, clone RP23-302N13, complete sequence Length = 186273 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 ggtggtggtgatggtagtgttagta 295 ||||||||||||||| ||||||||| Sbjct: 162492 ggtggtggtgatggtggtgttagta 162468
>gb|AC092245.2| Drosophila melanogaster clone BACR32C03, complete sequence Length = 128623 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 396 ggcaaaaactcaccgcctcaaaacc 420 |||| |||||||||||||||||||| Sbjct: 122033 ggcacaaactcaccgcctcaaaacc 122057
>gb|AC148833.5| Pan troglodytes BAC clone CH251-55M19 from chromosome 7, complete sequence Length = 206418 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 ggtggtggtgatggtagtgtt 291 ||||||||||||||||||||| Sbjct: 134399 ggtggtggtgatggtagtgtt 134379
>emb|CT030267.1| Xenopus tropicalis finished cDNA, clone TEgg119f15 Length = 1420 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 cttgtgatctctgcccttctt 144 ||||||||||||||||||||| Sbjct: 730 cttgtgatctctgcccttctt 710
>emb|CR356222.24| Zebrafish DNA sequence from clone DKEY-103J14 in linkage group 13, complete sequence Length = 206656 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 atatctccacaacaaatgtgt 74 ||||||||||||||||||||| Sbjct: 25531 atatctccacaacaaatgtgt 25551
>emb|AL669849.19| Mouse DNA sequence from clone RP23-341O22 on chromosome 11 Contains part of the Dock2 gene for dedicator of cyto-kinesis 2, complete sequence Length = 148320 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 132 ctctgcccttctttctcttccattt 156 |||||||||||| |||||||||||| Sbjct: 33192 ctctgcccttctgtctcttccattt 33216
>gb|AY114599.1| Arabidopsis thaliana unknown protein (At1g14360) mRNA, complete cds Length = 1053 Score = 42.1 bits (21), Expect = 1.8 Identities = 81/101 (80%) Strand = Plus / Minus Query: 275 gtggtgatggtagtgttagtaagagaaccgaatcggctgatggttaggaagataaaattc 334 ||||| ||||| ||||||| ||||| ||||||| ||| || || | |||||| || || Sbjct: 833 gtggttatggtcgtgttagctagagacccgaatctgcttattgtcaagaagatgaagttt 774 Query: 335 tgacccacggcaccgcataggcagaacatgagaatgtccca 375 || || || |||||||||| ||| |||| ||||||||||| Sbjct: 773 tggcctactgcaccgcataaacagtacataagaatgtccca 733
>ref|NM_166164.2| Drosophila melanogaster Vacuolar H+ ATPase 44kD C subunit CG8048-RD, transcript variant D (Vha44), mRNA Length = 3055 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 ggtggtggtgatggtagtgtt 291 ||||||||||||||||||||| Sbjct: 628 ggtggtggtgatggtagtgtt 608
>ref|NM_166163.1| Drosophila melanogaster Vacuolar H+ ATPase 44kD C subunit CG8048-RC, transcript variant C (Vha44), mRNA Length = 2239 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 ggtggtggtgatggtagtgtt 291 ||||||||||||||||||||| Sbjct: 628 ggtggtggtgatggtagtgtt 608
>gb|AC091906.3| Homo sapiens chromosome 5 clone RP11-193P20, complete sequence Length = 195510 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 ggtggtggtgatggtagtgtt 291 ||||||||||||||||||||| Sbjct: 187484 ggtggtggtgatggtagtgtt 187464
>gb|AY059942.1| Arabidopsis thaliana Unknown protein (At1g14360; F14L17.13) mRNA, complete cds Length = 1304 Score = 42.1 bits (21), Expect = 1.8 Identities = 81/101 (80%) Strand = Plus / Minus Query: 275 gtggtgatggtagtgttagtaagagaaccgaatcggctgatggttaggaagataaaattc 334 ||||| ||||| ||||||| ||||| ||||||| ||| || || | |||||| || || Sbjct: 956 gtggttatggtcgtgttagctagagacccgaatctgcttattgtcaagaagatgaagttt 897 Query: 335 tgacccacggcaccgcataggcagaacatgagaatgtccca 375 || || || |||||||||| ||| |||| ||||||||||| Sbjct: 896 tggcctactgcaccgcataaacagtacataagaatgtccca 856
>gb|AF332450.1| Arabidopsis thaliana clone C00151 (e) unknown protein (At1g14360) mRNA, complete cds Length = 996 Score = 42.1 bits (21), Expect = 1.8 Identities = 81/101 (80%) Strand = Plus / Minus Query: 275 gtggtgatggtagtgttagtaagagaaccgaatcggctgatggttaggaagataaaattc 334 ||||| ||||| ||||||| ||||| ||||||| ||| || || | |||||| || || Sbjct: 833 gtggttatggtcgtgttagctagagacccgaatctgcttattgtcaagaagatgaagttt 774 Query: 335 tgacccacggcaccgcataggcagaacatgagaatgtccca 375 || || || |||||||||| ||| |||| ||||||||||| Sbjct: 773 tggcctactgcaccgcataaacagtacataagaatgtccca 733
>gb|AC092228.1|AC092228 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone BACR21J17, complete sequence Length = 174974 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 396 ggcaaaaactcaccgcctcaaaacc 420 |||| |||||||||||||||||||| Sbjct: 159202 ggcacaaactcaccgcctcaaaacc 159178
>gb|AC009356.3|AC009356 Drosophila melanogaster, chromosome 2R, region 52E-53A, BAC clone BACR25I17, complete sequence Length = 157835 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 ggtggtggtgatggtagtgtt 291 ||||||||||||||||||||| Sbjct: 91607 ggtggtggtgatggtagtgtt 91627
>emb|BX815894.1|CNS0AD6L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH15ZD08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1341 Score = 42.1 bits (21), Expect = 1.8 Identities = 81/101 (80%) Strand = Plus / Minus Query: 275 gtggtgatggtagtgttagtaagagaaccgaatcggctgatggttaggaagataaaattc 334 ||||| ||||| ||||||| ||||| ||||||| ||| || || | |||||| || || Sbjct: 919 gtggttatggtcgtgttagctagagacccgaatctgcttattgtcaagaagatgaagttt 860 Query: 335 tgacccacggcaccgcataggcagaacatgagaatgtccca 375 || || || |||||||||| ||| |||| ||||||||||| Sbjct: 859 tggcctactgcaccgcataaacagtacataagaatgtccca 819
>emb|BX816440.1|CNS0AD7D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH48ZD05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1346 Score = 42.1 bits (21), Expect = 1.8 Identities = 81/101 (80%) Strand = Plus / Minus Query: 275 gtggtgatggtagtgttagtaagagaaccgaatcggctgatggttaggaagataaaattc 334 ||||| ||||| ||||||| ||||| ||||||| ||| || || | |||||| || || Sbjct: 914 gtggttatggtcgtgttagctagagacccgaatctgcttattgtcaagaagatgaagttt 855 Query: 335 tgacccacggcaccgcataggcagaacatgagaatgtccca 375 || || || |||||||||| ||| |||| ||||||||||| Sbjct: 854 tggcctactgcaccgcataaacagtacataagaatgtccca 814
>gb|AC008230.4|AC008230 Drosophila melanogaster, chromosome 2R, region 53A-53C, BAC clone BACR17I17, complete sequence Length = 159640 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 ggtggtggtgatggtagtgtt 291 ||||||||||||||||||||| Sbjct: 68157 ggtggtggtgatggtagtgtt 68177
>gb|AC135112.5| Mus musculus BAC clone RP23-477F17 from chromosome unknown, complete sequence Length = 178498 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 ggtggtggtgatggtagtgtt 291 ||||||||||||||||||||| Sbjct: 156397 ggtggtggtgatggtagtgtt 156377
>gb|AY088469.1| Arabidopsis thaliana clone 6937 mRNA, complete sequence Length = 1288 Score = 42.1 bits (21), Expect = 1.8 Identities = 81/101 (80%) Strand = Plus / Minus Query: 275 gtggtgatggtagtgttagtaagagaaccgaatcggctgatggttaggaagataaaattc 334 ||||| ||||| ||||||| ||||| ||||||| ||| || || | |||||| || || Sbjct: 927 gtggttatggtcgtgttagctagagacccgaatctgcttattgtcaagaagatgaagttt 868 Query: 335 tgacccacggcaccgcataggcagaacatgagaatgtccca 375 || || || |||||||||| ||| |||| ||||||||||| Sbjct: 867 tggcctactgcaccgcataaacagtacataagaatgtccca 827
>gb|AF250341.1|AF250341 Arabidopsis thaliana putative UDP-galactose transporter MSS4 (F14L17.13) mRNA, partial cds Length = 691 Score = 42.1 bits (21), Expect = 1.8 Identities = 81/101 (80%) Strand = Plus / Minus Query: 275 gtggtgatggtagtgttagtaagagaaccgaatcggctgatggttaggaagataaaattc 334 ||||| ||||| ||||||| ||||| ||||||| ||| || || | |||||| || || Sbjct: 413 gtggttatggtcgtgttagctagagacccgaatctgcttattgtcaagaagatgaagttt 354 Query: 335 tgacccacggcaccgcataggcagaacatgagaatgtccca 375 || || || |||||||||| ||| |||| ||||||||||| Sbjct: 353 tggcctactgcaccgcataaacagtacataagaatgtccca 313
>gb|AC154008.1| Mus musculus 6 BAC RP24-470H20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 139613 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 164 atttggagagagaggccagaaaaga 188 |||||||| |||||||||||||||| Sbjct: 56395 atttggagggagaggccagaaaaga 56371
>emb|BX294183.17| Mouse DNA sequence from clone RP24-388B10 on chromosome X, complete sequence Length = 184943 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 ggtggtggtgatggtagtgtt 291 ||||||||||||||||||||| Sbjct: 124985 ggtggtggtgatggtagtgtt 125005
>gb|AC012188.2|F14L17 Sequence of BAC F14L17 from Arabidopsis thaliana chromosome 1, complete sequence Length = 111686 Score = 42.1 bits (21), Expect = 1.8 Identities = 81/101 (80%) Strand = Plus / Plus Query: 275 gtggtgatggtagtgttagtaagagaaccgaatcggctgatggttaggaagataaaattc 334 ||||| ||||| ||||||| ||||| ||||||| ||| || || | |||||| || || Sbjct: 42604 gtggttatggtcgtgttagctagagacccgaatctgcttattgtcaagaagatgaagttt 42663 Query: 335 tgacccacggcaccgcataggcagaacatgagaatgtccca 375 || || || |||||||||| ||| |||| ||||||||||| Sbjct: 42664 tggcctactgcaccgcataaacagtacataagaatgtccca 42704
>emb|AL929569.13| Mouse DNA sequence from clone RP23-325I3 on chromosome 2, complete sequence Length = 166963 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 ggtggtggtgatggtagtgtt 291 ||||||||||||||||||||| Sbjct: 30797 ggtggtggtgatggtagtgtt 30817
>gb|AE003644.4| Drosophila melanogaster chromosome 2L, section 53 of 83 of the complete sequence Length = 263306 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 396 ggcaaaaactcaccgcctcaaaacc 420 |||| |||||||||||||||||||| Sbjct: 51042 ggcacaaactcaccgcctcaaaacc 51018
>gb|AE003807.3| Drosophila melanogaster chromosome 2R, section 43 of 73 of the complete sequence Length = 258223 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 ggtggtggtgatggtagtgtt 291 ||||||||||||||||||||| Sbjct: 127222 ggtggtggtgatggtagtgtt 127242
>emb|CT030189.8| Mouse DNA sequence from clone RP24-402B23 on chromosome 12, complete sequence Length = 223910 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 ggtggtggtgatggtagtgttagta 295 ||||||||||||||| ||||||||| Sbjct: 198216 ggtggtggtgatggtggtgttagta 198240
>gb|AC144767.4| Mus musculus BAC clone RP23-82F8 from chromosome 6, complete sequence Length = 229027 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gagaggccagaaaagaccat 192 |||||||||||||||||||| Sbjct: 28924 gagaggccagaaaagaccat 28943
>gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7 of 8 of the complete sequence Length = 253151 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tcttccatttgagatatatt 166 |||||||||||||||||||| Sbjct: 207857 tcttccatttgagatatatt 207876
>gb|AC112938.11| Mus musculus chromosome 5, clone RP24-72E12, complete sequence Length = 235924 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 ttaggaagataaaattctga 337 |||||||||||||||||||| Sbjct: 170699 ttaggaagataaaattctga 170718
>gb|AC156396.8| Mus musculus 6 BAC RP24-303J2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 145666 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 gaggccagaaaagaccatca 194 |||||||||||||||||||| Sbjct: 3209 gaggccagaaaagaccatca 3190
>gb|AC122282.5| Mus musculus BAC clone RP23-240B12 from chromosome 5, complete sequence Length = 227388 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gggtggtggtgatggtagtg 289 |||||||||||||||||||| Sbjct: 169797 gggtggtggtgatggtagtg 169816
>gb|AC114676.7| Mus musculus chromosome 5, clone RP24-211H1, complete sequence Length = 153903 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gggtggtggtgatggtagtg 289 |||||||||||||||||||| Sbjct: 144797 gggtggtggtgatggtagtg 144778
>emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4, left end Length = 225394 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ttgcgggtggtggtgatggt 285 |||||||||||||||||||| Sbjct: 190285 ttgcgggtggtggtgatggt 190304
>gb|AC124588.4| Mus musculus BAC clone RP23-133F15 from chromosome 1, complete sequence Length = 141995 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 165 tttggagagagaggccagaaaaga 188 ||||||| |||||||||||||||| Sbjct: 74254 tttggagggagaggccagaaaaga 74231
>gb|AC123552.4| Mus musculus chromosome 7 clone RP24-396I18, complete sequence Length = 170951 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 tggtggtgatggtagtgttagtaa 296 ||||||||||||||||| |||||| Sbjct: 20778 tggtggtgatggtagtgatagtaa 20801
>gb|AC122304.4| Mus musculus BAC clone RP23-283G11 from 18, complete sequence Length = 184090 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 ggttaccactgataactgatgaga 248 ||||||| |||||||||||||||| Sbjct: 70445 ggttacctctgataactgatgaga 70468
>gb|AC121902.2| Mus musculus BAC clone RP24-168N14 from 8, complete sequence Length = 151290 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ggtggtggtgatggtagtgt 290 |||||||||||||||||||| Sbjct: 125610 ggtggtggtgatggtagtgt 125629
>gb|AC096909.10| Rattus norvegicus 8 BAC CH230-88B13 (Children's Hospital Oakland Research Institute) complete sequence Length = 241078 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ggtggtggtgatggtagtgt 290 |||||||||||||||||||| Sbjct: 136936 ggtggtggtgatggtagtgt 136955
>gb|AC023235.24| Homo sapiens 3 BAC RP11-484D18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169633 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 ataattacagtattgtatat 483 |||||||||||||||||||| Sbjct: 133729 ataattacagtattgtatat 133748
>gb|AC093176.6| Mus musculus Strain C57BL6/J chromosome 6 BAC, RP23-109H11, Complete Sequence, complete sequence Length = 192227 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gagaggccagaaaagaccat 192 |||||||||||||||||||| Sbjct: 117103 gagaggccagaaaagaccat 117084
>gb|AC163627.4| Mus musculus BAC clone RP23-341E13 from chromosome 6, complete sequence Length = 191467 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gagaggccagaaaagaccat 192 |||||||||||||||||||| Sbjct: 35081 gagaggccagaaaagaccat 35062
>gb|DQ057526.1| Antonospora locustae clone 2a09 mRNA sequence Length = 1922 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 caacacttccccattgctccatgg 218 ||||| |||||||||||||||||| Sbjct: 815 caacaattccccattgctccatgg 838
>gb|DQ057515.1| Antonospora locustae clone 1k16 mRNA sequence Length = 808 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 caacacttccccattgctccatgg 218 ||||| |||||||||||||||||| Sbjct: 472 caacaattccccattgctccatgg 495
>gb|DQ057501.1| Antonospora locustae clone 1f20 mRNA sequence Length = 1075 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 caacacttccccattgctccatgg 218 ||||| |||||||||||||||||| Sbjct: 716 caacaattccccattgctccatgg 739
>gb|AC159506.8| Mus musculus 6 BAC RP23-337N18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 191797 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ggtggtggtgatggtagtgt 290 |||||||||||||||||||| Sbjct: 108500 ggtggtggtgatggtagtgt 108519
>gb|AC112646.9| Homo sapiens 3 BAC RP11-687B8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 38601 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 ggtggtggtgatggtagtgttagt 294 ||||||||||||||||||| |||| Sbjct: 17675 ggtggtggtgatggtagtgatagt 17652
>gb|AC116603.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0015J03, complete sequence Length = 135940 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cccttctttctcttccattt 156 |||||||||||||||||||| Sbjct: 118875 cccttctttctcttccattt 118894
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 cacctctgggttctcccggcaaaa 402 ||||||||||| |||||||||||| Sbjct: 998154 cacctctgggtactcccggcaaaa 998131
>tpg|BK000933.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M329, complete sequence Length = 14006 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cccttctttctcttccattt 156 |||||||||||||||||||| Sbjct: 13934 cccttctttctcttccattt 13953
>emb|AL731773.20| Mouse DNA sequence from clone RP23-152G20 on chromosome X, complete sequence Length = 162215 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 gaggccagaaaagaccatca 194 |||||||||||||||||||| Sbjct: 50703 gaggccagaaaagaccatca 50722
>gb|AC091742.5| Homo sapiens BAC clone RP11-1220K2 from 7, complete sequence Length = 191041 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 gtggtggtgatggtagtgttagta 295 |||||||||||||||||| ||||| Sbjct: 45508 gtggtggtgatggtagtgatagta 45531
>gb|AC093607.3| Homo sapiens BAC clone RP11-654J13 from 4, complete sequence Length = 143993 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 131 tctctgcccttctttctcttccat 154 ||||| |||||||||||||||||| Sbjct: 72647 tctctccccttctttctcttccat 72624
>emb|BX682556.5| Zebrafish DNA sequence from clone DKEY-105I19 in linkage group 3, complete sequence Length = 244555 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 aaatcaaaatgtacttataagaac 112 |||||||||||||||||| ||||| Sbjct: 101347 aaatcaaaatgtacttattagaac 101370
>gb|AC068807.21| Mus musculus 11 BAC RP23-346P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 208135 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gggtggtggtgatggtagtg 289 |||||||||||||||||||| Sbjct: 188604 gggtggtggtgatggtagtg 188585
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cccttctttctcttccattt 156 |||||||||||||||||||| Sbjct: 4173585 cccttctttctcttccattt 4173566
>emb|BX817240.1|CNS0AD4W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH95ZA06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1263 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 478 gtatatggttccccagaggttcatgccaagcattat 513 ||||||||||||||| | |||||| || |||||||| Sbjct: 726 gtatatggttccccataagttcattcccagcattat 691
>gb|AC115115.4| Homo sapiens BAC clone RP11-812M14 from 2, complete sequence Length = 124457 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 ggtggtggtgatggtagtgttagt 294 ||||||||||||||| |||||||| Sbjct: 93188 ggtggtggtgatggtggtgttagt 93165
>gb|AC103595.2| Homo sapiens chromosome 1 clone RP11-415P10, complete sequence Length = 122000 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 ttccccattgctccatggacagtg 224 ||||||||||| |||||||||||| Sbjct: 99141 ttccccattgccccatggacagtg 99164
>gb|AC084208.5| Homo sapiens BAC clone RP11-228P15 from 2, complete sequence Length = 141130 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 ggtggtggtgatggtagtgttagt 294 ||||||||||||||||||| |||| Sbjct: 46722 ggtggtggtgatggtagtgatagt 46745
>gb|AC090652.32| Mus musculus strain C57BL/6J chromosome 7 clone rp23-116a10, complete sequence Length = 228147 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 tggtggtgatggtagtgttagtaa 296 ||||||||||||||||| |||||| Sbjct: 166584 tggtggtgatggtagtgatagtaa 166561
>emb|BX004764.8| Zebrafish DNA sequence from clone DKEY-162L4 in linkage group 3, complete sequence Length = 238651 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 aaatcaaaatgtacttataagaac 112 |||||||||||||||||| ||||| Sbjct: 195567 aaatcaaaatgtacttatcagaac 195590
>emb|AL954662.13| Mouse DNA sequence from clone RP23-348L16 on chromosome 2, complete sequence Length = 132427 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 ccatttgagatatatttgga 170 |||||||||||||||||||| Sbjct: 30171 ccatttgagatatatttgga 30190
>emb|AL954212.1| Pan troglodytes chromosome 22 clone RP43-043L10 map 22q22.11, complete sequence Length = 192328 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 aacacttccccattgctcca 215 |||||||||||||||||||| Sbjct: 119160 aacacttccccattgctcca 119141
>dbj|BS000126.1| Pan troglodytes chromosome 22 clone:PTB-128A24, map 22, complete sequences Length = 207747 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 ggtggtggtgatggtagtgttagt 294 ||||||||||||||||||| |||| Sbjct: 98900 ggtggtggtgatggtagtgatagt 98923
>gb|AC115020.11| Mus musculus chromosome 1, clone RP24-231D14, complete sequence Length = 188569 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 gtggtggtgatggtagtgtt 291 |||||||||||||||||||| Sbjct: 125113 gtggtggtgatggtagtgtt 125132
>gb|AC157824.1| Mus musculus BAC clone RP23-265E4 from 1, complete sequence Length = 153577 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 tttggagagagaggccagaaaaga 188 ||||||| |||||||||||||||| Sbjct: 13532 tttggagggagaggccagaaaaga 13555
>emb|CR388073.11| Zebrafish DNA sequence from clone CH211-197K16 in linkage group 25, complete sequence Length = 131786 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 aatgtaaacctcttttctataatt 25 ||||||||||| |||||||||||| Sbjct: 37591 aatgtaaacctgttttctataatt 37614
>gb|AC153991.3| Mus musculus 6 BAC RP24-541D10 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 202289 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ggtggtggtgatggtagtgt 290 |||||||||||||||||||| Sbjct: 16465 ggtggtggtgatggtagtgt 16484
>dbj|AP004147.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-785K22, complete sequence Length = 97120 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 ggtggtggtgatggtagtgttagt 294 ||||||||||||||||||| |||| Sbjct: 84010 ggtggtggtgatggtagtggtagt 83987
>gb|AC005243.1|AC005243 Homo sapiens chromosome 17, clone hRPK.1124_B_17, complete sequence Length = 175609 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 ggtggtggtgatggtagtgttagt 294 ||||||||||||||||||| |||| Sbjct: 170223 ggtggtggtgatggtagtgatagt 170200
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cccttctttctcttccattt 156 |||||||||||||||||||| Sbjct: 4174406 cccttctttctcttccattt 4174387
>gb|AC127255.4| Mus musculus BAC clone RP24-291I7 from 5, complete sequence Length = 153492 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gggtggtggtgatggtagtg 289 |||||||||||||||||||| Sbjct: 79410 gggtggtggtgatggtagtg 79391
>emb|AL122015.17|HSDJ8L15 Human DNA sequence from clone RP1-8L15 on chromosome 11p13, complete sequence Length = 111590 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gggtggtggtgatggtagtg 289 |||||||||||||||||||| Sbjct: 33647 gggtggtggtgatggtagtg 33628
>gb|AC135861.5| Mus musculus BAC clone RP23-179J18 from 6, complete sequence Length = 202869 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 gaggccagaaaagaccatca 194 |||||||||||||||||||| Sbjct: 20671 gaggccagaaaagaccatca 20690
>gb|AC127288.4| Mus musculus BAC clone RP23-358J11 from 8, complete sequence Length = 210710 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 ggtggtggtgatggtagtgttagt 294 ||||||||||||||||||| |||| Sbjct: 60459 ggtggtggtgatggtagtggtagt 60482
>gb|AC156500.2| Mus musculus BAC clone RP24-126J12 from chromosome 9, complete sequence Length = 152842 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 ggtggtggtgatggtagtgt 290 |||||||||||||||||||| Sbjct: 92113 ggtggtggtgatggtagtgt 92094
>emb|AL591436.8| Mouse DNA sequence from clone RP23-434F13 on chromosome 11, complete sequence Length = 187006 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gggtggtggtgatggtagtg 289 |||||||||||||||||||| Sbjct: 69174 gggtggtggtgatggtagtg 69193
>dbj|AP000352.2| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB1561E1 Length = 152244 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 tggtggtgatggtagtgttagtaa 296 ||||||||||||| |||||||||| Sbjct: 47669 tggtggtgatggtcgtgttagtaa 47692 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,423,522 Number of Sequences: 3902068 Number of extensions: 5423522 Number of successful extensions: 151066 Number of sequences better than 10.0: 113 Number of HSP's better than 10.0 without gapping: 113 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 150550 Number of HSP's gapped (non-prelim): 515 length of query: 518 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 495 effective length of database: 17,143,297,704 effective search space: 8485932363480 effective search space used: 8485932363480 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)