Clone Name | rbart28e03 |
---|---|
Clone Library Name | barley_pub |
>CPPM_ARATH (O49290) Putative carboxyvinyl-carboxyphosphonate phosphorylmutase| (EC 2.7.8.23) (Carboxyphosphonoenolpyruvate phosphonomutase) (CPEP phosphonomutase) Length = 335 Score = 54.7 bits (130), Expect = 2e-07 Identities = 28/85 (32%), Positives = 51/85 (60%), Gaps = 2/85 (2%) Frame = -3 Query: 551 KMANMLEGGGKTPILTPAELKEIGFSLVVYPLSLIGVAMRAMEDALLAIKGGGVPPP--A 378 ++ NM+EGG TP+ TP ELKE+GF L+V+PL+ + + RA+ D L +K G Sbjct: 241 RVCNMIEGG-VTPLHTPDELKEMGFHLIVHPLTALYASTRALVDVLKTLKENGSTRDHLQ 299 Query: 377 SLPSFQEIKDTLGFNRYYQEDKQYT 303 + +F+E + + +++ + +Y+ Sbjct: 300 KMATFEEFNSLVDLDSWFELEARYS 324
>CPPM_DIACA (Q05957) Putative carboxyvinyl-carboxyphosphonate phosphorylmutase| (EC 2.7.8.23) (Carboxyphosphonoenolpyruvate phosphonomutase) (CPEP phosphonomutase) (PSR132) Length = 318 Score = 50.1 bits (118), Expect = 4e-06 Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%) Frame = -3 Query: 551 KMANMLEGGGKTPILTPAELKEIGFSLVVYPLSLIGVAMRAMEDALLAIKGGGVPPP--A 378 ++ANM+EGG KTP+ TP E KE+GF L+ + L+ + RA+ + + +K G Sbjct: 228 RIANMIEGG-KTPLHTPEEFKEMGFHLIAHSLTAVYATARALVNIMKILKEKGTTRDDLD 286 Query: 377 SLPSFQEIKDTLGFNRYYQEDKQY 306 + +F E + + +Y+ + ++ Sbjct: 287 QMATFSEFNELISLESWYEMESKF 310
>CPPM_BACHD (Q9Z9T7) Putative carboxyvinyl-carboxyphosphonate phosphorylmutase| (EC 2.7.8.23) (Carboxyphosphonoenolpyruvate phosphonomutase) (CPEP phosphonomutase) Length = 300 Score = 45.1 bits (105), Expect = 1e-04 Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 2/81 (2%) Frame = -3 Query: 548 MANMLEGGGKTPILTPAELKEIGFSLVVYPLSLIGVAMRAMEDALLAIKGGGVPPPA--S 375 +ANM E G KTP++T L+ GF +V+YP++ + VA +A E IK G Sbjct: 212 LANMTEFG-KTPLMTAGGLQNAGFQMVIYPVTSLRVAAKAYERIFQLIKDEGTQEAGIED 270 Query: 374 LPSFQEIKDTLGFNRYYQEDK 312 + + +E+ +T+ ++ + DK Sbjct: 271 MQTRKELYETISYDDFEALDK 291
>PRPB1_CORGL (Q8NSH8) Probable methylisocitrate lyase 1 (EC 4.1.3.30)| (2-methylisocitrate lyase 1) Length = 305 Score = 43.1 bits (100), Expect = 5e-04 Identities = 23/52 (44%), Positives = 35/52 (67%) Frame = -3 Query: 548 MANMLEGGGKTPILTPAELKEIGFSLVVYPLSLIGVAMRAMEDALLAIKGGG 393 +ANM E G KT +L+ L+EIG++ V+YP++ + +AM +E AL IK G Sbjct: 214 LANMTEFG-KTTLLSADVLEEIGYNAVIYPVTTLRIAMGQVEQALAEIKEHG 264
>PRPB2_CORGL (Q8NSL2) Probable methylisocitrate lyase 2 (EC 4.1.3.30)| (2-methylisocitrate lyase 2) Length = 307 Score = 42.7 bits (99), Expect = 7e-04 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 2/93 (2%) Frame = -3 Query: 548 MANMLEGGGKTPILTPAELKEIGFSLVVYPLSLIGVAMRAMEDALLAIKGGGVPPP--AS 375 +ANM E G KT +L L++IG++ V+YP++L+ +AM +E AL I G+ Sbjct: 214 LANMTEFG-KTELLPAQLLEDIGYNAVIYPVTLLRIAMGQVEQALGDIANTGIQTDWVDR 272 Query: 374 LPSFQEIKDTLGFNRYYQEDKQYTVPQAQPSTP 276 + + + L +N Y D+Q A P Sbjct: 273 MQHRSRLYELLRYNEYNAFDQQVFTYSADSYKP 305
>CPPM_STRHY (P11435) Carboxyvinyl-carboxyphosphonate phosphorylmutase (EC| 2.7.8.23) (Carboxyphosphonoenolpyruvate phosphonomutase) (CPEP phosphonomutase) Length = 294 Score = 42.0 bits (97), Expect = 0.001 Identities = 20/32 (62%), Positives = 26/32 (81%) Frame = -3 Query: 548 MANMLEGGGKTPILTPAELKEIGFSLVVYPLS 453 +ANM+EGG KTP LT EL+ IG++L +YPLS Sbjct: 205 LANMVEGG-KTPWLTTKELESIGYNLAIYPLS 235
>CPPM_AERPE (Q9YFM7) Putative carboxyvinyl-carboxyphosphonate phosphorylmutase| (EC 2.7.8.23) (Carboxyphosphonoenolpyruvate phosphonomutase) (CPEP phosphonomutase) Length = 318 Score = 41.6 bits (96), Expect = 0.002 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 2/82 (2%) Frame = -3 Query: 548 MANMLEGGGKTPILTPAELKEIGFSLVVYPLSLIGVAMRAMEDALLAIKGGGVPPPA--S 375 +ANM E G KTP +T + +E G+ +V++P++ +++A E L I G Sbjct: 220 LANMTEFG-KTPYITVDQFREAGYKIVIFPVTTFRASLKASETVLREIMEKGTQKDILDK 278 Query: 374 LPSFQEIKDTLGFNRYYQEDKQ 309 L + E D +G++ Y + D + Sbjct: 279 LYTRTEFYDLIGYHDYEKRDAE 300
>CPPM_BACSU (P54528) Putative carboxyvinyl-carboxyphosphonate phosphorylmutase| (EC 2.7.8.23) (Carboxyphosphonoenolpyruvate phosphonomutase) (CPEP phosphonomutase) Length = 301 Score = 39.3 bits (90), Expect = 0.007 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 2/81 (2%) Frame = -3 Query: 548 MANMLEGGGKTPILTPAELKEIGFSLVVYPLSLIGVAMRAMEDALLAIKGGGVPPPA--S 375 +ANM E G KTP E +++GF +V+YP++ + A +A E +K G Sbjct: 212 LANMTEFG-KTPYYRADEFEDMGFHMVIYPVTSLRAAAKACERMFGLMKEHGSQKEGLHD 270 Query: 374 LPSFQEIKDTLGFNRYYQEDK 312 + + +E+ DT+ + Y DK Sbjct: 271 MQTRKELYDTISYYDYEALDK 291
>PRPB_VIBCH (Q9KSC2) Methylisocitrate lyase (EC 4.1.3.30) (2-methylisocitrate| lyase) Length = 308 Score = 31.6 bits (70), Expect = 1.6 Identities = 23/89 (25%), Positives = 42/89 (47%) Frame = -3 Query: 548 MANMLEGGGKTPILTPAELKEIGFSLVVYPLSLIGVAMRAMEDALLAIKGGGVPPPASLP 369 +AN+ E G +TP+ + +L + +V+YPLS +A E+ + G A L Sbjct: 222 LANITEFG-QTPLYSGEQLAAVNVDMVLYPLSAFRAMNKAAENVYRHLLEHG-NQEALLD 279 Query: 368 SFQEIKDTLGFNRYYQEDKQYTVPQAQPS 282 Q K+ + Y++ + + +QPS Sbjct: 280 QMQTRKELYAYLHYHEYEDKLDQLFSQPS 308
>PRPB_ECOLI (P77541) Methylisocitrate lyase (EC 4.1.3.30) (2-methylisocitrate| lyase) Length = 295 Score = 31.2 bits (69), Expect = 2.0 Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 2/79 (2%) Frame = -3 Query: 548 MANMLEGGGKTPILTPAELKEIGFSLVVYPLSLIGVAMRAMEDALLAIKGGGVPPPA--S 375 +AN+ E G TP+ T EL+ ++ +YPLS RA E ++ G + Sbjct: 207 LANITEFGA-TPLFTTDELRSAHVAMALYPLSAFRAMNRAAEHVYNVLRQEGTQKSVIDT 265 Query: 374 LPSFQEIKDTLGFNRYYQE 318 + + E+ +++ + +Y ++ Sbjct: 266 MQTRNELYESINYYQYEEK 284
>CC2H1_TRYBB (P38973) Cell division control protein 2 homolog 1 (EC 2.7.11.22)| Length = 301 Score = 30.8 bits (68), Expect = 2.7 Identities = 21/91 (23%), Positives = 41/91 (45%) Frame = +1 Query: 37 LTPGIQVC*HQKQHTFTNISPPHLQLAKIVCLKINTIALYHCSEVQISNFQKQMDTDGSV 216 L G++ C H++ ++ PP+L +++ LK+ L + + F +++ V Sbjct: 111 LLSGVRFC-HERNVLHRDLKPPNLLISREKELKLADFGLGRAFGIPVKKFTQEV-----V 164 Query: 217 DTWMPFPYANGDAPFYGLPLGVDGWACGTVY 309 W P + YG P VD W+ G ++ Sbjct: 165 TLWYRSPDVLLGSTQYGTP--VDIWSVGCIF 193
>PRPB_SALTY (Q56062) Methylisocitrate lyase (EC 4.1.3.30) (2-methylisocitrate| lyase) Length = 294 Score = 30.4 bits (67), Expect = 3.5 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = -3 Query: 548 MANMLEGGGKTPILTPAELKEIGFSLVVYPLSLIGVAMRAMEDALLAIKGGG 393 +AN+ E G TP+ T EL+ ++ +YPLS RA E ++ G Sbjct: 207 LANITEFGA-TPLFTTDELRSAHVAMALYPLSAFRAMNRAAEKVYTVLRQEG 257
>VASP_HUMAN (P50552) Vasodilator-stimulated phosphoprotein (VASP)| Length = 379 Score = 30.0 bits (66), Expect = 4.5 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = -3 Query: 428 MEDALLAIKGGGVPPPASLPSF 363 M AL A++GGG PPP +LP++ Sbjct: 105 MASALEALEGGGPPPPPALPTW 126 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,533,158 Number of Sequences: 219361 Number of extensions: 2062528 Number of successful extensions: 5264 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 5076 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5259 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)