ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart28b11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PER9_ARATH (Q96512) Peroxidase 9 precursor (EC 1.11.1.7) (Atpero... 33 0.35
2PER36_ARATH (Q9SD46) Peroxidase 36 precursor (EC 1.11.1.7) (Atpe... 32 0.79
3PER66_ARATH (Q9LT91) Peroxidase 66 precursor (EC 1.11.1.7) (Atpe... 32 0.79
4PER3_ARMRU (P17180) Peroxidase C3 precursor (EC 1.11.1.7) 30 3.0
5PERE5_ARMRU (P59121) Peroxidase E5 (EC 1.11.1.7) 30 3.9
6PER23_ARATH (O80912) Peroxidase 23 precursor (EC 1.11.1.7) (Atpe... 30 3.9
7PER72_ARATH (Q9FJZ9) Peroxidase 72 precursor (EC 1.11.1.7) (Atpe... 30 5.1
8PER52_ARATH (Q9FLC0) Peroxidase 52 precursor (EC 1.11.1.7) (Atpe... 30 5.1
9RL15_MYCH2 (Q601J6) 50S ribosomal protein L15 29 8.7

>PER9_ARATH (Q96512) Peroxidase 9 precursor (EC 1.11.1.7) (Atperox P9) (ATP18a)|
          Length = 346

 Score = 33.5 bits (75), Expect = 0.35
 Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = -2

Query: 509 GRTDWAVKGLAENKWWFYGQFRDSMVKLSQYQP-GGNVGEIRRNSCFAPN 363
           G+T   VK  AE++  F+ QF  SMV +   QP  G  GEIR+ SC   N
Sbjct: 298 GKTGALVKAYAEDERLFFQQFAKSMVNMGNIQPLTGFNGEIRK-SCHVIN 346



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>PER36_ARATH (Q9SD46) Peroxidase 36 precursor (EC 1.11.1.7) (Atperox P36)|
          Length = 336

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -2

Query: 491 VKGLAENKWWFYGQFRDSMVKLSQYQP-GGNVGEIRR 384
           VK  AEN+  F+ QF  SMVK+    P  G  GEIRR
Sbjct: 291 VKYYAENEGAFFEQFAKSMVKMGNISPLTGTDGEIRR 327



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>PER66_ARATH (Q9LT91) Peroxidase 66 precursor (EC 1.11.1.7) (Atperox P66)|
           (ATP27a)
          Length = 322

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = -2

Query: 512 DGRTDWAVKGLAENKWWFYGQFRDSMVKLSQYQPGGNVGEIRRNSCF 372
           D RT W V+  A+++  F+ +F  SMVKL  +      G++R N+ F
Sbjct: 275 DSRTKWIVETFAQDQKAFFREFAASMVKLGNFGV-KETGQVRVNTRF 320



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>PER3_ARMRU (P17180) Peroxidase C3 precursor (EC 1.11.1.7)|
          Length = 349

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -2

Query: 479 AENKWWFYGQFRDSMVKLSQYQP-GGNVGEIRRNSCFAPNGR 357
           + N + F+G F D+M+++   +P  G  GEIR+N C   N R
Sbjct: 295 SSNTFAFFGAFVDAMIRMGNLRPLTGTQGEIRQN-CRVVNSR 335



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>PERE5_ARMRU (P59121) Peroxidase E5 (EC 1.11.1.7)|
          Length = 306

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -2

Query: 479 AENKWWFYGQFRDSMVKLSQYQP-GGNVGEIRRNSCFAPNGR 357
           + N   F+G F D+M+++   +P  G  GEIR+N C   N R
Sbjct: 266 SSNTLSFFGAFADAMIRMGNLRPLTGTQGEIRQN-CRVVNSR 306



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>PER23_ARATH (O80912) Peroxidase 23 precursor (EC 1.11.1.7) (Atperox P23)|
           (ATP34)
          Length = 349

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -2

Query: 491 VKGLAENKWWFYGQFRDSMVKLSQYQP-GGNVGEIRRNSCFAPNGR 357
           V   + N + F+G F D+M+++   +P  G  GEIR+N C   N R
Sbjct: 291 VNQYSSNTFVFFGAFVDAMIRMGNLKPLTGTQGEIRQN-CRVVNPR 335



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>PER72_ARATH (Q9FJZ9) Peroxidase 72 precursor (EC 1.11.1.7) (Atperox P72)|
           (PRXR8) (ATP6a)
          Length = 336

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -2

Query: 479 AENKWWFYGQFRDSMVKLSQYQP-GGNVGEIRR 384
           AEN+  F+ QF  SMVK+    P  G  GEIRR
Sbjct: 295 AENQEAFFEQFAKSMVKMGNISPLTGAKGEIRR 327



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>PER52_ARATH (Q9FLC0) Peroxidase 52 precursor (EC 1.11.1.7) (Atperox P52)|
           (ATP49)
          Length = 324

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -2

Query: 509 GRTDWAVKGLAENKWWFYGQFRDSMVKLSQYQP-GGNVGEIRR 384
           G TD  V+G + N   F   F  +M+K+    P  G+ GEIR+
Sbjct: 276 GSTDSIVRGYSNNPSSFNSDFTAAMIKMGDISPLTGSSGEIRK 318



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>RL15_MYCH2 (Q601J6) 50S ribosomal protein L15|
          Length = 147

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = +1

Query: 31  PYFKRVPRHHERGLNEAEYTLLTLT---TRKQNDDLV 132
           P+F+RVP+   R  N+ EY +  L+   +R Q+ D V
Sbjct: 56  PWFRRVPKRGFRNFNKKEYEIFNLSDLESRYQDGDTV 92


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,631,302
Number of Sequences: 219361
Number of extensions: 1603260
Number of successful extensions: 3883
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3881
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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