>CTNS_ARATH (P57758) Cystinosin homolog|
          Length = 270

 Score =  158 bits (400), Expect = 9e-39
 Identities = 78/119 (65%), Positives = 91/119 (76%)
 Frame = -1

Query: 551 WLWLIDVFNSIQVGMTTVKYIPQAVMNFKRKSTVGWSIGNILLDLTGGVLNFGQMGVQAI 372
           WLWLI +FNSIQV MT VKYIPQA MNF RKSTVGWSIGNILLD TGG+ N+ QM +Q+I
Sbjct: 148 WLWLISIFNSIQVFMTCVKYIPQAKMNFTRKSTVGWSIGNILLDFTGGLANYLQMVIQSI 207

Query: 371 DQHTLVNFYGNIGKTLLSLETVFFDLLFIIQHYVLYPVKRDENGKAIISERIAPLIRPS 195
           DQ++  NFYGN+GKTLLSL ++FFD+LF+ QHYVLYP K+         E   PLI  S
Sbjct: 208 DQNSWKNFYGNMGKTLLSLISIFFDILFMFQHYVLYPEKKVSKSPETGEESNEPLIDSS 266

>CTNS_CAEEL (Q09500) Cystinosin homolog|
          Length = 404

 Score = 98.6 bits (244), Expect = 1e-20
 Identities = 48/100 (48%), Positives = 66/100 (66%)
 Frame = -1

Query: 560 KSDWLWLIDVFNSIQVGMTTVKYIPQAVMNFKRKSTVGWSIGNILLDLTGGVLNFGQMGV 381
           K   L  +   + I++ +T  KY PQA  N+ RKSTVGWSIGNI+LD TGG L+  QM +
Sbjct: 261 KIQLLSFVTSLSYIKMAVTCCKYFPQAYFNYTRKSTVGWSIGNIMLDFTGGTLDILQMIL 320

Query: 380 QAIDQHTLVNFYGNIGKTLLSLETVFFDLLFIIQHYVLYP 261
           QA++ +    FY N  K  L   ++FFD++F++QHYVLYP
Sbjct: 321 QAVNVNDWSAFYANPVKFGLGFVSIFFDIIFMVQHYVLYP 360



 Score = 31.2 bits (69), Expect = 2.1
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -1

Query: 503 TVKYIPQAVMNFKRKSTVGWSIGNILLDLTG 411
           ++ + PQ  +NFKRKS VG +   + L+L G
Sbjct: 141 SISFYPQMYLNFKRKSVVGLNFDFLSLNLVG 171

>CTNS_DROME (Q9VCR7) Cystinosin homolog|
          Length = 397

 Score = 94.7 bits (234), Expect = 2e-19
 Identities = 46/103 (44%), Positives = 69/103 (66%)
 Frame = -1

Query: 551 WLWLIDVFNSIQVGMTTVKYIPQAVMNFKRKSTVGWSIGNILLDLTGGVLNFGQMGVQAI 372
           WL  +   + +++ +T +KY+PQA+MN++RKST GWSIGNILLD TGG L+  QM + A 
Sbjct: 267 WLDFLYYCSYVKLTITIIKYVPQALMNYRRKSTSGWSIGNILLDFTGGTLSMLQMILNAH 326

Query: 371 DQHTLVNFYGNIGKTLLSLETVFFDLLFIIQHYVLYPVKRDEN 243
           +    V+ +G+  K  L L +V FD+ F++QHYV Y   R+ +
Sbjct: 327 NYDDWVSIFGDPTKFGLGLFSVLFDVFFMLQHYVFYRHSRESS 369

>CTNS_MOUSE (P57757) Cystinosin|
          Length = 367

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 48/101 (47%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
 Frame = -1

Query: 551 WLWLIDVFNSIQVGMTTVKYIPQAVMNFKRKSTVGWSIGNILLDLTGGVLNFGQMGVQAI 372
           WL  +  F+ I++ +T +KY PQA MNF  KST GWSIG +LLD TGG  +  QM +Q+ 
Sbjct: 262 WLQFLFCFSYIKLIITLIKYFPQAYMNFYYKSTKGWSIGGVLLDFTGGSFSLLQMFLQSY 321

Query: 371 --DQHTLVNFYGNIGKTLLSLETVFFDLLFIIQHYVLYPVK 255
             DQ TL+  +G+  K  L + T+FFD++F IQH+ LY  K
Sbjct: 322 NNDQWTLI--FGDPTKFGLGVFTIFFDVVFFIQHFYLYRKK 360



 Score = 40.4 bits (93), Expect = 0.003
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
 Frame = -1

Query: 503 TVKYIPQAVMNFKRKSTVGWSIGNILLDLTG----GVLNFGQMGVQAIDQHTLVNFYGNI 336
           +V + PQ + N++RKS +G S   + L+LTG     V N G + V  I +  L+ +   +
Sbjct: 139 SVSFYPQVIQNWRRKSVIGLSFDFLALNLTGFVAYSVFNIGLLWVPYIQEEFLLKYPNGV 198

Query: 335 -----GKTLLSLETVFFDLLFIIQ 279
                     SL  V   L+ I+Q
Sbjct: 199 NPVDSNDAFFSLHAVALTLIVILQ 222

>CTNS_HUMAN (O60931) Cystinosin|
          Length = 367

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
 Frame = -1

Query: 551 WLWLIDVFNSIQVGMTTVKYIPQAVMNFKRKSTVGWSIGNILLDLTGGVLNFGQMGVQAI 372
           WL  +  F+ I++ +T VKY PQA MNF  KST GWSIGN+LLD TGG  +  QM +Q+ 
Sbjct: 262 WLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGWSIGNVLLDFTGGSFSLLQMFLQSY 321

Query: 371 --DQHTLVNFYGNIGKTLLSLETVFFDLLFIIQHYVLY 264
             DQ TL+  +G+  K  L + ++ FD++F IQH+ LY
Sbjct: 322 NNDQWTLI--FGDPTKFGLGVFSIVFDVVFFIQHFCLY 357



 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
 Frame = -1

Query: 503 TVKYIPQAVMNFKRKSTVGWSIGNILLDLTG----GVLNFGQMGVQAIDQHTLVNFYG-- 342
           ++ + PQ +MN++RKS +G S   + L+LTG     V N G + V  I +  L+ +    
Sbjct: 139 SISFYPQVIMNWRRKSVIGLSFDFVALNLTGFVAYSVFNIGLLWVPYIKEQFLLKYPNGV 198

Query: 341 ---NIGKTLLSLETVFFDLLFIIQ 279
              N      SL  V   L+ I+Q
Sbjct: 199 NPVNSNDVFFSLHAVVLTLIIIVQ 222

>ERS1_YEAST (P17261) Transmembrane protein ERS1 (ERD suppressor)|
          Length = 260

 Score = 56.2 bits (134), Expect = 6e-08
 Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
 Frame = -1

Query: 521 IQVGMTTVKYIPQAVMNFKRKSTVGWSIGNILLDLTGGVLNFGQMGVQAIDQH--TLVNF 348
           +++ M+ +KYIPQ   N  RKS   + I  + LD+TGG+ +  Q+  Q  +    +L  F
Sbjct: 161 LKISMSLIKYIPQVTHNSTRKSMDCFPIQGVFLDVTGGIASLLQLIWQLSNDQGFSLDTF 220

Query: 347 YGNIGKTLLSLETVFFDLLFIIQHYV 270
             N GK  LS+ T+ F+ +FI+Q +V
Sbjct: 221 VTNFGKVGLSMVTLIFNFIFIMQWFV 246

>YO092_YEAST (Q12010) Uncharacterized protein YOL092W|
          Length = 308

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 24/92 (26%), Positives = 40/92 (43%)
 Frame = -1

Query: 545 WLIDVFNSIQVGMTTVKYIPQAVMNFKRKSTVGWSIGNILLDLTGGVLNFGQMGVQAIDQ 366
           W+  +F  +   +     IPQ ++NFKRKS  G S    L    G       + V ++D 
Sbjct: 210 WMAQIFGYLSALLYLGSRIPQILLNFKRKSCEGISFLFFLFACLGNTTFIFSVIVISLDW 269

Query: 365 HTLVNFYGNIGKTLLSLETVFFDLLFIIQHYV 270
             L+    N    + S+ T+F D +   Q ++
Sbjct: 270 KYLIM---NASWLVGSIGTLFMDFVIFSQFFI 298



 Score = 34.3 bits (77), Expect = 0.25
 Identities = 23/62 (37%), Positives = 33/62 (53%)
 Frame = -1

Query: 542 LIDVFNSIQVGMTTVKYIPQAVMNFKRKSTVGWSIGNILLDLTGGVLNFGQMGVQAIDQH 363
           L  +  SI +    + ++PQ   NF RKS+ G S+  ++L L G V N   MG  A+ QH
Sbjct: 13  LSGISGSISISCWIIVFVPQIYENFYRKSSDGLSLLFVVLWLAGDVFNL--MG--AVMQH 68

Query: 362 TL 357
            L
Sbjct: 69  LL 70

>YBZ7_YEAST (P38279) Hypothetical 33.5 kDa protein in MRPS9-YSW1 intergenic|
           region
          Length = 296

 Score = 34.3 bits (77), Expect = 0.25
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = -1

Query: 524 SIQVGMTTVKYIPQAVMNFKRKSTVGWSIGNILLDLTGGVLN-FGQMGVQAIDQHTLVNF 348
           SI +    V ++PQ   NF+R+S  G S+  I+L L G + N  G M    +    ++  
Sbjct: 19  SISICCWIVVFVPQIYENFRRQSAEGLSLLFIVLWLLGDIFNVMGAMMQNLLPTMIILAA 78

Query: 347 YGNIGKTLLSLETVFFD 297
           Y  +   +L ++ +++D
Sbjct: 79  YYTLADLILLIQCMWYD 95

>BAG_STRAG (P27951) IgA FC receptor precursor (Beta antigen) (B antigen)|
          Length = 1164

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
 Frame = +3

Query: 222 LRNDGLT------ILIPFDRVQHIVLNYEEKVE--------ENS-FQRKKSLADISIEIH 356
           L ND L        L PF++++ IV + ++KVE        ENS   + K  A I++  +
Sbjct: 694 LENDALKGYFEKYFLTPFNKIKQIVDDLDKKVEQDQPAPIPENSEMDQAKEKAKIAVSKY 753

Query: 357 *SVLINSLHTHLTK 398
            S +++ +H HL K
Sbjct: 754 MSKVLDGVHQHLQK 767

>DPOL_METJA (Q58295) DNA polymerase (EC 2.7.7.7) [Contains: Mja pol-1 intein; Mja|
            pol-2 intein]
          Length = 1634

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 20/73 (27%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
 Frame = +3

Query: 177  IFFRLI*GPDQRSYPLRNDG--LTILIPFDRVQHIVLNYEEKVEENSFQRKKSLADISIE 350
            I F L+ G   R  P++N G  LT+   +  V+ ++L+  +++E  +F+    + D+S+E
Sbjct: 1288 ILFNLV-GIPTRFTPVKNKGYKLTLNPKYGTVKDLMLDEVKEIE--AFEYSGYVYDLSVE 1344

Query: 351  IH*SVLINSLHTH 389
             + + L+N+++ H
Sbjct: 1345 DNENFLVNNIYAH 1357

>ETV6_MOUSE (P97360) Transcription factor ETV6 (ETS-related protein Tel1) (Tel)|
           (ETS translocation variant 6)
          Length = 485

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -1

Query: 458 STVGWSIGNILLDLTGGVLNFGQMGVQAIDQHT 360
           S VGW  GN+     GGV+  G++GV A+ + T
Sbjct: 452 SPVGWPRGNLPTGTAGGVMEAGELGV-AVKEET 483

>HAK13_ORYSA (Q652J4) Probable potassium transporter 13 (OsHAK13)|
          Length = 778

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
 Frame = -1

Query: 539 IDVFNSIQVGMTTVKYI-PQAVMNFKRKSTV-GWS-IGNILLDLTGGVLNFGQMG 384
           I ++N I+   + ++ + P  + NF RK+   GWS +G I+L LTG    F  +G
Sbjct: 241 IGIYNIIKWNPSVIRALSPYYIYNFFRKAGKDGWSSLGGIVLCLTGAEAMFADLG 295

>TRAF2_MOUSE (P39429) TNF receptor-associated factor 2|
          Length = 501

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
 Frame = +3

Query: 111 CIFVQTNSN*DSTARTVYISYTIFFRLI*GPDQR--SYPLRNDGLTILIPFDRVQHIVLN 284
           C+ V  N   D T R  ++S  +FF ++ GP+     +P       +L+  +  +H++  
Sbjct: 391 CLRVYLNG--DGTGRGTHLS--LFFVVMKGPNDALLQWPFNQKVTLMLLDHNNREHVIDA 446

Query: 285 YEEKVEENSFQRKKSLADIS 344
           +   V  +SFQR  S  +I+
Sbjct: 447 FRPDVTSSSFQRPVSDMNIA 466

>L2GL_DROPS (Q08470) Protein lethal(2) giant larvae (P127)|
          Length = 1166

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -1

Query: 416 TGGVLNFGQMGVQAIDQHTLVN 351
           TG +  FGQ GV+   QHTLVN
Sbjct: 56  TGAIKVFGQPGVELYAQHTLVN 77


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,001,646
Number of Sequences: 219361
Number of extensions: 1561538
Number of successful extensions: 3769
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3767
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)