>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds
          Length = 3284914

 Score = 44.1 bits (22), Expect = 0.058
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 54      ggcaaaaacgcctctctccaaaacac 79
               ||||||||| ||||||||||||||||
Sbjct: 2573157 ggcaaaaacccctctctccaaaacac 2573132

>gb|AC142103.3| Mus musculus BAC clone RP24-287E15 from chromosome 17, complete
             sequence
          Length = 175787

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 63    gcctctctccaaaacacgg 81
             |||||||||||||||||||
Sbjct: 92956 gcctctctccaaaacacgg 92974

>emb|CR513784.8| Zebrafish DNA sequence from clone CH211-286B4 in linkage group 15,
             complete sequence
          Length = 166308

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 61    acgcctctctccaaaacac 79
             |||||||||||||||||||
Sbjct: 86629 acgcctctctccaaaacac 86611

>gb|AC148670.1| Macaca mulatta Major Histocompatibility Complex BAC MMU063G23, complete
             sequence
          Length = 189655

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 54    ggcaaaaacgcctctctccaaaa 76
             ||||||||| |||||||||||||
Sbjct: 58686 ggcaaaaacccctctctccaaaa 58708

>dbj|AP006240.1| Homo sapiens genomic DNA, chromosome 3, clone:RP11-359D8, complete
             sequence
          Length = 193414

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 56    caaaaacgcctctctccaa 74
             |||||||||||||||||||
Sbjct: 73659 caaaaacgcctctctccaa 73641

>dbj|AP000494.1| Homo sapiens genomic DNA, chromosome 3p21.3, clone:301 to 308,
             anti-oncogene region, section 2/5
          Length = 200000

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 56    caaaaacgcctctctccaa 74
             |||||||||||||||||||
Sbjct: 70885 caaaaacgcctctctccaa 70867


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 299,050
Number of Sequences: 3902068
Number of extensions: 299050
Number of successful extensions: 13346
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 13332
Number of HSP's gapped (non-prelim): 14
length of query: 85
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 64
effective length of database: 17,151,101,840
effective search space: 1097670517760
effective search space used: 1097670517760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)