ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart28c12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY104555.1| Zea mays PCO093282 mRNA sequence Length = 721 Score = 105 bits (53), Expect = 1e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 261 cggacggatgccagggagaagacgaagccggcgaactgcggcggagggcgcaccacggtc 320 |||||||| || | |||||||||||| ||||| |||| |||||| ||||| ||||||||| Sbjct: 158 cggacggacgcgacggagaagacgaatccggcaaactccggcggcgggcggaccacggtc 99 Query: 321 cagttcttggacttgacgtcgaacacccacagcgcgt 357 ||| |||||| |||||||||||||||||| ||||||| Sbjct: 98 cagctcttggtcttgacgtcgaacacccagagcgcgt 62
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 275 ggagaagacgaagccggcgaactgcggcggagggcgcaccacggtccagttcttggactt 334 ||||||| |||| |||||||||| || || ||||| ||||||||||||||||||| ||| Sbjct: 19354 ggagaaggcgaatccggcgaactctggaggtgggcgaaccacggtccagttcttggtctt 19295 Query: 335 gacgtcgaacaccca 349 |||||||||||||| Sbjct: 19294 tacgtcgaacaccca 19280 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 386 ctcgatggcgccggtcactaccacgcgctcgccgccgccgacg 428 ||||||||||||||| || || ||||||||||||||||||||| Sbjct: 19246 ctcgatggcgccggtgacgacgacgcgctcgccgccgccgacg 19204
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 275 ggagaagacgaagccggcgaactgcggcggagggcgcaccacggtccagttcttggactt 334 ||||||| |||| |||||||||| || || ||||| ||||||||||||||||||| ||| Sbjct: 7797601 ggagaaggcgaatccggcgaactctggaggtgggcgaaccacggtccagttcttggtctt 7797660 Query: 335 gacgtcgaacaccca 349 |||||||||||||| Sbjct: 7797661 tacgtcgaacaccca 7797675 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 386 ctcgatggcgccggtcactaccacgcgctcgccgccgccgacg 428 ||||||||||||||| || || ||||||||||||||||||||| Sbjct: 7797709 ctcgatggcgccggtgacgacgacgcgctcgccgccgccgacg 7797751
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 275 ggagaagacgaagccggcgaactgcggcggagggcgcaccacggtccagttcttggactt 334 ||||||| |||| |||||||||| || || ||||| ||||||||||||||||||| ||| Sbjct: 7867688 ggagaaggcgaatccggcgaactctggaggtgggcgaaccacggtccagttcttggtctt 7867747 Query: 335 gacgtcgaacaccca 349 |||||||||||||| Sbjct: 7867748 tacgtcgaacaccca 7867762 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 386 ctcgatggcgccggtcactaccacgcgctcgccgccgccgacg 428 ||||||||||||||| || || ||||||||||||||||||||| Sbjct: 7867796 ctcgatggcgccggtgacgacgacgcgctcgccgccgccgacg 7867838
>gb|AY104836.1| Zea mays PCO087354 mRNA sequence Length = 805 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 261 cggacggatgccagggagaagacgaagccggcgaactgcggcggagggcgcaccacggtc 320 |||||||| || | |||||| |||||||||||||||| |||||| ||| ||||||||||| Sbjct: 159 cggacggacgcaacggagaacacgaagccggcgaactccggcggcgggggcaccacggtc 100 Query: 321 cagttcttggacttgacgtcgaacaccca 349 ||| ||||| | | || ||||||||||| Sbjct: 99 cagctcttgctcgtcacatcgaacaccca 71
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 408 acgcgctcgccgccgccgacgg 429 |||||||||||||||||||||| Sbjct: 1905798 acgcgctcgccgccgccgacgg 1905819
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 408 acgcgctcgccgccgccgacgg 429 |||||||||||||||||||||| Sbjct: 1524102 acgcgctcgccgccgccgacgg 1524081
>gb|AC034110.13| Homo sapiens chromosome 18, clone RP11-111H3, complete sequence Length = 167954 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 18 tagttattttttgttgttttct 39 |||||||||||||||||||||| Sbjct: 141009 tagttattttttgttgttttct 140988
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 408 acgcgctcgccgccgccgacgg 429 |||||||||||||||||||||| Sbjct: 1411190 acgcgctcgccgccgccgacgg 1411169
>emb|AL627127.20| Mouse DNA sequence from clone RP23-360O1 on chromosome 4, complete sequence Length = 188629 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tctagttattttttgttgtttt 37 |||||||||||||||||||||| Sbjct: 127552 tctagttattttttgttgtttt 127573
>gb|AC157472.3| Medicago truncatula chromosome 7 BAC clone mth2-41h16, complete sequence Length = 114287 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 201 ctagtagtagtagtagtcttct 222 |||||||||||||||||||||| Sbjct: 38908 ctagtagtagtagtagtcttct 38887
>gb|AC147479.17| Mus musculus chromosome 17, clone RP24-178C19, complete sequence Length = 178820 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 agttattttttgttgttttct 39 ||||||||||||||||||||| Sbjct: 154381 agttattttttgttgttttct 154361
>gb|AC151292.2| Mus musculus BAC clone RP23-138P14 from chromosome 17, complete sequence Length = 216585 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 agttattttttgttgttttct 39 ||||||||||||||||||||| Sbjct: 79529 agttattttttgttgttttct 79549
>ref|XM_470116.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1005 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 406 ccacgcgctcgccgccgccgacggc 430 |||||||||||||||||||| |||| Sbjct: 162 ccacgcgctcgccgccgccggcggc 186
>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017K09, complete sequence Length = 155525 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 409 cgcgctcgccgccgccgacgg 429 ||||||||||||||||||||| Sbjct: 76751 cgcgctcgccgccgccgacgg 76731
>gb|AC113600.19| Mus musculus chromosome 6, clone RP23-110A19, complete sequence Length = 212705 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 19 agttattttttgttgttttcttctt 43 |||||||||||||||||| |||||| Sbjct: 36993 agttattttttgttgtttccttctt 36969
>gb|AC116130.15| Mus musculus chromosome 17, clone RP23-98F21, complete sequence Length = 228842 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 tttttgttgttttcttcttgg 45 ||||||||||||||||||||| Sbjct: 198151 tttttgttgttttcttcttgg 198171
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 406 ccacgcgctcgccgccgccgacggc 430 |||||||||||||||||||| |||| Sbjct: 34036702 ccacgcgctcgccgccgccggcggc 34036726
>gb|AY935269.1| Antirrhinum majus plena (PLE) gene, complete sequence Length = 85060 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 agtagtagtagtagtcttctt 223 ||||||||||||||||||||| Sbjct: 39262 agtagtagtagtagtcttctt 39282
>emb|AL359815.26| Human DNA sequence from clone RP11-63N8 on chromosome 1 Contains the 3' end of the ALPL gene for alkaline phosphatase, liver/bone/kidney, the RAP1GA1 gene for RAP1, GTPase activating protein 1, a novel gene, the 3' end of the USP31 gene for ubiquitin specific protease 31 and a CpG island, complete sequence Length = 149651 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 gggagcggcgccggggaagga 248 ||||||||||||||||||||| Sbjct: 94196 gggagcggcgccggggaagga 94176
>emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genome; segment 4/16 Length = 348942 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 406 ccacgcgctcgccgccgccga 426 ||||||||||||||||||||| Sbjct: 247632 ccacgcgctcgccgccgccga 247612
>emb|AL626770.9| Mouse DNA sequence from clone RP23-379J18 on chromosome 11 Contains a novel gene and a serine/arginine repetitive matrix 1 (Srrm1) pseudogene, complete sequence Length = 188854 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 tttttgttgttttcttcttgg 45 ||||||||||||||||||||| Sbjct: 41382 tttttgttgttttcttcttgg 41402
>emb|BX548160.13| Zebrafish DNA sequence from clone DKEY-25G11 in linkage group 11, complete sequence Length = 237930 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 197 ctcactagtagtagtagtagt 217 ||||||||||||||||||||| Sbjct: 151499 ctcactagtagtagtagtagt 151519
>ref|XM_944129.1| PREDICTED: Homo sapiens hypothetical protein LOC650278 (LOC650278), mRNA Length = 1866 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 gggagcggcgccggggaagga 248 ||||||||||||||||||||| Sbjct: 1587 gggagcggcgccggggaagga 1567
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 409 cgcgctcgccgccgccgacgg 429 ||||||||||||||||||||| Sbjct: 24562569 cgcgctcgccgccgccgacgg 24562549
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 406 ccacgcgctcgccgccgccgacggc 430 |||||||||||||||||||| |||| Sbjct: 34127174 ccacgcgctcgccgccgccggcggc 34127198
>gb|AF532114.1| Mus musculus strain 129/SvJ BAC clone citb544e14 from the MHC region, complete sequence Length = 153869 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 tttttgttgttttcttcttgg 45 ||||||||||||||||||||| Sbjct: 29740 tttttgttgttttcttcttgg 29720
>gb|AF532112.1| Mus musculus strain 129/SvJ BAC clone citb20h22 from the MHC region, complete sequence Length = 172199 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 tttttgttgttttcttcttgg 45 ||||||||||||||||||||| Sbjct: 124156 tttttgttgttttcttcttgg 124136
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 406 ccacgcgctcgccgccgccgacggc 430 |||||||||||||||||||| |||| Sbjct: 514 ccacgcgctcgccgccgccggcggc 538
>gb|AF230340.1|AF230340 Mus musculus nuclear RNA polymerase I small specific subunit Rpa12 gene, complete cds Length = 4591 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 tttttgttgttttcttcttgg 45 ||||||||||||||||||||| Sbjct: 2253 tttttgttgttttcttcttgg 2273
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 406 ccacgcgctcgccgccgccgacggc 430 |||||||||||||||||||| |||| Sbjct: 20989 ccacgcgctcgccgccgccggcggc 20965
>emb|AJ316085.1|SVI316085 Scallion virus X, complete genome Length = 6985 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 agaagacgaagccggcgaact 297 ||||||||||||||||||||| Sbjct: 6657 agaagacgaagccggcgaact 6637
>emb|AJ334742.1|HSA334742 Homo sapiens genomic sequence surrounding NotI site, clone NR3-155R Length = 769 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 gggagcggcgccggggaagga 248 ||||||||||||||||||||| Sbjct: 110 gggagcggcgccggggaagga 90
>emb|AJ326348.1|HSA326348 Homo sapiens genomic sequence surrounding NotI site, clone NL1-GE6C Length = 631 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 gggagcggcgccggggaagga 248 ||||||||||||||||||||| Sbjct: 110 gggagcggcgccggggaagga 90
>dbj|AK058641.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-E01, full insert sequence Length = 1248 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 406 ccacgcgctcgccgccgccgacggc 430 |||||||||||||||||||| |||| Sbjct: 219 ccacgcgctcgccgccgccggcggc 243
>gb|AC005960.1|AC005960 Mus musculus chromosome 17 BAC citb20h22 from the MHC region, complete sequence Length = 158414 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 tttttgttgttttcttcttgg 45 ||||||||||||||||||||| Sbjct: 124138 tttttgttgttttcttcttgg 124118
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 408 acgcgctcgccgccgccgacg 428 ||||||||||||||||||||| Sbjct: 124178 acgcgctcgccgccgccgacg 124198
>emb|Z81549.2|CEF55C9 Caenorhabditis elegans Cosmid F55C9, complete sequence Length = 29404 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 tattttttgttgttttcttct 42 ||||||||||||||||||||| Sbjct: 10274 tattttttgttgttttcttct 10294
>gb|AC145116.3| Mus musculus BAC clone RP23-434H14 from 6, complete sequence Length = 204134 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 19 agttattttttgttgttttcttctt 43 |||||||||||||||||| |||||| Sbjct: 203407 agttattttttgttgtttccttctt 203383
>emb|CR956641.9| Mouse DNA sequence from clone RP23-77N9 on chromosome 17, complete sequence Length = 202624 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 tttttgttgttttcttcttgg 45 ||||||||||||||||||||| Sbjct: 61646 tttttgttgttttcttcttgg 61666
>gb|AC170594.2| Mus musculus BAC clone RP24-425N5 from chromosome 17, complete sequence Length = 161769 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 agttattttttgttgttttct 39 ||||||||||||||||||||| Sbjct: 10508 agttattttttgttgttttct 10528
>emb|AL772292.10| Mouse DNA sequence from clone RP23-109C16 on chromosome 2, complete sequence Length = 201671 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 ctagttattttttgttgtttt 37 ||||||||||||||||||||| Sbjct: 108568 ctagttattttttgttgtttt 108588
>emb|AL807380.6| Mouse DNA sequence from clone RP23-192G18 on chromosome 2, complete sequence Length = 208614 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 agtagtagtagtagtcttctt 223 ||||||||||||||||||||| Sbjct: 191598 agtagtagtagtagtcttctt 191618
>gb|AY846301.1| Armillariella tabescens clone EST2000177 unknown mRNA Length = 3416 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cctctagttattttttgttg 33 |||||||||||||||||||| Sbjct: 1398 cctctagttattttttgttg 1417
>ref|XM_507001.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1353_F08.16-1 mRNA Length = 1411 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 cgcgctcgccgccgccgacg 428 |||||||||||||||||||| Sbjct: 870 cgcgctcgccgccgccgacg 889
>ref|XM_468017.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1316 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 cgcgctcgccgccgccgacg 428 |||||||||||||||||||| Sbjct: 879 cgcgctcgccgccgccgacg 898
>ref|NM_196355.1| Oryza sativa (japonica cultivar-group) putative disease resistance response protein (OSJNBb0058B20.9), mRNA Length = 567 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 cgctcgccgccgccgacggc 430 |||||||||||||||||||| Sbjct: 305 cgctcgccgccgccgacggc 324
>ref|XM_478609.1| Oryza sativa (japonica cultivar-group), mRNA Length = 597 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 gggagcggcgccggggaagg 247 |||||||||||||||||||| Sbjct: 437 gggagcggcgccggggaagg 418
>gb|AY611148.1| Melanohalea olivacea voucher Vitikainen 16196 small subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 911 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ttttttgttgttttcttctt 43 |||||||||||||||||||| Sbjct: 616 ttttttgttgttttcttctt 635
>gb|AF411339.1| Homo sapiens brain-derived neurotrophic factor opposite strand (BDNFOS) gene, partial sequence; and brain-derived neurotrophic factor (BDNF) gene, complete cds Length = 115886 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gttattttttgttgttttct 39 |||||||||||||||||||| Sbjct: 97003 gttattttttgttgttttct 96984
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 gggagcggcgccggggaagg 247 |||||||||||||||||||| Sbjct: 2488324 gggagcggcgccggggaagg 2488305
>gb|AC172160.3| Pan troglodytes chromosome X clone PTB-96F20 map human otholog p11.4, complete sequence Length = 203345 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ttttttgttgttttcttctt 43 |||||||||||||||||||| Sbjct: 156782 ttttttgttgttttcttctt 156801
>gb|AY392893.1| Homo sapiens clone RA702-A2-21.fa immunoglobulin heavy chain mRNA, partial cds Length = 384 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 tagtagtagtagtagtcttc 221 |||||||||||||||||||| Sbjct: 302 tagtagtagtagtagtcttc 283
>ref|NM_001039590.1| Homo sapiens ubiquitin specific peptidase 9, X-linked (USP9X), transcript variant 3, mRNA Length = 12401 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ttttttgttgttttcttctt 43 |||||||||||||||||||| Sbjct: 10381 ttttttgttgttttcttctt 10400
>ref|NM_001039591.1| Homo sapiens ubiquitin specific peptidase 9, X-linked (USP9X), transcript variant 4, mRNA Length = 12353 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ttttttgttgttttcttctt 43 |||||||||||||||||||| Sbjct: 10333 ttttttgttgttttcttctt 10352
>ref|NM_170735.4| Homo sapiens brain-derived neurotrophic factor (BDNF), transcript variant 1, mRNA Length = 4247 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gttattttttgttgttttct 39 |||||||||||||||||||| Sbjct: 2340 gttattttttgttgttttct 2321
>ref|NM_170732.3| Homo sapiens brain-derived neurotrophic factor (BDNF), transcript variant 2, mRNA Length = 4084 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gttattttttgttgttttct 39 |||||||||||||||||||| Sbjct: 2177 gttattttttgttgttttct 2158
>ref|NM_170731.3| Homo sapiens brain-derived neurotrophic factor (BDNF), transcript variant 3, mRNA Length = 4044 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gttattttttgttgttttct 39 |||||||||||||||||||| Sbjct: 2137 gttattttttgttgttttct 2118
>ref|NM_170734.2| Homo sapiens brain-derived neurotrophic factor (BDNF), transcript variant 6, mRNA Length = 3958 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gttattttttgttgttttct 39 |||||||||||||||||||| Sbjct: 2051 gttattttttgttgttttct 2032
>ref|NM_170733.2| Homo sapiens brain-derived neurotrophic factor (BDNF), transcript variant 5, mRNA Length = 4016 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gttattttttgttgttttct 39 |||||||||||||||||||| Sbjct: 2109 gttattttttgttgttttct 2090
>ref|NM_001709.3| Homo sapiens brain-derived neurotrophic factor (BDNF), transcript variant 4, mRNA Length = 3972 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gttattttttgttgttttct 39 |||||||||||||||||||| Sbjct: 2065 gttattttttgttgttttct 2046
>gb|AC147047.2| Mus musculus BAC clone RP23-97D19 from chromosome 6, complete sequence Length = 239653 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 tcactagtagtagtagtagt 217 |||||||||||||||||||| Sbjct: 137307 tcactagtagtagtagtagt 137288
>emb|CT009551.8| Pig DNA sequence from clone CH242-214G8 on chromosome 17, complete sequence Length = 239237 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tagttattttttgttgtttt 37 |||||||||||||||||||| Sbjct: 47025 tagttattttttgttgtttt 47006
>emb|CT010521.4| M.truncatula DNA sequence from clone MTH2-34D24 on chromosome 3, complete sequence Length = 104085 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ttttgttgttttcttcttgg 45 |||||||||||||||||||| Sbjct: 40136 ttttgttgttttcttcttgg 40155
>gb|AC123810.4| Mus musculus BAC clone RP24-178B17 from chromosome 8, complete sequence Length = 161521 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 tagtagtagtagtagtcttc 221 |||||||||||||||||||| Sbjct: 103921 tagtagtagtagtagtcttc 103902
>emb|Z81503.1|CEF14F7 Caenorhabditis elegans Cosmid F14F7, complete sequence Length = 25468 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 tagtagtagtagtagtcttc 221 |||||||||||||||||||| Sbjct: 6460 tagtagtagtagtagtcttc 6441
>gb|AY368473.1| Sus scrofa isolate LWH006 natural resistance associated macrophage protein 1 (NRAMP1) gene, intron 6 and partial cds Length = 455 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ttttttgttgttttcttctt 43 |||||||||||||||||||| Sbjct: 352 ttttttgttgttttcttctt 371
>gb|AF462604.1| Mus musculus HMG-L6 (Hmgl6), T2R6 (T2r6), and candidate taste receptor T2R4 (T2r4) genes, complete cds Length = 84503 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ttattttttgttgttttctt 40 |||||||||||||||||||| Sbjct: 67388 ttattttttgttgttttctt 67369
>gb|AC144644.3| Medicago truncatula clone mth2-14l3, complete sequence Length = 117645 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tagttattttttgttgtttt 37 |||||||||||||||||||| Sbjct: 67630 tagttattttttgttgtttt 67649 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tagttattttttgttgtttt 37 |||||||||||||||||||| Sbjct: 67246 tagttattttttgttgtttt 67265
>gb|AC165244.2| Mus musculus BAC clone RP24-498C9 from chromosome 14, complete sequence Length = 191747 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 tagtagtagtagtagtcttc 221 |||||||||||||||||||| Sbjct: 123384 tagtagtagtagtagtcttc 123403
>emb|AL691455.20| Human DNA sequence from clone CTD-2411I11 on chromosome 10 Contains two CpG islands, complete sequence Length = 41452 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 tcctctagttattttttgttgttt 36 ||||||||||||||||| |||||| Sbjct: 19369 tcctctagttatttttttttgttt 19346
>emb|AL158047.9| Human DNA sequence from clone RP11-388B24 on chromosome 9 Contains a novel pseudogene, a novel gene, a DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 10 (RNA helicase) (HRH-J8) (DDX10) pseudogene and a ribosomal protein S2 (LLREP3) (RPS2) pseudogene, complete sequence Length = 201629 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 tttttgttgttttcttcttg 44 |||||||||||||||||||| Sbjct: 6997 tttttgttgttttcttcttg 7016
>gb|AC087446.13| Homo sapiens chromosome 11, clone RP11-651M4, complete sequence Length = 167865 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gttattttttgttgttttct 39 |||||||||||||||||||| Sbjct: 148979 gttattttttgttgttttct 148960
>emb|AL117348.26|HSDJ559A3 Human DNA sequence from clone RP4-559A3 on chromosome 1q41-42.2 Contains the 5' end of a novel gene (KIAA0792), the LEFTB gene for left-right determination, factor B, the PYCR2 gene for pyrroline-5-carboxylate reductase family, member 2, the EBAF gene for endometrial bleeding associated factor (left-right determination, factor A; transforming growth factor beta superfamily), a novel gene, an NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa (NDUFA3) pseudogene and two CpG islands, complete sequence Length = 127736 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ttattttttgttgttttctt 40 |||||||||||||||||||| Sbjct: 80450 ttattttttgttgttttctt 80431
>emb|AL109797.18|HS1172N10 Human DNA sequence from clone RP5-1172N10 on chromosome Xp11.3-11.4 Contains the 3' end of the USP9X gene for X chromosome ubiquitin specific protease 9 (fat facets-like Drosophila), a novel gene and a CpG island, complete sequence Length = 129293 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ttttttgttgttttcttctt 43 |||||||||||||||||||| Sbjct: 60229 ttttttgttgttttcttctt 60248
>emb|AL731792.12| Mouse DNA sequence from clone RP23-189P1 on chromosome 11 Contains the 5' end of a novel gene, the 3' end of the Spnb2 gene for spectrin beta 2 and a CpG island, complete sequence Length = 143722 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 attttttgttgttttcttct 42 |||||||||||||||||||| Sbjct: 12564 attttttgttgttttcttct 12545
>gb|AC079851.14| Homo sapiens 12 BAC RP11-349L8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 82421 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ttattttttgttgttttctt 40 |||||||||||||||||||| Sbjct: 43890 ttattttttgttgttttctt 43871
>emb|BX324130.5| Zebrafish DNA sequence from clone DKEY-30J16 in linkage group 11, complete sequence Length = 209188 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ttattttttgttgttttctt 40 |||||||||||||||||||| Sbjct: 71142 ttattttttgttgttttctt 71123
>emb|CR859589.1| Pongo pygmaeus mRNA; cDNA DKFZp459O184 (from clone DKFZp459O184) Length = 3241 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ttattttttgttgttttctt 40 |||||||||||||||||||| Sbjct: 1823 ttattttttgttgttttctt 1804
>gb|DQ421402.1| Ictalurus punctatus clone BM1-31 microsatellite sequences Length = 386 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 tagtagtagtagtagtcttc 221 |||||||||||||||||||| Sbjct: 185 tagtagtagtagtagtcttc 204
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 gtcgaacacccacagcgcgt 357 |||||||||||||||||||| Sbjct: 4128156 gtcgaacacccacagcgcgt 4128175
>gb|AF453501.1| Actinosynnema pretiosum subsp. auranticum maytansinoid antitumor agent ansamitocin biosynthetic gene cluster I, partial sequence Length = 82746 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 accacgcgctcgccgccgccgacg 428 |||||||||||||||||| ||||| Sbjct: 73800 accacgcgctcgccgccgacgacg 73777
>emb|BX470113.8| Zebrafish DNA sequence from clone DKEY-246M15 in linkage group 17, complete sequence Length = 118640 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gttattttttgttgttttct 39 |||||||||||||||||||| Sbjct: 63786 gttattttttgttgttttct 63767
>dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103 Length = 1282697 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 actagtagtagtagtagtct 219 |||||||||||||||||||| Sbjct: 214863 actagtagtagtagtagtct 214844
>gb|AC108884.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBb0058B20 from chromosome 10, complete sequence Length = 156232 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 cgctcgccgccgccgacggc 430 |||||||||||||||||||| Sbjct: 33068 cgctcgccgccgccgacggc 33087
>gb|AC023738.3| Drosophila melanogaster X BAC RP98-6F4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 103196 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ttttttgttgttttcttctt 43 |||||||||||||||||||| Sbjct: 20444 ttttttgttgttttcttctt 20463
>gb|AC099569.2| Homo sapiens chromosome 1 clone RP5-1007M22, complete sequence Length = 126833 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 gttattttttgttgttttct 39 |||||||||||||||||||| Sbjct: 18149 gttattttttgttgttttct 18168
>gb|AY054400.2| Homo sapiens brain-derived neurotrophic factor BDNF6B (BDNF) mRNA, complete cds, alternatively spliced Length = 3957 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gttattttttgttgttttct 39 |||||||||||||||||||| Sbjct: 2050 gttattttttgttgttttct 2031
>gb|AY054399.2| Homo sapiens brain-derived neurotrophic factor BDNF6A (BDNF) mRNA, complete cds, alternatively spliced Length = 3856 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gttattttttgttgttttct 39 |||||||||||||||||||| Sbjct: 1949 gttattttttgttgttttct 1930
>gb|AY054398.2| Homo sapiens brain-derived neurotrophic factor BDNF5 (BDNF) mRNA, complete cds, alternatively spliced Length = 3971 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gttattttttgttgttttct 39 |||||||||||||||||||| Sbjct: 2064 gttattttttgttgttttct 2045
>gb|AY054397.2| Homo sapiens brain-derived neurotrophic factor BDNF4 (BDNF) mRNA, complete cds, alternatively spliced Length = 3924 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gttattttttgttgttttct 39 |||||||||||||||||||| Sbjct: 2017 gttattttttgttgttttct 1998
>gb|AY054396.2| Homo sapiens brain-derived neurotrophic factor BDNF3 (BDNF) mRNA, complete cds, alternatively spliced Length = 3841 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gttattttttgttgttttct 39 |||||||||||||||||||| Sbjct: 1934 gttattttttgttgttttct 1915
>gb|AY054395.2| Homo sapiens brain-derived neurotrophic factor BDNF2C (BDNF) mRNA, complete cds, alternatively spliced Length = 4083 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gttattttttgttgttttct 39 |||||||||||||||||||| Sbjct: 2176 gttattttttgttgttttct 2157
>gb|AY054394.2| Homo sapiens brain-derived neurotrophic factor BDNF2B (BDNF) mRNA, complete cds, alternatively spliced Length = 4000 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gttattttttgttgttttct 39 |||||||||||||||||||| Sbjct: 2093 gttattttttgttgttttct 2074
>gb|AY054393.2| Homo sapiens brain-derived neurotrophic factor BDNF2A (BDNF) mRNA, complete cds, alternatively spliced Length = 3786 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gttattttttgttgttttct 39 |||||||||||||||||||| Sbjct: 1879 gttattttttgttgttttct 1860
>gb|AY054392.2| Homo sapiens brain-derived neurotrophic factor BDNF1 (BDNF) mRNA, complete cds, alternatively spliced Length = 4043 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gttattttttgttgttttct 39 |||||||||||||||||||| Sbjct: 2136 gttattttttgttgttttct 2117
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 cgctcgccgccgccgacggc 430 |||||||||||||||||||| Sbjct: 12887782 cgctcgccgccgccgacggc 12887763
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 gggagcggcgccggggaagg 247 |||||||||||||||||||| Sbjct: 21412388 gggagcggcgccggggaagg 21412369
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 cgcgctcgccgccgccgacg 428 |||||||||||||||||||| Sbjct: 32580603 cgcgctcgccgccgccgacg 32580622
>gb|AC114785.5| Homo sapiens BAC clone RP11-607G14 from 2, complete sequence Length = 118022 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 gttattttttgttgttttcttctt 43 |||||||||| ||||||||||||| Sbjct: 80393 gttattttttattgttttcttctt 80370
>gb|AC140204.3| Mus musculus BAC clone RP24-342N5 from chromosome 6, complete sequence Length = 200130 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 ttattttttgttgttttctt 40 |||||||||||||||||||| Sbjct: 99931 ttattttttgttgttttctt 99950
>gb|AC160568.2| Pan troglodytes BAC clone CH251-293A11 from chromosome unknown, complete sequence Length = 159393 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ttattttttgttgttttctt 40 |||||||||||||||||||| Sbjct: 74036 ttattttttgttgttttctt 74017
>gb|AC012665.8| Homo sapiens BAC clone RP11-19E11 from 2, complete sequence Length = 126039 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 gttattttttgttgttttcttctt 43 |||||||||| ||||||||||||| Sbjct: 69444 gttattttttattgttttcttctt 69421
>gb|AC104563.14| Homo sapiens chromosome 11, clone RP11-587D21, complete sequence Length = 141200 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 gttattttttgttgttttct 39 |||||||||||||||||||| Sbjct: 77416 gttattttttgttgttttct 77435
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 acgcgctcgccgccgccgac 427 |||||||||||||||||||| Sbjct: 1990092 acgcgctcgccgccgccgac 1990111
>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome Length = 1358633 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 ttattttttgttgttttctt 40 |||||||||||||||||||| Sbjct: 691782 ttattttttgttgttttctt 691801
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 cgcgctcgccgccgccgacg 428 |||||||||||||||||||| Sbjct: 2226130 cgcgctcgccgccgccgacg 2226149
>dbj|AP005156.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1729_E01 Length = 155527 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 gggagcggcgccggggaagg 247 |||||||||||||||||||| Sbjct: 56444 gggagcggcgccggggaagg 56425
>dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1611_C08 Length = 135386 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 cgcgctcgccgccgccgacg 428 |||||||||||||||||||| Sbjct: 7974 cgcgctcgccgccgccgacg 7993
>dbj|AP004058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1353_F08 Length = 101988 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 cgcgctcgccgccgccgacg 428 |||||||||||||||||||| Sbjct: 77576 cgcgctcgccgccgccgacg 77595
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ttattttttgttgttttctt 40 |||||||||||||||||||| Sbjct: 87588 ttattttttgttgttttctt 87569
>dbj|AK108922.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-H09, full insert sequence Length = 785 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 cgctcgccgccgccgacggc 430 |||||||||||||||||||| Sbjct: 408 cgctcgccgccgccgacggc 427
>dbj|AK103969.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-B02, full insert sequence Length = 1316 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 cgcgctcgccgccgccgacg 428 |||||||||||||||||||| Sbjct: 879 cgcgctcgccgccgccgacg 898
>dbj|AK071557.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099D13, full insert sequence Length = 1411 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 cgcgctcgccgccgccgacg 428 |||||||||||||||||||| Sbjct: 870 cgcgctcgccgccgccgacg 889
>dbj|AK066805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013078A14, full insert sequence Length = 3000 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 cgcgctcgccgccgccgacg 428 |||||||||||||||||||| Sbjct: 2563 cgcgctcgccgccgccgacg 2582
>gb|AC154790.2| Mus musculus BAC clone RP24-481A4 from 17, complete sequence Length = 194675 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 ttattttttgttgttttctt 40 |||||||||||||||||||| Sbjct: 191706 ttattttttgttgttttctt 191725
>emb|BX548024.4| Zebrafish DNA sequence from clone DKEY-218H11 in linkage group 2, complete sequence Length = 218565 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 tagtagtagtagtagtcttc 221 |||||||||||||||||||| Sbjct: 209454 tagtagtagtagtagtcttc 209473
>emb|BX088564.10| Zebrafish DNA sequence from clone CH211-239H19 in linkage group 4, complete sequence Length = 132891 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 tagtagtagtagtagtcttc 221 |||||||||||||||||||| Sbjct: 45015 tagtagtagtagtagtcttc 44996
>gb|AY111732.1| Zea mays CL12888_1 mRNA sequence Length = 655 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 261 cggacggatgccagggagaagacgaagccggcgaac 296 |||||||| || | |||||| ||||||||||||||| Sbjct: 92 cggacggacgcaacggagaacacgaagccggcgaac 127
>gb|AY108292.1| Zea mays PCO081562 mRNA sequence Length = 976 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 actagtagtagtagtagtct 219 |||||||||||||||||||| Sbjct: 701 actagtagtagtagtagtct 682
>gb|AE003447.5| Drosophila melanogaster chromosome X, section 31 of 74 of the complete sequence Length = 288721 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 ttttttgttgttttcttctt 43 |||||||||||||||||||| Sbjct: 104288 ttttttgttgttttcttctt 104269
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 gtcgaacacccacagcgcgt 357 |||||||||||||||||||| Sbjct: 4132979 gtcgaacacccacagcgcgt 4132998
>emb|AL845473.7| Mouse DNA sequence from clone RP23-212E8 on chromosome 2, complete sequence Length = 189998 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 ttattttttgttgttttctt 40 |||||||||||||||||||| Sbjct: 134393 ttattttttgttgttttctt 134412
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 cgcgctcgccgccgccgacg 428 |||||||||||||||||||| Sbjct: 2668289 cgcgctcgccgccgccgacg 2668308
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 cgctcgccgccgccgacggc 430 |||||||||||||||||||| Sbjct: 12895122 cgctcgccgccgccgacggc 12895103
>emb|BX004791.6| Mouse DNA sequence from clone RP24-233L10 on chromosome 4, complete sequence Length = 123244 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 19 agttattttttgttgttttcttct 42 |||| ||||||||||||||||||| Sbjct: 74196 agtttttttttgttgttttcttct 74219
>gb|AC149051.4| Mus musculus BAC clone RP24-325F10 from 8, complete sequence Length = 184939 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 tagtagtagtagtagtcttc 221 |||||||||||||||||||| Sbjct: 67295 tagtagtagtagtagtcttc 67276
>gb|AC151476.1| Mus musculus BAC clone RP23-287H13 from 8, complete sequence Length = 155220 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 tagtagtagtagtagtcttc 221 |||||||||||||||||||| Sbjct: 140255 tagtagtagtagtagtcttc 140236
>emb|CT033752.6| Mouse DNA sequence from clone RP23-140I20 on chromosome 17, complete sequence Length = 216455 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 ttattttttgttgttttctt 40 |||||||||||||||||||| Sbjct: 162325 ttattttttgttgttttctt 162344
>emb|AL136038.5|CNS01DVT Human chromosome 14 DNA sequence BAC C-2302E22 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 151930 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 17 ctagttattttttgttgttttcttcttg 44 |||||| |||||||||||||| |||||| Sbjct: 135250 ctagtttttttttgttgtttttttcttg 135223
>emb|AL606918.9| Mouse DNA sequence from clone RP23-327O13 on chromosome 4, complete sequence Length = 192787 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tagttattttttgttgtttt 37 |||||||||||||||||||| Sbjct: 124634 tagttattttttgttgtttt 124615
>gb|M13420.1|HUM18BPD Human bcl-2 gene (chromosome 18) translocation to Ig H-chain locus J6 gene (chromosome 14) breakpoint, from follicular lymphoma 1144 Length = 165 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 tagtagtagtagtagtcttc 221 |||||||||||||||||||| Sbjct: 119 tagtagtagtagtagtcttc 100
>dbj|D63338.1| Aspergillus oryzae DNA for tannase, complete cds Length = 3561 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 actagtagtagtagtagtct 219 |||||||||||||||||||| Sbjct: 1018 actagtagtagtagtagtct 999 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,944,229 Number of Sequences: 3902068 Number of extensions: 3944229 Number of successful extensions: 185358 Number of sequences better than 10.0: 133 Number of HSP's better than 10.0 without gapping: 133 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 182662 Number of HSP's gapped (non-prelim): 2695 length of query: 430 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 408 effective length of database: 17,147,199,772 effective search space: 6996057506976 effective search space used: 6996057506976 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
