ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart28b03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_194962.1| Oryza sativa (japonica cultivar-group) putative... 135 2e-28
2dbj|AK104537.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
3dbj|AK065882.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
4dbj|AK061577.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
5dbj|AK060781.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
6gb|AC116600.1| Oryza sativa (japonica cultivar-group) chromosome... 121 3e-24
7gb|AC098696.3| Oryza sativa (japonica cultivar-group) chromosome... 121 3e-24
8dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
9gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 121 3e-24
10ref|NM_103012.2| Arabidopsis thaliana oxidoreductase/ zinc ion b... 46 0.12
11gb|AC017118.3|AC017118 Genomic sequence for Arabidopsis thaliana... 46 0.12
12gb|AY087044.1| Arabidopsis thaliana clone 30996 mRNA, complete s... 46 0.12
13gb|AC146269.3| Pan troglodytes BAC clone RP43-29B18 from 7, comp... 42 1.9
14gb|AC003985.2| Homo sapiens PAC clone RP5-978I12 from 7, complet... 42 1.9
15emb|AL034427.4|HS702M17 Human DNA sequence from clone RP4-702M17... 42 1.9
16gb|AC069307.7| Homo sapiens BAC clone RP11-738E22 from 4, comple... 42 1.9
17gb|AF110425.1|AF110425 Aubrieta deltoidea alcohol dehydrogenase ... 42 1.9
18ref|XM_313616.2| Anopheles gambiae str. PEST ENSANGP00000003642 ... 42 1.9
19emb|AL359792.3|CNS05TF1 Human chromosome 14 DNA sequence BAC R-7... 42 1.9
20emb|AL929406.10| Mouse DNA sequence from clone RP23-332H16 on ch... 42 1.9
21emb|AL607039.25| Mouse DNA sequence from clone RP23-313J14 on ch... 42 1.9
22ref|XM_425910.1| PREDICTED: Gallus gallus similar to TR4 orphan ... 40 7.6
23gb|U13646.1| Caenorhabditis elegans cosmid ZK783, complete sequence 40 7.6
24gb|AC123686.11| Mus musculus chromosome 5, clone RP23-301L9, com... 40 7.6
25ref|XM_661505.1| Cryptosporidium hominis TU502 hypothetical prot... 40 7.6
26gb|AC087698.5| Homo sapiens chromosome 8, clone RP11-25K19, comp... 40 7.6
27gb|AC083934.3| Homo sapiens chromosome 8, clone RP11-108L23, com... 40 7.6
28ref|NM_001022374.1| Schizosaccharomyces pombe 972h- hypothetical... 40 7.6
29gb|AC073149.5| Homo sapiens BAC clone RP11-803F15 from 2, comple... 40 7.6
30emb|AL513406.1|CNS07EFT Human DNA sequence chromosome 8 of Homo ... 40 7.6
31emb|AL590606.1|SPBPB7E8 S.pombe chromosome II BAC pB7E8 40 7.6
32gb|AC118226.7| Mus musculus chromosome 5, clone RP23-372N19, com... 40 7.6
33dbj|D85134.1| Bombyx mori mRNA for Bm cdc2, complete cds 40 7.6
34dbj|AP000426.3| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 7.6 
>ref|NM_194962.1| Oryza sativa (japonica cultivar-group) putative alcohol
           dehydrogenase (OSJNAa0036D19.15), mRNA
          Length = 429

 Score =  135 bits (68), Expect = 2e-28
 Identities = 155/184 (84%)
 Strand = Plus / Minus

                                                                       
Query: 364 gttatgaagccatcaaagtttatcttaacctccccctgcatgcactggtcgacgaggagg 423
           |||||||| |||||||| ||||| |||| ||| |||||||||||||  || ||||     
Sbjct: 344 gttatgaacccatcaaaatttatgttaatctcaccctgcatgcacttctccacgatttca 285

                                                                       
Query: 424 ggaagctgcgacttgcccttgaagtcaccaaagacggatcctgtgatccgacggccgtcg 483
           || ||||| ||||| ||||||||||||||||| ||| | || ||||||||||||||||| 
Sbjct: 284 ggcagctgggactttcccttgaagtcaccaaaaacgcagccagtgatccgacggccgtca 225

                                                                       
Query: 484 aagagctccatgggatgcagcggcatcatcctgggggtcggatggatccccagcaccacg 543
           || | |||||| ||||||||||||| ||||||||| || | ||||||||||||||| |||
Sbjct: 224 aataactccattggatgcagcggcagcatcctgggcgttgcatggatccccagcacaacg 165

               
Query: 544 gtca 547
           ||||
Sbjct: 164 gtca 161
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>dbj|AK104537.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-G02, full
            insert sequence
          Length = 1323

 Score =  135 bits (68), Expect = 2e-28
 Identities = 155/184 (84%)
 Strand = Plus / Minus

                                                                        
Query: 364  gttatgaagccatcaaagtttatcttaacctccccctgcatgcactggtcgacgaggagg 423
            |||||||| |||||||| ||||| |||| ||| |||||||||||||  || ||||     
Sbjct: 1178 gttatgaacccatcaaaatttatgttaatctcaccctgcatgcacttctccacgatttca 1119

                                                                        
Query: 424  ggaagctgcgacttgcccttgaagtcaccaaagacggatcctgtgatccgacggccgtcg 483
            || ||||| ||||| ||||||||||||||||| ||| | || ||||||||||||||||| 
Sbjct: 1118 ggcagctgggactttcccttgaagtcaccaaaaacgcagccagtgatccgacggccgtca 1059

                                                                        
Query: 484  aagagctccatgggatgcagcggcatcatcctgggggtcggatggatccccagcaccacg 543
            || | |||||| ||||||||||||| ||||||||| || | ||||||||||||||| |||
Sbjct: 1058 aataactccattggatgcagcggcagcatcctgggcgttgcatggatccccagcacaacg 999

                
Query: 544  gtca 547
            ||||
Sbjct: 998  gtca 995
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>dbj|AK065882.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048H02, full
            insert sequence
          Length = 1506

 Score =  135 bits (68), Expect = 2e-28
 Identities = 155/184 (84%)
 Strand = Plus / Minus

                                                                        
Query: 364  gttatgaagccatcaaagtttatcttaacctccccctgcatgcactggtcgacgaggagg 423
            |||||||| |||||||| ||||| |||| ||| |||||||||||||  || ||||     
Sbjct: 1177 gttatgaacccatcaaaatttatgttaatctcaccctgcatgcacttctccacgatttca 1118

                                                                        
Query: 424  ggaagctgcgacttgcccttgaagtcaccaaagacggatcctgtgatccgacggccgtcg 483
            || ||||| ||||| ||||||||||||||||| ||| | || ||||||||||||||||| 
Sbjct: 1117 ggcagctgggactttcccttgaagtcaccaaaaacgcagccagtgatccgacggccgtca 1058

                                                                        
Query: 484  aagagctccatgggatgcagcggcatcatcctgggggtcggatggatccccagcaccacg 543
            || | |||||| ||||||||||||| ||||||||| || | ||||||||||||||| |||
Sbjct: 1057 aataactccattggatgcagcggcagcatcctgggcgttgcatggatccccagcacaacg 998

                
Query: 544  gtca 547
            ||||
Sbjct: 997  gtca 994
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>dbj|AK061577.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-G11, full
            insert sequence
          Length = 1323

 Score =  135 bits (68), Expect = 2e-28
 Identities = 155/184 (84%)
 Strand = Plus / Minus

                                                                        
Query: 364  gttatgaagccatcaaagtttatcttaacctccccctgcatgcactggtcgacgaggagg 423
            |||||||| |||||||| ||||| |||| ||| |||||||||||||  || ||||     
Sbjct: 1176 gttatgaacccatcaaaatttatgttaatctcaccctgcatgcacttctccacgatttca 1117

                                                                        
Query: 424  ggaagctgcgacttgcccttgaagtcaccaaagacggatcctgtgatccgacggccgtcg 483
            || ||||| ||||| ||||||||||||||||| ||| | || ||||||||||||||||| 
Sbjct: 1116 ggcagctgggacttccccttgaagtcaccaaaaacgcagccagtgatccgacggccgtca 1057

                                                                        
Query: 484  aagagctccatgggatgcagcggcatcatcctgggggtcggatggatccccagcaccacg 543
            || | |||||| ||||||||||||| ||||||||| || | ||||||||||||||| |||
Sbjct: 1056 aataactccattggatgcagcggcagcatcctgggcgttgcatggatccccagcacaacg 997

                
Query: 544  gtca 547
            ||||
Sbjct: 996  gtca 993
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>dbj|AK060781.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-C06, full
           insert sequence
          Length = 1318

 Score =  135 bits (68), Expect = 2e-28
 Identities = 155/184 (84%)
 Strand = Plus / Minus

                                                                       
Query: 364 gttatgaagccatcaaagtttatcttaacctccccctgcatgcactggtcgacgaggagg 423
           |||||||| |||||||| ||||| |||| ||| |||||||||||||  || ||||     
Sbjct: 907 gttatgaacccatcaaaatttatgttaatctcaccctgcatgcacttctccacgatttca 848

                                                                       
Query: 424 ggaagctgcgacttgcccttgaagtcaccaaagacggatcctgtgatccgacggccgtcg 483
           || ||||| ||||| ||||||||||||||||| ||| | || ||||||||||||||||| 
Sbjct: 847 ggcagctgggactttcccttgaagtcaccaaaaacgcagccagtgatccgacggccgtca 788

                                                                       
Query: 484 aagagctccatgggatgcagcggcatcatcctgggggtcggatggatccccagcaccacg 543
           || | |||||| ||||||||||||| ||||||||| || | ||||||||||||||| |||
Sbjct: 787 aataactccattggatgcagcggcagcatcctgggcgttgcatggatccccagcacaacg 728

               
Query: 544 gtca 547
           ||||
Sbjct: 727 gtca 724
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>gb|AC116600.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0036D19,
              complete sequence
          Length = 126686

 Score =  121 bits (61), Expect = 3e-24
 Identities = 106/121 (87%)
 Strand = Plus / Plus

                                                                          
Query: 427    agctgcgacttgcccttgaagtcaccaaagacggatcctgtgatccgacggccgtcgaag 486
              ||||| ||||| ||||||||||||||||| ||| | || ||||||||||||||||| || 
Sbjct: 121989 agctgggactttcccttgaagtcaccaaaaacgcagccagtgatccgacggccgtcaaat 122048

                                                                          
Query: 487    agctccatgggatgcagcggcatcatcctgggggtcggatggatccccagcaccacggtc 546
              | |||||| ||||||||||||| ||||||||| || | ||||||||||||||| ||||||
Sbjct: 122049 aactccattggatgcagcggcagcatcctgggcgttgcatggatccccagcacaacggtc 122108

               
Query: 547    a 547
              |
Sbjct: 122109 a 122109
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>gb|AC098696.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0050E08, complete sequence
          Length = 180499

 Score =  121 bits (61), Expect = 3e-24
 Identities = 106/121 (87%)
 Strand = Plus / Plus

                                                                         
Query: 427   agctgcgacttgcccttgaagtcaccaaagacggatcctgtgatccgacggccgtcgaag 486
             ||||| ||||| ||||||||||||||||| ||| | || ||||||||||||||||| || 
Sbjct: 55303 agctgggactttcccttgaagtcaccaaaaacgcagccagtgatccgacggccgtcaaat 55362

                                                                         
Query: 487   agctccatgggatgcagcggcatcatcctgggggtcggatggatccccagcaccacggtc 546
             | |||||| ||||||||||||| ||||||||| || | ||||||||||||||| ||||||
Sbjct: 55363 aactccattggatgcagcggcagcatcctgggcgttgcatggatccccagcacaacggtc 55422

              
Query: 547   a 547
             |
Sbjct: 55423 a 55423
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score =  121 bits (61), Expect = 3e-24
 Identities = 106/121 (87%)
 Strand = Plus / Plus

                                                                           
Query: 427     agctgcgacttgcccttgaagtcaccaaagacggatcctgtgatccgacggccgtcgaag 486
               ||||| ||||| ||||||||||||||||| ||| | || ||||||||||||||||| || 
Sbjct: 3773507 agctgggactttcccttgaagtcaccaaaaacgcagccagtgatccgacggccgtcaaat 3773566

                                                                           
Query: 487     agctccatgggatgcagcggcatcatcctgggggtcggatggatccccagcaccacggtc 546
               | |||||| ||||||||||||| ||||||||| || | ||||||||||||||| ||||||
Sbjct: 3773567 aactccattggatgcagcggcagcatcctgggcgttgcatggatccccagcacaacggtc 3773626

                
Query: 547     a 547
               |
Sbjct: 3773627 a 3773627
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  121 bits (61), Expect = 3e-24
 Identities = 106/121 (87%)
 Strand = Plus / Plus

                                                                           
Query: 427     agctgcgacttgcccttgaagtcaccaaagacggatcctgtgatccgacggccgtcgaag 486
               ||||| ||||| ||||||||||||||||| ||| | || ||||||||||||||||| || 
Sbjct: 3773428 agctgggactttcccttgaagtcaccaaaaacgcagccagtgatccgacggccgtcaaat 3773487

                                                                           
Query: 487     agctccatgggatgcagcggcatcatcctgggggtcggatggatccccagcaccacggtc 546
               | |||||| ||||||||||||| ||||||||| || | ||||||||||||||| ||||||
Sbjct: 3773488 aactccattggatgcagcggcagcatcctgggcgttgcatggatccccagcacaacggtc 3773547

                
Query: 547     a 547
               |
Sbjct: 3773548 a 3773548
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>ref|NM_103012.2| Arabidopsis thaliana oxidoreductase/ zinc ion binding AT1G32780 mRNA,
            complete cds
          Length = 1532

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 424  ggaagctgcgacttgcccttgaagtcaccaaagacggatcctgtgatccgacggccgtcg 483
            |||||||| || |||  ||||||| ||||||| || || || ||||| | ||||||||||
Sbjct: 1227 ggaagctgagatttgggcttgaagccaccaaacacagaaccggtgattctacggccgtcg 1168

                       
Query: 484  aagagctccat 494
            || ||||||||
Sbjct: 1167 aaaagctccat 1157
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>gb|AC017118.3|AC017118 Genomic sequence for Arabidopsis thaliana BAC F6N18 from chromosome I,
             complete sequence
          Length = 92219

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                         
Query: 424   ggaagctgcgacttgcccttgaagtcaccaaagacggatcctgtgatccgacggccgtcg 483
             |||||||| || |||  ||||||| ||||||| || || || ||||| | ||||||||||
Sbjct: 80338 ggaagctgagatttgggcttgaagccaccaaacacagaaccggtgattctacggccgtcg 80397

                        
Query: 484   aagagctccat 494
             || ||||||||
Sbjct: 80398 aaaagctccat 80408
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>gb|AY087044.1| Arabidopsis thaliana clone 30996 mRNA, complete sequence
          Length = 1529

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 424  ggaagctgcgacttgcccttgaagtcaccaaagacggatcctgtgatccgacggccgtcg 483
            |||||||| || |||  ||||||| ||||||| || || || ||||| | ||||||||||
Sbjct: 1224 ggaagctgagatttgggcttgaagccaccaaacacagaaccggtgattctacggccgtcg 1165

                       
Query: 484  aagagctccat 494
            || ||||||||
Sbjct: 1164 aaaagctccat 1154
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>gb|AC146269.3| Pan troglodytes BAC clone RP43-29B18 from 7, complete sequence
          Length = 178898

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 199    tacagtaagatggtagtaaca 219
              |||||||||||||||||||||
Sbjct: 176417 tacagtaagatggtagtaaca 176437
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>gb|AC003985.2| Homo sapiens PAC clone RP5-978I12 from 7, complete sequence
          Length = 104492

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 199    tacagtaagatggtagtaaca 219
              |||||||||||||||||||||
Sbjct: 102827 tacagtaagatggtagtaaca 102807
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>emb|AL034427.4|HS702M17 Human DNA sequence from clone RP4-702M17 on chromosome 20p12 Contains
             the 5' end of the PAK7 gene for p21(CDKN1A)-activated
             kinase 7, GSSs and a CpG island, complete sequence
          Length = 56631

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 127   aaacccaacacatgtttatga 147
             |||||||||||||||||||||
Sbjct: 25344 aaacccaacacatgtttatga 25364
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>gb|AC069307.7| Homo sapiens BAC clone RP11-738E22 from 4, complete sequence
          Length = 203474

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 164   atgaaatctaacctccagtttaaatttac 192
             |||| |||||||| |||||||||||||||
Sbjct: 58930 atgacatctaaccaccagtttaaatttac 58958
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>gb|AF110425.1|AF110425 Aubrieta deltoidea alcohol dehydrogenase gene, complete cds
          Length = 1706

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 327  gaaagcctcgttaatctccgagaatggca 355
            |||||||| ||| ||||||||||||||||
Sbjct: 1652 gaaagccttgttgatctccgagaatggca 1624
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>ref|XM_313616.2| Anopheles gambiae str. PEST ENSANGP00000003642
           (ENSANGG00000002917), partial mRNA
          Length = 1257

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 392 cctccccctgcatgcactggtcgacgagg 420
           |||| ||||||| ||||||||||||||||
Sbjct: 175 cctcgccctgcacgcactggtcgacgagg 147
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>emb|AL359792.3|CNS05TF1 Human chromosome 14 DNA sequence BAC R-794A8 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 180353

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 179    cagtttaaatttacaagatct 199
              |||||||||||||||||||||
Sbjct: 136554 cagtttaaatttacaagatct 136574
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>emb|AL929406.10| Mouse DNA sequence from clone RP23-332H16 on chromosome 4, complete
             sequence
          Length = 152909

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 184   taaatttacaagatctacagtaaga 208
             ||||||| |||||||||||||||||
Sbjct: 66776 taaatttccaagatctacagtaaga 66800
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>emb|AL607039.25| Mouse DNA sequence from clone RP23-313J14 on chromosome 11, complete
             sequence
          Length = 147376

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 180   agtttaaatttacaagatcta 200
             |||||||||||||||||||||
Sbjct: 98098 agtttaaatttacaagatcta 98078
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>ref|XM_425910.1| PREDICTED: Gallus gallus similar to TR4 orphan receptor associated
            protein TRA16; repressor for TR4 transactivation
            (LOC428350), mRNA
          Length = 2067

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 485  agagctccatgggatgcagc 504
            ||||||||||||||||||||
Sbjct: 1402 agagctccatgggatgcagc 1383
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>gb|U13646.1| Caenorhabditis elegans cosmid ZK783, complete sequence
          Length = 32986

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    ttctgataattacacaaact 31
             ||||||||||||||||||||
Sbjct: 27101 ttctgataattacacaaact 27120
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>gb|AC123686.11| Mus musculus chromosome 5, clone RP23-301L9, complete sequence
          Length = 212246

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 529   atccccagcaccacggtcaa 548
             ||||||||||||||||||||
Sbjct: 12559 atccccagcaccacggtcaa 12540
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>ref|XM_661505.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.30096)
            partial mRNA
          Length = 6789

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 153  cttcactttgaatgaaatct 172
            ||||||||||||||||||||
Sbjct: 1039 cttcactttgaatgaaatct 1020
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>gb|AC087698.5| Homo sapiens chromosome 8, clone RP11-25K19, complete sequence
          Length = 150750

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   caaagtttatcttaacctcc 396
             ||||||||||||||||||||
Sbjct: 94782 caaagtttatcttaacctcc 94763
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>gb|AC083934.3| Homo sapiens chromosome 8, clone RP11-108L23, complete sequence
          Length = 157749

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   caaagtttatcttaacctcc 396
             ||||||||||||||||||||
Sbjct: 41911 caaagtttatcttaacctcc 41892
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>ref|NM_001022374.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBPB7E8.02),
           partial mRNA
          Length = 2250

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 3   aaagatgaattctgataatt 22
           ||||||||||||||||||||
Sbjct: 815 aaagatgaattctgataatt 796
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>gb|AC073149.5| Homo sapiens BAC clone RP11-803F15 from 2, complete sequence
          Length = 99685

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 300   gagggacttgccttcctaca 319
             ||||||||||||||||||||
Sbjct: 24565 gagggacttgccttcctaca 24584
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>emb|AL513406.1|CNS07EFT Human DNA sequence chromosome 8 of Homo sapiens (human)
          Length = 204955

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 377   caaagtttatcttaacctcc 396
             ||||||||||||||||||||
Sbjct: 57440 caaagtttatcttaacctcc 57459
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>emb|AL590606.1|SPBPB7E8 S.pombe chromosome II BAC pB7E8
          Length = 14070

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 3    aaagatgaattctgataatt 22
            ||||||||||||||||||||
Sbjct: 9469 aaagatgaattctgataatt 9450
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>gb|AC118226.7| Mus musculus chromosome 5, clone RP23-372N19, complete sequence
          Length = 173599

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 529   atccccagcaccacggtcaa 548
             ||||||||||||||||||||
Sbjct: 86175 atccccagcaccacggtcaa 86156
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>dbj|D85134.1| Bombyx mori mRNA for Bm cdc2, complete cds
          Length = 1973

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 447 gtcaccaaagacggatcctg 466
           ||||||||||||||||||||
Sbjct: 367 gtcaccaaagacggatcctg 386
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>dbj|AP000426.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1107E3
          Length = 239116

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 494    tgggatgcagcggcatcatc 513
              ||||||||||||||||||||
Sbjct: 142323 tgggatgcagcggcatcatc 142304


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,242,271
Number of Sequences: 3902068
Number of extensions: 4242271
Number of successful extensions: 87511
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87433
Number of HSP's gapped (non-prelim): 78
length of query: 559
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 536
effective length of database: 17,143,297,704
effective search space: 9188807569344
effective search space used: 9188807569344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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