>gb|AY108507.1| Zea mays PCO092437 mRNA sequence
          Length = 1277

 Score =  143 bits (72), Expect = 6e-31
 Identities = 93/100 (93%)
 Strand = Plus / Minus

                                                                       
Query: 366 cgccccagatctccgggatggctcgccggaggccgccgatggtctccagcgcgtagtccg 425
           |||||||||||||||||||||| ||||||||  |||||||| |||||| |||||||||||
Sbjct: 816 cgccccagatctccgggatggcccgccggagcgcgccgatgctctccaccgcgtagtccg 757

                                                   
Query: 426 cctccttgctcctcgccctcttgccaaccagggctgtgcg 465
           | |||||||||||||||||||||||||||||||| |||||
Sbjct: 756 cttccttgctcctcgccctcttgccaaccagggcggtgcg 717

>ref|XM_469419.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1219

 Score =  133 bits (67), Expect = 6e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                       
Query: 363 cgccgccccagatctccgggatggctcgccggaggccgccgatggtctccagcgcgtagt 422
           |||||||||| ||||||||||||||||||||||||| ||||||| |||| || |||||||
Sbjct: 808 cgccgccccaaatctccgggatggctcgccggaggctgccgatgctctcaagagcgtagt 749

                                              
Query: 423 ccgcctccttgctcctcgccctcttgccaaccagg 457
           | ||||||||||||||| |||||||||||||||||
Sbjct: 748 cggcctccttgctcctcaccctcttgccaaccagg 714

>dbj|AK099563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034L20, full
           insert sequence
          Length = 1147

 Score =  133 bits (67), Expect = 6e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                       
Query: 363 cgccgccccagatctccgggatggctcgccggaggccgccgatggtctccagcgcgtagt 422
           |||||||||| ||||||||||||||||||||||||| ||||||| |||| || |||||||
Sbjct: 807 cgccgccccaaatctccgggatggctcgccggaggctgccgatgctctcaagagcgtagt 748

                                              
Query: 423 ccgcctccttgctcctcgccctcttgccaaccagg 457
           | ||||||||||||||| |||||||||||||||||
Sbjct: 747 cggcctccttgctcctcaccctcttgccaaccagg 713

>dbj|AK061982.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-A11, full
           insert sequence
          Length = 1144

 Score =  133 bits (67), Expect = 6e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                       
Query: 363 cgccgccccagatctccgggatggctcgccggaggccgccgatggtctccagcgcgtagt 422
           |||||||||| ||||||||||||||||||||||||| ||||||| |||| || |||||||
Sbjct: 808 cgccgccccaaatctccgggatggctcgccggaggctgccgatgctctcaagagcgtagt 749

                                              
Query: 423 ccgcctccttgctcctcgccctcttgccaaccagg 457
           | ||||||||||||||| |||||||||||||||||
Sbjct: 748 cggcctccttgctcctcaccctcttgccaaccagg 714

>dbj|AK061528.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-D11, full
           insert sequence
          Length = 1112

 Score =  133 bits (67), Expect = 6e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                       
Query: 363 cgccgccccagatctccgggatggctcgccggaggccgccgatggtctccagcgcgtagt 422
           |||||||||| ||||||||||||||||||||||||| ||||||| |||| || |||||||
Sbjct: 791 cgccgccccaaatctccgggatggctcgccggaggctgccgatgctctcaagagcgtagt 732

                                              
Query: 423 ccgcctccttgctcctcgccctcttgccaaccagg 457
           | ||||||||||||||| |||||||||||||||||
Sbjct: 731 cggcctccttgctcctcaccctcttgccaaccagg 697

>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score =  127 bits (64), Expect = 3e-26
 Identities = 85/92 (92%)
 Strand = Plus / Minus

                                                                         
Query: 363   cgccgccccagatctccgggatggctcgccggaggccgccgatggtctccagcgcgtagt 422
             |||||||||| ||||||||||||||||||||||||| ||||||| |||| || |||||||
Sbjct: 98685 cgccgccccaaatctccgggatggctcgccggaggctgccgatgctctcaagagcgtagt 98626

                                             
Query: 423   ccgcctccttgctcctcgccctcttgccaacc 454
             | ||||||||||||||| ||||||||||||||
Sbjct: 98625 cggcctccttgctcctcaccctcttgccaacc 98594

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  127 bits (64), Expect = 3e-26
 Identities = 85/92 (92%)
 Strand = Plus / Minus

                                                                            
Query: 363      cgccgccccagatctccgggatggctcgccggaggccgccgatggtctccagcgcgtagt 422
                |||||||||| ||||||||||||||||||||||||| ||||||| |||| || |||||||
Sbjct: 27854555 cgccgccccaaatctccgggatggctcgccggaggctgccgatgctctcaagagcgtagt 27854496

                                                
Query: 423      ccgcctccttgctcctcgccctcttgccaacc 454
                | ||||||||||||||| ||||||||||||||
Sbjct: 27854495 cggcctccttgctcctcaccctcttgccaacc 27854464

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  127 bits (64), Expect = 3e-26
 Identities = 85/92 (92%)
 Strand = Plus / Minus

                                                                            
Query: 363      cgccgccccagatctccgggatggctcgccggaggccgccgatggtctccagcgcgtagt 422
                |||||||||| ||||||||||||||||||||||||| ||||||| |||| || |||||||
Sbjct: 27945879 cgccgccccaaatctccgggatggctcgccggaggctgccgatgctctcaagagcgtagt 27945820

                                                
Query: 423      ccgcctccttgctcctcgccctcttgccaacc 454
                | ||||||||||||||| ||||||||||||||
Sbjct: 27945819 cggcctccttgctcctcaccctcttgccaacc 27945788

>gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete sequence
          Length = 127914

 Score =  115 bits (58), Expect = 1e-22
 Identities = 94/106 (88%)
 Strand = Plus / Minus

                                                                         
Query: 349   ctcgccgtcggccgcgccgccccagatctccgggatggctcgccggaggccgccgatggt 408
             ||||||| ||||  || |||||||||||||||||||| | ||||||||  |||||||| |
Sbjct: 12296 ctcgccgccggcgacgacgccccagatctccgggatgacccgccggagcgcgccgatgtt 12237

                                                           
Query: 409   ctccagcgcgtagtccgcctccttgctcctcgccctcttgccaacc 454
             ||||||||||||||| || |||||||||||| ||||||||||||||
Sbjct: 12236 ctccagcgcgtagtctgcgtccttgctcctcaccctcttgccaacc 12191



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 266   gcctggatggacgtgggctgtatgacggcgtccagctcggccctcat 312
             |||||||||||||||||||| |||| || |||||| |||| ||||||
Sbjct: 12379 gcctggatggacgtgggctggatgatggagtccaggtcggacctcat 12333

>emb|X82617.1|ZMSSIP Z.mays mRNA for sugar-starvation induced protein
          Length = 1022

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 91/102 (89%), Gaps = 4/102 (3%)
 Strand = Plus / Minus

                                                                       
Query: 366 cgccccagatctccgggatggctcgccggag--gccgccgatggtctccagcgcgtagtc 423
           |||||||||||||||||||| | ||||||||  || ||||||| ||||||  | ||||||
Sbjct: 577 cgccccagatctccgggatgcc-cgccggagcggcggccgatgctctccacag-gtagtc 520

                                                     
Query: 424 cgcctccttgctcctcgccctcttgccaaccagggctgtgcg 465
           ||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 519 cgcttccttgctcctcgccctcttgccaaccagggcggtgcg 478

>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 396     ggccgccgatggtctccagcgc 417
               ||||||||||||||||||||||
Sbjct: 3635096 ggccgccgatggtctccagcgc 3635075

>gb|AE004656.1| Pseudomonas aeruginosa PAO1, section 217 of 529 of the complete genome
          Length = 13104

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 348   gctcgccgtcggccgcgccgcc 369
             ||||||||||||||||||||||
Sbjct: 12539 gctcgccgtcggccgcgccgcc 12560

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 345      gcagctcgccgtcggccgcgccgcc 369
                ||||||||||||||||| |||||||
Sbjct: 26211498 gcagctcgccgtcggcctcgccgcc 26211474

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 347    agctcgccgtcggccgcgccgcccc 371
              ||||||||||| |||||||||||||
Sbjct: 552741 agctcgccgtccgccgcgccgcccc 552717

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 345      gcagctcgccgtcggccgcgccgcc 369
                ||||||||||||||||| |||||||
Sbjct: 26139674 gcagctcgccgtcggcctcgccgcc 26139650

>emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388_B05 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 144241

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 345    gcagctcgccgtcggccgcgccgcc 369
              ||||||||||||||||| |||||||
Sbjct: 101736 gcagctcgccgtcggcctcgccgcc 101712

>gb|AC115910.6| Mus musculus, clone RP24-480O17, complete sequence
          Length = 257036

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   cataattaagcatcaggact 150
             ||||||||||||||||||||
Sbjct: 85058 cataattaagcatcaggact 85077

>emb|AL359914.14| Human DNA sequence from clone RP11-637B23 on chromosome X Contains a H3
              histone, family 3B (H3F3B) pseudogene, the BMP15 gene for
              bone morphogenetic protein 15, and a high-mobility group
              box 1 (HMGB1) pseudogene, complete sequence
          Length = 125495

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     ttattctgcctgtcagctgg 90
              ||||||||||||||||||||
Sbjct: 124807 ttattctgcctgtcagctgg 124788

>emb|AL354949.10| Human DNA sequence from clone RP11-82L20 on chromosome 1 Contains part of
              the NEGR1 gene for neuronal growth regulator 1 and a novel
              gene, complete sequence
          Length = 180569

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     tgctttgtttaatctgcttt 36
              ||||||||||||||||||||
Sbjct: 167724 tgctttgtttaatctgcttt 167743

>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 289    gacggcgtccagctcggccc 308
              ||||||||||||||||||||
Sbjct: 184961 gacggcgtccagctcggccc 184942

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 351     cgccgtcggccgcgccgccc 370
               ||||||||||||||||||||
Sbjct: 1744396 cgccgtcggccgcgccgccc 1744415

>gb|AE005780.1| Caulobacter crescentus CB15 section 106 of 359 of the complete genome
          Length = 14131

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 350   tcgccgtcggccgcgccgcc 369
             ||||||||||||||||||||
Sbjct: 13352 tcgccgtcggccgcgccgcc 13371

>gb|AC068629.35| Homo sapiens 12 BAC RP11-162A11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 191117

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 269    tggatggacgtgggctgtat 288
              ||||||||||||||||||||
Sbjct: 114411 tggatggacgtgggctgtat 114392

>gb|AC156637.2| Mus musculus BAC clone RP24-241I18 from chromosome 12, complete sequence
          Length = 156014

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    cataattaagcatcaggact 150
              ||||||||||||||||||||
Sbjct: 115193 cataattaagcatcaggact 115212

>dbj|AK043962.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length
           enriched library, clone:A830060H14
           product:unclassifiable, full insert sequence
          Length = 1586

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 131 cataattaagcatcaggact 150
           ||||||||||||||||||||
Sbjct: 681 cataattaagcatcaggact 662

>gb|AC114488.3| Homo sapiens chromosome 1 clone RP11-73M7, complete sequence
          Length = 184854

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 269    tggatggacgtgggctgtat 288
              ||||||||||||||||||||
Sbjct: 142422 tggatggacgtgggctgtat 142403

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 357     cggccgcgccgccccagatc 376
               ||||||||||||||||||||
Sbjct: 7464729 cggccgcgccgccccagatc 7464710

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 341     agctgcagctcgccgtcggccgcg 364
               |||||| |||||||||||||||||
Sbjct: 6418411 agctgctgctcgccgtcggccgcg 6418434

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 348     gctcgccgtcggccgcgccgcccc 371
               |||||||||||||| |||||||||
Sbjct: 3951642 gctcgccgtcggccccgccgcccc 3951665

>gb|AE005097.1| Halobacterium sp. NRC-1 section 128 of 170 of the complete genome
          Length = 16069

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 348  gctcgccgtcggccgcgccg 367
            ||||||||||||||||||||
Sbjct: 2522 gctcgccgtcggccgcgccg 2541

>emb|AL928621.16| Mouse DNA sequence from clone RP23-401G6 on chromosome 2, complete
              sequence
          Length = 174248

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     gctttgtttaatctgctttg 37
              ||||||||||||||||||||
Sbjct: 114203 gctttgtttaatctgctttg 114184

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 335    tggtcgagctgcagctcgccgtcg 358
              ||||||||||||||||||| ||||
Sbjct: 942469 tggtcgagctgcagctcgcggtcg 942446



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    cgccgtcggccgcgccgccc 370
              ||||||||||||||||||||
Sbjct: 612410 cgccgtcggccgcgccgccc 612429


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,520,360
Number of Sequences: 3902068
Number of extensions: 3520360
Number of successful extensions: 63458
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62539
Number of HSP's gapped (non-prelim): 918
length of query: 465
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 443
effective length of database: 17,147,199,772
effective search space: 7596209498996
effective search space used: 7596209498996
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)