ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart28c06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467638.1| Oryza sativa (japonica cultivar-group), mRNA 228 1e-56
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
3dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
4dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 172 6e-40
5dbj|AP005619.3| Oryza sativa (japonica cultivar-group) genomic D... 172 6e-40
6dbj|AP005527.3| Oryza sativa (japonica cultivar-group) genomic D... 172 6e-40
7dbj|AK108686.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 6e-40
8dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
9dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
10gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome... 121 2e-24
11dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
12gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 121 2e-24
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 107 3e-20
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
15gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome... 107 3e-20
16ref|NM_188691.1| Oryza sativa (japonica cultivar-group), predic... 105 1e-19
17dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
18dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
19dbj|AK062747.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 1e-19
20ref|XM_483067.1| Oryza sativa (japonica cultivar-group), mRNA 62 2e-06
21ref|NM_102707.2| Arabidopsis thaliana carboxylic ester hydrolase... 50 0.006
22ref|NM_102708.2| Arabidopsis thaliana unknown protein AT1G29680 ... 50 0.006
23gb|AY065046.1| Arabidopsis thaliana At1g29670/F15D2_22 mRNA, com... 50 0.006
24emb|BX815677.1|CNS0AE1G Arabidopsis thaliana Full-length cDNA Co... 50 0.006
25emb|BX816814.1|CNS0ABMA Arabidopsis thaliana Full-length cDNA Co... 50 0.006
26gb|AC068667.6|AC068667 Arabidopsis thaliana chromosome 1 BAC F15... 50 0.006
27gb|AY086296.1| Arabidopsis thaliana clone 23556 mRNA, complete s... 50 0.006
28gb|AC091732.4| Oryza sativa (japonica cultivar-group) chromosome... 46 0.098
29gb|AC124213.1| Genomic sequence for Oryza sativa, Nipponbare str... 46 0.098
30dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.098
31dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.098
32gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.098
33ref|XM_469846.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.39
34gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genom... 44 0.39
35gb|CP000249.1| Frankia sp. CcI3, complete genome 44 0.39
36dbj|AB099524.1| Oryza sativa (japonica cultivar-group) ORC5 mRNA... 44 0.39
37dbj|AK063449.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.39
38gb|DQ159935.1| Macaca fascicularis GluR7 (GRIK3) mRNA, complete cds 42 1.5
39ref|NM_196893.1| Oryza sativa (japonica cultivar-group) putative... 42 1.5
40ref|NM_000831.2| Homo sapiens glutamate receptor, ionotropic, ka... 42 1.5
41emb|AJ249210.1|HSA249210 Homo sapiens mRNA for glutamate/kainate... 42 1.5
42gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, co... 42 1.5
43gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 gen... 42 1.5
44emb|AJ299451.1|HSA299451 Homo sapiens mRNA for glutamate recepto... 42 1.5
45gb|AC117945.2| Homo sapiens chromosome 1 clone RP4-614N24, compl... 42 1.5
46dbj|AK108201.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
47dbj|AK060625.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
48gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 42 1.5
49gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.5
50gb|U16127.1|HSU16127 Human glutamate/kainate receptor subunit (E... 42 1.5
51ref|NM_114900.2| Arabidopsis thaliana carboxylic ester hydrolase... 40 6.0
52gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 6.0
53ref|XM_323959.1| Neurospora crassa OR74A predicted protein (NCU0... 40 6.0
54ref|XM_953754.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.0
55gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 6.0
56gb|AY386265.1| Bovine papular stomatitis virus strain BV-AR02, c... 40 6.0
57ref|XM_546782.2| PREDICTED: Canis familiaris similar to Protein ... 40 6.0
58gb|AF508154.1| Pseudomonas aeruginosa UDP-GlcNAc C6 dehydratase ... 40 6.0
59ref|XM_777437.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.0
60ref|XM_781297.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.0
61emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.0
62emb|BX640432.1| Bordetella parapertussis strain 12822, complete ... 40 6.0
63emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.0
64emb|BX294139.1| Pirellula sp. strain 1 complete genome; segment ... 40 6.0
65emb|BX294012.1|NC80A10 Neurospora crassa DNA linkage group V Cos... 40 6.0
66emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete ... 40 6.0
67emb|AL132976.2|ATF11C1 Arabidopsis thaliana DNA chromosome 3, BA... 40 6.0
68gb|AF498420.1| Pseudomonas aeruginosa serotype 09 putative O-ant... 40 6.0
69gb|AF498417.1| Pseudomonas aeruginosa serotype 06 putative O-ant... 40 6.0
70gb|AF498416.1| Pseudomonas aeruginosa serotype 05 putative O-ant... 40 6.0
71gb|AF498415.1| Pseudomonas aeruginosa serotype 04 putative O-ant... 40 6.0
72gb|AF498414.1| Pseudomonas aeruginosa serotype 03 putative O-ant... 40 6.0
73gb|AF498413.1| Pseudomonas aeruginosa serotype 020 putative O-an... 40 6.0
74gb|AF498412.1| Pseudomonas aeruginosa serotype 02 putative O-ant... 40 6.0
75gb|AF498411.1| Pseudomonas aeruginosa serotype 019 putative O-an... 40 6.0
76gb|AF498408.1| Pseudomonas aeruginosa serotype 016 putative O-an... 40 6.0
77gb|AF498407.1| Pseudomonas aeruginosa serotype 015 putative O-an... 40 6.0
78gb|AF498405.1| Pseudomonas aeruginosa serotype 014 putative O-an... 40 6.0
79gb|AF498404.1| Pseudomonas aeruginosa serotype 013 putative O-an... 40 6.0
80gb|AF498403.1| Pseudomonas aeruginosa serotype 012 putative O-an... 40 6.0
81gb|AF498402.1| Pseudomonas aeruginosa serotype 011 putative O-an... 40 6.0
82gb|AF498401.1| Pseudomonas aeruginosa serotype 010 putative O-an... 40 6.0
83gb|AF498400.1| Pseudomonas aeruginosa serotype 01 putative O-ant... 40 6.0
84gb|U49934.1|BMU49934 Boophilus microplus GP80 precursor, mRNA, p... 40 6.0
85gb|AC026443.4| Homo sapiens chromosome 5 clone CTD-2296H22, comp... 40 6.0
86gb|AE004738.1| Pseudomonas aeruginosa PAO1, section 299 of 529 o... 40 6.0
87gb|AF540991.1| Pseudomonas aeruginosa isolate 2-164 O-antigen bi... 40 6.0
88gb|AF540990.1| Pseudomonas aeruginosa isolate 1-60 O-antigen bio... 40 6.0
89dbj|AK117654.1| Arabidopsis thaliana At3g50400 mRNA for unknown ... 40 6.0
90gb|AF035937.1|AF035937 Pseudomonas aeruginosa strain IATS O6 Rps... 40 6.0
91emb|AJ328447.1|HSA328447 Homo sapiens genomic sequence surroundi... 40 6.0
92gb|U50396.1|PAU50396 Pseudomonas aeruginosa Wzz (Rol) (wzz (rol)... 40 6.0
93gb|AF285636.1| Burkholderia mallei capsule gene cluster, complet... 40 6.0 
>ref|XM_467638.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1074

 Score =  228 bits (115), Expect = 1e-56
 Identities = 196/223 (87%)
 Strand = Plus / Minus

                                                                        
Query: 226  ggcggtcgtcatgccggcccagaggcggtcggcgatgacccggttggcggcgtcggaggt 285
            |||| ||| |||| || |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1005 ggcgctcggcatggcgtcccagaggaggtcggcgatgacccggttggcggcgtcggaggt 946

                                                                        
Query: 286  gtggtacgcgtcccagaacacgtacgccttgcggtcgcggcagggcgtcgagtccggcag 345
            |||||||||||||||||| ||| ||||||||||||||| |||||||  ||||| ||||||
Sbjct: 945  gtggtacgcgtcccagaagacgaacgccttgcggtcgctgcagggccgcgagttcggcag 886

                                                                        
Query: 346  gcagaggcccccgaccttggtgtccacgccgcagcacgacgtgtcggacgtcgtgaaccc 405
            ||| |||||||| ||| | |||||||||  ||||||||||||||  | ||||||||||||
Sbjct: 885  gcacaggccccccaccgtcgtgtccacgttgcagcacgacgtgtgcgccgtcgtgaaccc 826

                                                       
Query: 406  gtttctctgcgggtggtcgatgagctccttgacgacggagtag 448
            || | | |  |||||| ||||||||||| ||||||||||||||
Sbjct: 825  gtgtttttcggggtggacgatgagctccatgacgacggagtag 783
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  198 bits (100), Expect = 1e-47
 Identities = 160/180 (88%)
 Strand = Plus / Plus

                                                                            
Query: 226      ggcggtcgtcatgccggcccagaggcggtcggcgatgacccggttggcggcgtcggaggt 285
                |||| ||| |||| || |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 30573192 ggcgctcggcatggcgtcccagaggaggtcggcgatgacccggttggcggcgtcggaggt 30573251

                                                                            
Query: 286      gtggtacgcgtcccagaacacgtacgccttgcggtcgcggcagggcgtcgagtccggcag 345
                |||||||||||||||||| ||| ||||||||||||||| |||||||  ||||| ||||||
Sbjct: 30573252 gtggtacgcgtcccagaagacgaacgccttgcggtcgctgcagggccgcgagttcggcag 30573311

                                                                            
Query: 346      gcagaggcccccgaccttggtgtccacgccgcagcacgacgtgtcggacgtcgtgaaccc 405
                ||| |||||||| ||| | |||||||||  ||||||||||||||  | ||||||||||||
Sbjct: 30573312 gcacaggccccccaccgtcgtgtccacgttgcagcacgacgtgtgcgccgtcgtgaaccc 30573371



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 416      gggtggtcgatgagctccttgacgacggagtag 448
                |||||| ||||||||||| ||||||||||||||
Sbjct: 30573483 gggtggacgatgagctccatgacgacggagtag 30573515
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>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0643A10
          Length = 187931

 Score =  198 bits (100), Expect = 1e-47
 Identities = 160/180 (88%)
 Strand = Plus / Plus

                                                                         
Query: 226   ggcggtcgtcatgccggcccagaggcggtcggcgatgacccggttggcggcgtcggaggt 285
             |||| ||| |||| || |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 85200 ggcgctcggcatggcgtcccagaggaggtcggcgatgacccggttggcggcgtcggaggt 85259

                                                                         
Query: 286   gtggtacgcgtcccagaacacgtacgccttgcggtcgcggcagggcgtcgagtccggcag 345
             |||||||||||||||||| ||| ||||||||||||||| |||||||  ||||| ||||||
Sbjct: 85260 gtggtacgcgtcccagaagacgaacgccttgcggtcgctgcagggccgcgagttcggcag 85319

                                                                         
Query: 346   gcagaggcccccgaccttggtgtccacgccgcagcacgacgtgtcggacgtcgtgaaccc 405
             ||| |||||||| ||| | |||||||||  ||||||||||||||  | ||||||||||||
Sbjct: 85320 gcacaggccccccaccgtcgtgtccacgttgcagcacgacgtgtgcgccgtcgtgaaccc 85379



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 416   gggtggtcgatgagctccttgacgacggagtag 448
             |||||| ||||||||||| ||||||||||||||
Sbjct: 85491 gggtggacgatgagctccatgacgacggagtag 85523
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  172 bits (87), Expect = 6e-40
 Identities = 174/203 (85%)
 Strand = Plus / Minus

                                                                           
Query: 246     agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 305
               |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||
Sbjct: 8249178 agaggcggtcggcgatgacctggttggcagcgtcggaggtgtggtaggcgtcccagaaca 8249119

                                                                           
Query: 306     cgtacgccttgcggtcgcggcagggcgtcgagtccggcaggcagaggcccccgaccttgg 365
               || ||||| ||||||||  |||| ||  ||    ||||||||| || || || ||| | |
Sbjct: 8249118 cgaacgccgtgcggtcgtcgcagagctgcgccgtcggcaggcacagcccgcccaccgtcg 8249059

                                                                           
Query: 366     tgtccacgccgcagcacgacgtgtcggacgtcgtgaacccgtttctctgcgggtggtcga 425
               |||||||| |||||||||||||||  |||||| |||||||||   |||||||||| ||||
Sbjct: 8249058 tgtccacgtcgcagcacgacgtgtgcgacgtcttgaacccgtacttctgcgggtgctcga 8248999

                                      
Query: 426     tgagctccttgacgacggagtag 448
               |||||||| ||||||||||||||
Sbjct: 8248998 tgagctccatgacgacggagtag 8248976



 Score = 46.1 bits (23), Expect = 0.098
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                          
Query: 268     gttggcggcgtcggaggtgtggtacgcgtcccagaacacgtac 310
               |||||||  ||||| || ||||||| |||||||||||||||||
Sbjct: 6748423 gttggcgcggtcggtggggtggtactcgtcccagaacacgtac 6748381
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>dbj|AP005619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0624H09
          Length = 158719

 Score =  172 bits (87), Expect = 6e-40
 Identities = 174/203 (85%)
 Strand = Plus / Minus

                                                                          
Query: 246    agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 305
              |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||
Sbjct: 141541 agaggcggtcggcgatgacctggttggcagcgtcggaggtgtggtaggcgtcccagaaca 141482

                                                                          
Query: 306    cgtacgccttgcggtcgcggcagggcgtcgagtccggcaggcagaggcccccgaccttgg 365
              || ||||| ||||||||  |||| ||  ||    ||||||||| || || || ||| | |
Sbjct: 141481 cgaacgccgtgcggtcgtcgcagagctgcgccgtcggcaggcacagcccgcccaccgtcg 141422

                                                                          
Query: 366    tgtccacgccgcagcacgacgtgtcggacgtcgtgaacccgtttctctgcgggtggtcga 425
              |||||||| |||||||||||||||  |||||| |||||||||   |||||||||| ||||
Sbjct: 141421 tgtccacgtcgcagcacgacgtgtgcgacgtcttgaacccgtacttctgcgggtgctcga 141362

                                     
Query: 426    tgagctccttgacgacggagtag 448
              |||||||| ||||||||||||||
Sbjct: 141361 tgagctccatgacgacggagtag 141339
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>dbj|AP005527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0603C10
          Length = 187620

 Score =  172 bits (87), Expect = 6e-40
 Identities = 174/203 (85%)
 Strand = Plus / Minus

                                                                         
Query: 246   agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 305
             |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||
Sbjct: 42683 agaggcggtcggcgatgacctggttggcagcgtcggaggtgtggtaggcgtcccagaaca 42624

                                                                         
Query: 306   cgtacgccttgcggtcgcggcagggcgtcgagtccggcaggcagaggcccccgaccttgg 365
             || ||||| ||||||||  |||| ||  ||    ||||||||| || || || ||| | |
Sbjct: 42623 cgaacgccgtgcggtcgtcgcagagctgcgccgtcggcaggcacagcccgcccaccgtcg 42564

                                                                         
Query: 366   tgtccacgccgcagcacgacgtgtcggacgtcgtgaacccgtttctctgcgggtggtcga 425
             |||||||| |||||||||||||||  |||||| |||||||||   |||||||||| ||||
Sbjct: 42563 tgtccacgtcgcagcacgacgtgtgcgacgtcttgaacccgtacttctgcgggtgctcga 42504

                                    
Query: 426   tgagctccttgacgacggagtag 448
             |||||||| ||||||||||||||
Sbjct: 42503 tgagctccatgacgacggagtag 42481
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>dbj|AK108686.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-C04, full
            insert sequence
          Length = 1426

 Score =  172 bits (87), Expect = 6e-40
 Identities = 174/203 (85%)
 Strand = Plus / Minus

                                                                        
Query: 246  agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 305
            |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||
Sbjct: 1088 agaggcggtcggcgatgacctggttggcagcgtcggaggtgtggtaggcgtcccagaaca 1029

                                                                        
Query: 306  cgtacgccttgcggtcgcggcagggcgtcgagtccggcaggcagaggcccccgaccttgg 365
            || ||||| ||||||||  |||| ||  ||    ||||||||| || || || ||| | |
Sbjct: 1028 cgaacgccgtgcggtcgtcgcagagctgcgccgtcggcaggcacagcccgcccaccgtcg 969

                                                                        
Query: 366  tgtccacgccgcagcacgacgtgtcggacgtcgtgaacccgtttctctgcgggtggtcga 425
            |||||||| |||||||||||||||  |||||| |||||||||   |||||||||| ||||
Sbjct: 968  tgtccacgtcgcagcacgacgtgtgcgacgtcttgaacccgtacttctgcgggtgctcga 909

                                   
Query: 426  tgagctccttgacgacggagtag 448
            |||||||| ||||||||||||||
Sbjct: 908  tgagctccatgacgacggagtag 886
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  135 bits (68), Expect = 1e-28
 Identities = 107/120 (89%)
 Strand = Plus / Plus

                                                                            
Query: 238      gccggcccagaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtc 297
                |||| |||||||| |||||| ||||||||| ||||||||||||||| ||||||||| |||
Sbjct: 24130892 gccgtcccagaggaggtcggtgatgacccgattggcggcgtcggagttgtggtacgtgtc 24130951

                                                                            
Query: 298      ccagaacacgtacgccttgcggtcgcggcagggcgtcgagtccggcaggcagaggccccc 357
                |||||| ||| ||||||||||||||| |||||||  ||||| ||||||||| ||||||||
Sbjct: 24130952 ccagaagacgaacgccttgcggtcgctgcagggccgcgagttcggcaggcacaggccccc 24131011



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 266      cggttggcggcgtcggaggtg 286
                |||||||||||||||||||||
Sbjct: 24130839 cggttggcggcgtcggaggtg 24130859
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>dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0028A08
          Length = 150818

 Score =  135 bits (68), Expect = 1e-28
 Identities = 107/120 (89%)
 Strand = Plus / Plus

                                                                         
Query: 238   gccggcccagaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtc 297
             |||| |||||||| |||||| ||||||||| ||||||||||||||| ||||||||| |||
Sbjct: 84378 gccgtcccagaggaggtcggtgatgacccgattggcggcgtcggagttgtggtacgtgtc 84437

                                                                         
Query: 298   ccagaacacgtacgccttgcggtcgcggcagggcgtcgagtccggcaggcagaggccccc 357
             |||||| ||| ||||||||||||||| |||||||  ||||| ||||||||| ||||||||
Sbjct: 84438 ccagaagacgaacgccttgcggtcgctgcagggccgcgagttcggcaggcacaggccccc 84497



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 266   cggttggcggcgtcggaggtg 286
             |||||||||||||||||||||
Sbjct: 84325 cggttggcggcgtcggaggtg 84345
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>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0015P05 map C53961S, complete sequence
          Length = 175121

 Score =  121 bits (61), Expect = 2e-24
 Identities = 73/77 (94%)
 Strand = Plus / Plus

                                                                         
Query: 246   agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 305
             |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 22926 agaggcggtcggcgatgacctggttggcggcgtcggaggtgtggtaggcgtcccagaaca 22985

                              
Query: 306   cgtacgccttgcggtcg 322
             || ||||| ||||||||
Sbjct: 22986 cgaacgccgtgcggtcg 23002



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 411   tctgcgggtggtcgatgagctccttgacgacggagtag 448
             |||||||||| |||||||||||| |||||| |||||||
Sbjct: 23368 tctgcgggtgctcgatgagctccatgacgatggagtag 23405
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  121 bits (61), Expect = 2e-24
 Identities = 73/77 (94%)
 Strand = Plus / Plus

                                                                            
Query: 246      agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 305
                |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 11236568 agaggcggtcggcgatgacctggttggcggcgtcggaggtgtggtaggcgtcccagaaca 11236627

                                 
Query: 306      cgtacgccttgcggtcg 322
                || ||||| ||||||||
Sbjct: 11236628 cgaacgccgtgcggtcg 11236644



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 411      tctgcgggtggtcgatgagctccttgacgacggagtag 448
                |||||||||| |||||||||||| |||||| |||||||
Sbjct: 11237010 tctgcgggtgctcgatgagctccatgacgatggagtag 11237047
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  121 bits (61), Expect = 2e-24
 Identities = 73/77 (94%)
 Strand = Plus / Plus

                                                                            
Query: 246      agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 305
                |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 11315757 agaggcggtcggcgatgacctggttggcggcgtcggaggtgtggtaggcgtcccagaaca 11315816

                                 
Query: 306      cgtacgccttgcggtcg 322
                || ||||| ||||||||
Sbjct: 11315817 cgaacgccgtgcggtcg 11315833



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 411      tctgcgggtggtcgatgagctccttgacgacggagtag 448
                |||||||||| |||||||||||| |||||| |||||||
Sbjct: 11316199 tctgcgggtgctcgatgagctccatgacgatggagtag 11316236
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Plus

                                                                           
Query: 246     agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 305
               |||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||
Sbjct: 3589577 agaggcggtcggcgatgacctggttggcggcgtcagaggtgtggtaggcgtcccagaaca 3589636

                             
Query: 306     cgtacgccttgcgg 319
               || ||||| |||||
Sbjct: 3589637 cgaacgccgtgcgg 3589650



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                     
Query: 411     tctgcgggtggtcgatgagctccttgacgacggagtag 448
               |||||||||| |||||||||||| |||||| |||||||
Sbjct: 3589879 tctgcgggtgctcgatgagctccatgacgatggagtag 3589916



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 194      gcgccggcgcgaggagccggag 215
                ||||||||||||||||||||||
Sbjct: 31107353 gcgccggcgcgaggagccggag 31107332



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 286      gtggtacgcgtcccagaacacgtac 310
                |||||||| ||||||||||||||||
Sbjct: 11035026 gtggtacgggtcccagaacacgtac 11035002
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Plus

                                                                           
Query: 246     agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 305
               |||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||
Sbjct: 3589688 agaggcggtcggcgatgacctggttggcggcgtcagaggtgtggtaggcgtcccagaaca 3589747

                             
Query: 306     cgtacgccttgcgg 319
               || ||||| |||||
Sbjct: 3589748 cgaacgccgtgcgg 3589761



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                     
Query: 411     tctgcgggtggtcgatgagctccttgacgacggagtag 448
               |||||||||| |||||||||||| |||||| |||||||
Sbjct: 3589990 tctgcgggtgctcgatgagctccatgacgatggagtag 3590027



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 194      gcgccggcgcgaggagccggag 215
                ||||||||||||||||||||||
Sbjct: 31197876 gcgccggcgcgaggagccggag 31197855



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 286      gtggtacgcgtcccagaacacgtac 310
                |||||||| ||||||||||||||||
Sbjct: 11031789 gtggtacgggtcccagaacacgtac 11031765
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>gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0026H19,
              complete sequence
          Length = 150620

 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Plus

                                                                          
Query: 246    agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 305
              |||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||
Sbjct: 107230 agaggcggtcggcgatgacctggttggcggcgtcagaggtgtggtaggcgtcccagaaca 107289

                            
Query: 306    cgtacgccttgcgg 319
              || ||||| |||||
Sbjct: 107290 cgaacgccgtgcgg 107303



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                    
Query: 411    tctgcgggtggtcgatgagctccttgacgacggagtag 448
              |||||||||| |||||||||||| |||||| |||||||
Sbjct: 107532 tctgcgggtgctcgatgagctccatgacgatggagtag 107569
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>ref|NM_188691.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 717

 Score =  105 bits (53), Expect = 1e-19
 Identities = 71/77 (92%)
 Strand = Plus / Minus

                                                                       
Query: 246 agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 305
           |||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||
Sbjct: 571 agaggcggtcggcgatgacctggttggtggcgtcggaggtgtggtaggcgtcccagaaca 512

                            
Query: 306 cgtacgccttgcggtcg 322
           || ||| | ||||||||
Sbjct: 511 cgaacgtcgtgcggtcg 495



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 411 tctgcgggtggtcgatgagctccttgacgacggagtag 448
           |||||||||| |||||||||||| |||||| |||||||
Sbjct: 457 tctgcgggtgctcgatgagctccatgacgatggagtag 420
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  105 bits (53), Expect = 1e-19
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                           
Query: 246     agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 305
               |||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||
Sbjct: 7660192 agaggcggtcggcgatgacctggttggtggcgtcggaggtgtggtaggcgtcccagaaca 7660251

                                
Query: 306     cgtacgccttgcggtcg 322
               || ||| | ||||||||
Sbjct: 7660252 cgaacgtcgtgcggtcg 7660268



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                     
Query: 411     tctgcgggtggtcgatgagctccttgacgacggagtag 448
               |||||||||| |||||||||||| |||||| |||||||
Sbjct: 7660624 tctgcgggtgctcgatgagctccatgacgatggagtag 7660661
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>dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0086P08
          Length = 145312

 Score =  105 bits (53), Expect = 1e-19
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                         
Query: 246   agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 305
             |||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||
Sbjct: 70768 agaggcggtcggcgatgacctggttggtggcgtcggaggtgtggtaggcgtcccagaaca 70827

                              
Query: 306   cgtacgccttgcggtcg 322
             || ||| | ||||||||
Sbjct: 70828 cgaacgtcgtgcggtcg 70844



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 411   tctgcgggtggtcgatgagctccttgacgacggagtag 448
             |||||||||| |||||||||||| |||||| |||||||
Sbjct: 71200 tctgcgggtgctcgatgagctccatgacgatggagtag 71237
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>dbj|AK062747.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-F10, full
           insert sequence
          Length = 647

 Score =  105 bits (53), Expect = 1e-19
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                       
Query: 246 agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 305
           |||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||
Sbjct: 381 agaggcggtcggcgatgacctggttggtggcgtcggaggtgtggtaggcgtcccagaaca 440

                            
Query: 306 cgtacgccttgcggtcg 322
           || ||| | ||||||||
Sbjct: 441 cgaacgtcgtgcggtcg 457
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>ref|XM_483067.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1470

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                              
Query: 238 gccggcccagaggcggtcggcgatgacccggttggcggcgtcggaggtgtg 288
           |||| |||||||| |||||| ||||||||| ||||||||||||||| ||||
Sbjct: 907 gccgtcccagaggaggtcggtgatgacccgattggcggcgtcggagttgtg 957



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 266 cggttggcggcgtcggaggtg 286
           |||||||||||||||||||||
Sbjct: 854 cggttggcggcgtcggaggtg 874
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>ref|NM_102707.2| Arabidopsis thaliana carboxylic ester hydrolase/ hydrolase, acting on
            ester bonds AT1G29670 mRNA, complete cds
          Length = 1609

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 293  gcgtcccagaacacgtacgccttgcggtc 321
            |||||||||||||||||||| ||||||||
Sbjct: 1059 gcgtcccagaacacgtacgcattgcggtc 1031
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>ref|NM_102708.2| Arabidopsis thaliana unknown protein AT1G29680 mRNA, complete cds
          Length = 1127

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 293  gcgtcccagaacacgtacgccttgcggtc 321
            |||||||||||||||||||| ||||||||
Sbjct: 1036 gcgtcccagaacacgtacgcattgcggtc 1064
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>gb|AY065046.1| Arabidopsis thaliana At1g29670/F15D2_22 mRNA, complete cds
          Length = 1289

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 293  gcgtcccagaacacgtacgccttgcggtc 321
            |||||||||||||||||||| ||||||||
Sbjct: 1059 gcgtcccagaacacgtacgcattgcggtc 1031
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>emb|BX815677.1|CNS0AE1G Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS82ZH03 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1241

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 293  gcgtcccagaacacgtacgccttgcggtc 321
            |||||||||||||||||||| ||||||||
Sbjct: 1018 gcgtcccagaacacgtacgcattgcggtc 990
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>emb|BX816814.1|CNS0ABMA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH6ZB02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1158

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 293 gcgtcccagaacacgtacgccttgcggtc 321
           |||||||||||||||||||| ||||||||
Sbjct: 967 gcgtcccagaacacgtacgcattgcggtc 939
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>gb|AC068667.6|AC068667 Arabidopsis thaliana chromosome 1 BAC F15D2 genomic sequence, complete
              sequence
          Length = 130653

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                           
Query: 293    gcgtcccagaacacgtacgccttgcggtc 321
              |||||||||||||||||||| ||||||||
Sbjct: 120035 gcgtcccagaacacgtacgcattgcggtc 120007
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>gb|AY086296.1| Arabidopsis thaliana clone 23556 mRNA, complete sequence
          Length = 1275

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 293  gcgtcccagaacacgtacgccttgcggtc 321
            |||||||||||||||||||| ||||||||
Sbjct: 1060 gcgtcccagaacacgtacgcattgcggtc 1032
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>gb|AC091732.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0091O09, complete sequence
          Length = 123427

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 414   gcgggtggtcgatgagctccttg 436
             |||||||||||||||||||||||
Sbjct: 25688 gcgggtggtcgatgagctccttg 25710
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>gb|AC124213.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNAa0019N10, from chromosome 10, complete sequence
          Length = 148704

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 414    gcgggtggtcgatgagctccttg 436
              |||||||||||||||||||||||
Sbjct: 114392 gcgggtggtcgatgagctccttg 114414
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 414      gcgggtggtcgatgagctccttg 436
                |||||||||||||||||||||||
Sbjct: 11968710 gcgggtggtcgatgagctccttg 11968732



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 286      gtggtacgcgtcccagaacacgtacgccttgcggtcg 322
                |||||| ||||||||||||||||| || | |||||||
Sbjct: 16557945 gtggtaggcgtcccagaacacgtaggcgtcgcggtcg 16557909
to top
>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0525F01
          Length = 151668

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 268   gttggcggcgtcggaggtgtggtacgcgtcccagaacacgtac 310
             |||||||  ||||| || ||||||| |||||||||||||||||
Sbjct: 78102 gttggcgcggtcggtggggtggtactcgtcccagaacacgtac 78060
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 414      gcgggtggtcgatgagctccttg 436
                |||||||||||||||||||||||
Sbjct: 11976050 gcgggtggtcgatgagctccttg 11976072



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 286      gtggtacgcgtcccagaacacgtacgccttgcggtcg 322
                |||||| ||||||||||||||||| || | |||||||
Sbjct: 16566186 gtggtaggcgtcccagaacacgtaggcgtcgcggtcg 16566150
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>ref|XM_469846.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1362

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 194 gcgccggcgcgaggagccggag 215
           ||||||||||||||||||||||
Sbjct: 31  gcgccggcgcgaggagccggag 10
to top
>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete
             sequence
          Length = 128017

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 194   gcgccggcgcgaggagccggag 215
             ||||||||||||||||||||||
Sbjct: 27994 gcgccggcgcgaggagccggag 27973
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 209     gccggagccggagagctggcgg 230
               ||||||||||||||||||||||
Sbjct: 3961554 gccggagccggagagctggcgg 3961533
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>dbj|AB099524.1| Oryza sativa (japonica cultivar-group) ORC5 mRNA for origin
           recognition complex 5, complete cds
          Length = 1362

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 194 gcgccggcgcgaggagccggag 215
           ||||||||||||||||||||||
Sbjct: 31  gcgccggcgcgaggagccggag 10
to top
>dbj|AK063449.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-F10, full
           insert sequence
          Length = 2080

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 194 gcgccggcgcgaggagccggag 215
           ||||||||||||||||||||||
Sbjct: 392 gcgccggcgcgaggagccggag 371
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>gb|DQ159935.1| Macaca fascicularis GluR7 (GRIK3) mRNA, complete cds
          Length = 3597

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 418  gtggtcgatgagctccttgac 438
            |||||||||||||||||||||
Sbjct: 1628 gtggtcgatgagctccttgac 1608
to top
>ref|NM_196893.1| Oryza sativa (japonica cultivar-group) putative early nodulin gene
            (Enod) related protein (OSJNBa0071K18.9), mRNA
          Length = 1384

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 286  gtggtacgcgtcccagaacacgtacgccttgcggtcg 322
            |||||| ||||||||||||||||| || | |||||||
Sbjct: 1019 gtggtaggcgtcccagaacacgtaggcgtcgcggtcg 983
to top
>ref|NM_000831.2| Homo sapiens glutamate receptor, ionotropic, kainate 3 (GRIK3), mRNA
          Length = 3733

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 418  gtggtcgatgagctccttgac 438
            |||||||||||||||||||||
Sbjct: 1665 gtggtcgatgagctccttgac 1645
to top
>emb|AJ249210.1|HSA249210 Homo sapiens mRNA for glutamate/kainate receptor subtype GluR7 (GRIK3
            gene)
          Length = 2973

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 418  gtggtcgatgagctccttgac 438
            |||||||||||||||||||||
Sbjct: 1551 gtggtcgatgagctccttgac 1531
to top
>gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, complete sequence
          Length = 167588

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 286   gtggtacgcgtcccagaacacgtac 310
             |||||||| ||||||||||||||||
Sbjct: 98096 gtggtacgggtcccagaacacgtac 98120
to top
>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete
              sequence
          Length = 149758

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                   
Query: 286    gtggtacgcgtcccagaacacgtacgccttgcggtcg 322
              |||||| ||||||||||||||||| || | |||||||
Sbjct: 102297 gtggtaggcgtcccagaacacgtaggcgtcgcggtcg 102333
to top
>emb|AJ299451.1|HSA299451 Homo sapiens mRNA for glutamate receptor 7 (GRIK3 gene)
          Length = 2619

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 418  gtggtcgatgagctccttgac 438
            |||||||||||||||||||||
Sbjct: 1530 gtggtcgatgagctccttgac 1510
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>gb|AC117945.2| Homo sapiens chromosome 1 clone RP4-614N24, complete sequence
          Length = 160557

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 418   gtggtcgatgagctccttgac 438
             |||||||||||||||||||||
Sbjct: 78163 gtggtcgatgagctccttgac 78183
to top
>dbj|AK108201.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C12, full
            insert sequence
          Length = 1375

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 286  gtggtacgcgtcccagaacacgtacgccttgcggtcg 322
            |||||| ||||||||||||||||| || | |||||||
Sbjct: 1031 gtggtaggcgtcccagaacacgtaggcgtcgcggtcg 995
to top
>dbj|AK060625.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-G08, full
            insert sequence
          Length = 1443

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 286  gtggtacgcgtcccagaacacgtac 310
            |||||||| ||||||||||||||||
Sbjct: 1188 gtggtacgggtcccagaacacgtac 1164
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 154     ccgagcctgaaaaggcgccgg 174
               |||||||||||||||||||||
Sbjct: 1977501 ccgagcctgaaaaggcgccgg 1977521
to top
>gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0042B10, from chromosome 3, complete sequence
          Length = 144205

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 286   gtggtacgcgtcccagaacacgtac 310
             |||||||| ||||||||||||||||
Sbjct: 78511 gtggtacgggtcccagaacacgtac 78487
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>gb|U16127.1|HSU16127 Human glutamate/kainate receptor subunit (EAA5) mRNA, complete cds
          Length = 3614

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 418  gtggtcgatgagctccttgac 438
            |||||||||||||||||||||
Sbjct: 1548 gtggtcgatgagctccttgac 1528
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>ref|NM_114900.2| Arabidopsis thaliana carboxylic ester hydrolase/ hydrolase, acting on
            ester bonds AT3G50400 mRNA, complete cds
          Length = 1290

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 287  tggtacgcgtcccagaacac 306
            ||||||||||||||||||||
Sbjct: 1057 tggtacgcgtcccagaacac 1038
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 422     tcgatgagctccttgacgacggag 445
               |||| |||||||||||||||||||
Sbjct: 2408540 tcgacgagctccttgacgacggag 2408517
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>ref|XM_323959.1| Neurospora crassa OR74A predicted protein (NCU04604.1) partial mRNA
          Length = 1647

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 gcgaggagccggagccggag 221
           ||||||||||||||||||||
Sbjct: 913 gcgaggagccggagccggag 932
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>ref|XM_953754.1| Neurospora crassa OR74A hypothetical protein (NCU04604.1) partial
           mRNA
          Length = 1647

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 gcgaggagccggagccggag 221
           ||||||||||||||||||||
Sbjct: 913 gcgaggagccggagccggag 932
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 422     tcgatgagctccttgacgacggag 445
               |||| |||||||||||||||||||
Sbjct: 3623687 tcgacgagctccttgacgacggag 3623664
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>gb|AY386265.1| Bovine papular stomatitis virus strain BV-AR02, complete genome
          Length = 134431

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 377   cagcacgacgtgtcggacgtcgtg 400
             |||||||||||| |||||||||||
Sbjct: 15717 cagcacgacgtgccggacgtcgtg 15740
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>ref|XM_546782.2| PREDICTED: Canis familiaris similar to Protein FAM38A (LOC489662),
           mRNA
          Length = 7861

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 351 ggcccccgaccttggtgtcc 370
           ||||||||||||||||||||
Sbjct: 438 ggcccccgaccttggtgtcc 457
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>gb|AF508154.1| Pseudomonas aeruginosa UDP-GlcNAc C6 dehydratase (wbpM) gene,
           complete cds
          Length = 1998

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 255 cggcgatgacccggttggcg 274
           ||||||||||||||||||||
Sbjct: 613 cggcgatgacccggttggcg 594
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>ref|XM_777437.1| PREDICTED: Strongylocentrotus purpuratus similar to CG10185-PA
           (LOC577193), partial mRNA
          Length = 3422

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 420 ggtcgatgagctccttgacgacgg 443
           ||||||||||||||||||| ||||
Sbjct: 904 ggtcgatgagctccttgaccacgg 881
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>ref|XM_781297.1| PREDICTED: Strongylocentrotus purpuratus similar to CG10185-PA
            (LOC581287), mRNA
          Length = 4827

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 420  ggtcgatgagctccttgacgacgg 443
            ||||||||||||||||||| ||||
Sbjct: 2179 ggtcgatgagctccttgaccacgg 2156
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>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16
          Length = 348642

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 180   cggctggccctggcgcgccggcgcgagg 207
             |||||||||| | |||||||||||||||
Sbjct: 95784 cggctggcccggccgcgccggcgcgagg 95757
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>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14
          Length = 346301

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 180    cggctggccctggcgcgccggcgcgagg 207
              |||||||||| | |||||||||||||||
Sbjct: 168821 cggctggcccggccgcgccggcgcgagg 168794
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 422     tcgatgagctccttgacgacggag 445
               |||| |||||||||||||||||||
Sbjct: 3365073 tcgacgagctccttgacgacggag 3365050
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>emb|BX294139.1| Pirellula sp. strain 1 complete genome; segment 7/24
          Length = 287650

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 113    gccagatcgatcagcatcaa 132
              ||||||||||||||||||||
Sbjct: 174194 gccagatcgatcagcatcaa 174213
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>emb|BX294012.1|NC80A10 Neurospora crassa DNA linkage group V Cosmid contig 80A10
          Length = 161126

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 202    gcgaggagccggagccggag 221
              ||||||||||||||||||||
Sbjct: 146513 gcgaggagccggagccggag 146494
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>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 255    cggcgatgacccggttggcg 274
              ||||||||||||||||||||
Sbjct: 219712 cggcgatgacccggttggcg 219693
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>emb|AL132976.2|ATF11C1 Arabidopsis thaliana DNA chromosome 3, BAC clone F11C1
          Length = 111122

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 287    tggtacgcgtcccagaacac 306
              ||||||||||||||||||||
Sbjct: 106716 tggtacgcgtcccagaacac 106697
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>gb|AF498420.1| Pseudomonas aeruginosa serotype 09 putative O-antigen biosynthesis gene
             cluster, partial sequence
          Length = 16349

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   cggcgatgacccggttggcg 274
             ||||||||||||||||||||
Sbjct: 16119 cggcgatgacccggttggcg 16100
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>gb|AF498417.1| Pseudomonas aeruginosa serotype 06 putative O-antigen biosynthesis gene
             cluster, partial sequence
          Length = 14734

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   cggcgatgacccggttggcg 274
             ||||||||||||||||||||
Sbjct: 14504 cggcgatgacccggttggcg 14485
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>gb|AF498416.1| Pseudomonas aeruginosa serotype 05 putative O-antigen biosynthesis gene
             cluster, partial sequence
          Length = 22381

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   cggcgatgacccggttggcg 274
             ||||||||||||||||||||
Sbjct: 22151 cggcgatgacccggttggcg 22132
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>gb|AF498415.1| Pseudomonas aeruginosa serotype 04 putative O-antigen biosynthesis gene
             cluster, partial sequence
          Length = 14364

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   cggcgatgacccggttggcg 274
             ||||||||||||||||||||
Sbjct: 14134 cggcgatgacccggttggcg 14115
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>gb|AF498414.1| Pseudomonas aeruginosa serotype 03 putative O-antigen biosynthesis gene
             cluster, partial sequence
          Length = 19295

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   cggcgatgacccggttggcg 274
             ||||||||||||||||||||
Sbjct: 19065 cggcgatgacccggttggcg 19046
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>gb|AF498413.1| Pseudomonas aeruginosa serotype 020 putative O-antigen biosynthesis
             gene cluster, partial sequence
          Length = 23952

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   cggcgatgacccggttggcg 274
             ||||||||||||||||||||
Sbjct: 23722 cggcgatgacccggttggcg 23703
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>gb|AF498412.1| Pseudomonas aeruginosa serotype 02 putative O-antigen biosynthesis gene
             cluster, partial sequence
          Length = 22388

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   cggcgatgacccggttggcg 274
             ||||||||||||||||||||
Sbjct: 22158 cggcgatgacccggttggcg 22139
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>gb|AF498411.1| Pseudomonas aeruginosa serotype 019 putative O-antigen biosynthesis
             gene cluster, partial sequence
          Length = 16720

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   cggcgatgacccggttggcg 274
             ||||||||||||||||||||
Sbjct: 16490 cggcgatgacccggttggcg 16471
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>gb|AF498408.1| Pseudomonas aeruginosa serotype 016 putative O-antigen biosynthesis
             gene cluster, partial sequence
          Length = 22368

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   cggcgatgacccggttggcg 274
             ||||||||||||||||||||
Sbjct: 22138 cggcgatgacccggttggcg 22119
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>gb|AF498407.1| Pseudomonas aeruginosa serotype 015 putative O-antigen biosynthesis
             gene cluster, partial sequence
          Length = 22913

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   cggcgatgacccggttggcg 274
             ||||||||||||||||||||
Sbjct: 22683 cggcgatgacccggttggcg 22664
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>gb|AF498405.1| Pseudomonas aeruginosa serotype 014 putative O-antigen biosynthesis
             gene cluster, partial sequence
          Length = 13413

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   cggcgatgacccggttggcg 274
             ||||||||||||||||||||
Sbjct: 13183 cggcgatgacccggttggcg 13164
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>gb|AF498404.1| Pseudomonas aeruginosa serotype 013 putative O-antigen biosynthesis
             gene cluster, partial sequence
          Length = 13401

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   cggcgatgacccggttggcg 274
             ||||||||||||||||||||
Sbjct: 13171 cggcgatgacccggttggcg 13152
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>gb|AF498403.1| Pseudomonas aeruginosa serotype 012 putative O-antigen biosynthesis
             gene cluster, partial sequence
          Length = 24949

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   cggcgatgacccggttggcg 274
             ||||||||||||||||||||
Sbjct: 24719 cggcgatgacccggttggcg 24700
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>gb|AF498402.1| Pseudomonas aeruginosa serotype 011 putative O-antigen biosynthesis
             gene cluster, partial sequence
          Length = 12953

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   cggcgatgacccggttggcg 274
             ||||||||||||||||||||
Sbjct: 12723 cggcgatgacccggttggcg 12704
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>gb|AF498401.1| Pseudomonas aeruginosa serotype 010 putative O-antigen biosynthesis
             gene cluster, partial sequence
          Length = 16720

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   cggcgatgacccggttggcg 274
             ||||||||||||||||||||
Sbjct: 16490 cggcgatgacccggttggcg 16471
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>gb|AF498400.1| Pseudomonas aeruginosa serotype 01 putative O-antigen biosynthesis gene
             cluster, partial sequence
          Length = 17453

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   cggcgatgacccggttggcg 274
             ||||||||||||||||||||
Sbjct: 17223 cggcgatgacccggttggcg 17204
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>gb|U49934.1|BMU49934 Boophilus microplus GP80 precursor, mRNA, partial cds
          Length = 3966

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 428  agctccttgacgacggagta 447
            ||||||||||||||||||||
Sbjct: 1082 agctccttgacgacggagta 1063
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>gb|AC026443.4| Homo sapiens chromosome 5 clone CTD-2296H22, complete sequence
          Length = 118562

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 204   gaggagccggagccggagagctgg 227
             ||||||||| ||||||||||||||
Sbjct: 33416 gaggagccgcagccggagagctgg 33439
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>gb|AE004738.1| Pseudomonas aeruginosa PAO1, section 299 of 529 of the complete
            genome
          Length = 12555

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 255  cggcgatgacccggttggcg 274
            ||||||||||||||||||||
Sbjct: 3443 cggcgatgacccggttggcg 3462
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>gb|AF540991.1| Pseudomonas aeruginosa isolate 2-164 O-antigen biosynthetic locus,
             partial sequence
          Length = 14738

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   cggcgatgacccggttggcg 274
             ||||||||||||||||||||
Sbjct: 14505 cggcgatgacccggttggcg 14486
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>gb|AF540990.1| Pseudomonas aeruginosa isolate 1-60 O-antigen biosynthetic locus,
             partial sequence
          Length = 19104

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   cggcgatgacccggttggcg 274
             ||||||||||||||||||||
Sbjct: 18871 cggcgatgacccggttggcg 18852
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>dbj|AK117654.1| Arabidopsis thaliana At3g50400 mRNA for unknown protein, complete
            cds, clone: RAFL17-31-E14
          Length = 1292

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 287  tggtacgcgtcccagaacac 306
            ||||||||||||||||||||
Sbjct: 1059 tggtacgcgtcccagaacac 1040
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>gb|AF035937.1|AF035937 Pseudomonas aeruginosa strain IATS O6 RpsA (rpsA) gene, partial cds;
             Ihf-Beta, Wzz (wzz), and Wzx (wzx) genes, complete cds;
             and wbp gene cluster for O-antigen biosynthesis, complete
             sequence
          Length = 16736

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   cggcgatgacccggttggcg 274
             ||||||||||||||||||||
Sbjct: 15204 cggcgatgacccggttggcg 15185
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>emb|AJ328447.1|HSA328447 Homo sapiens genomic sequence surrounding NotI site, clone
           HSJ4-AO12RS
          Length = 751

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 198 cggcgcgaggagccggagccggag 221
           |||||||||| |||||||||||||
Sbjct: 230 cggcgcgaggggccggagccggag 253
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>gb|U50396.1|PAU50396 Pseudomonas aeruginosa Wzz (Rol) (wzz (rol)) gene, partial cds, WbpA
             (wbpB), WbpB (wbpB), WbpC (wbpC), WbpD (wbpD), WbpE
             (wbpE), Wzy (Rfc) (wzy (rfc)), Wzx (wzx), HisH (hisH),
             HisF (hisF), WbpG (wbpG), WbpH (wbpH), WbpI (wbpI), WbpJ
             (wbpJ), WbpK (wbpK), WbpL (wbpL), WbpM (wbpM) and WbpN
             (wbpN) genes, complete cds, and UvrB (uvrB) gene, partial
             cds
          Length = 24418

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   cggcgatgacccggttggcg 274
             ||||||||||||||||||||
Sbjct: 20291 cggcgatgacccggttggcg 20272
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>gb|AF285636.1| Burkholderia mallei capsule gene cluster, complete sequence
          Length = 42146

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 422  tcgatgagctccttgacgacggag 445
            |||| |||||||||||||||||||
Sbjct: 1404 tcgacgagctccttgacgacggag 1427


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,383,671
Number of Sequences: 3902068
Number of extensions: 2383671
Number of successful extensions: 49816
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48687
Number of HSP's gapped (non-prelim): 1128
length of query: 448
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 426
effective length of database: 17,147,199,772
effective search space: 7304707102872
effective search space used: 7304707102872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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