Clone Name | rbart28c02 |
---|---|
Clone Library Name | barley_pub |
>gb|BT008959.1| Triticum aestivum clone wdk1c.pk012.i11:fis, full insert mRNA sequence Length = 1300 Score = 525 bits (265), Expect = e-146 Identities = 398/434 (91%), Gaps = 20/434 (4%) Strand = Plus / Minus Query: 4 gaagaaatggtcagttgg-cagtcgacaaagtttacaggctagaaattaacaaaggctgg 62 |||| ||||||||| ||| ||||||||| |||||||| |||||||| ||||||||| Sbjct: 1133 gaagcaatggtcagctgggcagtcgacagagtttacatgctagaaag----aaaggctgg 1078 Query: 63 ttgatgtcaacacacacacgaaaa-tctcaaggtttttcttaaaacatgatgaag---ca 118 |||||||||||||||||||||||| ||||||| ||||||||||||||||||| | || Sbjct: 1077 ttgatgtcaacacacacacgaaaaatctcaag--ttttcttaaaacatgatgatgaaaca 1020 Query: 119 cgcttacagactaggaaggaaactaagccatgaataaatgatatctagaggctgagcgaa 178 |||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||| Sbjct: 1019 cgcttacagactaggaaggaaactaagccatgaataaatggtatctagaggccgggcgaa 960 Query: 179 gat-gcttggttttcctcgcagcaagcgcagc-----tttccccc--cggcgcccacccc 230 ||| ||||||||||||||||||||||||| || ||||| || ||||||| |||| Sbjct: 959 gattgcttggttttcctcgcagcaagcgcggcgcggctttcctcctccggcgccg-cccc 901 Query: 231 gctcatgtcttgaccctcttgttgctgttggagccgccgttggtgcactccgggcaccgg 290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 900 gctcatgtcttgaccctcttgttgctgttggagccgccgttggtgcactccgggcaccgg 841 Query: 291 tagtgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtaccac 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 840 tagtgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtaccac 781 Query: 351 ttctcgcagttgtcgcagcagatccagaactcgtccttgccgtcattggtgccgcaagtc 410 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 780 ttctcgcagttgtcgcagcagatccagaactcgtccttgccgtcgttggtgccgcaggtc 721 Query: 411 ccgcaaagagtgtt 424 ||||| || ||||| Sbjct: 720 ccgcacagggtgtt 707 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 481 tgggggccggcaccttcgcctttgcacggggctcg 515 ||||||| |||||||| |||||||||||||||||| Sbjct: 650 tgggggctggcaccttggcctttgcacggggctcg 616
>gb|AY103945.1| Zea mays PCO073257 mRNA sequence Length = 1241 Score = 163 bits (82), Expect = 7e-37 Identities = 124/138 (89%) Strand = Plus / Minus Query: 269 gttggtgcactccgggcaccggtagtgcttgatgtgctccgcccgggcgggcgtgatctt 328 ||||||||| || |||||| ||| |||||||| ||||| ||||| |||||||||||||| Sbjct: 936 gttggtgcagtctgggcacttgtactgcttgatatgctcggcccgagcgggcgtgatctt 877 Query: 329 gacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaactcgtcctt 388 ||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 876 gacacacttcccgtggtaccacttctcgcagttatcgcagcagatccagaactggtcctt 817 Query: 389 gccgtcattggtgccgca 406 |||||| ||||| ||||| Sbjct: 816 gccgtcgttggtcccgca 799
>ref|NM_190195.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 819 Score = 135 bits (68), Expect = 2e-28 Identities = 116/132 (87%) Strand = Plus / Minus Query: 269 gttggtgcactccgggcaccggtagtgcttgatgtgctccgcccgggcgggcgtgatctt 328 ||||||||| ||||||||| ||| |||||||| ||||| || || ||||| |||||||| Sbjct: 801 gttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggtgtgatctt 742 Query: 329 gacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaactcgtcctt 388 ||||||||| || || ||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 741 gacgcacttcccatgataccacttctcgcagttatcgcaacagatccagaactcgtcctt 682 Query: 389 gccgtcattggt 400 ||| || ||||| Sbjct: 681 gccatcgttggt 670
>ref|XM_479105.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1168 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 294 tgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtaccacttc 353 |||||||||||||||||| ||| || |||||||||||||||||||||||| |||||||| Sbjct: 778 tgcttgatgtgctccgccttggccggggtgatcttgacgcacttgccgtggaaccacttc 719 Query: 354 tcgcagttgtcgcagcagatccagaactcgtc 385 |||||| ||||||||||||||||||||||||| Sbjct: 718 tcgcagatgtcgcagcagatccagaactcgtc 687
>gb|AC079038.3|AC079038 Oryza sativa chromosome 7 clone OSJNBb0024A20, complete sequence Length = 129838 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 294 tgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtaccacttc 353 |||||||||||||||||| ||| || |||||||||||||||||||||||| |||||||| Sbjct: 125349 tgcttgatgtgctccgccttggccggggtgatcttgacgcacttgccgtggaaccacttc 125408 Query: 354 tcgcagttgtcgcagcagatccagaactcgtc 385 |||||| ||||||||||||||||||||||||| Sbjct: 125409 tcgcagatgtcgcagcagatccagaactcgtc 125440
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 294 tgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtaccacttc 353 |||||||||||||||||| ||| || |||||||||||||||||||||||| |||||||| Sbjct: 24963804 tgcttgatgtgctccgccttggccggggtgatcttgacgcacttgccgtggaaccacttc 24963745 Query: 354 tcgcagttgtcgcagcagatccagaactcgtc 385 |||||| ||||||||||||||||||||||||| Sbjct: 24963744 tcgcagatgtcgcagcagatccagaactcgtc 24963713
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 135 bits (68), Expect = 2e-28 Identities = 116/132 (87%) Strand = Plus / Plus Query: 269 gttggtgcactccgggcaccggtagtgcttgatgtgctccgcccgggcgggcgtgatctt 328 ||||||||| ||||||||| ||| |||||||| ||||| || || ||||| |||||||| Sbjct: 38559679 gttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggtgtgatctt 38559738 Query: 329 gacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaactcgtcctt 388 ||||||||| || || ||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 38559739 gacgcacttcccatgataccacttctcgcagttatcgcaacagatccagaactcgtcctt 38559798 Query: 389 gccgtcattggt 400 ||| || ||||| Sbjct: 38559799 gccatcgttggt 38559810
>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0072I06 Length = 162411 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 294 tgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtaccacttc 353 |||||||||||||||||| ||| || |||||||||||||||||||||||| |||||||| Sbjct: 147436 tgcttgatgtgctccgccttggccggggtgatcttgacgcacttgccgtggaaccacttc 147377 Query: 354 tcgcagttgtcgcagcagatccagaactcgtc 385 |||||| ||||||||||||||||||||||||| Sbjct: 147376 tcgcagatgtcgcagcagatccagaactcgtc 147345
>gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa0048I01, complete sequence Length = 193444 Score = 135 bits (68), Expect = 2e-28 Identities = 116/132 (87%) Strand = Plus / Plus Query: 269 gttggtgcactccgggcaccggtagtgcttgatgtgctccgcccgggcgggcgtgatctt 328 ||||||||| ||||||||| ||| |||||||| ||||| || || ||||| |||||||| Sbjct: 152760 gttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggtgtgatctt 152819 Query: 329 gacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaactcgtcctt 388 ||||||||| || || ||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 152820 gacgcacttcccatgataccacttctcgcagttatcgcaacagatccagaactcgtcctt 152879 Query: 389 gccgtcattggt 400 ||| || ||||| Sbjct: 152880 gccatcgttggt 152891
>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0434C04 Length = 150064 Score = 135 bits (68), Expect = 2e-28 Identities = 116/132 (87%) Strand = Plus / Plus Query: 269 gttggtgcactccgggcaccggtagtgcttgatgtgctccgcccgggcgggcgtgatctt 328 ||||||||| ||||||||| ||| |||||||| ||||| || || ||||| |||||||| Sbjct: 80360 gttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggtgtgatctt 80419 Query: 329 gacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaactcgtcctt 388 ||||||||| || || ||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 80420 gacgcacttcccatgataccacttctcgcagttatcgcaacagatccagaactcgtcctt 80479 Query: 389 gccgtcattggt 400 ||| || ||||| Sbjct: 80480 gccatcgttggt 80491
>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1099D03 Length = 191022 Score = 135 bits (68), Expect = 2e-28 Identities = 116/132 (87%) Strand = Plus / Plus Query: 269 gttggtgcactccgggcaccggtagtgcttgatgtgctccgcccgggcgggcgtgatctt 328 ||||||||| ||||||||| ||| |||||||| ||||| || || ||||| |||||||| Sbjct: 17652 gttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggtgtgatctt 17711 Query: 329 gacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaactcgtcctt 388 ||||||||| || || ||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 17712 gacgcacttcccatgataccacttctcgcagttatcgcaacagatccagaactcgtcctt 17771 Query: 389 gccgtcattggt 400 ||| || ||||| Sbjct: 17772 gccatcgttggt 17783
>dbj|AP005895.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0018L13 Length = 131155 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 294 tgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtaccacttc 353 |||||||||||||||||| ||| || |||||||||||||||||||||||| |||||||| Sbjct: 4484 tgcttgatgtgctccgccttggccggggtgatcttgacgcacttgccgtggaaccacttc 4425 Query: 354 tcgcagttgtcgcagcagatccagaactcgtc 385 |||||| ||||||||||||||||||||||||| Sbjct: 4424 tcgcagatgtcgcagcagatccagaactcgtc 4393
>dbj|AK109447.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-H11, full insert sequence Length = 1220 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 294 tgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtaccacttc 353 |||||||||||||||||| ||| || |||||||||||||||||||||||| |||||||| Sbjct: 830 tgcttgatgtgctccgccttggccggggtgatcttgacgcacttgccgtggaaccacttc 771 Query: 354 tcgcagttgtcgcagcagatccagaactcgtc 385 |||||| ||||||||||||||||||||||||| Sbjct: 770 tcgcagatgtcgcagcagatccagaactcgtc 739
>dbj|AK071139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082D05, full insert sequence Length = 1296 Score = 135 bits (68), Expect = 2e-28 Identities = 116/132 (87%) Strand = Plus / Minus Query: 269 gttggtgcactccgggcaccggtagtgcttgatgtgctccgcccgggcgggcgtgatctt 328 ||||||||| ||||||||| ||| |||||||| ||||| || || ||||| |||||||| Sbjct: 1025 gttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggtgtgatctt 966 Query: 329 gacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaactcgtcctt 388 ||||||||| || || ||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 965 gacgcacttcccatgataccacttctcgcagttatcgcaacagatccagaactcgtcctt 906 Query: 389 gccgtcattggt 400 ||| || ||||| Sbjct: 905 gccatcgttggt 894
>dbj|AK058384.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-H10, full insert sequence Length = 576 Score = 135 bits (68), Expect = 2e-28 Identities = 116/132 (87%) Strand = Plus / Minus Query: 269 gttggtgcactccgggcaccggtagtgcttgatgtgctccgcccgggcgggcgtgatctt 328 ||||||||| ||||||||| ||| |||||||| ||||| || || ||||| |||||||| Sbjct: 395 gttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggtgtgatctt 336 Query: 329 gacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaactcgtcctt 388 ||||||||| || || ||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 335 gacgcacttcccatgataccacttctcgcagttatcgcaacagatccagaactcgtcctt 276 Query: 389 gccgtcattggt 400 ||| || ||||| Sbjct: 275 gccatcgttggt 264
>gb|AF133118.1|AF133118 Oryza sativa nucleic acid binding protein (NBP) gene, complete cds Length = 5552 Score = 135 bits (68), Expect = 2e-28 Identities = 116/132 (87%) Strand = Plus / Minus Query: 269 gttggtgcactccgggcaccggtagtgcttgatgtgctccgcccgggcgggcgtgatctt 328 ||||||||| ||||||||| ||| |||||||| ||||| || || ||||| |||||||| Sbjct: 5084 gttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggtgtgatctt 5025 Query: 329 gacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaactcgtcctt 388 ||||||||| || || ||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 5024 gacgcacttcccatgataccacttctcgcagttatcgcaacagatccagaactcgtcctt 4965 Query: 389 gccgtcattggt 400 ||| || ||||| Sbjct: 4964 gccatcgttggt 4953
>gb|AF047428.1|AF047428 Oryza sativa nucleic acid binding protein mRNA, complete cds Length = 1156 Score = 135 bits (68), Expect = 2e-28 Identities = 116/132 (87%) Strand = Plus / Minus Query: 269 gttggtgcactccgggcaccggtagtgcttgatgtgctccgcccgggcgggcgtgatctt 328 ||||||||| ||||||||| ||| |||||||| ||||| || || ||||| |||||||| Sbjct: 913 gttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggtgtgatctt 854 Query: 329 gacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaactcgtcctt 388 ||||||||| || || ||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 853 gacgcacttcccatgataccacttctcgcagttatcgcaacagatccagaactcgtcctt 794 Query: 389 gccgtcattggt 400 ||| || ||||| Sbjct: 793 gccatcgttggt 782
>gb|AF045571.1|AF045571 Oryza sativa nucleic acid binding protein mRNA, complete cds Length = 1125 Score = 135 bits (68), Expect = 2e-28 Identities = 116/132 (87%) Strand = Plus / Minus Query: 269 gttggtgcactccgggcaccggtagtgcttgatgtgctccgcccgggcgggcgtgatctt 328 ||||||||| ||||||||| ||| |||||||| ||||| || || ||||| |||||||| Sbjct: 912 gttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggtgtgatctt 853 Query: 329 gacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaactcgtcctt 388 ||||||||| || || ||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 852 gacgcacttcccatgataccacttctcgcagttatcgcaacagatccagaactcgtcctt 793 Query: 389 gccgtcattggt 400 ||| || ||||| Sbjct: 792 gccatcgttggt 781
>dbj|AK058498.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-F01, full insert sequence Length = 323 Score = 133 bits (67), Expect = 6e-28 Identities = 109/123 (88%) Strand = Plus / Minus Query: 269 gttggtgcactccgggcaccggtagtgcttgatgtgctccgcccgggcgggcgtgatctt 328 ||||||||| ||||||||| ||| |||||||| ||||| || || ||||| |||||||| Sbjct: 128 gttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggtgtgatctt 69 Query: 329 gacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaactcgtcctt 388 ||||||||| || || ||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 68 gacgcacttcccatgataccacttctcgcagttatcgcaacagatccagaactcgtcctt 9 Query: 389 gcc 391 ||| Sbjct: 8 gcc 6
>gb|BT009102.1| Triticum aestivum clone wkm2n.pk004.d7:fis, full insert mRNA sequence Length = 1221 Score = 125 bits (63), Expect = 2e-25 Identities = 96/107 (89%) Strand = Plus / Minus Query: 281 cgggcaccggtagtgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgcc 340 ||||||| ||| |||||||||||||||||| ||| |||||||||||||| |||||||| Sbjct: 890 cgggcacttgtactgcttgatgtgctccgccttggccggcgtgatcttgacacacttgcc 831 Query: 341 gtggtaccacttctcgcagttgtcgcagcagatccagaactcgtcct 387 |||| ||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 830 gtggaaccacttctcgcacatgtcgcagccgatccagaactcgtcct 784
>gb|AY110004.1| Zea mays CL16185_1 mRNA sequence Length = 1230 Score = 113 bits (57), Expect = 6e-22 Identities = 93/105 (88%) Strand = Plus / Plus Query: 281 cgggcaccggtagtgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgcc 340 ||||||| ||| |||||||||||||| ||| ||| | ||||||||||||||||||||| Sbjct: 197 cgggcacttgtactgcttgatgtgctcggccttggccgccgtgatcttgacgcacttgcc 256 Query: 341 gtggtaccacttctcgcagttgtcgcagcagatccagaactcgtc 385 |||| |||||||||||||| ||||||||||||||| |||||||| Sbjct: 257 gtggaaccacttctcgcagaggtcgcagcagatccaaaactcgtc 301
>gb|AY108533.1| Zea mays PCO147142 mRNA sequence Length = 1128 Score = 95.6 bits (48), Expect = 1e-16 Identities = 93/108 (86%) Strand = Plus / Minus Query: 290 gtagtgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtacca 349 |||||||||||||||||| || || || |||||||||||||| ||||| || |||||||| Sbjct: 827 gtagtgcttgatgtgctcagctcgtgcaggcgtgatcttgacacacttcccatggtacca 768 Query: 350 cttctcgcagttgtcgcagcagatccagaactcgtccttgccgtcatt 397 | |||||| | || || ||||||||||| ||||||||||||||||| Sbjct: 767 ccgctcgcaactatcacaacagatccagaattcgtccttgccgtcatt 720
>ref|XM_475643.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 777 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 321 gtgatcttgacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaac 380 |||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| Sbjct: 707 gtgatcttgacgcacttgccgtggtaccacctctcgcacacgtcgcagccgatccagaac 648 Query: 381 tcgtc 385 ||||| Sbjct: 647 tcgtc 643
>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099P06, complete sequence Length = 135117 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 321 gtgatcttgacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaac 380 |||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| Sbjct: 60158 gtgatcttgacgcacttgccgtggtaccacctctcgcacacgtcgcagccgatccagaac 60217 Query: 381 tcgtc 385 ||||| Sbjct: 60218 tcgtc 60222
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 321 gtgatcttgacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaac 380 |||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| Sbjct: 3637811 gtgatcttgacgcacttgccgtggtaccacctctcgcacacgtcgcagccgatccagaac 3637870 Query: 381 tcgtc 385 ||||| Sbjct: 3637871 tcgtc 3637875
>dbj|AK071548.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023104P18, full insert sequence Length = 1109 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 321 gtgatcttgacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaac 380 |||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| Sbjct: 812 gtgatcttgacgcacttgccgtggtaccacctctcgcacacgtcgcagccgatccagaac 753 Query: 381 tcgtc 385 ||||| Sbjct: 752 tcgtc 748
>dbj|AK061479.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G07, full insert sequence Length = 1172 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 321 gtgatcttgacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaac 380 |||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| Sbjct: 731 gtgatcttgacgcacttgccgtggtaccacctctcgcacacgtcgcagccgatccagaac 672 Query: 381 tcgtc 385 ||||| Sbjct: 671 tcgtc 667
>ref|XM_466276.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1196 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 294 tgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtaccacttc 353 |||||||||||||| ||| || || |||||| ||||||||||| ||| |||||||| Sbjct: 833 tgcttgatgtgctctgccttcgcaggggtgatccgaacgcacttgccatggaaccacttc 774 Query: 354 tcgcagttgtcgcagcagatccagaactc 382 |||||| ||||||||||||||||||||| Sbjct: 773 tcgcagacgtcgcagcagatccagaactc 745
>ref|XM_506831.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1712_E04.22 mRNA Length = 1213 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 294 tgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtaccacttc 353 |||||||||||||| ||| || || |||||| ||||||||||| ||| |||||||| Sbjct: 845 tgcttgatgtgctctgccttcgcaggggtgatccgaacgcacttgccatggaaccacttc 786 Query: 354 tcgcagttgtcgcagcagatccagaactc 382 |||||| ||||||||||||||||||||| Sbjct: 785 tcgcagacgtcgcagcagatccagaactc 757
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 294 tgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtaccacttc 353 |||||||||||||| ||| || || |||||| ||||||||||| ||| |||||||| Sbjct: 21436221 tgcttgatgtgctctgccttcgcaggggtgatccgaacgcacttgccatggaaccacttc 21436162 Query: 354 tcgcagttgtcgcagcagatccagaactc 382 |||||| ||||||||||||||||||||| Sbjct: 21436161 tcgcagacgtcgcagcagatccagaactc 21436133
>dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020C11 Length = 163328 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 294 tgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtaccacttc 353 |||||||||||||| ||| || || |||||| ||||||||||| ||| |||||||| Sbjct: 31148 tgcttgatgtgctctgccttcgcaggggtgatccgaacgcacttgccatggaaccacttc 31089 Query: 354 tcgcagttgtcgcagcagatccagaactc 382 |||||| ||||||||||||||||||||| Sbjct: 31088 tcgcagacgtcgcagcagatccagaactc 31060
>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1712_E04 Length = 110098 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 294 tgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtaccacttc 353 |||||||||||||| ||| || || |||||| ||||||||||| ||| |||||||| Sbjct: 96174 tgcttgatgtgctctgccttcgcaggggtgatccgaacgcacttgccatggaaccacttc 96115 Query: 354 tcgcagttgtcgcagcagatccagaactc 382 |||||| ||||||||||||||||||||| Sbjct: 96114 tcgcagacgtcgcagcagatccagaactc 96086
>dbj|AK105951.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-D01, full insert sequence Length = 1196 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 294 tgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtaccacttc 353 |||||||||||||| ||| || || |||||| ||||||||||| ||| |||||||| Sbjct: 833 tgcttgatgtgctctgccttcgcaggggtgatccgaacgcacttgccatggaaccacttc 774 Query: 354 tcgcagttgtcgcagcagatccagaactc 382 |||||| ||||||||||||||||||||| Sbjct: 773 tcgcagacgtcgcagcagatccagaactc 745
>dbj|AK073526.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046L10, full insert sequence Length = 1213 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 294 tgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtaccacttc 353 |||||||||||||| ||| || || |||||| ||||||||||| ||| |||||||| Sbjct: 845 tgcttgatgtgctctgccttcgcaggggtgatccgaacgcacttgccatggaaccacttc 786 Query: 354 tcgcagttgtcgcagcagatccagaactc 382 |||||| ||||||||||||||||||||| Sbjct: 785 tcgcagacgtcgcagcagatccagaactc 757
>ref|XM_470117.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1157 Score = 69.9 bits (35), Expect = 8e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 290 gtagtgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtacca 349 |||||||||||||||||||||| || || || ||| ||||||| ||||||||| |||| Sbjct: 794 gtagtgcttgatgtgctccgccttagccggggttatcctgacgcatttgccgtggaacca 735 Query: 350 cttctcgcagttgtcgcagcagatccagaactcgt 384 | ||| ||| ||||||| | |||||||||||||| Sbjct: 734 ccgctcacagatgtcgcacccgatccagaactcgt 700
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 69.9 bits (35), Expect = 8e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 290 gtagtgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtacca 349 |||||||||||||||||||||| || || || ||| ||||||| ||||||||| |||| Sbjct: 34039659 gtagtgcttgatgtgctccgccttagccggggttatcctgacgcatttgccgtggaacca 34039718 Query: 350 cttctcgcagttgtcgcagcagatccagaactcgt 384 | ||| ||| ||||||| | |||||||||||||| Sbjct: 34039719 ccgctcacagatgtcgcacccgatccagaactcgt 34039753
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 69.9 bits (35), Expect = 8e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 290 gtagtgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtacca 349 |||||||||||||||||||||| || || || ||| ||||||| ||||||||| |||| Sbjct: 34130131 gtagtgcttgatgtgctccgccttagccggggttatcctgacgcatttgccgtggaacca 34130190 Query: 350 cttctcgcagttgtcgcagcagatccagaactcgt 384 | ||| ||| ||||||| | |||||||||||||| Sbjct: 34130191 ccgctcacagatgtcgcacccgatccagaactcgt 34130225
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 69.9 bits (35), Expect = 8e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 290 gtagtgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtacca 349 |||||||||||||||||||||| || || || ||| ||||||| ||||||||| |||| Sbjct: 3471 gtagtgcttgatgtgctccgccttagccggggttatcctgacgcatttgccgtggaacca 3530 Query: 350 cttctcgcagttgtcgcagcagatccagaactcgt 384 | ||| ||| ||||||| | |||||||||||||| Sbjct: 3531 ccgctcacagatgtcgcacccgatccagaactcgt 3565
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 69.9 bits (35), Expect = 8e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 290 gtagtgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtacca 349 |||||||||||||||||||||| || || || ||| ||||||| ||||||||| |||| Sbjct: 18032 gtagtgcttgatgtgctccgccttagccggggttatcctgacgcatttgccgtggaacca 17973 Query: 350 cttctcgcagttgtcgcagcagatccagaactcgt 384 | ||| ||| ||||||| | |||||||||||||| Sbjct: 17972 ccgctcacagatgtcgcacccgatccagaactcgt 17938
>dbj|AK103363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126N11, full insert sequence Length = 1202 Score = 69.9 bits (35), Expect = 8e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 290 gtagtgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtacca 349 |||||||||||||||||||||| || || || ||| ||||||| ||||||||| |||| Sbjct: 804 gtagtgcttgatgtgctccgccttagccggggttatcctgacgcatttgccgtggaacca 745 Query: 350 cttctcgcagttgtcgcagcagatccagaactcgt 384 | ||| ||| ||||||| | |||||||||||||| Sbjct: 744 ccgctcacagatgtcgcacccgatccagaactcgt 710
>gb|AY104096.1| Zea mays PCO134301 mRNA sequence Length = 674 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 274 tgcactccgggcaccggtagtgcttgatgtgctccgcccgggcgggcgtgatcttgacgc 333 |||| ||||||||| ||||||||| ||||| ||||| ||| || |||||| |||| Sbjct: 280 tgcagtccgggcacttgtagtgctttatgtggtccgctttggcaggggtgatccgcacgc 221 Query: 334 acttgccgtggtaccacttctcgcagttgtcgcagcagatccagaactcgt 384 |||| |||||| ||||| ||||||| ||||||||| |||||||||||||| Sbjct: 220 acttcccgtggaaccaccgctcgcagatgtcgcagccgatccagaactcgt 170
>gb|AY111838.1| Zea mays CL29063_1 mRNA sequence Length = 871 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 321 gtgatcttgacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaac 380 |||||||| ||||||||||| ||||||||||||||||| |||||| | |||||||||| Sbjct: 396 gtgatcttcacgcacttgccatggtaccacttctcgcacacgtcgcacccgatccagaac 455 Query: 381 tc 382 || Sbjct: 456 tc 457
>gb|BT017746.1| Zea mays clone EL01N0449H05.c mRNA sequence Length = 1198 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 294 tgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtaccacttc 353 |||||||||||||||||| ||| || ||||| ||| |||||||| ||| |||||||| Sbjct: 849 tgcttgatgtgctccgccttggcaggggtgatgcggacacacttgccatggaaccacttc 790 Query: 354 tcgcagttgtcgcagcagatccagaactc 382 ||||| |||||||||||||||||||| Sbjct: 789 tcgcacacatcgcagcagatccagaactc 761
>gb|AC146308.2| Medicago truncatula clone mth2-10a12, complete sequence Length = 112733 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 294 tgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtaccacttc 353 |||||||| ||||| || || || || |||||||| || || || || ||| |||||||| Sbjct: 82274 tgcttgatatgctcggcacgagcaggagtgatcttcacacattttccatggaaccacttc 82215 Query: 354 tcgcagttgtcgcagcagatccagaactc 382 |||||| |||||||||| ||||||||||| Sbjct: 82214 tcgcagatgtcgcagcaaatccagaactc 82186
>gb|AC137554.15| Medicago truncatula clone mth2-17j18, complete sequence Length = 121248 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 294 tgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtaccacttc 353 |||||||| ||||| || || || || |||||||| || || || || ||| |||||||| Sbjct: 87806 tgcttgatatgctcggcacgagcaggagtgatcttcacacattttccatggaaccacttc 87865 Query: 354 tcgcagttgtcgcagcagatccagaactc 382 |||||| |||||||||| ||||||||||| Sbjct: 87866 tcgcagatgtcgcagcaaatccagaactc 87894
>gb|AY104993.1| Zea mays PCO092577 mRNA sequence Length = 1146 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 294 tgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtaccacttc 353 |||||||||||||||||| ||| || ||||| ||| |||||||| ||| |||||||| Sbjct: 825 tgcttgatgtgctccgccttggcaggggtgatgcggacacacttgccatggaaccacttc 766 Query: 354 tcgcagttgtcgcagcagatccagaactc 382 ||||| |||||||||||||||||||| Sbjct: 765 tcgcacacatcgcagcagatccagaactc 737
>gb|AC138000.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0024M06, complete sequence Length = 51144 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 281 cgggcaccggtagtgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgcc 340 ||||||| |||||||||||||||||| ||| ||| || || |||||||| ||||| || Sbjct: 19973 cgggcacttgtagtgcttgatgtgctcagccttggcaggggttatcttgacacacttacc 19914 Query: 341 gtggtaccacttctcgcagttgtcgcagcagatccagaactcgtcct 387 |||| |||| |||| || |||||||||||||||||||| |||| Sbjct: 19913 gtggaaccatgtctcacaagcatcgcagcagatccagaactcatcct 19867
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 281 cgggcaccggtagtgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgcc 340 ||||||| |||||||||||||||||| ||| ||| || || |||||||| ||||| || Sbjct: 120661 cgggcacttgtagtgcttgatgtgctcagccttggcaggggttatcttgacacacttacc 120602 Query: 341 gtggtaccacttctcgcagttgtcgcagcagatccagaactcgtcct 387 |||| |||| |||| || |||||||||||||||||||| |||| Sbjct: 120601 gtggaaccatgtctcacaagcatcgcagcagatccagaactcatcct 120555
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 281 cgggcaccggtagtgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgcc 340 ||||||| |||||||||||||||||| ||| ||| || || |||||||| ||||| || Sbjct: 7696294 cgggcacttgtagtgcttgatgtgctcagccttggcaggggttatcttgacacacttacc 7696353 Query: 341 gtggtaccacttctcgcagttgtcgcagcagatccagaactcgtcct 387 |||| |||| |||| || |||||||||||||||||||| |||| Sbjct: 7696354 gtggaaccatgtctcacaagcatcgcagcagatccagaactcatcct 7696400
>dbj|AK103215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122M22, full insert sequence Length = 1199 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 281 cgggcaccggtagtgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgcc 340 ||||||| |||||||||||||||||| ||| ||| || || |||||||| ||||| || Sbjct: 826 cgggcacttgtagtgcttgatgtgctcagccttggcaggggttatcttgacacacttacc 767 Query: 341 gtggtaccacttctcgcagttgtcgcagcagatccagaactcgtcct 387 |||| |||| |||| || |||||||||||||||||||| |||| Sbjct: 766 gtggaaccatgtctcacaagcatcgcagcagatccagaactcatcct 720
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 281 cgggcaccggtagtgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgcc 340 ||||||| |||||||||||||||||| ||| ||| || || |||||||| ||||| || Sbjct: 7766381 cgggcacttgtagtgcttgatgtgctcagccttggcaggggttatcttgacacacttacc 7766440 Query: 341 gtggtaccacttctcgcagttgtcgcagcagatccagaactcgtcct 387 |||| |||| |||| || |||||||||||||||||||| |||| Sbjct: 7766441 gtggaaccatgtctcacaagcatcgcagcagatccagaactcatcct 7766487
>gb|BT018462.1| Zea mays clone EL01N0414F09.d mRNA sequence Length = 1086 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 321 gtgatcttgacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaac 380 |||||||| || |||||||||||| |||| ||||||| |||||||||||||||||| Sbjct: 801 gtgatcttaacacacttgccgtggaaccatgtctcgcataggtcgcagcagatccagaag 742 Query: 381 tcgtc 385 ||||| Sbjct: 741 tcgtc 737
>gb|AY111715.1| Zea mays CL12562_1 mRNA sequence Length = 753 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 321 gtgatcttgacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaac 380 ||||||||||| |||||||||||| |||| ||||||| |||||| ||||||||||| Sbjct: 378 gtgatcttgacacacttgccgtggaaccatgtctcgcataagtcgcaacagatccagaag 437 Query: 381 tcgtc 385 ||||| Sbjct: 438 tcgtc 442
>gb|AY108226.1| Zea mays PCO125467 mRNA sequence Length = 597 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 321 gtgatcttgacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaac 380 |||||||| || |||||||||||| |||| ||||||| |||||||||||||||||| Sbjct: 285 gtgatcttaacacacttgccgtggaaccatgtctcgcataggtcgcagcagatccagaag 226 Query: 381 tcgtc 385 ||||| Sbjct: 225 tcgtc 221
>gb|AY110398.1| Zea mays CL736_1 mRNA sequence Length = 1234 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 290 gtagtgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtacca 349 ||||||||||||||| || ||| ||| || ||||||||||| |||||||| ||| |||| Sbjct: 848 gtagtgcttgatgtgttcggccttggcaggagtgatcttgacacacttgccatggaacca 789 Query: 350 cttctcgcagttgtcgcagcagatccagaactcgtcct 387 ||||||| || ||||| ||||||||||| |||| Sbjct: 788 agtctcgcacgcatcacagcatatccagaactcatcct 751
>ref|NM_114147.3| Arabidopsis thaliana DNA binding / protein binding / zinc ion binding AT3G42790 mRNA, complete cds Length = 1072 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 321 gtgatcttgacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaa 379 |||||||| || |||||||| ||| |||||||||| || ||| |||||||||||||| Sbjct: 832 gtgatcttcacacacttgccatggaaccacttctcacaaaggtcacagcagatccagaa 774
>gb|BT013089.1| Lycopersicon esculentum clone 114355R, mRNA sequence Length = 1274 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 294 tgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtaccactt 352 |||||||| ||||| ||| ||| || |||||||| || |||||||||||| ||||||| Sbjct: 884 tgcttgatatgctcagccttggcaggggtgatcttcacacacttgccgtggaaccactt 826
>gb|AY114574.1| Arabidopsis thaliana nucleic acid binding protein-like (At3g42790) mRNA, complete cds Length = 865 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 321 gtgatcttgacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaa 379 |||||||| || |||||||| ||| |||||||||| || ||| |||||||||||||| Sbjct: 683 gtgatcttcacacacttgccatggaaccacttctcacaaaggtcacagcagatccagaa 625
>gb|DQ103593.1| Olimarabidopsis pumila clone BAC 44L14, complete sequence Length = 118342 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 321 gtgatcttgacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaa 379 |||||||| || |||||||| ||| |||| ||||| || |||||||||||||||||| Sbjct: 74555 gtgatcttcacacacttgccatggaaccatttctcacaaaggtcgcagcagatccagaa 74613
>gb|AY062851.1| Arabidopsis thaliana nucleic acid binding protein-like (T21C14.1) mRNA, complete cds Length = 1060 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 321 gtgatcttgacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaa 379 |||||||| || |||||||| ||| |||||||||| || ||| |||||||||||||| Sbjct: 822 gtgatcttcacacacttgccatggaaccacttctcacaaaggtcacagcagatccagaa 764
>emb|BX823497.1|CNS0A6J1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS44ZD11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 979 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 321 gtgatcttgacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaa 379 |||||||| || |||||||| ||| |||||||||| || ||| |||||||||||||| Sbjct: 763 gtgatcttcacacacttgccatggaaccacttctcacaaaggtcacagcagatccagaa 705
>emb|BX823251.1|CNS0A6HZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZE07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 305 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 321 gtgatcttgacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaa 379 |||||||| || |||||||| ||| |||||||||| || ||| |||||||||||||| Sbjct: 65 gtgatcttcacacacttgccatggaaccacttctcacaaaggtcacagcagatccagaa 7
>emb|AL138639.1|ATT21C14 Arabidopsis thaliana DNA chromosome 3, BAC clone T21C14 Length = 79677 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 321 gtgatcttgacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaa 379 |||||||| || |||||||| ||| |||||||||| || ||| |||||||||||||| Sbjct: 9675 gtgatcttcacacacttgccatggaaccacttctcacaaaggtcacagcagatccagaa 9733
>emb|BX251411.1| Tropheryma whipplei TW08/27, complete genome; segment 2/3 Length = 299050 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 tcaaggtttttcttaaaacat 109 ||||||||||||||||||||| Sbjct: 106486 tcaaggtttttcttaaaacat 106506
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 aaggaaactaagccatgaata 154 ||||||||||||||||||||| Sbjct: 4507356 aaggaaactaagccatgaata 4507336
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 299 gatgtgctccgcccgggcgggcgtg 323 |||||||||||||||||| |||||| Sbjct: 677725 gatgtgctccgcccgggccggcgtg 677749
>gb|AE014184.1| Tropheryma whipplei str. Twist, complete genome Length = 927303 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 tcaaggtttttcttaaaacat 109 ||||||||||||||||||||| Sbjct: 462845 tcaaggtttttcttaaaacat 462825
>gb|AC003027.1| Arabidopsis thaliana chromosome I BAC F21M11 genomic sequence, complete sequence Length = 119914 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 aaactaagccatgaataaatg 158 ||||||||||||||||||||| Sbjct: 83897 aaactaagccatgaataaatg 83877
>gb|AF252832.4| Homo sapiens chromosome 8 clone CTD-2017E4 map cen, complete sequence Length = 139288 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 71 aacacacacacgaaaatctcaaggtttt 98 |||||||||| ||||||||||| ||||| Sbjct: 7372 aacacacacaagaaaatctcaatgtttt 7345
>gb|AF161801.5| Homo sapiens chromosome 8 clone GS1-2g21 map p12, complete sequence Length = 138341 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 71 aacacacacacgaaaatctcaaggtttt 98 |||||||||| ||||||||||| ||||| Sbjct: 101984 aacacacacaagaaaatctcaatgtttt 101957
>gb|AC115039.7| Mus musculus chromosome 6, clone RP24-279C2, complete sequence Length = 195362 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 acagactaggaaggaaacta 143 |||||||||||||||||||| Sbjct: 23179 acagactaggaaggaaacta 23160
>gb|AC144805.9| Medicago truncatula clone mth2-72a11, complete sequence Length = 78128 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 gaaaatctcaaggtttttct 101 |||||||||||||||||||| Sbjct: 46577 gaaaatctcaaggtttttct 46596
>emb|AL713851.8| Human DNA sequence from clone RP11-526P5 on chromosome 10 Contains two novel genes and three CpG islands, complete sequence Length = 158779 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 agaagaaatggtcagttggc 22 |||||||||||||||||||| Sbjct: 100575 agaagaaatggtcagttggc 100594
>gb|BT009050.1| Triticum aestivum clone wdk9n1.pk001.m5:fis, full insert mRNA sequence Length = 1147 Score = 40.1 bits (20), Expect = 7.0 Identities = 50/60 (83%) Strand = Plus / Minus Query: 290 gtagtgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtacca 349 |||||||||||||||||| || ||| || |||||||| || ||||| |||||| |||| Sbjct: 824 gtagtgcttgatgtgctcagctttggcaggggtgatcttcacacacttaccgtggaacca 765
>emb|AJ306453.1|ETE306453 Eimeria tenella mRNA for microneme protein 4 (mic4 gene) Length = 7053 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 gatcttgacgcacttgccgt 342 |||||||||||||||||||| Sbjct: 1539 gatcttgacgcacttgccgt 1520
>gb|AC100818.2| Homo sapiens chromosome 8, clone RP11-473J6, complete sequence Length = 178856 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 71 aacacacacacgaaaatctcaaggtttt 98 |||||||||| ||||||||||| ||||| Sbjct: 35668 aacacacacaagaaaatctcaatgtttt 35695
>gb|AC108157.3| Homo sapiens BAC clone RP11-580P21 from 4, complete sequence Length = 167001 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gaagaagaaatggtcagttg 20 |||||||||||||||||||| Sbjct: 158868 gaagaagaaatggtcagttg 158887
>gb|AC124265.7| Homo sapiens chromosome 8, clone CTD-2017E4, complete sequence Length = 139288 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 71 aacacacacacgaaaatctcaaggtttt 98 |||||||||| ||||||||||| ||||| Sbjct: 7371 aacacacacaagaaaatctcaatgtttt 7344
>dbj|AP002520.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-705O3, complete sequence Length = 66000 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 ttttcttaaaacatgatgaa 115 |||||||||||||||||||| Sbjct: 5746 ttttcttaaaacatgatgaa 5765
>gb|U51243.1|HSU51243 Human alpha-albumin gene, complete cds Length = 24454 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gaagaagaaatggtcagttg 20 |||||||||||||||||||| Sbjct: 12160 gaagaagaaatggtcagttg 12179
>emb|AL929395.8| Mouse DNA sequence from clone RP23-263P13 on chromosome 2, complete sequence Length = 121993 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 acacacacacgaaaatctca 91 |||||||||||||||||||| Sbjct: 53405 acacacacacgaaaatctca 53386
>gb|AC145933.3| Gallus gallus BAC clone CH261-41E11 from chromosome unknown, complete sequence Length = 209915 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 ctaggaaggaaactaagccatgaa 152 ||||||||||||| |||||||||| Sbjct: 102984 ctaggaaggaaacaaagccatgaa 103007
>emb|CT571263.1| Medicago truncatula chromosome 5 clone mte1-7c20, COMPLETE SEQUENCE Length = 127003 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 gaaaatctcaaggtttttcttaaa 105 |||||| ||||||||||||||||| Sbjct: 88646 gaaaatgtcaaggtttttcttaaa 88623
>gb|AC132365.4| Mus musculus BAC clone RP23-459M5 from 6, complete sequence Length = 162524 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 acagactaggaaggaaacta 143 |||||||||||||||||||| Sbjct: 24811 acagactaggaaggaaacta 24830
>gb|M57905.1|CHKCTNT Gallus domesticus cardiac isoform of troponin T (cTNT) gene, exon 1 and promoter sequence Length = 319 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 tccccccggcgcccaccccg 231 |||||||||||||||||||| Sbjct: 243 tccccccggcgcccaccccg 224
>dbj|AP000083.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region, section 19/19 Length = 102456 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 71 aacacacacacgaaaatctcaaggtttt 98 |||||||||| ||||||||||| ||||| Sbjct: 79100 aacacacacaagaaaatctcaatgtttt 79127 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,105,694 Number of Sequences: 3902068 Number of extensions: 4105694 Number of successful extensions: 71177 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 83 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 70809 Number of HSP's gapped (non-prelim): 353 length of query: 517 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 494 effective length of database: 17,143,297,704 effective search space: 8468789065776 effective search space used: 8468789065776 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)