>ATC9_SCHPO (O74431) Probable cation-transporting ATPase C1672.11c (EC 3.6.3.-)|
          Length = 1315

 Score = 32.3 bits (72), Expect = 0.71
 Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 7/113 (6%)
 Frame = +1

Query: 46  AIKNFRHSTLHKSLHESVSGYSLQHQQYEIRLHADAAGLSAQE*EGSGESNDQQTLPRTA 225
           ++ +F H TL  S   SVS +S+ + Q E  L+    G      E    S D Q+L R  
Sbjct: 49  SVSSFHHQTLRPSSDASVSQFSMDYLQSEYNLNRYNDG------ESIAASRDYQSLLRDN 102

Query: 226 SASFWS-------CAWEDLHWHTKNCSVLRTRNLAKALL*ERRPWGLSRSGMC 363
            +  +S          E+L+ H     VLR  ++ +A        GLS  G C
Sbjct: 103 GSGVYSDEEEITEMMLEELNIH----PVLRRESVGEAA-------GLSEDGCC 144

>ACS1_CANGA (Q6FLU2) Acetyl-coenzyme A synthetase 1 (EC 6.2.1.1) (Acetate--CoA|
           ligase 1) (Acyl-activating enzyme 1)
          Length = 704

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +1

Query: 7   GKLHSCYFCLVFHAIKNFRHSTLHKSLHESVSGYSLQHQQ 126
           G+L++CY C+  HA+K    + +     E   GYS+ +++
Sbjct: 120 GQLNTCYNCVDRHALKTPNKTAIIYEADEPGEGYSMSYKE 159

>ENV_CAEVC (P31626) Env polyprotein (Coat polyprotein) [Contains: Leader|
            peptide; Surface protein; Transmembrane protein]
          Length = 966

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = +1

Query: 85   LHESVSGYSLQHQQYEIRLHADAAGLSAQE*EGSGESNDQQTLPRTASASFWSCAWE 255
            ++ ++S  + Q     +   AD AG +    +G  ES++ +T  R      WS AWE
Sbjct: 835  IYRTLSTPTYQRVTVIMETRADVAGENQDFGDGLEESDNSETSERVTVQKAWSRAWE 891

>ENV_CAEVG (P31627) Env polyprotein precursor (Coat polyprotein) [Contains:|
            Leader peptide; Surface protein; Transmembrane protein]
          Length = 942

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 21/79 (26%), Positives = 34/79 (43%)
 Frame = +1

Query: 85   LHESVSGYSLQHQQYEIRLHADAAGLSAQE*EGSGESNDQQTLPRTASASFWSCAWEDLH 264
            ++ ++S  + Q     +   AD AG +    +G  ES+D +T  +      WS AWE   
Sbjct: 833  IYRTLSTPTYQRVTVIMEKRADVAGENQDFGDGLEESDDSKTDQKVTVQKAWSRAWE--L 890

Query: 265  WHTKNCSVLRTRNLAKALL 321
            W          R+L K L+
Sbjct: 891  WQNSPWKEPWKRSLLKLLI 909

>TR11B_RAT (O08727) Tumor necrosis factor receptor superfamily member 11B|
           precursor (Osteoprotegerin)
          Length = 401

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 284 VYFAPET*PKLSCRSGVPGDYLDQACVSKRR 376
           +++ PET  +L C    PG YL Q C  +R+
Sbjct: 29  LHYDPETGRQLLCDKCAPGTYLKQHCTVRRK 59

>TR11B_MOUSE (O08712) Tumor necrosis factor receptor superfamily member 11B|
           precursor (Osteoprotegerin) (Osteoclastogenesis
           inhibitory factor)
          Length = 401

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 284 VYFAPET*PKLSCRSGVPGDYLDQACVSKRR 376
           +++ PET  +L C    PG YL Q C  +R+
Sbjct: 29  LHYDPETGHQLLCDKCAPGTYLKQHCTVRRK 59


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,461,896
Number of Sequences: 219361
Number of extensions: 1543914
Number of successful extensions: 3638
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3638
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)