>gb|AF479051.1| Triticum aestivum early nodule-specific-like protein ENOD8 gene
           mRNA, partial cds
          Length = 501

 Score =  228 bits (115), Expect = 1e-56
 Identities = 174/193 (90%), Gaps = 1/193 (0%)
 Strand = Plus / Minus

                                                                       
Query: 302 acgtcatgctaggccgctagcttgctctttcgtctggagctcgtggg-acgaagcgccac 360
           |||||||| ||||| |||||||||| ||||||||| ||||| | ||| ||||||||||||
Sbjct: 491 acgtcatgntaggctgctagcttgccctttcgtctcgagcttgaggggacgaagcgccac 432

                                                                       
Query: 361 agatcgactgcgatgtcaagctccttctgtttgtggaacctgtaggtccgtggtagatcg 420
           ||||||||| |||| || |||||||| || |||||||||||||||||||| |||||||||
Sbjct: 431 agatcgactncgatatcgagctccttttgcttgtggaacctgtaggtccgaggtagatcg 372

                                                                       
Query: 421 tagcgaagctcacacagaacttcagcactgattgcgttgcagttacgcaaggctgacttc 480
           ||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||| ||||
Sbjct: 371 tagcgcagctcacacagaacttcggcactgattgcgttgcaattacgcagggctgccttc 312

                        
Query: 481 ttgatgtattctc 493
           |||||||| ||||
Sbjct: 311 ttgatgtactctc 299

>ref|XM_550346.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 976

 Score =  111 bits (56), Expect = 2e-21
 Identities = 137/164 (83%)
 Strand = Plus / Minus

                                                                       
Query: 330 ttcgtctggagctcgtgggacgaagcgccacagatcgactgcgatgtcaagctccttctg 389
           ||||||| | |||||||| ||||| ||||| | |||||| ||||| |||| ||| || ||
Sbjct: 705 ttcgtctcgggctcgtggcacgaaccgccaaaaatcgacggcgatatcaacctcgttttg 646

                                                                       
Query: 390 tttgtggaacctgtaggtccgtggtagatcgtagcgaagctcacacagaacttcagcact 449
           |||||| ||| |||| ||||||||||| | |||||| |||||||| ||||| || |||||
Sbjct: 645 tttgtgaaacttgtatgtccgtggtaggttgtagcggagctcacatagaacctcggcact 586

                                                       
Query: 450 gattgcgttgcagttacgcaaggctgacttcttgatgtattctc 493
            || || |||||||| |||||||||  ||||||||||| |||||
Sbjct: 585 tatggcattgcagttgcgcaaggctaccttcttgatgtgttctc 542

>dbj|AK066755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075C21, full
           insert sequence
          Length = 976

 Score =  111 bits (56), Expect = 2e-21
 Identities = 137/164 (83%)
 Strand = Plus / Minus

                                                                       
Query: 330 ttcgtctggagctcgtgggacgaagcgccacagatcgactgcgatgtcaagctccttctg 389
           ||||||| | |||||||| ||||| ||||| | |||||| ||||| |||| ||| || ||
Sbjct: 704 ttcgtctcgggctcgtggcacgaaccgccaaaaatcgacggcgatatcaacctcgttttg 645

                                                                       
Query: 390 tttgtggaacctgtaggtccgtggtagatcgtagcgaagctcacacagaacttcagcact 449
           |||||| ||| |||| ||||||||||| | |||||| |||||||| ||||| || |||||
Sbjct: 644 tttgtgaaacttgtatgtccgtggtaggttgtagcggagctcacatagaacctcggcact 585

                                                       
Query: 450 gattgcgttgcagttacgcaaggctgacttcttgatgtattctc 493
            || || |||||||| |||||||||  ||||||||||| |||||
Sbjct: 584 tatggcattgcagttgcgcaaggctaccttcttgatgtgttctc 541

>gb|AY106391.1| Zea mays PCO123453 mRNA sequence
          Length = 1005

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 111/134 (82%)
 Strand = Plus / Minus

                                                                       
Query: 352 aagcgccacagatcgactgcgatgtcaagctccttctgtttgtggaacctgtaggtccgt 411
           |||||||||||||||||||| ||||||| ||| || |  ||||| ||| |||| ||||| 
Sbjct: 776 aagcgccacagatcgactgcaatgtcaatctcttttttcttgtgcaacttgtacgtccgc 717

                                                                       
Query: 412 ggtagatcgtagcgaagctcacacagaacttcagcactgattgcgttgcagttacgcaag 471
           ||||||| ||| || ||||| || ||||| || |||||||| || ||| ||  |||||||
Sbjct: 716 ggtagattgtaacgcagctcgcatagaacctccgcactgatggcattgaagccacgcaag 657

                         
Query: 472 gctgacttcttgat 485
           |||| |||||||||
Sbjct: 656 gctgccttcttgat 643

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                           
Query: 330     ttcgtctggagctcgtgggacgaagcgccacagatcgactgcgatgtcaagctccttctg 389
               ||||||| | |||||||| ||||| ||||| | |||||| ||||| |||| ||| || ||
Sbjct: 3153537 ttcgtctcgggctcgtggcacgaaccgccaaaaatcgacggcgatatcaacctcgttttg 3153596

                                                        
Query: 390     tttgtggaacctgtaggtccgtggtagatcgtagcgaagct 430
               |||||| ||| |||| ||||||||||| | |||||| ||||
Sbjct: 3153597 tttgtgaaacttgtatgtccgtggtaggttgtagcggagct 3153637



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                          
Query: 429     ctcacacagaacttcagcactgattgcgttgcagttacgcaaggctgacttcttgatgt 487
               |||||| ||||| || ||||| || || |||||||| |||||||||  |||||||||||
Sbjct: 3154108 ctcacatagaacctcggcacttatggcattgcagttgcgcaaggctaccttcttgatgt 3154166



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 271      cgcgatgtcataatctcgtt 290
                ||||||||||||||||||||
Sbjct: 24006820 cgcgatgtcataatctcgtt 24006839

>dbj|AB026295.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              clone:P0681F10
          Length = 170371

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                          
Query: 330    ttcgtctggagctcgtgggacgaagcgccacagatcgactgcgatgtcaagctccttctg 389
              ||||||| | |||||||| ||||| ||||| | |||||| ||||| |||| ||| || ||
Sbjct: 107722 ttcgtctcgggctcgtggcacgaaccgccaaaaatcgacggcgatatcaacctcgttttg 107781

                                                       
Query: 390    tttgtggaacctgtaggtccgtggtagatcgtagcgaagct 430
              |||||| ||| |||| ||||||||||| | |||||| ||||
Sbjct: 107782 tttgtgaaacttgtatgtccgtggtaggttgtagcggagct 107822



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                         
Query: 429    ctcacacagaacttcagcactgattgcgttgcagttacgcaaggctgacttcttgatgt 487
              |||||| ||||| || ||||| || || |||||||| |||||||||  |||||||||||
Sbjct: 108293 ctcacatagaacctcggcacttatggcattgcagttgcgcaaggctaccttcttgatgt 108351

>ref|XM_872927.1| PREDICTED: Bos taurus similar to Signal transducer and activator of
           transcription 1-alpha/beta (Transcription factor ISGF-3
           components p91/p84), transcript variant 11 (LOC510814),
           mRNA
          Length = 5070

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 374 tgtcaagctccttctgtttgt 394
           |||||||||||||||||||||
Sbjct: 707 tgtcaagctccttctgtttgt 687

>ref|XM_872826.1| PREDICTED: Bos taurus similar to Signal transducer and activator of
           transcription 1-alpha/beta (Transcription factor ISGF-3
           components p91/p84), transcript variant 10 (LOC510814),
           mRNA
          Length = 5079

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 374 tgtcaagctccttctgtttgt 394
           |||||||||||||||||||||
Sbjct: 707 tgtcaagctccttctgtttgt 687

>ref|XM_872736.1| PREDICTED: Bos taurus similar to Signal transducer and activator of
           transcription 1-alpha/beta (Transcription factor ISGF-3
           components p91/p84), transcript variant 9 (LOC510814),
           mRNA
          Length = 4917

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 374 tgtcaagctccttctgtttgt 394
           |||||||||||||||||||||
Sbjct: 707 tgtcaagctccttctgtttgt 687

>ref|XM_872625.1| PREDICTED: Bos taurus similar to Signal transducer and activator of
           transcription 1-alpha/beta (Transcription factor ISGF-3
           components p91/p84), transcript variant 8 (LOC510814),
           mRNA
          Length = 5238

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 374 tgtcaagctccttctgtttgt 394
           |||||||||||||||||||||
Sbjct: 701 tgtcaagctccttctgtttgt 681

>ref|XM_872526.1| PREDICTED: Bos taurus similar to Signal transducer and activator of
           transcription 1-alpha/beta (Transcription factor ISGF-3
           components p91/p84), transcript variant 7 (LOC510814),
           mRNA
          Length = 5040

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 374 tgtcaagctccttctgtttgt 394
           |||||||||||||||||||||
Sbjct: 707 tgtcaagctccttctgtttgt 687

>ref|XM_588019.2| PREDICTED: Bos taurus similar to Signal transducer and activator of
           transcription 1-alpha/beta (Transcription factor ISGF-3
           components p91/p84), transcript variant 1 (LOC510814),
           mRNA
          Length = 2708

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 374 tgtcaagctccttctgtttgt 394
           |||||||||||||||||||||
Sbjct: 707 tgtcaagctccttctgtttgt 687

>ref|XM_872328.1| PREDICTED: Bos taurus similar to Signal transducer and activator of
           transcription 1-alpha/beta (Transcription factor ISGF-3
           components p91/p84), transcript variant 6 (LOC510814),
           mRNA
          Length = 5061

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 374 tgtcaagctccttctgtttgt 394
           |||||||||||||||||||||
Sbjct: 707 tgtcaagctccttctgtttgt 687

>ref|XM_872114.1| PREDICTED: Bos taurus similar to Signal transducer and activator of
           transcription 1-alpha/beta (Transcription factor ISGF-3
           components p91/p84), transcript variant 4 (LOC510814),
           mRNA
          Length = 5147

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 374 tgtcaagctccttctgtttgt 394
           |||||||||||||||||||||
Sbjct: 707 tgtcaagctccttctgtttgt 687

>ref|XM_864032.1| PREDICTED: Bos taurus similar to Signal transducer and activator of
           transcription 1-alpha/beta (Transcription factor ISGF-3
           components p91/p84), transcript variant 3 (LOC510814),
           mRNA
          Length = 5073

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 374 tgtcaagctccttctgtttgt 394
           |||||||||||||||||||||
Sbjct: 707 tgtcaagctccttctgtttgt 687

>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 384     cttctgtttgtggaacctgtaggt 407
               ||||||||||||||||||| ||||
Sbjct: 4090172 cttctgtttgtggaacctgaaggt 4090149

>gb|AC136223.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0093E24,
              complete sequence
          Length = 146492

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    cgcgatgtcataatctcgtt 290
              ||||||||||||||||||||
Sbjct: 124802 cgcgatgtcataatctcgtt 124783

>gb|AY323788.1| Hyla cinerea SIH-06 Rag-2 gene, partial cds
          Length = 816

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 221 tcttctcctggcaagtccagccat 244
           ||||||||||| ||||||||||||
Sbjct: 585 tcttctcctgggaagtccagccat 608

>gb|AC012560.5| Homo sapiens chromosome 10 clone RP11-397I15, complete sequence
          Length = 170917

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 379   agctccttctgtttgtggaacctg 402
             ||||||||||||||||||| ||||
Sbjct: 79973 agctccttctgtttgtggagcctg 79996

>gb|AY172024.1| Crassostrea ariakensis heat shock protein 70 mRNA, complete cds
          Length = 2320

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 376  tcaagctccttctgtttgtg 395
            ||||||||||||||||||||
Sbjct: 1897 tcaagctccttctgtttgtg 1878

>gb|AC011061.13| Homo sapiens chromosome 17, clone RP11-12H18, complete sequence
          Length = 165643

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     gagagaacgccagccaaccc 106
              ||||||||||||||||||||
Sbjct: 153540 gagagaacgccagccaaccc 153559

>gb|AC025518.8| Homo sapiens chromosome 17, clone RP11-713H12, complete sequence
          Length = 176355

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    gagagaacgccagccaaccc 106
             ||||||||||||||||||||
Sbjct: 25564 gagagaacgccagccaaccc 25583

>gb|AC012084.9| Homo sapiens 10 BAC RP11-943E22 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 167441

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 379  agctccttctgtttgtggaacctg 402
            ||||||||||||||||||| ||||
Sbjct: 8495 agctccttctgtttgtggagcctg 8472

>gb|AY064167.1| Lactobacillus helveticus N-deoxyribosyltransferase (ntd) gene,
           complete cds
          Length = 1286

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 211 gccgacgtcttcttctcctggcaa 234
           |||||||||||||||| |||||||
Sbjct: 493 gccgacgtcttcttcttctggcaa 470

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 271     cgcgatgtcataatctcgtt 290
               ||||||||||||||||||||
Sbjct: 8202569 cgcgatgtcataatctcgtt 8202550

>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 384     cttctgtttgtggaacctgtaggt 407
               ||||||||||||||||||| ||||
Sbjct: 3683047 cttctgtttgtggaacctgaaggt 3683070

>dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0490F09
          Length = 149542

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    cgcgatgtcataatctcgtt 290
              ||||||||||||||||||||
Sbjct: 136431 cgcgatgtcataatctcgtt 136450

>dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0429G06
          Length = 158321

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   cgcgatgtcataatctcgtt 290
             ||||||||||||||||||||
Sbjct: 16513 cgcgatgtcataatctcgtt 16532

>gb|U51038.1|HSU51038 Human nonmuscle myosin II heavy chain-B gene, partial cds
          Length = 3603

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  gagagaacgccagccaaccc 106
           ||||||||||||||||||||
Sbjct: 858 gagagaacgccagccaaccc 877

>emb|AL732296.11| Mouse DNA sequence from clone RP23-131P6 on chromosome 2, complete
             sequence
          Length = 203503

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    atccagcatgacaaaaacaa 57
             ||||||||||||||||||||
Sbjct: 45736 atccagcatgacaaaaacaa 45717


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,663,956
Number of Sequences: 3902068
Number of extensions: 3663956
Number of successful extensions: 65791
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65649
Number of HSP's gapped (non-prelim): 141
length of query: 493
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 471
effective length of database: 17,147,199,772
effective search space: 8076331092612
effective search space used: 8076331092612
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)