Clone Name | rbart28b04 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 147 bits (74), Expect = 4e-32 Identities = 116/130 (89%) Strand = Plus / Plus Query: 390 cagtgatcataggtacagttggatgagctcatcgctcacaacggatggtgtcagaacacc 449 ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 18920505 cagtgatcataggtatagttggataagctcatcgctcacaacagatggtgtcagaacacc 18920564 Query: 450 aaggtcagtcaaaagaagtgtgaggtactggggaggagtgtagtctcttgccgatgtctc 509 || ||||||| ||| || || || ||||||||||||||||||||||| || || ||||| Sbjct: 18920565 gagatcagtcagaagcagcgtaagatactggggaggagtgtagtctctcgctgaagtctc 18920624 Query: 510 aacttccaca 519 ||| |||||| Sbjct: 18920625 aacctccaca 18920634 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 134 atatttaggaacggaggaagtacgta 159 ||||||||| |||||||||||||||| Sbjct: 10796294 atatttagggacggaggaagtacgta 10796269 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 5 ctaatccctccattcctaaatataag 30 ||||||||||||||| |||||||||| Sbjct: 5679867 ctaatccctccattcataaatataag 5679842
>dbj|AK071243.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087F24, full insert sequence Length = 1121 Score = 147 bits (74), Expect = 4e-32 Identities = 116/130 (89%) Strand = Plus / Minus Query: 390 cagtgatcataggtacagttggatgagctcatcgctcacaacggatggtgtcagaacacc 449 ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 907 cagtgatcataggtatagttggataagctcatcgctcacaacagatggtgtcagaacacc 848 Query: 450 aaggtcagtcaaaagaagtgtgaggtactggggaggagtgtagtctcttgccgatgtctc 509 || ||||||| ||| || || || ||||||||||||||||||||||| || || ||||| Sbjct: 847 gagatcagtcagaagcagcgtaagatactggggaggagtgtagtctctcgctgaagtctc 788 Query: 510 aacttccaca 519 ||| |||||| Sbjct: 787 aacctccaca 778
>dbj|AK068908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003C02, full insert sequence Length = 1373 Score = 147 bits (74), Expect = 4e-32 Identities = 116/130 (89%) Strand = Plus / Minus Query: 390 cagtgatcataggtacagttggatgagctcatcgctcacaacggatggtgtcagaacacc 449 ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 1181 cagtgatcataggtatagttggataagctcatcgctcacaacagatggtgtcagaacacc 1122 Query: 450 aaggtcagtcaaaagaagtgtgaggtactggggaggagtgtagtctcttgccgatgtctc 509 || ||||||| ||| || || || ||||||||||||||||||||||| || || ||||| Sbjct: 1121 gagatcagtcagaagcagcgtaagatactggggaggagtgtagtctctcgctgaagtctc 1062 Query: 510 aacttccaca 519 ||| |||||| Sbjct: 1061 aacctccaca 1052
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 147 bits (74), Expect = 4e-32 Identities = 116/130 (89%) Strand = Plus / Plus Query: 390 cagtgatcataggtacagttggatgagctcatcgctcacaacggatggtgtcagaacacc 449 ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 18846732 cagtgatcataggtatagttggataagctcatcgctcacaacagatggtgtcagaacacc 18846791 Query: 450 aaggtcagtcaaaagaagtgtgaggtactggggaggagtgtagtctcttgccgatgtctc 509 || ||||||| ||| || || || ||||||||||||||||||||||| || || ||||| Sbjct: 18846792 gagatcagtcagaagcagcgtaagatactggggaggagtgtagtctctcgctgaagtctc 18846851 Query: 510 aacttccaca 519 ||| |||||| Sbjct: 18846852 aacctccaca 18846861 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 134 atatttaggaacggaggaagtacgta 159 ||||||||| |||||||||||||||| Sbjct: 10795993 atatttagggacggaggaagtacgta 10795968 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 5 ctaatccctccattcctaaatataag 30 ||||||||||||||| |||||||||| Sbjct: 5679860 ctaatccctccattcataaatataag 5679835
>emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153064 Score = 147 bits (74), Expect = 4e-32 Identities = 116/130 (89%) Strand = Plus / Minus Query: 390 cagtgatcataggtacagttggatgagctcatcgctcacaacggatggtgtcagaacacc 449 ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 49874 cagtgatcataggtatagttggataagctcatcgctcacaacagatggtgtcagaacacc 49815 Query: 450 aaggtcagtcaaaagaagtgtgaggtactggggaggagtgtagtctcttgccgatgtctc 509 || ||||||| ||| || || || ||||||||||||||||||||||| || || ||||| Sbjct: 49814 gagatcagtcagaagcagcgtaagatactggggaggagtgtagtctctcgctgaagtctc 49755 Query: 510 aacttccaca 519 ||| |||||| Sbjct: 49754 aacctccaca 49745
>emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151203 Score = 147 bits (74), Expect = 4e-32 Identities = 116/130 (89%) Strand = Plus / Plus Query: 390 cagtgatcataggtacagttggatgagctcatcgctcacaacggatggtgtcagaacacc 449 ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 16622 cagtgatcataggtatagttggataagctcatcgctcacaacagatggtgtcagaacacc 16681 Query: 450 aaggtcagtcaaaagaagtgtgaggtactggggaggagtgtagtctcttgccgatgtctc 509 || ||||||| ||| || || || ||||||||||||||||||||||| || || ||||| Sbjct: 16682 gagatcagtcagaagcagcgtaagatactggggaggagtgtagtctctcgctgaagtctc 16741 Query: 510 aacttccaca 519 ||| |||||| Sbjct: 16742 aacctccaca 16751
>gb|BT018602.1| Zea mays clone EL01N0449E02.d mRNA sequence Length = 1546 Score = 131 bits (66), Expect = 2e-27 Identities = 111/126 (88%) Strand = Plus / Plus Query: 394 gatcataggtacagttggatgagctcatcgctcacaacggatggtgtcagaacaccaagg 453 |||||||| |||||||||||||||||||| || ||||| || || ||||||||||||||| Sbjct: 167 gatcatagatacagttggatgagctcatcactaacaacagacggggtcagaacaccaagg 226 Query: 454 tcagtcaaaagaagtgtgaggtactggggaggagtgtagtctcttgccgatgtctcaact 513 || |||| || |||||||| || |||||||| |||||||||||||| |||||||| ||| Sbjct: 227 tcggtcaggaggagtgtgagatattggggaggggtgtagtctcttgcagatgtctccact 286 Query: 514 tccaca 519 |||||| Sbjct: 287 tccaca 292
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 62 acatactttagagtgtacattcgttcattttgtttcgaatgtagccccctaatgaaatct 121 |||||||||||||| || |||| |||||||| | ||||||||| ||| || ||||||| Sbjct: 73959 acatactttagagtatagattcaatcattttgctccgaatgtagacccttagtgaaatcg 73900 Query: 122 tcaaaaagactcatatttaggaacggaggaagta 155 |||||||| ||||||||||||||||| |||| Sbjct: 73899 cttaaaagacttatatttaggaacggagggagta 73866 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 86 tcattttgtttcgaatgtagccccctaatgaaatcttcaaaaagactcatatttaggaac 145 |||||||| |||| |||||| || ||| |||||| | ||||||||| |||||||||||| Sbjct: 71760 tcattttgcttcgtatgtagtcctctattgaaatgtctaaaaagacttatatttaggaac 71701 Query: 146 ggagg 150 ||||| Sbjct: 71700 ggagg 71696 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 100 atgtagccccctaatgaaatcttcaaaaagactcatatttaggaacggaggaagtac 156 |||||| || ||| |||||||| | ||||||| ||||||||||||||||| ||||| Sbjct: 90839 atgtagtccactagtgaaatctctacaaagacttatatttaggaacggagggagtac 90895 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 10 ccctccattcctaaatataagtcttttta 38 |||||| |||||||||||||||||||||| Sbjct: 71695 ccctccgttcctaaatataagtcttttta 71723 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtctttt 36 ||||||| |||||||||||||||||||| Sbjct: 73869 tccctccgttcctaaatataagtctttt 73896 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtcttt 35 ||||||| ||||||||||||||||||| Sbjct: 90891 tccctccgttcctaaatataagtcttt 90865 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtcttt 35 ||||||| ||||||||||||||||||| Sbjct: 71851 tccctccgttcctaaatataagtcttt 71825 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 126 aaagactcatatttaggaacggaggaagta 155 ||||||| ||||||||||||||||| |||| Sbjct: 71825 aaagacttatatttaggaacggagggagta 71854
>gb|DQ201147.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1a) pseudogene, complete sequence Length = 1112 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 62 acatactttagagtgtacattcgttcattttgtttcgaatgtagccccctaatgaaatct 121 |||||||||||||| || |||| |||||||| | ||||||||| ||| || ||||||| Sbjct: 910 acatactttagagtatagattcaatcattttgctccgaatgtagacccttagtgaaatcg 851 Query: 122 tcaaaaagactcatatttaggaacggaggaagta 155 |||||||| ||||||||||||||||| |||| Sbjct: 850 cttaaaagacttatatttaggaacggagggagta 817 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtctttt 36 ||||||| |||||||||||||||||||| Sbjct: 820 tccctccgttcctaaatataagtctttt 847
>gb|AF308474.1|AF308474 Hordeum vulgare asparaginase gene, complete cds Length = 2659 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtctttttaaaagttt 45 |||||||||||||||||||||||||||||||| |||| Sbjct: 1448 tccctccattcctaaatataagtctttttaaaggttt 1484 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 62 acatactttagagtgtacattcgttcattttgtt 95 |||||||||||||||||||||| ||||||||||| Sbjct: 1514 acatactttagagtgtacattcattcattttgtt 1547 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 110 ctaatgaaatcttcaaaaagactcatatttaggaacggaggaagta 155 ||||||||| ||| ||||||||| ||||||||||| ||||| |||| Sbjct: 1490 ctaatgaaacctttaaaaagacttatatttaggaatggagggagta 1445
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 109 cctaatgaaatcttcaaaaagactcatatttaggaacggaggaagta 155 |||||||||| |||| |||||||| |||||||| ||||||||||||| Sbjct: 190798 cctaatgaaaacttctaaaagacttatatttagaaacggaggaagta 190752 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtctttttaaa 40 ||||||| |||||||||||||||||||||||| Sbjct: 136687 tccctccgttcctaaatataagtctttttaaa 136718 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 125 aaaagactcatatttaggaacggaggaagta 155 |||||||| |||||||||||||||||||||| Sbjct: 194470 aaaagacttatatttaggaacggaggaagta 194500 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 118 atcttcaaaaagactcatatttaggaacggaggaagta 155 ||||| ||||||||| ||||||||||||||||| |||| Sbjct: 136721 atctttaaaaagacttatatttaggaacggagggagta 136684 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 17 ttcctaaatataagtctttttaaa 40 |||||||||||||||||||||||| Sbjct: 96982 ttcctaaatataagtctttttaaa 97005 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtctttt 36 ||||||| |||||||||||||||||||| Sbjct: 306 tccctccgttcctaaatataagtctttt 279 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 125 aaaagactcatatttaggaacggaggaagta 155 |||||||| ||||||||||||||||| |||| Sbjct: 279 aaaagacttatatttaggaacggagggagta 309 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 11 cctccattcctaaatataagtctttt 36 ||||| |||||||||||||||||||| Sbjct: 194495 cctccgttcctaaatataagtctttt 194470 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 124 aaaaagactcatatttaggaacggag 149 ||||||||| |||||||||||||||| Sbjct: 143311 aaaaagacttatatttaggaacggag 143336 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 ctccattcctaaatataagtcttttt 37 |||| ||||||||||||||||||||| Sbjct: 143336 ctccgttcctaaatataagtcttttt 143311 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Minus Query: 118 atcttcaaaaagactcatatttaggaacggaggaagta 155 ||||| ||||||||| ||||||||||||| ||| |||| Sbjct: 97008 atctttaaaaagacttatatttaggaacgaagggagta 96971 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 3 atctaatccctccattcctaaatataag 30 ||||| ||||||| |||||||||||||| Sbjct: 1757 atctactccctccgttcctaaatataag 1730 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 62 acatactttagagtgtacattcgttcattttg 93 ||||||||||||||||| |||| |||||||| Sbjct: 240 acatactttagagtgtagattcactcattttg 209
>gb|AY268139.1| Hordeum vulgare BAC 184G9, complete sequece Length = 120562 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Minus Query: 62 acatactttagagtgtacattcgttcattttgtttcgaatgtagccccctaatgaaatct 121 ||||| |||| |||||| ||| ||||||||| |||| || ||| | | |||| |||||| Sbjct: 27530 acataatttaaagtgtaggttcattcattttgcttcgtatatagtctcataataaaatct 27471 Query: 122 tcaaaaagactcatatttaggaacggaggaagta 155 | ||||| | | |||||||||||||||||||||| Sbjct: 27470 ttaaaaatatttatatttaggaacggaggaagta 27437
>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence Length = 102433 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 125 aaaagactcatatttaggaacggaggaagtacgt 158 |||||||| ||||||||||||||||||||||||| Sbjct: 14623 aaaagacttatatttaggaacggaggaagtacgt 14656 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtctttttaaaagttttact 49 ||||||| |||||||||||||||||||||| || ||||||| Sbjct: 81139 tccctccgttcctaaatataagtctttttagaaattttact 81179 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 125 aaaagactcatatttaggaacggaggaagta 155 |||||||| |||||||||||||||||||||| Sbjct: 81270 aaaagacttatatttaggaacggaggaagta 81300 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Minus Query: 62 acatactttagagtgtacattcgttcattttgtttcgaatgtagccccctaatgaaatct 121 |||||||||||||| || |||| |||||||| | | |||||| ||| || ||||||| Sbjct: 89236 acatactttagagtatagattcaatcattttgctccatatgtagacccttagtgaaatcg 89177 Query: 122 tcaaaaagactcatatttaggaacggaggaagta 155 |||||||| ||||||||||||||||| |||| Sbjct: 89176 cttaaaagacttatatttaggaacggagggagta 89143 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 100 atgtagccccctaatgaaatcttcaaaaagactcatatttaggaacggaggaagtac 156 |||||| || ||| |||||||| | ||||||| ||||||||||||||||| ||||| Sbjct: 89251 atgtagtccactagtgaaatctctagaaagacttatatttaggaacggagggagtac 89307 Score = 50.1 bits (25), Expect = 0.007 Identities = 76/93 (81%) Strand = Plus / Minus Query: 63 catactttagagtgtacattcgttcattttgtttcgaatgtagccccctaatgaaatctt 122 ||||||||| ||| || |||| || |||||| | || ||||||||| || | |||| | Sbjct: 81228 catactttaaagtatagattcatttattttgctccgtatgtagccctttagtaaaatttc 81169 Query: 123 caaaaagactcatatttaggaacggaggaagta 155 ||||||||| ||||||||||||||||| |||| Sbjct: 81168 taaaaagacttatatttaggaacggagggagta 81136 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtctttt 36 ||||||| |||||||||||||||||||| Sbjct: 89146 tccctccgttcctaaatataagtctttt 89173 Score = 48.1 bits (24), Expect = 0.029 Identities = 48/56 (85%) Strand = Plus / Minus Query: 100 atgtagccccctaatgaaatcttcaaaaagactcatatttaggaacggaggaagta 155 |||||| || ||| |||||||| | ||||||| ||||||||||||||||| |||| Sbjct: 14545 atgtagtccactagtgaaatctctacaaagacttatatttaggaacggagggagta 14490 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtcttt 35 ||||||| ||||||||||||||||||| Sbjct: 89303 tccctccgttcctaaatataagtcttt 89277 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 115 gaaatcttcaaaaagactcatatttaggaacggag 149 ||||||| ||||||||| |||||||||||||||| Sbjct: 83505 gaaatctctaaaaagacttatatttaggaacggag 83471 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 12 ctccattcctaaatataagtcttttta 38 |||| |||||||||||||||||||||| Sbjct: 83471 ctccgttcctaaatataagtcttttta 83497 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtcttt 35 ||||||| ||||||||||||||||||| Sbjct: 14493 tccctccgttcctaaatataagtcttt 14519 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 11 cctccattcctaaatataagtctttt 36 ||||| |||||||||||||||||||| Sbjct: 81295 cctccgttcctaaatataagtctttt 81270 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 11 cctccattcctaaatataagtctttt 36 ||||| |||||||||||||||||||| Sbjct: 14648 cctccgttcctaaatataagtctttt 14623
>gb|AF334758.1|AF334758 Hordeum vulgare homeodomain protein JUBEL1 (JuBel1) gene, complete cds Length = 13757 Score = 60.0 bits (30), Expect = 8e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 68 tttagagtgtacattcgttcattttgtttcgaatgtagccccctaatgaaatcttcaaaa 127 ||||||||||| ||| |||||||| |||| |||||| | |||| ||||||||| || | Sbjct: 11736 tttagagtgtaaatttactcattttgcttcgtatgtagtctcctagtgaaatctttaaga 11677 Query: 128 agactcatatttaggaacggag 149 ||||| |||||| ||||||||| Sbjct: 11676 agacttatattttggaacggag 11655 Score = 40.1 bits (20), Expect = 7.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 12 ctccattcctaaatataagtctttttaaaagttttacttggaggctacatac 63 |||| |||| ||||||||||||| ||||| ||| ||| |||| |||||||| Sbjct: 11655 ctccgttccaaaatataagtcttcttaaagatttcactaggagactacatac 11706
>gb|AY641411.1| Hordeum vulgare subsp. vulgare Rph15.1 (Rph15.1) pseudogene, complete cds Length = 15688 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 62 acatactttagagtgtacattcgttcattttgtttcgaatgtagccccctaatgaaatct 121 ||||| ||||||||||| |||| ||||||||||| || || ||| | |||||||||||| Sbjct: 15123 acatattttagagtgtagattcattcattttgttccgtatatagttctctaatgaaatct 15182 Query: 122 tcaaaaagactcatatttaggaacggaggaagta 155 | || | |||| ||||||| || |||||||||| Sbjct: 15183 ttaatacgacttatatttaaaaatggaggaagta 15216 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 10 ccctccattcctaaatataagtctttt 36 |||||| |||||||||||||||||||| Sbjct: 8882 ccctccgttcctaaatataagtctttt 8856 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 125 aaaagactcatatttaggaacggagg 150 |||||||| ||||||||||||||||| Sbjct: 8856 aaaagacttatatttaggaacggagg 8881 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 ttcctaaatataagtcttttta 38 |||||||||||||||||||||| Sbjct: 8732 ttcctaaatataagtcttttta 8753 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 4 tctaatccctccattcctaaatataagtctttttaaa 40 |||| ||||||| | |||||||||| ||||||||||| Sbjct: 15051 tctactccctccgtccctaaatatacgtctttttaaa 15087 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 124 aaaaagactcatatttaggaacggaggaagta 155 ||||||||| |||||||||||| |||| |||| Sbjct: 8752 aaaaagacttatatttaggaactgagggagta 8721
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 3 atctaatccctccattcctaaatataagtcttttta 38 ||||| ||||||| |||||||||||||||||||||| Sbjct: 76978 atctactccctccgttcctaaatataagtcttttta 76943 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtcttttta 38 ||||||| |||||||||||||||||||||| Sbjct: 76815 tccctccgttcctaaatataagtcttttta 76844 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 115 gaaatcttcaaaaagactcatatttaggaacggaggaagta 155 ||||||| ||||||||| ||||||||||||||||| |||| Sbjct: 76935 gaaatctctaaaaagacttatatttaggaacggagggagta 76975 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 124 aaaaagactcatatttaggaacggaggaagtac 156 ||||||||| ||||||||||||||||| ||||| Sbjct: 76843 aaaaagacttatatttaggaacggagggagtac 76811 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtctttttaaaagttttact 49 ||||||| || ||||||||||||||||||| | |||||||| Sbjct: 29837 tccctccgtttctaaatataagtctttttagaggttttact 29877
>gb|AY133250.1|AY133250S1 Hordeum vulgare subsp. vulgare starch synthase II gene, exons 1 through 8 Length = 4976 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 11 cctccattcctaaatataagtcttttta 38 |||||||||||||||||||||||||||| Sbjct: 2213 cctccattcctaaatataagtcttttta 2240 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Minus Query: 113 atgaaatcttcaaaaagactcatatttaggaacggaggaagtac 156 ||||||||| ||||||||| ||||||||||| ||||| ||||| Sbjct: 2250 atgaaatctataaaaagacttatatttaggaatggaggcagtac 2207
>ref|NM_105893.2| Arabidopsis thaliana GTP binding / translation initiation factor AT1G72340 mRNA, complete cds Length = 1296 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 442 agaacaccaaggtcagtcaaaagaagtgtgaggtactggggaggagtgtagtctc 496 ||||||||||||||||| || || ||||| |||||||| || ||||| ||||||| Sbjct: 1120 agaacaccaaggtcagtgaagaggagtgttaggtactgaggcggagtatagtctc 1066
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtctttttaaaagttttacttggaggctacatac 63 ||||||| |||||||||||||||||||||| | |||| ||| || | |||||||| Sbjct: 52471 tccctccgttcctaaatataagtctttttagatgtttcactaggggactacatac 52417 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtcttttta 38 ||||||| |||||||||||||||||||||| Sbjct: 57347 tccctccgttcctaaatataagtcttttta 57376 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 111 taatgaaatcttcaaaaagactcatatttaggaacggaggaagta 155 |||||||| || ||||||||| ||||||||||||||||| |||| Sbjct: 57388 taatgaaacctctaaaaagacttatatttaggaacggagggagta 57344 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 62 acatactttagagtgtacattcgttcattttgtttcgaatgtag 105 ||||||||||||||||| ||| |||||||| ||||| |||||| Sbjct: 69704 acatactttagagtgtaaatttattcattttatttcgtatgtag 69747 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 124 aaaaagactcatatttaggaacggaggaagta 155 ||||||||| ||||||||||||||||| |||| Sbjct: 52443 aaaaagacttatatttaggaacggagggagta 52474
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 54.0 bits (27), Expect = 5e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 62 acatactttagagtgtacattcgttcattttgtttcgaatgtagccccctaatgaaatct 121 ||||||||||||||||| |||| |||||||| | | ||||| ||| || ||||||| Sbjct: 93822 acatactttagagtgtagattcactcattttgctctgtatgtaatcccttagtgaaatcg 93763 Query: 122 tcaaaaagactcatatttaggaacggaggaagtac 156 |||||||| ||||||||||||||||| ||||| Sbjct: 93762 cttaaaagacttatatttaggaacggagggagtac 93728 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 62 acatactttagagtgtacattcgttcattttgtttcgaatgtagccccctaatgaaatct 121 ||||| |||||||||||||||| |||||||| |||| |||||| | || ||||||| Sbjct: 67878 acatattttagagtgtacattcaatcattttgcttcgtatgtagacatatagtgaaatcg 67819 Query: 122 tcaaaaagactcatatttaggaacgg 147 |||||||| |||||||||||||| Sbjct: 67818 cttaaaagacttatatttaggaacgg 67793 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtctttt 36 ||||||| |||||||||||||||||||| Sbjct: 93732 tccctccgttcctaaatataagtctttt 93759 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtcttt 35 ||||||| ||||||||||||||||||| Sbjct: 67945 tccctccgttcctaaatataagtcttt 67919 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtcttt 35 ||||||| ||||||||||||||||||| Sbjct: 55718 tccctccgttcctaaatataagtcttt 55692 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 126 aaagactcatatttaggaacggaggaagta 155 ||||||| ||||||||||||||||| |||| Sbjct: 67919 aaagacttatatttaggaacggagggagta 67948 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 126 aaagactcatatttaggaacggaggaagta 155 ||||||| ||||||||||||||||| |||| Sbjct: 55692 aaagacttatatttaggaacggagggagta 55721 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 ttcctaaatataagtcttttta 38 |||||||||||||||||||||| Sbjct: 4744 ttcctaaatataagtcttttta 4765 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtctttttaaaagttttact 49 ||||||| | |||||||||||||||||| ||| ||||||| Sbjct: 55561 tccctccgtacctaaatataagtcttttaaaatattttact 55601 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 aaaaagactcatatttaggaacgga 148 ||||||||| ||||||||||||||| Sbjct: 4764 aaaaagacttatatttaggaacgga 4740 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ttcctaaatataagtctttt 36 |||||||||||||||||||| Sbjct: 67796 ttcctaaatataagtctttt 67815
>gb|BT000134.1| Arabidopsis thaliana putative translation initiation factor EIF-2B alpha subunit (At1g72340) mRNA, complete cds Length = 1210 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 442 agaacaccaaggtcagtcaaaagaagtgtgaggtactggggaggagtgtagtctc 496 ||||||||||||||||| || || ||||| |||||||| || ||||| ||||||| Sbjct: 1103 agaacaccaaggtcagtgaagaggagtgttaggtactgaggcggagtatagtctc 1049
>gb|AY062581.1| Arabidopsis thaliana putative translation initiation factor EIF-2B alpha subunit (T10D10.19) mRNA, complete cds Length = 1238 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 442 agaacaccaaggtcagtcaaaagaagtgtgaggtactggggaggagtgtagtctc 496 ||||||||||||||||| || || ||||| |||||||| || ||||| ||||||| Sbjct: 1120 agaacaccaaggtcagtgaagaggagtgttaggtactgaggcggagtatagtctc 1066
>gb|AF287726.1|AF287726 Hordeum vulgare clone pFL699 1,4-beta-D xylan xylanohydrolase gene, complete cds Length = 5474 Score = 54.0 bits (27), Expect = 5e-04 Identities = 79/95 (83%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 62 acatactttagagtgtacattcgttcattttgtttcgaatgtagccccctaatgaaatct 121 ||||| ||||| |||||||||| ||||||||||| || |||||| || |||||||| Sbjct: 438 acatattttagcgtgtacattcattcattttgttccgtatgtag-tatatattgaaatct 496 Query: 122 tcaaaaagactcatatttaggaacggaggaagtac 156 | |||| | || ||||||||||||||||| ||||| Sbjct: 497 ttaaaaggcctgatatttaggaacggagggagtac 531
>emb|BX813611.1|CNS0AE9X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB27ZH07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 314 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 442 agaacaccaaggtcagtcaaaagaagtgtgaggtactggggaggagtgtagtctc 496 ||||||||||||||||| || || ||||| |||||||| || ||||| ||||||| Sbjct: 195 agaacaccaaggtcagtgaagaggagtgttaggtactgaggcggagtatagtctc 141
>gb|AC016529.7|AC016529 Arabidopsis thaliana chromosome 1 BAC T10D10 genomic sequence, complete sequence Length = 87039 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 442 agaacaccaaggtcagtcaaaagaagtgtgaggtactggggaggagtgtagtctc 496 ||||||||||||||||| || || ||||| |||||||| || ||||| ||||||| Sbjct: 74793 agaacaccaaggtcagtgaagaggagtgttaggtactgaggcggagtatagtctc 74847
>gb|AY086207.1| Arabidopsis thaliana clone 22437 mRNA, complete sequence Length = 1243 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 442 agaacaccaaggtcagtcaaaagaagtgtgaggtactggggaggagtgtagtctc 496 ||||||||||||||||| || || ||||| |||||||| || ||||| ||||||| Sbjct: 1120 agaacaccaaggtcagtgaagaggagtgttaggtactgaggcggagtatagtctc 1066
>emb|AJ400714.1|TAE400714 Triticum aestivum vp1D gene for VIVIPAROUS1, exons 1-6 Length = 4230 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtcttt 35 ||||||||||||||||||||||||||| Sbjct: 2788 tccctccattcctaaatataagtcttt 2814 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtcttt 35 ||||||| ||||||||||||||||||| Sbjct: 2943 tccctccgttcctaaatataagtcttt 2917 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 126 aaagactcatatttaggaacggaggaagta 155 ||||||| ||||||||||||||||| |||| Sbjct: 2917 aaagacttatatttaggaacggagggagta 2946
>gb|U87149.1|HVU87149 Hordeum vulgare nucellin gene, complete cds Length = 3686 Score = 54.0 bits (27), Expect = 5e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 62 acatactttagagtgtacattcgttcattttgtttcgaatgtagccccctaatgaaatct 121 ||||||||||||||||| |||| |||||||| | | ||||| ||| || ||||||| Sbjct: 2087 acatactttagagtgtagattcactcattttgctctgtatgtaatcccttagtgaaatcg 2146 Query: 122 tcaaaaagactcatatttaggaacggaggaagtac 156 |||||||| ||||||||||||||||| ||||| Sbjct: 2147 cttaaaagacttatatttaggaacggagggagtac 2181 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtctttt 36 ||||||| |||||||||||||||||||| Sbjct: 2177 tccctccgttcctaaatataagtctttt 2150
>gb|AY821693.1| Australopyrum velutinum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1595 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtcttttta 38 ||||||| |||||||||||||||||||||| Sbjct: 1219 tccctccgttcctaaatataagtcttttta 1248 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 124 aaaaagactcatatttaggaacggaggaagta 155 ||||||||| ||||||||||||||||| |||| Sbjct: 1247 aaaaagacttatatttaggaacggagggagta 1216 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 17 ttcctaaatataagtcttttta 38 |||||||||||||||||||||| Sbjct: 1366 ttcctaaatataagtcttttta 1345 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 124 aaaaagactcatatttaggaacggaggaagtac 156 ||||||||| |||||||||||| |||| ||||| Sbjct: 1346 aaaaagacttatatttaggaacagagggagtac 1378
>gb|AY821692.1| Australopyrum retrofractum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1602 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtcttttta 38 ||||||| |||||||||||||||||||||| Sbjct: 1225 tccctccgttcctaaatataagtcttttta 1254 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 124 aaaaagactcatatttaggaacggaggaagta 155 ||||||||| ||||||||||||||||| |||| Sbjct: 1253 aaaaagacttatatttaggaacggagggagta 1222 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 17 ttcctaaatataagtcttttta 38 |||||||||||||||||||||| Sbjct: 1372 ttcctaaatataagtcttttta 1351
>gb|DQ201157.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai cryptochrome 2 (Cry2) gene, partial cds; and stowaway MITE, complete sequence Length = 2686 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 62 acatactttagagtgtacattcgttcattttgtttcgaatgtagccccctaatgaaatct 121 ||||||||||||||||| |||| |||||||| || | || ||| | ||| |||||| | Sbjct: 1730 acatactttagagtgtatattcactcattttgctttgtatttagtcatctagtgaaatat 1789 Query: 122 tcaaaaagactcatatttaggaacggaggaagta 155 |||||||| ||||||||||||||||| |||| Sbjct: 1790 cttaaaagacttatatttaggaacggagggagta 1823 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtctttt 36 ||||||| |||||||||||||||||||| Sbjct: 1820 tccctccgttcctaaatataagtctttt 1793
>gb|AF343493.1| Secale cereale clone pla 3-phosphoglycerate kinase (Pgk-1) gene, partial cds; nuclear gene for plastid product Length = 1535 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtcttttta 38 ||||||| |||||||||||||||||||||| Sbjct: 1374 tccctccgttcctaaatataagtcttttta 1345 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 124 aaaaagactcatatttaggaacggagg 150 ||||||||| ||||||||||||||||| Sbjct: 1346 aaaaagacttatatttaggaacggagg 1372
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence Length = 103866 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 126 aaagactcatatttaggaacggaggaagta 155 ||||||| |||||||||||||||||||||| Sbjct: 23243 aaagacttatatttaggaacggaggaagta 23272 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtcttt 35 ||||||| ||||||||||||||||||| Sbjct: 51929 tccctccgttcctaaatataagtcttt 51903 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtcttt 35 ||||||| ||||||||||||||||||| Sbjct: 23115 tccctccgttcctaaatataagtcttt 23141 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 126 aaagactcatatttaggaacggaggaagta 155 ||||||| ||||||||||||||||| |||| Sbjct: 51903 aaagacttatatttaggaacggagggagta 51932 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 ttcctaaatataagtcttttta 38 |||||||||||||||||||||| Sbjct: 51779 ttcctaaatataagtcttttta 51800 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 126 aaagactcatatttaggaacggaggaagta 155 ||||||| ||||||||||||||||| |||| Sbjct: 23141 aaagacttatatttaggaacggagggagta 23112 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 aaaaagactcatatttaggaacgga 148 ||||||||| ||||||||||||||| Sbjct: 51799 aaaaagacttatatttaggaacgga 51775 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 cctccattcctaaatataagtcttt 35 ||||| ||||||||||||||||||| Sbjct: 23267 cctccgttcctaaatataagtcttt 23243
>gb|AY008692.1| Hordeum vulgare transcription factor GAMyb (Gamyb) gene, complete cds Length = 6228 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 3 atctaatccctccattcctaaatataagtctttt 36 ||||| ||||||| |||||||||||||||||||| Sbjct: 5153 atctactccctccgttcctaaatataagtctttt 5186 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 134 atatttaggaacggaggaagtac 156 ||||||||||||||||||||||| Sbjct: 5468 atatttaggaacggaggaagtac 5490 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1 gaatctaatccctccattcctaaatataagt 31 ||||||| ||||||| ||||||||||||||| Sbjct: 5228 gaatctactccctccgttcctaaatataagt 5258 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 125 aaaagactcatatttaggaacggaggaagta 155 |||||||| ||||||||||||||||| |||| Sbjct: 5186 aaaagacttatatttaggaacggagggagta 5156
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Minus Query: 62 acatactttagagtgtacattcgttcattttgtttcgaatgtagccccctaatgaaatct 121 |||||||||| ||||| |||| ||||||| |||| ||||| ||| || |||||||| Sbjct: 47373 acatactttaaagtgttgattcactcattttacttcgtatgtaaacccttagtgaaatct 47314 Query: 122 tcaaaaagactcatatttaggaacggaggaagta 155 |||||||| ||||||||||||||||| |||| Sbjct: 47313 cttaaaagacttatatttaggaacggagggagta 47280 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtctttt 36 ||||||| |||||||||||||||||||| Sbjct: 47283 tccctccgttcctaaatataagtctttt 47310 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtcttttta 38 ||||||| ||| |||||||||||||||||| Sbjct: 47440 tccctccgttcgtaaatataagtcttttta 47411 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 4 tctaatccctccattcctaaatataagtctttttaaa 40 |||| ||||||| |||||||||||||| | ||||||| Sbjct: 61172 tctactccctccgttcctaaatataagaccttttaaa 61136
>gb|DQ154923.1| Hordeum vulgare RAB7 (RAB7) gene, exons 1 through 6 and partial cds; and delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, complete cds Length = 13878 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtcttttta 38 |||||||||||||||||||| ||||||||| Sbjct: 7416 tccctccattcctaaatataggtcttttta 7445 Score = 48.1 bits (24), Expect = 0.029 Identities = 73/88 (82%), Gaps = 1/88 (1%) Strand = Plus / Plus Query: 62 acatactttagagtgtacattcgttcattttgtttcgaatgtagccccctaatgaaatct 121 ||||||||||||||||| || | |||||||| || | |||||| || || || ||||| Sbjct: 7482 acatactttagagtgtagatgcactcattttgctttgtatgtagtcca-tagtgtaatct 7540 Query: 122 tcaaaaagactcatatttaggaacggag 149 ||||||||| |||||||||||||||| Sbjct: 7541 ctaaaaagacttatatttaggaacggag 7568 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 12 ctccattcctaaatataagtcttttta 38 |||| |||||||||||||||||||||| Sbjct: 7568 ctccgttcctaaatataagtcttttta 7542
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 111 taatgaaatcttcaaaaagactcatatttaggaacggaggaagta 155 |||||||| | || |||||||| ||||||||||||||||| |||| Sbjct: 148680 taatgaaaacctctaaaagacttatatttaggaacggagggagta 148724 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtctttt 36 ||||||| |||||||||||||||||||| Sbjct: 148721 tccctccgttcctaaatataagtctttt 148694
>gb|DQ201148.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1b) pseudogene, complete sequence Length = 1147 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 100 atgtagccccctaatgaaatcttcaaaaagactcatatttaggaacggaggaagtac 156 |||||| || ||| |||||||| | ||||||| ||||||||||||||||| ||||| Sbjct: 385 atgtagtccactagtgaaatctctacaaagacttatatttaggaacggagggagtac 441 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtcttt 35 ||||||| ||||||||||||||||||| Sbjct: 437 tccctccgttcctaaatataagtcttt 411
>emb|AJ272313.1|HVU272313 Hordeum vulgare mRNA for gamma tubulin (gtub gene) Length = 2039 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 2 aatctaatccctccattcctaaatataagtcttttta 38 |||||| ||| ||| |||||||||||||||||||||| Sbjct: 1902 aatctactccatccgttcctaaatataagtcttttta 1938 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Minus Query: 107 cccctaatgaaatcttcaaaaagactcatatttaggaacgga 148 |||||| |||||| | ||||||||| ||||||||||||||| Sbjct: 1954 cccctattgaaatgtctaaaaagacttatatttaggaacgga 1913
>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete sequence; splicing factor SF2-like protein (SF2) and universal stress protein (USP1) genes and Hv receptor-kinase-like pseudogene, complete cds; and retrotransposons Sandra6 and Sandra7, complete sequence Length = 82293 Score = 50.1 bits (25), Expect = 0.007 Identities = 73/89 (82%) Strand = Plus / Plus Query: 62 acatactttagagtgtacattcgttcattttgtttcgaatgtagccccctaatgaaatct 121 ||||| |||| |||||| |||| |||||||| |||| |||||| | |||| |||||| | Sbjct: 50538 acatattttaaagtgtagattcactcattttgcttcgtatgtagactcctagtgaaatat 50597 Query: 122 tcaaaaagactcatatttaggaacggagg 150 |||||||| |||| |||||||||||| Sbjct: 50598 cttaaaagacttatatctaggaacggagg 50626 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 8 atccctccattcctaaatataagtctttt 36 |||||||| |||||| ||||||||||||| Sbjct: 50629 atccctccgttcctagatataagtctttt 50601 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 4 tctaatccctccattcctaaatataagtcttt 35 |||| ||||||| ||| ||||||||||||||| Sbjct: 50467 tctactccctccgttcttaaatataagtcttt 50498
>gb|AF338431.1|AF338431 Aegilops tauschii starch branching enzyme IIa gene, complete cds Length = 11475 Score = 50.1 bits (25), Expect = 0.007 Identities = 74/89 (83%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 68 tttagagtgtacattcgttcattttgtttcgaatgtagccccctaatgaaatcttcaaaa 127 ||||||||||| |||| |||||||| |||| |||||| || || |||||||| | | Sbjct: 8637 tttagagtgtagattcactcattttgcttcgtatgtagtcca-tagtgaaatctctacag 8695 Query: 128 agactcatatttaggaacggaggaagtac 156 ||||| ||||||||||||||||| ||||| Sbjct: 8696 agacttatatttaggaacggagggagtac 8724 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtcttt 35 ||||||| ||||||||||||||||||| Sbjct: 8570 tccctccgttcctaaatataagtcttt 8596 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 126 aaagactcatatttaggaacggaggaagta 155 ||||||| ||||||||||||||||| |||| Sbjct: 8596 aaagacttatatttaggaacggagggagta 8567 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtct 33 ||||||| ||||||||||||||||| Sbjct: 8720 tccctccgttcctaaatataagtct 8696
>gb|AF122050.1|AF122050 Hordeum vulgare limit dextrinase gene, complete cds Length = 11462 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 124 aaaaagactcatatttaggaacggaggaagtac 156 ||||||||| ||||||||||||||||| ||||| Sbjct: 3629 aaaaagacttatatttaggaacggagggagtac 3661 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtcttttt 37 ||||||| ||||||||||||||||||||| Sbjct: 3657 tccctccgttcctaaatataagtcttttt 3629
>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds, cultivar:Igri Length = 11684 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtcttttt 37 ||||||| ||||||||||||||||||||| Sbjct: 7561 tccctccgttcctaaatataagtcttttt 7533 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 124 aaaaagactcatatttaggaacggaggaagta 155 ||||||||| ||||||||||||||||| |||| Sbjct: 7533 aaaaagacttatatttaggaacggagggagta 7564 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Minus Query: 114 tgaaatcttcaaaaagactcatatttaggaacggaggaagtac 156 ||||||||| |||| |||| |||||||||||||||| ||||| Sbjct: 7443 tgaaatctttaaaaggacttgtatttaggaacggagggagtac 7401
>ref|NM_104268.3| Arabidopsis thaliana GTP binding / translation initiation factor AT1G53900 mRNA, complete cds Length = 1899 Score = 48.1 bits (24), Expect = 0.029 Identities = 57/68 (83%) Strand = Plus / Minus Query: 433 gatggtgtcagaacaccaaggtcagtcaaaagaagtgtgaggtactggggaggagtgtag 492 ||||| || ||||||||||| ||||| || || || || | |||||| |||||||||||| Sbjct: 1706 gatggagtgagaacaccaagatcagtgaagagtagagtcaagtactgaggaggagtgtag 1647 Query: 493 tctcttgc 500 || ||||| Sbjct: 1646 tcccttgc 1639
>ref|NM_104265.2| Arabidopsis thaliana GTP binding / translation initiation factor AT1G53880 mRNA, complete cds Length = 1948 Score = 48.1 bits (24), Expect = 0.029 Identities = 57/68 (83%) Strand = Plus / Minus Query: 433 gatggtgtcagaacaccaaggtcagtcaaaagaagtgtgaggtactggggaggagtgtag 492 ||||| || ||||||||||| ||||| || || || || | |||||| |||||||||||| Sbjct: 1706 gatggagtgagaacaccaagatcagtgaagagtagagtcaagtactgaggaggagtgtag 1647 Query: 493 tctcttgc 500 || ||||| Sbjct: 1646 tcccttgc 1639
>gb|AY643842.1|AY643842S1 Hordeum vulgare subsp. vulgare clone BAC 519K7 hardness locus region Length = 12998 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtctttt 36 ||||||| |||||||||||||||||||| Sbjct: 12672 tccctccgttcctaaatataagtctttt 12699 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 125 aaaagactcatatttaggaacggaggaagta 155 |||||||| ||||||||||||||||| |||| Sbjct: 12699 aaaagacttatatttaggaacggagggagta 12669
>gb|BC003426.1| Mus musculus eukaryotic translation initiation factor 2B, subunit 1 (alpha), mRNA (cDNA clone MGC:6458 IMAGE:2615801), complete cds Length = 1515 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 396 tcataggtacagttggatgagctcatcgctcacaacggatggtgtcagaacaccaaggtc 455 |||||||||||| | ||||||||||||||| ||| | ||||| |||| ||||| ||||| Sbjct: 962 tcataggtacagcttgatgagctcatcgcttacagcagatggcgtcaacacacccaggtc 903
>ref|NM_145371.1| Mus musculus eukaryotic translation initiation factor 2B, subunit 1 (alpha) (Eif2b1), mRNA Length = 1515 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 396 tcataggtacagttggatgagctcatcgctcacaacggatggtgtcagaacaccaaggtc 455 |||||||||||| | ||||||||||||||| ||| | ||||| |||| ||||| ||||| Sbjct: 962 tcataggtacagcttgatgagctcatcgcttacagcagatggcgtcaacacacccaggtc 903
>gb|AC127313.3| Mus musculus BAC clone RP23-311A21 from 5, complete sequence Length = 195651 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Plus Query: 396 tcataggtacagttggatgagctcatcgctcacaacggatggtgtcagaacaccaaggtc 455 |||||||||||| | ||||||||||||||| ||| | ||||| |||| ||||| ||||| Sbjct: 147374 tcataggtacagcttgatgagctcatcgcttacagcagatggcgtcaacacacccaggtc 147433
>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H Length = 59748 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtctttt 36 ||||||| |||||||||||||||||||| Sbjct: 23277 tccctccgttcctaaatataagtctttt 23304 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 125 aaaagactcatatttaggaacggaggaagta 155 |||||||| ||||||||||||||||| |||| Sbjct: 23304 aaaagacttatatttaggaacggagggagta 23274 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Plus Query: 114 tgaaatcttcaaaaagactcatatttaggaacggaggaagta 155 ||||||||| | ||||||| |||||||||||| |||| |||| Sbjct: 23396 tgaaatctttagaaagacttatatttaggaacagagggagta 23437 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 ttcctaaatataagtctttttaaa 40 ||||||||||||||||||| |||| Sbjct: 23426 ttcctaaatataagtctttctaaa 23403
>dbj|AK133695.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330440K01 product:eukaryotic translation initiation factor 2B, subunit 1 (alpha), full insert sequence Length = 1939 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 396 tcataggtacagttggatgagctcatcgctcacaacggatggtgtcagaacaccaaggtc 455 |||||||||||| | ||||||||||||||| ||| | ||||| |||| ||||| ||||| Sbjct: 963 tcataggtacagcttgatgagctcatcgcttacagcagatggcgtcaacacacccaggtc 904
>dbj|AK088066.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430003B07 product:TRANSLATION INITIATION FACTOR EIF-2B ALPHA SUBUNIT (EIF-2B GDP-GTP EXCHANGE FACTOR) homolog [Rattus norvegicus], full insert sequence Length = 1485 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 396 tcataggtacagttggatgagctcatcgctcacaacggatggtgtcagaacaccaaggtc 455 |||||||||||| | ||||||||||||||| ||| | ||||| |||| ||||| ||||| Sbjct: 958 tcataggtacagcttgatgagctcatcgcttacagcagatggcgtcaacacacccaggtc 899
>dbj|AB182944.1| Triticum aestivum Wknox1b gene for KN1 homeobox protein, complete cds Length = 10847 Score = 48.1 bits (24), Expect = 0.029 Identities = 72/88 (81%) Strand = Plus / Plus Query: 68 tttagagtgtacattcgttcattttgtttcgaatgtagccccctaatgaaatcttcaaaa 127 ||||||||||| |||| |||||||| | || |||||| | | | ||||||||| | || Sbjct: 7780 tttagagtgtagattcactcattttgctccgtatgtagtcacttgttgaaatctttataa 7839 Query: 128 agactcatatttaggaacggaggaagta 155 |||| ||||||||||||||||| |||| Sbjct: 7840 agacaaatatttaggaacggagggagta 7867
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 62 acatactttagagtgtacattcgttcattttgtttcgaatgtag 105 ||||||||||||||||| |||| ||| |||||||| | |||||| Sbjct: 6268 acatactttagagtgtagattcattctttttgttttgtatgtag 6311
>gb|AC009324.2| Arabidopsis thaliana chromosome I BAC T18A20 genomic sequence, complete sequence Length = 85413 Score = 48.1 bits (24), Expect = 0.029 Identities = 57/68 (83%) Strand = Plus / Minus Query: 433 gatggtgtcagaacaccaaggtcagtcaaaagaagtgtgaggtactggggaggagtgtag 492 ||||| || ||||||||||| ||||| || || || || | |||||| |||||||||||| Sbjct: 66034 gatggagtgagaacaccaagatcagtgaagagtagagtcaagtactgaggaggagtgtag 65975 Query: 493 tctcttgc 500 || ||||| Sbjct: 65974 tcccttgc 65967 Score = 48.1 bits (24), Expect = 0.029 Identities = 57/68 (83%) Strand = Plus / Minus Query: 433 gatggtgtcagaacaccaaggtcagtcaaaagaagtgtgaggtactggggaggagtgtag 492 ||||| || ||||||||||| ||||| || || || || | |||||| |||||||||||| Sbjct: 53469 gatggagtgagaacaccaagatcagtgaagagtagagtcaagtactgaggaggagtgtag 53410 Query: 493 tctcttgc 500 || ||||| Sbjct: 53409 tcccttgc 53402
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtctttt 36 ||||||| |||||||||||||||||||| Sbjct: 91841 tccctccgttcctaaatataagtctttt 91814 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 20 ctaaatataagtctttttaaaagttttacttggaggctacatac 63 |||||||||||||||||||||| ||| ||| | || |||||||| Sbjct: 18665 ctaaatataagtctttttaaaaatttcactagaagtctacatac 18708 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 125 aaaagactcatatttaggaacggaggaagta 155 |||||||| ||||||||||||||||| |||| Sbjct: 91814 aaaagacttatatttaggaacggagggagta 91844 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtcttt 35 ||||| ||||||||||||||||||||| Sbjct: 85238 tcccttcattcctaaatataagtcttt 85264 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 ttcctaaatataagtcttttta 38 |||||||||||||||||||||| Sbjct: 91692 ttcctaaatataagtcttttta 91713 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 aaaaagactcatatttaggaacgg 147 ||||||||| |||||||||||||| Sbjct: 91712 aaaaagacttatatttaggaacgg 91689 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ttcctaaatataagtctttt 36 |||||||||||||||||||| Sbjct: 85386 ttcctaaatataagtctttt 85367 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 62 acatactttagagtgtacattcgttcattttgtttcgaatgtag 105 ||||||||||||||||| ||| |||||||| |||| |||||| Sbjct: 85305 acatactttagagtgtagatttactcattttgcttcgtatgtag 85348
>emb|AJ459252.1|TAE459252 Triticum aestivum TAA1b gene for fatty acyl coA reductase Length = 4308 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Minus Query: 3 atctaatccctccattcctaaatataagtcttttta 38 ||||| ||||||| ||||||||||||||| |||||| Sbjct: 1137 atctactccctccgttcctaaatataagttttttta 1102 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 124 aaaaagactcatatttaggaacggaggaagta 155 ||||| ||| ||||||||||||||||| |||| Sbjct: 1103 aaaaaaacttatatttaggaacggagggagta 1134 Score = 40.1 bits (20), Expect = 7.0 Identities = 35/39 (89%), Gaps = 2/39 (5%) Strand = Plus / Minus Query: 117 aatcttcaaaaagactcatatttaggaacggaggaagta 155 |||||| |||||||| ||||||||||||||||| |||| Sbjct: 1008 aatctttaaaaagac--atatttaggaacggagggagta 972
>gb|BC081709.1| Rattus norvegicus eukaryotic translation initiation factor 2B, subunit 1 alpha, mRNA (cDNA clone MGC:93113 IMAGE:7135576), complete cds Length = 1502 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Minus Query: 400 aggtacagttggatgagctcatcgctcacaacggatggtgtca 442 |||||||| | ||||||||| ||||| ||| |||||||||||| Sbjct: 959 aggtacagcttgatgagctcgtcgcttacagcggatggtgtca 917
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 114 tgaaatcttcaaaaagactcatatttaggaacgga 148 |||||||| ||||||||| ||||||||||||||| Sbjct: 260199 tgaaatctctaaaaagacttatatttaggaacgga 260165 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 ttcctaaatataagtcttttta 38 |||||||||||||||||||||| Sbjct: 260169 ttcctaaatataagtcttttta 260190
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12 (WM1.12) genes, complete cds; transposons Ophelia2, Angela3s, and XJ3, complete sequence; LRR protein WM1.3 (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1, Jody, Angela, and XJ and Stowaway MITE, complete sequence; LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1) genes, complete cds; transposons XJ, XA, Angela, and Fred and WM1.11 gene, complete sequence; RPM1-like sequence and LRR protein WM1.10 (WM1.10) genes, complete cds; and transposon XJ, complete sequence Length = 198649 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Minus Query: 114 tgaaatcttcaaaaagactcatatttaggaacggaggaagtac 156 |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 69994 tgaaatctctaaaaagacaaatatttaggaacggagggagtac 69952
>gb|DQ386610.1| Hordeum vulgare subsp. vulgare protein kinase ABC1063 gene, complete cds Length = 7813 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtcttt 35 ||||||| ||||||||||||||||||| Sbjct: 2352 tccctccgttcctaaatataagtcttt 2326 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 126 aaagactcatatttaggaacggaggaagta 155 ||||||| ||||||||||||||||| |||| Sbjct: 2326 aaagacttatatttaggaacggagggagta 2355
>ref|NM_172029.1| Rattus norvegicus eukaryotic translation initiation factor 2B, subunit 1 alpha (Eif2b1), mRNA Length = 1494 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Minus Query: 400 aggtacagttggatgagctcatcgctcacaacggatggtgtca 442 |||||||| | ||||||||| ||||| ||| |||||||||||| Sbjct: 978 aggtacagcttgatgagctcgtcgcttacagcggatggtgtca 936
>gb|AF234163.1|AF234163 Hordeum vulgare starch synthase I (SSI) gene, complete cds Length = 8387 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 126 aaagactcatatttaggaacggaggaagtac 156 ||||||| ||||||||||||||||| ||||| Sbjct: 387 aaagacttatatttaggaacggagggagtac 417 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtcttt 35 ||||||| ||||||||||||||||||| Sbjct: 413 tccctccgttcctaaatataagtcttt 387 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtctttt 36 ||||||| || ||||||||||||||||| Sbjct: 254 tccctccgtttctaaatataagtctttt 281
>emb|X81368.1|TAAWJL175 T.aestivumn (subclone pAWJL175) AWJL175 gene Length = 2374 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Minus Query: 114 tgaaatcttcaaaaagactcatatttaggaacggaggaagtac 156 |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 2281 tgaaatctctaaaaagacaaatatttaggaacggagggagtac 2239
>gb|U05821.1|RNU05821 Rattus norvegicus translation initiation factor eIF-2B alpha-subunit (eIF-2a) mRNA, complete cds Length = 1494 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Minus Query: 400 aggtacagttggatgagctcatcgctcacaacggatggtgtca 442 |||||||| | ||||||||| ||||| ||| |||||||||||| Sbjct: 978 aggtacagcttgatgagctcgtcgcttacagcggatggtgtca 936
>gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransferase (HvCOMT) gene, complete cds Length = 5238 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 125 aaaagactcatatttaggaacggaggaagta 155 ||||||| |||||||||||||||||||||| Sbjct: 4098 aaaagacaaatatttaggaacggaggaagta 4128
>gb|L41679.1|RATEIF2G Rattus norvegicus GTP-exchange protein (eIF-2Balpha) gene, exons Length = 13872 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Minus Query: 400 aggtacagttggatgagctcatcgctcacaacggatggtgtca 442 |||||||| | ||||||||| ||||| ||| |||||||||||| Sbjct: 13122 aggtacagcttgatgagctcgtcgcttacagcggatggtgtca 13080
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataag 30 |||||||||||||||||||||| Sbjct: 30705 tccctccattcctaaatataag 30726
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 13 tccattcctaaatataagtcttttta 38 ||||| |||||||||||||||||||| Sbjct: 8567 tccatccctaaatataagtcttttta 8592
>gb|DQ469712.1| Hordeum vulgare subsp. vulgare serine/threonine kinase-like protein ABC1036 gene, complete cds Length = 29663 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 13 tccattcctaaatataagtcttttta 38 ||||||||||||| |||||||||||| Sbjct: 17243 tccattcctaaatgtaagtcttttta 17218
>emb|CR626934.1| Triticum aestivum Length = 94398 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 ttcctaaatataagtcttttta 38 |||||||||||||||||||||| Sbjct: 49923 ttcctaaatataagtcttttta 49944 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 124 aaaaagactcatatttaggaacggaggaagtac 156 ||||||||| |||||||||||| |||| ||||| Sbjct: 49943 aaaaagacttatatttaggaacagagggagtac 49911
>gb|AC123955.5| Mus musculus BAC clone RP23-274C16 from 1, complete sequence Length = 189764 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 agtctttttaaaagttttactt 50 |||||||||||||||||||||| Sbjct: 177814 agtctttttaaaagttttactt 177835
>gb|AC136138.30| Medicago truncatula clone mth2-8f9, complete sequence Length = 128267 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 134 atatttaggaacggaggaagta 155 |||||||||||||||||||||| Sbjct: 80028 atatttaggaacggaggaagta 80049
>gb|AF460219.1| Hordeum vulgare subsp. vulgare nuclear transcription factor SLN1 gene, complete cds Length = 4098 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 134 atatttaggaacggaggaagta 155 |||||||||||||||||||||| Sbjct: 842 atatttaggaacggaggaagta 863 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 3 atctaatccctccattcctaaatataag 30 ||||| ||||||| |||||||||||||| Sbjct: 700 atctactccctccgttcctaaatataag 727
>gb|AY972619.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG098 cyclic nucleotide-gated ion channel 4 (Nec1) gene, complete cds Length = 9090 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtcttttta 38 ||||||| |||||||||||||| ||||||| Sbjct: 343 tccctccgttcctaaatataagacttttta 314 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 124 aaaaagactcatatttaggaacggaggaagta 155 |||||| || ||||||||||||||||| |||| Sbjct: 315 aaaaagtcttatatttaggaacggagggagta 346
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtcttttta 38 ||||||| || ||||||||||||||||||| Sbjct: 30277 tccctccgtttctaaatataagtcttttta 30306 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 4 tctaatccctccattcctaaatataagtctttt 36 |||| ||||||| || ||||||||||||||||| Sbjct: 143733 tctactccctccgttactaaatataagtctttt 143701 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtctttt 36 ||||||| | |||||||||||||||||| Sbjct: 197495 tccctccgtccctaaatataagtctttt 197522 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 62 acatactttagagtgtacattcgttcattttgtttcgaatgtag 105 ||||| ||||||||||| |||| |||||||||| || |||||| Sbjct: 30344 acatattttagagtgtatattcaatcattttgttccgtatgtag 30387
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataag 30 |||||||||||||||||||||| Sbjct: 11484289 tccctccattcctaaatataag 11484268 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 134 atatttaggaacggaggaagta 155 |||||||||||||||||||||| Sbjct: 7987664 atatttaggaacggaggaagta 7987643
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtcttttta 38 ||||||||||||||| ||||||| |||||| Sbjct: 5395543 tccctccattcctaattataagtattttta 5395514
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 134 atatttaggaacggaggaagta 155 |||||||||||||||||||||| Sbjct: 19275792 atatttaggaacggaggaagta 19275771 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 tttaggaacggaggaagtac 156 |||||||||||||||||||| Sbjct: 23176608 tttaggaacggaggaagtac 23176589 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 7 aatccctccattcctaaatataagtcttttta 38 |||||||||||||| |||| ||||| |||||| Sbjct: 8415380 aatccctccattccaaaatgtaagtgttttta 8415411
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataag 30 |||||||||||||||||||||| Sbjct: 14972542 tccctccattcctaaatataag 14972563 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 134 atatttaggaacggaggaagta 155 |||||||||||||||||||||| Sbjct: 13969006 atatttaggaacggaggaagta 13968985 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtc 32 |||||||||||| ||||||||||| Sbjct: 32067319 tccctccattccaaaatataagtc 32067296 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 3 atctaatccctccattcctaaatataag 30 ||||| |||||||||||| ||||||||| Sbjct: 24510365 atctactccctccattccaaaatataag 24510338
>dbj|AP008247.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0784G04 Length = 157458 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataag 30 |||||||||||||||||||||| Sbjct: 7461 tccctccattcctaaatataag 7482
>dbj|AP008246.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1642C07 Length = 206004 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataag 30 |||||||||||||||||||||| Sbjct: 193388 tccctccattcctaaatataag 193409
>gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein (ABC1037) gene, complete cds Length = 25080 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtcttttta 38 ||||||| ||||||||||||||||||||| Sbjct: 22017 tccctccgatcctaaatataagtcttttta 21988 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 aatctaatccctccattcctaaatataag 30 |||||| ||||||| |||||||||||||| Sbjct: 5362 aatctactccctccgttcctaaatataag 5390 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 4 tctaatccctccattcctaaatataagtcttt 35 |||| |||||| ||||||||||||||||||| Sbjct: 21855 tctactccctctgttcctaaatataagtcttt 21886
>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1034_C08 Length = 154441 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataag 30 |||||||||||||||||||||| Sbjct: 38423 tccctccattcctaaatataag 38402
>dbj|AP004559.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0461A06 Length = 136384 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 134 atatttaggaacggaggaagta 155 |||||||||||||||||||||| Sbjct: 59834 atatttaggaacggaggaagta 59813
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 13 tccattcctaaatataagtcttttta 38 ||||| |||||||||||||||||||| Sbjct: 17175 tccatccctaaatataagtcttttta 17200
>dbj|AP003856.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0697D09 Length = 158479 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataag 30 |||||||||||||||||||||| Sbjct: 157368 tccctccattcctaaatataag 157389
>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1051E10 Length = 207782 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 134 atatttaggaacggaggaagta 155 |||||||||||||||||||||| Sbjct: 129308 atatttaggaacggaggaagta 129287
>dbj|AP003258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0463A02 Length = 151041 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 134 atatttaggaacggaggaagta 155 |||||||||||||||||||||| Sbjct: 44751 atatttaggaacggaggaagta 44730
>dbj|AP004754.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529B09 Length = 138188 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtcttttta 38 ||||||||||||||| ||||||| |||||| Sbjct: 26477 tccctccattcctaattataagtattttta 26448
>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0458B05 Length = 144917 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 134 atatttaggaacggaggaagta 155 |||||||||||||||||||||| Sbjct: 43590 atatttaggaacggaggaagta 43569
>dbj|AP005097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1114E07 Length = 135511 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataag 30 |||||||||||||||||||||| Sbjct: 98278 tccctccattcctaaatataag 98257
>emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb0071I17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159056 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 5 ctaatccctccattcctaaatataag 30 ||||||||||||||| |||||||||| Sbjct: 34390 ctaatccctccattcataaatataag 34365
>emb|AL731876.3|CNS08C8G Oryza sativa chromosome 12, . BAC OJ1194_E11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 119388 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 134 atatttaggaacggaggaagtacgta 159 ||||||||| |||||||||||||||| Sbjct: 62643 atatttagggacggaggaagtacgta 62618
>gb|AC132393.4| Mus musculus BAC clone RP23-386K20 from 1, complete sequence Length = 220050 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 29 agtctttttaaaagttttactt 50 |||||||||||||||||||||| Sbjct: 188842 agtctttttaaaagttttactt 188821
>dbj|AP006146.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT34M22, TM0282, complete sequence Length = 107979 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 134 atatttaggaacggaggaagta 155 |||||||||||||||||||||| Sbjct: 62490 atatttaggaacggaggaagta 62469
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 134 atatttaggaacggaggaagtacgt 158 |||||||| |||||||||||||||| Sbjct: 27983962 atatttagaaacggaggaagtacgt 27983986 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtctttttaaaa 41 |||||||||||| |||||||| | ||||||||| Sbjct: 21892938 tccctccattccaaaatataaatatttttaaaa 21892906 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 6 taatccctccattcctaaatataag 30 ||||| ||||||||||||||||||| Sbjct: 2377416 taatctctccattcctaaatataag 2377440 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctccattcctaaatata 28 |||||||||||||||||||| Sbjct: 33201419 tccctccattcctaaatata 33201438 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtc 32 |||||||||||| ||||||||||| Sbjct: 32034226 tccctccattccaaaatataagtc 32034249 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtc 32 |||||||||||| ||||||||||| Sbjct: 24715345 tccctccattccaaaatataagtc 24715368 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtc 32 |||||||||||| ||||||||||| Sbjct: 10256339 tccctccattccaaaatataagtc 10256362 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 aacggaggaagtacgtagta 162 |||||||||||||||||||| Sbjct: 7749744 aacggaggaagtacgtagta 7749725
>gb|AC005161.1| Homo sapiens BAC clone CTB-17K18 from 7, complete sequence Length = 95742 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 taaatataagtctttttaaaa 41 ||||||||||||||||||||| Sbjct: 29979 taaatataagtctttttaaaa 29959
>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete sequence Length = 133889 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 134 atatttaggaacggaggaagtacgt 158 |||||||| |||||||||||||||| Sbjct: 41064 atatttagaaacggaggaagtacgt 41040
>emb|CR974571.9| Mouse DNA sequence from clone RP23-145P19 on chromosome 12, complete sequence Length = 219782 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 ttttagagaattcttcaagacattt 291 |||||||||||||||||| |||||| Sbjct: 131707 ttttagagaattcttcaatacattt 131731
>gb|AC183502.5| Medicago truncatula clone mth2-75g17, complete sequence Length = 121928 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 409 tggatgagctcatcgctcacaacggatggtgtcagaacacc 449 |||||||||||||| || ||||| ||||| || |||||||| Sbjct: 80779 tggatgagctcatcactaacaactgatggagtaagaacacc 80819
>emb|CR536531.1| Homo sapiens full open reading frame cDNA clone RZPDo834H0220D for gene LPXN, leupaxin; complete cds, incl. stopcodon Length = 1161 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 405 cagttggatgagctcatcgctcaca 429 ||||||||||||||||| ||||||| Sbjct: 274 cagttggatgagctcatggctcaca 298
>gb|AF022725.1|AF022725 Hordeum vulgare limit dextrinase (HvLD99) gene, complete cds Length = 12034 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 124 aaaaagactcatatttaggaacggaggaagtac 156 ||||||||| |||||||||||||||| ||||| Sbjct: 3689 aaaaagacttgtatttaggaacggagggagtac 3721
>gb|AC122149.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083D24, complete sequence Length = 150503 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 6 taatccctccattcctaaatataag 30 ||||| ||||||||||||||||||| Sbjct: 94258 taatctctccattcctaaatataag 94282
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 tatttaggaacggaggaagta 155 ||||||||||||||||||||| Sbjct: 6768789 tatttaggaacggaggaagta 6768809 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 gaggaagtacgtagtaacta 166 |||||||||||||||||||| Sbjct: 21083386 gaggaagtacgtagtaacta 21083405 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctccattcctaaatata 28 |||||||||||||||||||| Sbjct: 20726272 tccctccattcctaaatata 20726291
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 134 atatttaggaacggaggaagtacgt 158 |||||||| |||||||||||||||| Sbjct: 28075286 atatttagaaacggaggaagtacgt 28075310 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtctttttaaaa 41 |||||||||||| |||||||| | ||||||||| Sbjct: 21885967 tccctccattccaaaatataaatatttttaaaa 21885935 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 6 taatccctccattcctaaatataag 30 ||||| ||||||||||||||||||| Sbjct: 2377526 taatctctccattcctaaatataag 2377550 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctccattcctaaatata 28 |||||||||||||||||||| Sbjct: 33291929 tccctccattcctaaatata 33291948 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtc 32 |||||||||||| ||||||||||| Sbjct: 32124738 tccctccattccaaaatataagtc 32124761 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtc 32 |||||||||||| ||||||||||| Sbjct: 24632175 tccctccattccaaaatataagtc 24632198 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtc 32 |||||||||||| ||||||||||| Sbjct: 10254440 tccctccattccaaaatataagtc 10254463 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 aacggaggaagtacgtagta 162 |||||||||||||||||||| Sbjct: 7747579 aacggaggaagtacgtagta 7747560
>gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genomic sequence, complete sequence Length = 127210 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtctttttaaaa 41 |||||||||||| |||||||| | ||||||||| Sbjct: 116078 tccctccattccaaaatataaatatttttaaaa 116110
>dbj|AP006464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1054C11 Length = 141529 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 tatttaggaacggaggaagta 155 ||||||||||||||||||||| Sbjct: 60126 tatttaggaacggaggaagta 60146
>dbj|AB073166.1| Arabidopsis thaliana DNA, chromosome 4 centromere region, BAC clone:F15N16 Length = 123460 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 taagtctttttaaaagtttta 47 ||||||||||||||||||||| Sbjct: 79301 taagtctttttaaaagtttta 79321
>dbj|AP006536.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT05B16, TM0545, complete sequence Length = 66136 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 tatttaggaacggaggaagta 155 ||||||||||||||||||||| Sbjct: 4624 tatttaggaacggaggaagta 4604
>dbj|AP004469.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT15D01, TM0004a, complete sequence Length = 92631 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 tatttaggaacggaggaagta 155 ||||||||||||||||||||| Sbjct: 13124 tatttaggaacggaggaagta 13144
>gb|M62740.1|BLYGLB2 Hordeum vulgare 1,3-1,4-beta-D glucan 4-glucanohydrolase (Glb 2) gene, intron 1 Length = 5159 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Minus Query: 86 tcattttgtttcgaatgtagccccctaatgaaatcttcaaaaagactcatatttaggaac 145 |||||||| |||| |||||| | ||||||||||||| ||||| || |||||||| || Sbjct: 1268 tcattttgcttcgtatgtagtctcctaatgaaatctctaaaaaaccttatatttagaaaa 1209 Query: 146 ggagg 150 ||||| Sbjct: 1208 ggagg 1204
>gb|AC140984.4| Mus musculus BAC clone RP23-129D21 from chromosome 3, complete sequence Length = 204109 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 taagtctttttaaaagtttt 46 |||||||||||||||||||| Sbjct: 90734 taagtctttttaaaagtttt 90753
>gb|AC151770.1| Ornithorhynchus anatinus chromosome UNK clone OABb-325A1, complete sequence Length = 114581 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 tttcagcagcggggagaaga 308 |||||||||||||||||||| Sbjct: 23825 tttcagcagcggggagaaga 23806
>gb|AC135599.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0045P14, complete sequence Length = 121894 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 3 atctaatccctccattcctaaatataag 30 ||||| |||||||||||| ||||||||| Sbjct: 41209 atctactccctccattccaaaatataag 41182
>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete sequence Length = 141691 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtc 32 |||||||||||| ||||||||||| Sbjct: 90892 tccctccattccaaaatataagtc 90915
>gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1024A10, complete sequence Length = 157609 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 atatttaggaacggaggaagtacg 157 ||||||||| |||||||||||||| Sbjct: 22900 atatttagggacggaggaagtacg 22923
>ref|XM_458245.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C14047g) partial mRNA Length = 2853 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 tgaaatcttcaaaaagactc 133 |||||||||||||||||||| Sbjct: 1659 tgaaatcttcaaaaagactc 1678
>gb|BC019035.2| Homo sapiens leupaxin, mRNA (cDNA clone MGC:20667 IMAGE:4575069), complete cds Length = 1843 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 cagttggatgagctcatcgctcac 428 ||||||||||||||||| |||||| Sbjct: 341 cagttggatgagctcatggctcac 364
>gb|AC132488.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0522C01, complete sequence Length = 136120 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 gaatctaatccctccattcctaaa 24 |||| ||||||||||||||||||| Sbjct: 105684 gaatgtaatccctccattcctaaa 105661
>gb|BC007490.1| Homo sapiens leupaxin, mRNA (cDNA clone IMAGE:3831258), partial cds Length = 2125 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 cagttggatgagctcatcgctcac 428 ||||||||||||||||| |||||| Sbjct: 347 cagttggatgagctcatggctcac 370
>emb|BX936425.7| Zebrafish DNA sequence from clone CH211-39L24 in linkage group 17, complete sequence Length = 173763 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 gtctttttaaaagttttact 49 |||||||||||||||||||| Sbjct: 151856 gtctttttaaaagttttact 151875
>gb|AC122182.4| Mus musculus BAC clone RP23-12G9 from 1, complete sequence Length = 197197 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 tctttttaaaagttttactt 50 |||||||||||||||||||| Sbjct: 107127 tctttttaaaagttttactt 107146
>gb|AC122260.3| Mus musculus BAC clone RP23-185M15 from 6, complete sequence Length = 203877 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 tgactccagaacactaggat 239 |||||||||||||||||||| Sbjct: 133932 tgactccagaacactaggat 133951
>gb|AC137693.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OJ1111_B01, complete sequence Length = 136068 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 124 aaaaagactcatatttaggaacggaggaagta 155 ||||| ||| |||||| ||||||||||||||| Sbjct: 84222 aaaaatacttatattttggaacggaggaagta 84191
>gb|AC023248.20| Mus musculus chromosome 7, clone RP23-124B2, complete sequence Length = 211123 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 tctttttaaaagttttactt 50 |||||||||||||||||||| Sbjct: 168952 tctttttaaaagttttactt 168933
>gb|AC102317.7| Mus musculus chromosome 18, clone RP24-444M6, complete sequence Length = 194567 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 cagaacaccaaggtcagtcaaaag 464 ||||||||||||||||||| |||| Sbjct: 48205 cagaacaccaaggtcagtctaaag 48182
>gb|AC143341.8| Medicago truncatula clone mth2-7a11, complete sequence Length = 111446 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 aacggaggaagtacgtagta 162 |||||||||||||||||||| Sbjct: 20977 aacggaggaagtacgtagta 20996
>gb|AC152406.8| Medicago truncatula clone mth2-71o20, complete sequence Length = 114919 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 134 atatttaggaacggaggaagtacgtagt 161 |||||||| |||||||||||||||||| Sbjct: 74973 atatttagatacggaggaagtacgtagt 74946
>ref|NM_004811.1| Homo sapiens leupaxin (LPXN), mRNA Length = 1875 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 cagttggatgagctcatcgctcac 428 ||||||||||||||||| |||||| Sbjct: 367 cagttggatgagctcatggctcac 390
>gb|AC165175.2| Zea mays clone ZMMBBb-136N21, complete sequence Length = 129274 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtctttttaaa 40 |||||||||||| |||||||| || ||||||| Sbjct: 39077 tccctccattccaaaatataattcgttttaaa 39046
>emb|AL138774.9| Human DNA sequence from clone RP4-780I11 on chromosome 10, complete sequence Length = 73916 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 tcccctcacctaatgtttta 271 |||||||||||||||||||| Sbjct: 36334 tcccctcacctaatgtttta 36353
>emb|X58564.1|HVPRP1A H.vulgare mRNA for a pathogenesis-related protein (Hv-1a) Length = 809 Score = 40.1 bits (20), Expect = 7.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 64 atactttagagtgtacattcgttcattttgtttcgaatgt 103 |||||||||||| ||||||| | ||||||||||| |||| Sbjct: 763 atactttagagtatacattcacttattttgtttcgtatgt 724
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii Length = 1592360 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 tgaaatcttcaaaaagactc 133 |||||||||||||||||||| Sbjct: 1153829 tgaaatcttcaaaaagactc 1153810
>emb|AL606444.3|OSJN00019 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L09, complete sequence Length = 159502 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctccattcctaaatata 28 |||||||||||||||||||| Sbjct: 57469 tccctccattcctaaatata 57488
>dbj|AP001295.1| Mus musculus genomic DNA, chromosome 7, clone:B96, complete sequence Length = 191373 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 tctttttaaaagttttactt 50 |||||||||||||||||||| Sbjct: 41788 tctttttaaaagttttactt 41769
>emb|CR612739.1| full-length cDNA clone CS0DG007YG12 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1783 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 cagttggatgagctcatcgctcac 428 ||||||||||||||||| |||||| Sbjct: 343 cagttggatgagctcatggctcac 366
>emb|CR591836.1| full-length cDNA clone CS0DH004YG07 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1791 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 cagttggatgagctcatcgctcac 428 ||||||||||||||||| |||||| Sbjct: 343 cagttggatgagctcatggctcac 366
>emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OSJNBa0007L18 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183327 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtc 32 |||||||||||| ||||||||||| Sbjct: 10864 tccctccattccaaaatataagtc 10887
>gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 genomic sequence, complete sequence Length = 144306 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtc 32 |||||||||||| ||||||||||| Sbjct: 126178 tccctccattccaaaatataagtc 126201
>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete sequence Length = 178158 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtc 32 |||||||||||| ||||||||||| Sbjct: 35351 tccctccattccaaaatataagtc 35374
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence Length = 190469 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 62 acatactttagagtgtacattcgttcattttgtttcgaatgtag 105 ||||| ||||||||||| |||| |||||||||| || |||||| Sbjct: 173011 acataatttagagtgtagattcactcattttgttccgtatgtag 172968
>gb|AY972629.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG095 cyclic nucleotide-gated ion channel 1 (CNGC1) gene, partial cds Length = 5200 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ttcctaaatataagtctttt 36 |||||||||||||||||||| Sbjct: 2778 ttcctaaatataagtctttt 2797
>gb|AC109644.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0459F09, complete sequence Length = 143533 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 124 aaaaagactcatatttaggaacggaggaagta 155 ||||| ||| |||||| ||||||||||||||| Sbjct: 29190 aaaaatacttatattttggaacggaggaagta 29159
>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045E22, from chromosome 3, complete sequence Length = 160920 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtc 32 |||||||||||| ||||||||||| Sbjct: 117752 tccctccattccaaaatataagtc 117775
>gb|AC144559.1| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0459F09, complete sequence Length = 143533 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 124 aaaaagactcatatttaggaacggaggaagta 155 ||||| ||| |||||| ||||||||||||||| Sbjct: 29190 aaaaatacttatattttggaacggaggaagta 29159
>dbj|AK081599.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130049E20 product:unclassifiable, full insert sequence Length = 1949 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 cagaacaccaaggtcagtcaaaag 464 ||||||||||||||||||| |||| Sbjct: 155 cagaacaccaaggtcagtctaaag 132
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctccattcctaaatata 28 |||||||||||||||||||| Sbjct: 32287886 tccctccattcctaaatata 32287905 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 agtaagcgaacactgcaaat 185 |||||||||||||||||||| Sbjct: 29821101 agtaagcgaacactgcaaat 29821082
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 124 aaaaagactcatatttaggaacggaggaagta 155 ||||| ||| |||||| ||||||||||||||| Sbjct: 20407017 aaaaatacttatattttggaacggaggaagta 20407048 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 atatttaggaacggaggaagtacg 157 ||||||||| |||||||||||||| Sbjct: 17268201 atatttagggacggaggaagtacg 17268224 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 3 atctaatccctccattcctaaatataag 30 ||||| |||||||||||| ||||||||| Sbjct: 10851689 atctactccctccattccaaaatataag 10851662
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 gaatctaatccctccattcctaaa 24 |||| ||||||||||||||||||| Sbjct: 11078394 gaatgtaatccctccattcctaaa 11078371
>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete sequence Length = 144487 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tccctccattcctaaatata 28 |||||||||||||||||||| Sbjct: 43136 tccctccattcctaaatata 43117
>dbj|AK223165.1| Homo sapiens mRNA for leupaxin variant, clone: LNG04603 Length = 1819 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 cagttggatgagctcatcgctcac 428 ||||||||||||||||| |||||| Sbjct: 358 cagttggatgagctcatggctcac 381
>gb|AC140385.3| Mus musculus BAC clone RP23-173G20 from chromosome 6, complete sequence Length = 179564 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 tgactccagaacactaggat 239 |||||||||||||||||||| Sbjct: 171344 tgactccagaacactaggat 171325
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01 Length = 176261 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtc 32 |||||||||||| ||||||||||| Sbjct: 109133 tccctccattccaaaatataagtc 109110
>gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence Length = 77136 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtctttt 36 ||||||| |||||||||||||| ||||| Sbjct: 56781 tccctccgttcctaaatataagcctttt 56808
>gb|AF250934.1|AF250934 Hordeum vulgare germin B (GerB) gene, complete cds Length = 2798 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtctttt 36 ||||||| || ||||||||||||||||| Sbjct: 392 tccctccgtttctaaatataagtctttt 419
>dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1112_E07 Length = 132055 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctccattcctaaatata 28 |||||||||||||||||||| Sbjct: 119883 tccctccattcctaaatata 119902
>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0686E09 Length = 156425 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 3 atctaatccctccattcctaaatataag 30 ||||| |||||||||||| ||||||||| Sbjct: 90749 atctactccctccattccaaaatataag 90722
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0569E11 Length = 157319 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctccattcctaaatata 28 |||||||||||||||||||| Sbjct: 1301 tccctccattcctaaatata 1320
>dbj|AP004092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1568_B05 Length = 115325 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 tttaggaacggaggaagtac 156 |||||||||||||||||||| Sbjct: 33839 tttaggaacggaggaagtac 33820
>dbj|AP005511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0011N12 Length = 158586 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 7 aatccctccattcctaaatataagtcttttta 38 |||||||||||||| |||| ||||| |||||| Sbjct: 68230 aatccctccattccaaaatgtaagtgttttta 68261
>emb|CR759797.14| Zebrafish DNA sequence from clone DKEY-87K14 in linkage group 17, complete sequence Length = 181261 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 gtctttttaaaagttttact 49 |||||||||||||||||||| Sbjct: 57613 gtctttttaaaagttttact 57594
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 taagcgaacactgcaaattt 187 |||||||||||||||||||| Sbjct: 289580 taagcgaacactgcaaattt 289599
>gb|DQ324801.1| Hordeum vulgare subsp. vulgare germin B (GerB) gene, promoter and partial cds Length = 1326 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 9 tccctccattcctaaatataagtctttt 36 ||||||| || ||||||||||||||||| Sbjct: 91 tccctccgtttctaaatataagtctttt 118
>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0478E02 Length = 140715 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 gaggaagtacgtagtaacta 166 |||||||||||||||||||| Sbjct: 104686 gaggaagtacgtagtaacta 104705
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 40.1 bits (20), Expect = 7.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 117 aatcttcaaaaagactcatatttaggaacggaggaagtac 156 ||||| ||||| | || ||||||||||||||| ||||||| Sbjct: 178018 aatctccaaaatgtcttatatttaggaacggatgaagtac 177979
>gb|AY642925.1| Hordeum vulgare BAC 124C9, complete sequence Length = 12258 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtctttt 36 ||||| ||||| |||||||||||||||| Sbjct: 3908 tcccttcattcttaaatataagtctttt 3881
>dbj|AP001872.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2009O17, complete sequences Length = 87006 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 cagttggatgagctcatcgctcac 428 ||||||||||||||||| |||||| Sbjct: 28867 cagttggatgagctcatggctcac 28844
>dbj|AP003557.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-655C2, complete sequences Length = 184280 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 cagttggatgagctcatcgctcac 428 ||||||||||||||||| |||||| Sbjct: 95391 cagttggatgagctcatggctcac 95368
>emb|BX005066.3| Zebrafish DNA sequence from clone CH211-152F23 in linkage group 3, complete sequence Length = 172909 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 aagtctttttaaaagtttta 47 |||||||||||||||||||| Sbjct: 128150 aagtctttttaaaagtttta 128169
>emb|CR846102.12| Zebrafish DNA sequence from clone DKEY-50I13 in linkage group 14, complete sequence Length = 174004 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 22 aaatataagtctttttaaaagttttact 49 |||||||| | ||||||||||||||||| Sbjct: 140640 aaatataaatgtttttaaaagttttact 140613
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 124 aaaaagactcatatttaggaacggaggaagta 155 ||||| ||| |||||| ||||||||||||||| Sbjct: 20717251 aaaaatacttatattttggaacggaggaagta 20717282 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 atatttaggaacggaggaagtacg 157 ||||||||| |||||||||||||| Sbjct: 17361846 atatttagggacggaggaagtacg 17361869 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 3 atctaatccctccattcctaaatataag 30 ||||| |||||||||||| ||||||||| Sbjct: 10930878 atctactccctccattccaaaatataag 10930851
>emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086O06, complete sequence Length = 178552 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 agtaagcgaacactgcaaat 185 |||||||||||||||||||| Sbjct: 102027 agtaagcgaacactgcaaat 102008
>gb|AF062075.1|AF062075 Homo sapiens leupaxin mRNA, complete cds Length = 1875 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 cagttggatgagctcatcgctcac 428 ||||||||||||||||| |||||| Sbjct: 367 cagttggatgagctcatggctcac 390
>gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0078P24, from chromosome 3, complete sequence Length = 146930 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 aacggaggaagtacgtagta 162 |||||||||||||||||||| Sbjct: 103050 aacggaggaagtacgtagta 103069
>emb|AJ271885.2|MMU271885 Mus musculus partial Kcnq1 gene for potassium channel protein and associated 187740 bp genomic fragment Length = 187740 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 tctttttaaaagttttactt 50 |||||||||||||||||||| Sbjct: 80346 tctttttaaaagttttactt 80327
>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460E08 Length = 170021 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 tccctccattcctaaatataagtc 32 |||||||||||| ||||||||||| Sbjct: 164046 tccctccattccaaaatataagtc 164023 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,352,078 Number of Sequences: 3902068 Number of extensions: 5352078 Number of successful extensions: 110761 Number of sequences better than 10.0: 177 Number of HSP's better than 10.0 without gapping: 202 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 107743 Number of HSP's gapped (non-prelim): 3011 length of query: 519 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 496 effective length of database: 17,143,297,704 effective search space: 8503075661184 effective search space used: 8503075661184 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)