Clone Name | rbart28c06 |
---|---|
Clone Library Name | barley_pub |
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 43.5 bits (101), Expect = 2e-04 Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 14/86 (16%) Frame = -2 Query: 447 YSVVKELIDHPQRNGFTTSDTSCCGVDTK--------------VGGLCLPDSTPCRDRKA 310 YS+ EL H Q +GF S SCCG K V G + PC + Sbjct: 281 YSLKHELFVHAQGHGFKGSLVSCCGHGGKYNYNKGIGCGMKKIVKGKEVYIGKPCDEPDK 340 Query: 309 YVFWDAYHTSDAANRVIADRLWAGMT 232 V WD H + AAN+ I D++ G++ Sbjct: 341 AVVWDGVHFTQAANKFIFDKIAPGLS 366
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 39.7 bits (91), Expect = 0.003 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Frame = -2 Query: 447 YSVVKELIDHPQRNGFTTSDTSCCGVDT-KVGGLCLPDSTP-CRDRKAYVFWDAYHTSDA 274 Y+++ ++++ P GF + CC G LC ++ C + +Y+FWD H + Sbjct: 456 YTIISQMLETPAAYGFEETKKPCCKTGLLSAGALCKKSTSKICPNTSSYLFWDGVHPTQR 515 Query: 273 ANRVI 259 A + I Sbjct: 516 AYKTI 520
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 38.1 bits (87), Expect = 0.010 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Frame = -2 Query: 447 YSVVKELIDHPQRNGFTTSDTSCCGVDTKVGGLCLPDST--PCRDRKAYVFWDAYHTSDA 274 YS+ ++++ P+ GF CC + GG+ + T + +Y+FWD H S Sbjct: 373 YSIFSKMLESPEDYGFEEIKKPCCKIGLTKGGVFCKERTLKNMSNASSYLFWDGLHPSQR 432 Query: 273 ANRV 262 A + Sbjct: 433 AYEI 436
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 33.5 bits (75), Expect = 0.25 Identities = 23/87 (26%), Positives = 32/87 (36%), Gaps = 17/87 (19%) Frame = -2 Query: 447 YSVVKELIDHPQRNGFTTSDTSCCGVDTKVGGLCLPDSTPCRDR---------------- 316 YSV L P+++GF +CCG K + PC D Sbjct: 283 YSVKYSLFSEPEKHGFEFPLITCCGYGGKYN---FSVTAPCGDTVTADDGTKIVVGSCAC 339 Query: 315 -KAYVFWDAYHTSDAANRVIADRLWAG 238 V WD H ++AAN D++ G Sbjct: 340 PSVRVNWDGAHYTEAANEYFFDQISTG 366
>LRTM2_HUMAN (O43300) Leucine-rich repeat transmembrane neuronal protein 2| precursor (Leucine-rich repeat neuronal 2 protein) Length = 516 Score = 31.2 bits (69), Expect = 1.2 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 4/68 (5%) Frame = +2 Query: 251 RSAMTRLAASEVWYASQNTYALRSRQGVESGRQRPPTLVSTPQH----DVSDVVNPFLCG 418 RS T + +W S AL S G GR L +P H D+ D V+ F Sbjct: 301 RSLTTVGLSGNLWECSARICALASWLGSFQGRWEHSILCHSPDHTQGEDILDAVHGFQLC 360 Query: 419 WSMSSLTT 442 W++S+ T Sbjct: 361 WNLSTTVT 368
>LRTM2_MOUSE (Q8BGA3) Leucine-rich repeat transmembrane neuronal protein 2| precursor Length = 515 Score = 30.4 bits (67), Expect = 2.1 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 4/68 (5%) Frame = +2 Query: 251 RSAMTRLAASEVWYASQNTYALRSRQGVESGRQRPPTLVSTPQH----DVSDVVNPFLCG 418 +S T + +W S AL S G GR L +P H D+ D V+ F Sbjct: 301 KSLTTVGLSGNLWECSPRVCALASWLGSFQGRWEHSILCHSPDHTQGEDILDAVHGFQLC 360 Query: 419 WSMSSLTT 442 W++S+ T Sbjct: 361 WNLSTTVT 368
>CARA_METTH (O27079) Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase glutamine chain) Length = 356 Score = 30.4 bits (67), Expect = 2.1 Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 8/65 (12%) Frame = -2 Query: 414 QRNGFTTSDTSCCGVDTKVGGLCLPDSTP--CRDRKAYVFWDAYHTS------DAANRVI 259 Q +GFT S G D ++ L L D TP R+ VF YH D N I Sbjct: 292 QNHGFTVDPDSVKGTDIEITQLNLNDGTPEGIEHRELPVFSVQYHPEAGPGPHDTVN--I 349 Query: 258 ADRLW 244 DRLW Sbjct: 350 FDRLW 354
>HLT_VIBPA (Q99289) Thermolabile hemolysin precursor (TL) (Lecithin-dependent| haemolysin) (LDH) (Atypical phospholipase) (Phospholipase A2) (Lysophospholipase) Length = 418 Score = 30.0 bits (66), Expect = 2.7 Identities = 14/72 (19%), Positives = 31/72 (43%), Gaps = 5/72 (6%) Frame = -2 Query: 447 YSVVKELIDHPQRNGFTTSDTSCCGVDTKVG-----GLCLPDSTPCRDRKAYVFWDAYHT 283 +++ + L P+ +GF + C ++ L + +VFWD H Sbjct: 335 HALFETLTSAPEEHGFVNASDPCLDINRSSSVDYMYTHALRSECAASGAEKFVFWDVTHP 394 Query: 282 SDAANRVIADRL 247 + A +R +A+++ Sbjct: 395 TTATHRYVAEKM 406
>ADA20_HUMAN (O43506) ADAM 20 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase domain 20) Length = 726 Score = 28.9 bits (63), Expect = 6.0 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = -2 Query: 441 VVKELIDHPQRNGFTTSDTSCCGVDTKVGGLCLPDSTPCRD 319 V+ LI+H F +DT+C G D + G+ +PD +D Sbjct: 571 VIPNLIEHSTVQQFHLNDTTCWGTDYHL-GMAIPDIGEVKD 610
>HUTU_MOUSE (Q8VC12) Probable urocanate hydratase (EC 4.2.1.49) (Urocanase)| (Imidazolonepropionate hydrolase) Length = 676 Score = 28.5 bits (62), Expect = 7.9 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = +2 Query: 311 ALRSRQGVESGRQRPPTLVSTPQHDVSDVVNPF 409 A+ Q + SG+ + P ++S HDVS +PF Sbjct: 523 AVAINQAIASGKIKAPVVLSRDHHDVSGTDSPF 555 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,268,734 Number of Sequences: 219361 Number of extensions: 778094 Number of successful extensions: 2153 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2105 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2150 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)