>AMS2_SCHPO (Q9URT4) CENP-A multicopy suppressor protein 2|
          Length = 697

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
 Frame = +2

Query: 239 SPHKHQQAGQANVANTEMDHQFHHSNTHLSCHVAD-----ILHGHRYLWSPLADPSCSLS 403
           SP +     + NV   E+D  FH SN  +SC         IL     L  P  DP CS S
Sbjct: 208 SPSRPSALAETNVEELELDSLFHASN-DISCSATSFSEPYILDHQAALDHPATDPVCSAS 266

>CHD3_CAEEL (Q22516) Chromodomain helicase-DNA-binding protein 3 homolog|
           (CHD-3)
          Length = 1787

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 23/55 (41%), Positives = 31/55 (56%)
 Frame = +1

Query: 133 HMTVHCQSIHQVNRWLFLSSIHPLFLLPQSCTMELVTPQTSAGRSSKRRKYRNGS 297
           HMT H +SI +  R  F+    P+ + PQ    E + PQ +  RSS RRK R+GS
Sbjct: 148 HMTAHGKSIQKQQRAKFVPV--PVPVTPQ----EKIIPQKT--RSSARRKRRDGS 194

>KRA92_HUMAN (Q9BYQ4) Keratin-associated protein 9-2 (Keratin-associated protein|
           9.2) (Ultrahigh sulfur keratin-associated protein 9.2)
          Length = 174

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = +2

Query: 371 SPLADPSC--SLSL*NSAWMTSTIMASSGSCSGMSTCKEPCLMSSWFNACC 517
           SP   P+C  +     + W  +T+     +CS  S C+  C +SS    CC
Sbjct: 6   SPCCQPTCCRTTCCRTTCWKPTTVT----TCSSTSCCQPACCVSSCCQPCC 52

>KRA93_HUMAN (Q9BYQ3) Keratin-associated protein 9-3 (Keratin-associated protein|
           9.3) (Ultrahigh sulfur keratin-associated protein 9.3)
          Length = 159

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +2

Query: 371 SPLADPSCSLSL*NSAWMTSTIMASSGSCSGMSTCKEPCLMSSWFNACC 517
           SP   P+C  +   + W  +T+     +CS    C+  C +SS    CC
Sbjct: 6   SPCCQPTCCRT---TCWQPTTVT----TCSSTPCCQPSCCVSSCCQPCC 47

>ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1183

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +2

Query: 284  TEMDHQFHHSNTHLSCHVADILHGHRYLWSPLADPSCS 397
            T   HQ  H ++HL  H  D +H       PL DP  S
Sbjct: 1041 TPHHHQHSHIHSHLHLHQQDAIHAASASVHPLIDPLAS 1078

>ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1186

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +2

Query: 284  TEMDHQFHHSNTHLSCHVADILHGHRYLWSPLADPSCS 397
            T   HQ  H ++HL  H  D +H       PL DP  S
Sbjct: 1044 TPHHHQHSHIHSHLHLHQQDAIHAASASVHPLIDPLAS 1081

>ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1185

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +2

Query: 284  TEMDHQFHHSNTHLSCHVADILHGHRYLWSPLADPSCS 397
            T   HQ  H ++HL  H  D +H       PL DP  S
Sbjct: 1043 TPHHHQHSHIHSHLHLHQQDAIHAASASVHPLIDPLAS 1080

>MT1C_SHEEP (P09578) Metallothionein-1C (MT-1C) (Metallothionein-IC) (MT-IC)|
          Length = 61

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +2

Query: 383 DPSCSLSL*NSAWMTSTIMASSGSCSGMSTCKEPCLMSSWFNACCS 520
           DP+CS S             SS SC+G  TCK  C   S   +CCS
Sbjct: 2   DPNCSCST-----------GSSCSCAGSCTCK-ACRCPSCKKSCCS 35

>KRA98_HUMAN (Q9BYQ0) Keratin-associated protein 9-8 (Keratin-associated protein|
           9.8) (Ultrahigh sulfur keratin-associated protein 9.8)
          Length = 159

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +2

Query: 371 SPLADPSCSLSL*NSAWMTSTIMASSGSCSGMSTCKEPCLMSSWFNACC 517
           SP   P+C  +   + W  +T+     +CS    C+  C +SS    CC
Sbjct: 6   SPCCQPTCCRT---TCWKPTTVT----TCSSTPCCQPSCCVSSCCQPCC 47

>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)|
          Length = 508

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +2

Query: 218 SLAPWNWSPHKHQQAGQAN--VANTEMDHQFHHSNTHLSCHVA 340
           +L P +  PH+HQ          + + +H  HHS++HL  H A
Sbjct: 283 TLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPA 325

>YOR4_EAVBU (P28994) Hypothetical 17.2 kDa protein (ORF4)|
          Length = 152

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -3

Query: 271 CLTGLLMFVG*PVPWC 224
           C++GLL+FVG P  WC
Sbjct: 6   CISGLLLFVGLPCCWC 21

>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)|
           (Fragment)
          Length = 353

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +2

Query: 218 SLAPWNWSPHKHQQAGQAN--VANTEMDHQFHHSNTHLSCHVA 340
           +L P +  PH+HQ          + + +H  HHS++HL  H A
Sbjct: 128 TLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPA 170


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,172,601
Number of Sequences: 219361
Number of extensions: 1693904
Number of successful extensions: 4509
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4488
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4027872870
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)