>PAP3_ORYSA (Q7XBW5) Probable plastid-lipid associated protein 3, chloroplast|
           precursor
          Length = 374

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -1

Query: 289 DEDKEVAALERQEEVEACAAEIESGSDKVFRSILHTRVALLNIQTQ 152
           +ED E    ER+EE++ C  +   GSD  FR+    R  +L + TQ
Sbjct: 138 EEDNEE---ERREELKRCLVDTVYGSDLGFRASSEVRGEVLELVTQ 180

>2DMB_MOUSE (P35737) Class II histocompatibility antigen, M beta 1 chain|
           precursor (H2-M beta 1 chain)
          Length = 261

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 135 IQNALPSLA*RSPFFWTIIVILSKPPSVHTNRST 34
           +QN LP  A  +  FW  +   ++PPSV   ++T
Sbjct: 90  LQNGLPDCASHTQPFWNALTHRTRPPSVRVAQTT 123

>RAD50_HALVO (P62133) DNA double-strand break repair rad50 ATPase|
          Length = 893

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -1

Query: 310 MRAKASSDEDKEVAALERQEEVEACAAEIESGSD 209
           + AK S+DE K     ER  E++A A E+ES  D
Sbjct: 263 LTAKISADETKRDDLSERVRELDAAADELESDID 296


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,544,813
Number of Sequences: 219361
Number of extensions: 713455
Number of successful extensions: 2089
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2088
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)