ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart28a06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
2dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
3dbj|AK105239.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 1e-35
4dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
5dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
6dbj|AK070507.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
7gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome ... 62 2e-06
8dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
9gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome... 58 3e-05
10gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome... 58 3e-05
11dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
12dbj|AK061003.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
13gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 58 3e-05
14ref|XM_472069.1| Oryza sativa (japonica cultivar-group), predic... 52 0.002
15dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
16emb|AL662956.3|OSJN00159 Oryza sativa genomic DNA, chromosome 4,... 52 0.002
17ref|NM_195276.1| Oryza sativa (japonica cultivar-group) putative... 48 0.026
18gb|AC105932.6| Oryza sativa (japonica cultivar-group) chromosome... 48 0.026
19dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.026
20dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.026
21dbj|AK071840.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.026
22dbj|AK070224.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.026
23dbj|AK066828.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.026
24dbj|AK061183.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.026
25gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.026
26gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.026
27emb|AL928779.3|CNS08CC9 Oryza sativa chromosome 12, . BAC OSJNBa... 48 0.026
28emb|AL954870.3|CNS08CD9 Oryza sativa chromosome 12, . BAC OSJNBb... 48 0.026
29ref|XM_476630.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
30gb|AE014840.1| Plasmodium falciparum 3D7 chromosome 11 section 5... 42 1.6
31emb|AL713994.15| Mouse DNA sequence from clone RP23-378H5 on chr... 42 1.6
32dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
33dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
34dbj|AP004263.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
35dbj|AP003541.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
36dbj|AP003345.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
37dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
38dbj|AK109408.2| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
39gb|AC116121.8| Mus musculus chromosome 8, clone RP23-79K4, compl... 40 6.4
40gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 6.4
41ref|NM_191014.1| Oryza sativa (japonica cultivar-group), predic... 40 6.4
42ref|XM_473241.1| Oryza sativa (japonica cultivar-group), predic... 40 6.4
43gb|AC146526.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
44gb|BC034854.1| Mus musculus F-box only protein 8, mRNA (cDNA clo... 40 6.4
45ref|NM_015791.2| Mus musculus F-box only protein 8 (Fbxo8), mRNA 40 6.4
46gb|AY665713.1| Equine herpesvirus 1 strain Ab4, complete genome 40 6.4
47ref|XM_534554.2| PREDICTED: Canis familiaris similar to F-box on... 40 6.4
48emb|AM050729.1| Mycobacterium smegmatis lexA gene and ddiG-nrdR ... 40 6.4
49emb|CR936838.15| Mouse DNA sequence from clone DN-127N6 on chrom... 40 6.4
50gb|AC098720.2| Mus musculus BAC clone RP23-2N16 from 5, complete... 40 6.4
51gb|AC011284.3| Homo sapiens BAC clone CTD-2326L19 from 7, comple... 40 6.4
52gb|AC114553.6| Mus musculus chromosome 5, clone RP23-408M16, com... 40 6.4
53gb|AY464052.1| Equine herpesvirus 1 strain V592, complete genome 40 6.4
54emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4,... 40 6.4
55emb|BX571680.7| Zebrafish DNA sequence from clone DKEY-30L20 in ... 40 6.4
56emb|AJ720952.1| Gallus gallus mRNA for hypothetical protein, clo... 40 6.4
57ref|NM_001006446.1| Gallus gallus F-box protein 8 (FBXO8), mRNA 40 6.4
58emb|BX936431.7| Zebrafish DNA sequence from clone CH211-208A5 in... 40 6.4
59gb|BC103444.1| Bos taurus F-box protein 8, mRNA (cDNA clone MGC:... 40 6.4
60dbj|AK160145.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.4
61dbj|AK078111.1| Mus musculus adult male medulla oblongata cDNA, ... 40 6.4
62dbj|AK077595.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 40 6.4
63dbj|AK002538.1| Mus musculus adult male kidney cDNA, RIKEN full-... 40 6.4
64ref|NM_001015667.2| Bos taurus F-box protein 8 (FBXO8), mRNA 40 6.4
65dbj|AK012401.1| Mus musculus 11 days embryo whole body cDNA, RIK... 40 6.4
66dbj|AK019043.1| Mus musculus adult male small intestine cDNA, RI... 40 6.4
67dbj|AK029989.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.4
68dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
69gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 6.4
70dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
71dbj|AP003073.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
72ref|XM_573904.1| PREDICTED: Rattus norvegicus F-box only protein... 40 6.4
73gb|AC130403.3| Homo sapiens 12 BAC RP11-674N14 (Roswell Park Can... 40 6.4
74gb|AF176527.1| Mus musculus F-box protein FBX8 mRNA, complete cds 40 6.4
75dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 6.4
76dbj|AP004255.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
77dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
78emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 6.4
79gb|AF072715.1|AF072715 Mycoplasma mycoides capri lipoprotein A p... 40 6.4
80dbj|AK059900.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
81gb|BT020954.1| Bos taurus F-box protein 8 (FBXO8), mRNA, complet... 40 6.4
82gb|BT020782.1| Bos taurus F-box protein 8 (FBXO8), mRNA, complet... 40 6.4
83gb|BC088452.1| Rattus norvegicus F-box only protein 8, mRNA (cDN... 40 6.4
84ref|NM_001012050.1| Rattus norvegicus F-box only protein 8 (Fbxo... 40 6.4
85emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559... 40 6.4
86emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268... 40 6.4
87emb|AL671857.16| Mouse DNA sequence from clone RP23-176A21 on ch... 40 6.4 
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  159 bits (80), Expect = 1e-35
 Identities = 170/200 (85%)
 Strand = Plus / Minus

                                                                            
Query: 242      tctccggcgtcatgtggttcacccagtctccggcgacccctttcctgaagaaggcgtcgc 301
                ||||||||| |||||||||| ||||||| |||||||| || |||||||||||||||||||
Sbjct: 24792551 tctccggcgacatgtggttcgcccagtcgccggcgacgcccttcctgaagaaggcgtcgc 24792492

                                                                            
Query: 302      ggggcatggcgtggtacgcccccgacgagcccttcttgttcacctccaggcccttcatct 361
                | ||||||   | ||||| ||||| || ||||  |  ||||||||||||  |||||||| 
Sbjct: 24792491 gcggcatgctcttgtacgaccccgccgtgccccgccggttcacctccagcgccttcatcc 24792432

                                                                            
Query: 362      tctcgaagctgcacagctccaccacggcctccacggctccggcgccctcctcggcggacg 421
                ||||||||||||||| |||||| |||  | | ||||| |||||| |||||||||||| ||
Sbjct: 24792431 tctcgaagctgcacaactccacgacgctcgctacggcgccggcggcctcctcggcggccg 24792372

                                    
Query: 422      agaacggccggcccatgaac 441
                |||||||||| |||||||||
Sbjct: 24792371 agaacggccgccccatgaac 24792352



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                    
Query: 338     tgttcacctccaggcccttcatcttctcgaagctgca 374
               ||||||||||||||  |||||||| |||||| |||||
Sbjct: 2549654 tgttcacctccaggttcttcatctgctcgaaactgca 2549690



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                    
Query: 238      gccatctccggcgtcatgtggttcacccagtctccg 273
                |||||||| ||||| | |||||||||||| ||||||
Sbjct: 24848406 gccatctctggcgtgacgtggttcacccaatctccg 24848441
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>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0493C06
          Length = 158923

 Score =  159 bits (80), Expect = 1e-35
 Identities = 170/200 (85%)
 Strand = Plus / Minus

                                                                         
Query: 242   tctccggcgtcatgtggttcacccagtctccggcgacccctttcctgaagaaggcgtcgc 301
             ||||||||| |||||||||| ||||||| |||||||| || |||||||||||||||||||
Sbjct: 27002 tctccggcgacatgtggttcgcccagtcgccggcgacgcccttcctgaagaaggcgtcgc 26943

                                                                         
Query: 302   ggggcatggcgtggtacgcccccgacgagcccttcttgttcacctccaggcccttcatct 361
             | ||||||   | ||||| ||||| || ||||  |  ||||||||||||  |||||||| 
Sbjct: 26942 gcggcatgctcttgtacgaccccgccgtgccccgccggttcacctccagcgccttcatcc 26883

                                                                         
Query: 362   tctcgaagctgcacagctccaccacggcctccacggctccggcgccctcctcggcggacg 421
             ||||||||||||||| |||||| |||  | | ||||| |||||| |||||||||||| ||
Sbjct: 26882 tctcgaagctgcacaactccacgacgctcgctacggcgccggcggcctcctcggcggccg 26823

                                 
Query: 422   agaacggccggcccatgaac 441
             |||||||||| |||||||||
Sbjct: 26822 agaacggccgccccatgaac 26803



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 238   gccatctccggcgtcatgtggttcacccagtctccg 273
             |||||||| ||||| | |||||||||||| ||||||
Sbjct: 82857 gccatctctggcgtgacgtggttcacccaatctccg 82892
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>dbj|AK105239.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-B04, full
            insert sequence
          Length = 1369

 Score =  159 bits (80), Expect = 1e-35
 Identities = 170/200 (85%)
 Strand = Plus / Minus

                                                                        
Query: 242  tctccggcgtcatgtggttcacccagtctccggcgacccctttcctgaagaaggcgtcgc 301
            ||||||||| |||||||||| ||||||| |||||||| || |||||||||||||||||||
Sbjct: 1024 tctccggcgacatgtggttcgcccagtcgccggcgacgcccttcctgaagaaggcgtcgc 965

                                                                        
Query: 302  ggggcatggcgtggtacgcccccgacgagcccttcttgttcacctccaggcccttcatct 361
            | ||||||   | ||||| ||||| || ||||  |  ||||||||||||  |||||||| 
Sbjct: 964  gcggcatgctcttgtacgaccccgccgtgccccgccggttcacctccagcgccttcatcc 905

                                                                        
Query: 362  tctcgaagctgcacagctccaccacggcctccacggctccggcgccctcctcggcggacg 421
            ||||||||||||||| |||||| |||  | | ||||| |||||| |||||||||||| ||
Sbjct: 904  tctcgaagctgcacaactccacgacgctcgctacggcgccggcggcctcctcggcggccg 845

                                
Query: 422  agaacggccggcccatgaac 441
            |||||||||| |||||||||
Sbjct: 844  agaacggccgccccatgaac 825
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                                
Query: 237     cgccatctccggcgtcatgtggttcacccagtc 269
               |||||||||||||||||||||||||||||||||
Sbjct: 7945862 cgccatctccggcgtcatgtggttcacccagtc 7945830



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 438      gaactccgccagcctcctcacgtgc 462
                ||||||||||||||||| |||||||
Sbjct: 24908840 gaactccgccagcctccgcacgtgc 24908864
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>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0046H10
          Length = 155544

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                              
Query: 237   cgccatctccggcgtcatgtggttcacccagtc 269
             |||||||||||||||||||||||||||||||||
Sbjct: 53380 cgccatctccggcgtcatgtggttcacccagtc 53348
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>dbj|AK070507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054C04, full
            insert sequence
          Length = 1260

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                             
Query: 237  cgccatctccggcgtcatgtggttcacccagtc 269
            |||||||||||||||||||||||||||||||||
Sbjct: 1063 cgccatctccggcgtcatgtggttcacccagtc 1031
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>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
             OSJNBa0043I04, complete sequence
          Length = 145191

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                    
Query: 237   cgccatctccggcgtcatgtggttcacccagtctccggcgacccctttcctgaag 291
             ||||||| ||||||||||||||||   |||||| |||||||| ||||||||||||
Sbjct: 59465 cgccatcgccggcgtcatgtggttgcgccagtcgccggcgacacctttcctgaag 59411
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                       
Query: 237      cgccatctccggcgtcatgtggttcacccagtctccggcgacccctttcctgaag 291
                ||||||| ||||||||||||||||   |||||| |||||||| ||||||||||||
Sbjct: 21713445 cgccatcgccggcgtcatgtggttgcgccagtcgccggcgacacctttcctgaag 21713391
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>gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0025K21,
              complete sequence
          Length = 146539

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                          
Query: 226    tccagccgggtcgccatctccggcgtcatgtggttcacccagtctccggcgacccctttc 285
              |||||||| | |||||||||||||| |||||||||   |||||| ||||| |||||| ||
Sbjct: 116648 tccagccgcgacgccatctccggcgacatgtggttgctccagtcgccggccacccctctc 116589

                       
Query: 286    ctgaagaag 294
              | |||||||
Sbjct: 116588 cggaagaag 116580



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 421   gagaacggccggcccatgaactccgccagcctcctcacgt 460
             |||||||| | |||||||||||| |||||| |||||||||
Sbjct: 75441 gagaacgggcagcccatgaactcggccagcttcctcacgt 75402
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>gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1024A10,
              complete sequence
          Length = 157609

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                          
Query: 226    tccagccgggtcgccatctccggcgtcatgtggttcacccagtctccggcgacccctttc 285
              |||||||| | |||||||||||||| |||||||||   |||||| ||||| |||||| ||
Sbjct: 142641 tccagccgcgacgccatctccggcgacatgtggttgctccagtcgccggccacccctctc 142582

                       
Query: 286    ctgaagaag 294
              | |||||||
Sbjct: 142581 cggaagaag 142573



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                      
Query: 421    gagaacggccggcccatgaactccgccagcctcctcacgt 460
              |||||||| | |||||||||||| |||||| |||||||||
Sbjct: 101434 gagaacgggcagcccatgaactcggccagcttcctcacgt 101395
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                            
Query: 226      tccagccgggtcgccatctccggcgtcatgtggttcacccagtctccggcgacccctttc 285
                |||||||| | |||||||||||||| |||||||||   |||||| ||||| |||||| ||
Sbjct: 17387866 tccagccgcgacgccatctccggcgacatgtggttgctccagtcgccggccacccctctc 17387807

                         
Query: 286      ctgaagaag 294
                | |||||||
Sbjct: 17387806 cggaagaag 17387798



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 421      gagaacggccggcccatgaactccgccagcctcctcacgt 460
                |||||||| | |||||||||||| |||||| |||||||||
Sbjct: 17346510 gagaacgggcagcccatgaactcggccagcttcctcacgt 17346471



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 432      gcccatgaactccgccagcctcct 455
                ||||||||||||||||||| ||||
Sbjct: 14536632 gcccatgaactccgccagcgtcct 14536655
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>dbj|AK061003.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H02, full
            insert sequence
          Length = 1222

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                        
Query: 226  tccagccgggtcgccatctccggcgtcatgtggttcacccagtctccggcgacccctttc 285
            |||||||| | |||||||||||||| |||||||||   |||||| ||||| |||||| ||
Sbjct: 1092 tccagccgcgacgccatctccggcgacatgtggttgctccagtcgccggccacccctctc 1033

                     
Query: 286  ctgaagaag 294
            | |||||||
Sbjct: 1032 cggaagaag 1024
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                            
Query: 226      tccagccgggtcgccatctccggcgtcatgtggttcacccagtctccggcgacccctttc 285
                |||||||| | |||||||||||||| |||||||||   |||||| ||||| |||||| ||
Sbjct: 17481576 tccagccgcgacgccatctccggcgacatgtggttgctccagtcgccggccacccctctc 17481517

                         
Query: 286      ctgaagaag 294
                | |||||||
Sbjct: 17481516 cggaagaag 17481508



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 421      gagaacggccggcccatgaactccgccagcctcctcacgt 460
                |||||||| | |||||||||||| |||||| |||||||||
Sbjct: 17440369 gagaacgggcagcccatgaactcggccagcttcctcacgt 17440330



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 432      gcccatgaactccgccagcctcct 455
                ||||||||||||||||||| ||||
Sbjct: 14618633 gcccatgaactccgccagcgtcct 14618656
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>ref|XM_472069.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1077

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                  
Query: 238  gccatctccggcgtcatgtggttcacccagtctccggcgacccctttcctgaag 291
            ||||||||| | ||||||||   |||||||||||| ||||| ||||||||||||
Sbjct: 1004 gccatctcccgggtcatgtgacccacccagtctccagcgactcctttcctgaag 951
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                      
Query: 238      gccatctccggcgtcatgtggttcacccagtctccggcgacccctttcctgaag 291
                ||||||||| | ||||||||   |||||||||||| ||||| ||||||||||||
Sbjct: 17195678 gccatctcccgggtcatgtgacccacccagtctccagcgactcctttcctgaag 17195731



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 423      gaacggccggcccatgaactccgccagcctcc 454
                ||||||| |||| | |||||||||||||||||
Sbjct: 26294673 gaacggcaggccgacgaactccgccagcctcc 26294642
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>emb|AL662956.3|OSJN00159 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018J19,
              complete sequence
          Length = 169559

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                    
Query: 238    gccatctccggcgtcatgtggttcacccagtctccggcgacccctttcctgaag 291
              ||||||||| | ||||||||   |||||||||||| ||||| ||||||||||||
Sbjct: 139975 gccatctcccgggtcatgtgacccacccagtctccagcgactcctttcctgaag 140028
to top
>ref|NM_195276.1| Oryza sativa (japonica cultivar-group) putative flavonol
           3-sulfotransferase (OSJNBb0038H12.7), mRNA
          Length = 1005

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 353 ccttcatcttctcgaagctgcacagctc 380
           ||||||||||||| ||||||||||||||
Sbjct: 826 ccttcatcttctcaaagctgcacagctc 799
to top
>gb|AC105932.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0038H12 map E60284SA, complete sequence
          Length = 139190

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 353   ccttcatcttctcgaagctgcacagctc 380
             ||||||||||||| ||||||||||||||
Sbjct: 21150 ccttcatcttctcaaagctgcacagctc 21123
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                           
Query: 335     tcttgttcacctccaggcccttcatcttctcgaagctgcacagc 378
               |||| |||||||||| || |||||  ||||||||||||||||||
Sbjct: 9821633 tcttattcacctccaagctcttcaggttctcgaagctgcacagc 9821676



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 235      gtcgccatctccggcgtcat 254
                ||||||||||||||||||||
Sbjct: 27205733 gtcgccatctccggcgtcat 27205752
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 353     ccttcatcttctcgaagctgcacagctc 380
               ||||||||||||| ||||||||||||||
Sbjct: 5902733 ccttcatcttctcaaagctgcacagctc 5902760
to top
>dbj|AK071840.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121F12, full
           insert sequence
          Length = 1834

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 335 tcttgttcacctccaggcccttcatcttctcgaagctgcacagc 378
           |||| |||||||||| || |||||  ||||||||||||||||||
Sbjct: 801 tcttattcacctccaagctcttcaggttctcgaagctgcacagc 758
to top
>dbj|AK070224.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042G18, full
           insert sequence
          Length = 1207

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 335 tcttgttcacctccaggcccttcatcttctcgaagctgcacagc 378
           |||| |||||||||| || |||||  ||||||||||||||||||
Sbjct: 873 tcttattcacctccaagctcttcaggttctcgaagctgcacagc 830
to top
>dbj|AK066828.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075L15, full
           insert sequence
          Length = 1243

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 353 ccttcatcttctcgaagctgcacagctc 380
           ||||||||||||| ||||||||||||||
Sbjct: 934 ccttcatcttctcaaagctgcacagctc 907
to top
>dbj|AK061183.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-D11, full
           insert sequence
          Length = 1225

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 421 gagaacggccggcccatgaactccgccagcctcctcacgt 460
           |||||||| | |||||||||||| |||||| |||||||||
Sbjct: 784 gagaacgggcagcccatgaactcggccagcttcctcacgt 745
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 353     ccttcatcttctcgaagctgcacagctc 380
               ||||||||||||| ||||||||||||||
Sbjct: 5903919 ccttcatcttctcaaagctgcacagctc 5903946
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                           
Query: 335     tcttgttcacctccaggcccttcatcttctcgaagctgcacagc 378
               |||| |||||||||| || |||||  ||||||||||||||||||
Sbjct: 9821518 tcttattcacctccaagctcttcaggttctcgaagctgcacagc 9821561



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 235      gtcgccatctccggcgtcat 254
                ||||||||||||||||||||
Sbjct: 27131333 gtcgccatctccggcgtcat 27131352
to top
>emb|AL928779.3|CNS08CC9 Oryza sativa chromosome 12, . BAC OSJNBa0054I14 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 148089

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                          
Query: 335    tcttgttcacctccaggcccttcatcttctcgaagctgcacagc 378
              |||| |||||||||| || |||||  ||||||||||||||||||
Sbjct: 147590 tcttattcacctccaagctcttcaggttctcgaagctgcacagc 147633
to top
>emb|AL954870.3|CNS08CD9 Oryza sativa chromosome 12, . BAC OSJNBb0112E17 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 140806

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                          
Query: 335    tcttgttcacctccaggcccttcatcttctcgaagctgcacagc 378
              |||| |||||||||| || |||||  ||||||||||||||||||
Sbjct: 110837 tcttattcacctccaagctcttcaggttctcgaagctgcacagc 110794
to top
>ref|XM_476630.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1644

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 338 tgttcacctccaggcccttcatcttctcgaagctgca 374
           ||||||||||||||  |||||||| |||||| |||||
Sbjct: 904 tgttcacctccaggttcttcatctgctcgaaactgca 868
to top
>gb|AE014840.1| Plasmodium falciparum 3D7 chromosome 11 section 5 of 8 of the complete
              sequence
          Length = 249995

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 4      tttataatcataattatttat 24
              |||||||||||||||||||||
Sbjct: 244595 tttataatcataattatttat 244615
to top
>emb|AL713994.15| Mouse DNA sequence from clone RP23-378H5 on chromosome 11 Contains the
             5' end of the Arf-1 gene for ADP-ribosylation factor 1,
             the Wnt3a gene for wingless-related MMTV integration site
             3A, the Wnt9a gene for wingless-type MMTV integration site
             9A, two novel genes, the 5' end of a novel gene and five
             CpG islands, complete sequence
          Length = 225396

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 366   gaagctgcacagctccaccac 386
             |||||||||||||||||||||
Sbjct: 96937 gaagctgcacagctccaccac 96917
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 357      catcttctcgaagctgcacagctcc 381
                ||||||||||||| |||||||||||
Sbjct: 33478143 catcttctcgaagttgcacagctcc 33478167



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 5        ttataatcataattatttat 24
                ||||||||||||||||||||
Sbjct: 34311528 ttataatcataattatttat 34311509
to top
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0557A01
          Length = 147201

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 357   catcttctcgaagctgcacagctcc 381
             ||||||||||||| |||||||||||
Sbjct: 23340 catcttctcgaagttgcacagctcc 23364
to top
>dbj|AP004263.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0022E03
          Length = 163032

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                   
Query: 338    tgttcacctccaggcccttcatcttctcgaagctgca 374
              ||||||||||||||  |||||||| |||||| |||||
Sbjct: 114634 tgttcacctccaggttcttcatctgctcgaaactgca 114670
to top
>dbj|AP003541.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0530H05
          Length = 145952

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 438  gaactccgccagcctcctcacgtgc 462
            ||||||||||||||||| |||||||
Sbjct: 3395 gaactccgccagcctccgcacgtgc 3419
to top
>dbj|AP003345.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0415A04
          Length = 160669

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 357    catcttctcgaagctgcacagctcc 381
              ||||||||||||| |||||||||||
Sbjct: 154309 catcttctcgaagttgcacagctcc 154333
to top
>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0072A21
          Length = 158287

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 438    gaactccgccagcctcctcacgtgc 462
              ||||||||||||||||| |||||||
Sbjct: 119923 gaactccgccagcctccgcacgtgc 119947
to top
>dbj|AK109408.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D04, full
           insert sequence
          Length = 1274

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 438 gaactccgccagcctcctcacgtgc 462
           ||||||||||||||||| |||||||
Sbjct: 842 gaactccgccagcctccgcacgtgc 818
to top
>gb|AC116121.8| Mus musculus chromosome 8, clone RP23-79K4, complete sequence
          Length = 216001

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      atttataatcataattattt 22
              ||||||||||||||||||||
Sbjct: 119349 atttataatcataattattt 119368
to top
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 353     ccttcatcttctcgaagctg 372
               ||||||||||||||||||||
Sbjct: 2728544 ccttcatcttctcgaagctg 2728525
to top
>ref|NM_191014.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 540

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 5   ttataatcataattatttat 24
           ||||||||||||||||||||
Sbjct: 203 ttataatcataattatttat 184
to top
>ref|XM_473241.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1041

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 423 gaacggccggcccatgaactccgccagcctcc 454
           ||||||| |||| | |||||||||||||||||
Sbjct: 783 gaacggcaggccgacgaactccgccagcctcc 752
to top
>gb|AC146526.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0027D12 map near 50283S, complete sequence
          Length = 128988

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 432   gcccatgaactccgccagcctcct 455
             ||||||||||||||||||| ||||
Sbjct: 36045 gcccatgaactccgccagcgtcct 36068
to top
>gb|BC034854.1| Mus musculus F-box only protein 8, mRNA (cDNA clone MGC:41115
            IMAGE:3468704), complete cds
          Length = 1899

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    atttataatcataattattt 22
            ||||||||||||||||||||
Sbjct: 1519 atttataatcataattattt 1538
to top
>ref|NM_015791.2| Mus musculus F-box only protein 8 (Fbxo8), mRNA
          Length = 3528

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    atttataatcataattattt 22
            ||||||||||||||||||||
Sbjct: 1588 atttataatcataattattt 1607
to top
>gb|AY665713.1| Equine herpesvirus 1 strain Ab4, complete genome
          Length = 150224

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 375    cagctccaccacggcctcca 394
              ||||||||||||||||||||
Sbjct: 101630 cagctccaccacggcctcca 101649
to top
>ref|XM_534554.2| PREDICTED: Canis familiaris similar to F-box only protein 8
            (F-box/SEC7 protein FBS) (LOC477359), mRNA
          Length = 1276

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    atttataatcataattattt 22
            ||||||||||||||||||||
Sbjct: 1220 atttataatcataattattt 1239
to top
>emb|AM050729.1| Mycobacterium smegmatis lexA gene and ddiG-nrdR operon, strain ATCC
            700084
          Length = 2230

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 409  tcctcggcggacgagaacggccgg 432
            ||||||||||||||||||| ||||
Sbjct: 2137 tcctcggcggacgagaacgaccgg 2114
to top
>emb|CR936838.15| Mouse DNA sequence from clone DN-127N6 on chromosome 3, complete
             sequence
          Length = 174972

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 59    catctcttattcttaatcaaacag 82
             |||||||||||||| |||||||||
Sbjct: 56835 catctcttattcttgatcaaacag 56812
to top
>gb|AC098720.2| Mus musculus BAC clone RP23-2N16 from 5, complete sequence
          Length = 214995

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 2     catttataatcataattatttatt 25
             ||||||||||||| ||||||||||
Sbjct: 45682 catttataatcatgattatttatt 45705
to top
>gb|AC011284.3| Homo sapiens BAC clone CTD-2326L19 from 7, complete sequence
          Length = 92959

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    atctcttattcttaatcaaa 79
             ||||||||||||||||||||
Sbjct: 26239 atctcttattcttaatcaaa 26258
to top
>gb|AC114553.6| Mus musculus chromosome 5, clone RP23-408M16, complete sequence
          Length = 198281

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 2     catttataatcataattatttatt 25
             ||||||||||||| ||||||||||
Sbjct: 47916 catttataatcatgattatttatt 47893
to top
>gb|AY464052.1| Equine herpesvirus 1 strain V592, complete genome
          Length = 149430

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 375    cagctccaccacggcctcca 394
              ||||||||||||||||||||
Sbjct: 101561 cagctccaccacggcctcca 101580
to top
>emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0038O10,
             complete sequence
          Length = 141545

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 423   gaacggccggcccatgaactccgccagcctcc 454
             ||||||| |||| | |||||||||||||||||
Sbjct: 71250 gaacggcaggccgacgaactccgccagcctcc 71219
to top
>emb|BX571680.7| Zebrafish DNA sequence from clone DKEY-30L20 in linkage group 7, complete
              sequence
          Length = 145338

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 5      ttataatcataattatttattcgataat 32
              |||| ||||| |||||||||||||||||
Sbjct: 137253 ttattatcattattatttattcgataat 137280
to top
>emb|AJ720952.1| Gallus gallus mRNA for hypothetical protein, clone 30p13
          Length = 1632

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    atttataatcataattattt 22
            ||||||||||||||||||||
Sbjct: 1555 atttataatcataattattt 1574
to top
>ref|NM_001006446.1| Gallus gallus F-box protein 8 (FBXO8), mRNA
          Length = 1632

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    atttataatcataattattt 22
            ||||||||||||||||||||
Sbjct: 1555 atttataatcataattattt 1574
to top
>emb|BX936431.7| Zebrafish DNA sequence from clone CH211-208A5 in linkage group 6,
              complete sequence
          Length = 127584

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 2      catttataatcataattatttatt 25
              |||||||||| |||||||||||||
Sbjct: 107179 catttataattataattatttatt 107202
to top
>gb|BC103444.1| Bos taurus F-box protein 8, mRNA (cDNA clone MGC:128685
            IMAGE:7987332), complete cds
          Length = 1696

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    atttataatcataattattt 22
            ||||||||||||||||||||
Sbjct: 1596 atttataatcataattattt 1615
to top
>dbj|AK160145.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:1700020B17 product:F-box only protein 8,
            full insert sequence
          Length = 1857

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    atttataatcataattattt 22
            ||||||||||||||||||||
Sbjct: 1570 atttataatcataattattt 1589
to top
>dbj|AK078111.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length
            enriched library, clone:6330500C02 product:f-box only
            protein 8, full insert sequence
          Length = 1996

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    atttataatcataattattt 22
            ||||||||||||||||||||
Sbjct: 1607 atttataatcataattattt 1626
to top
>dbj|AK077595.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:5730462P11 product:f-box only
            protein 8, full insert sequence
          Length = 1971

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    atttataatcataattattt 22
            ||||||||||||||||||||
Sbjct: 1609 atttataatcataattattt 1628
to top
>dbj|AK002538.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched
            library, clone:0610011G18 product:f-box only protein 8,
            full insert sequence
          Length = 1885

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    atttataatcataattattt 22
            ||||||||||||||||||||
Sbjct: 1598 atttataatcataattattt 1617
to top
>ref|NM_001015667.2| Bos taurus F-box protein 8 (FBXO8), mRNA
          Length = 1696

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    atttataatcataattattt 22
            ||||||||||||||||||||
Sbjct: 1596 atttataatcataattattt 1615
to top
>dbj|AK012401.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:2700049C03 product:f-box only
            protein 8, full insert sequence
          Length = 1667

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    atttataatcataattattt 22
            ||||||||||||||||||||
Sbjct: 1608 atttataatcataattattt 1627
to top
>dbj|AK019043.1| Mus musculus adult male small intestine cDNA, RIKEN full-length
           enriched library, clone:2010016I22 product:f-box only
           protein 8, full insert sequence
          Length = 297

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 3   atttataatcataattattt 22
           ||||||||||||||||||||
Sbjct: 238 atttataatcataattattt 257
to top
>dbj|AK029989.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4932412P22 product:f-box only protein 8,
            full insert sequence
          Length = 3528

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    atttataatcataattattt 22
            ||||||||||||||||||||
Sbjct: 1588 atttataatcataattattt 1607
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                            
Query: 237      cgccatctccggcgtcatgtggttcacccagtctccggcgacccctttcctgaagaaggc 296
                |||||||||||||| |||||| | |  |||||||||| |  | || ||||||||||||||
Sbjct: 27986336 cgccatctccggcgacatgtgctccttccagtctccgacctcacccttcctgaagaaggc 27986395
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 385     acggcctccacggctccggc 404
               ||||||||||||||||||||
Sbjct: 2371285 acggcctccacggctccggc 2371304
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>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0072I06
          Length = 162411

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 238   gccatctccggcgtcatgtggttcacccagtctccg 273
             |||||||| ||||| | |||||||||||| ||||||
Sbjct: 32038 gccatctctggcgtgacgtggttcacccaatctccg 32073
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>dbj|AP003073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0702B09
          Length = 172541

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      ttataatcataattatttat 24
              ||||||||||||||||||||
Sbjct: 147214 ttataatcataattatttat 147195
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>ref|XM_573904.1| PREDICTED: Rattus norvegicus F-box only protein 8 (predicted)
            (Fbxo8_predicted), mRNA
          Length = 1557

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    atttataatcataattattt 22
            ||||||||||||||||||||
Sbjct: 1335 atttataatcataattattt 1354
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>gb|AC130403.3| Homo sapiens 12 BAC RP11-674N14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 195432

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 433   cccatgaactccgccagcctcctc 456
             |||||||||||| |||||||||||
Sbjct: 25723 cccatgaactcctccagcctcctc 25746
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>gb|AF176527.1| Mus musculus F-box protein FBX8 mRNA, complete cds
          Length = 1681

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    atttataatcataattattt 22
            ||||||||||||||||||||
Sbjct: 1594 atttataatcataattattt 1613
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 395    cggctccggcgccctcctcggcgg 418
              ||||||||| ||||||||||||||
Sbjct: 918258 cggctccggtgccctcctcggcgg 918235
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>dbj|AP004255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1212_A08
          Length = 119304

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                         
Query: 237   cgccatctccggcgtcatgtggttcacccagtctccggcgacccctttcctgaagaaggc 296
             |||||||||||||| |||||| | |  |||||||||| |  | || ||||||||||||||
Sbjct: 29998 cgccatctccggcgacatgtgctccttccagtctccgacctcacccttcctgaagaaggc 30057
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>dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1123_G04
          Length = 124666

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                          
Query: 237    cgccatctccggcgtcatgtggttcacccagtctccggcgacccctttcctgaagaaggc 296
              |||||||||||||| |||||| | |  |||||||||| |  | || ||||||||||||||
Sbjct: 113788 cgccatctccggcgacatgtgctccttccagtctccgacctcacccttcctgaagaaggc 113847
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 377    gctccaccacggcctccacg 396
              ||||||||||||||||||||
Sbjct: 123796 gctccaccacggcctccacg 123777
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>gb|AF072715.1|AF072715 Mycoplasma mycoides capri lipoprotein A precursor (lppA) and putative
            methylase genes, complete cds; mannitol-1-phosphate
            dehydrogenase (mtlD) gene, partial cds; and unknown genes
          Length = 4581

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    tataatcataattatttatt 25
            ||||||||||||||||||||
Sbjct: 2478 tataatcataattatttatt 2497
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>dbj|AK059900.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-G02, full
           insert sequence
          Length = 1103

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 432 gcccatgaactccgccagcctcct 455
           ||||||||||||||||||| ||||
Sbjct: 682 gcccatgaactccgccagcgtcct 659
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>gb|BT020954.1| Bos taurus F-box protein 8 (FBXO8), mRNA, complete cds
          Length = 1592

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    atttataatcataattattt 22
            ||||||||||||||||||||
Sbjct: 1533 atttataatcataattattt 1552
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>gb|BT020782.1| Bos taurus F-box protein 8 (FBXO8), mRNA, complete cds
          Length = 1593

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    atttataatcataattattt 22
            ||||||||||||||||||||
Sbjct: 1534 atttataatcataattattt 1553
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>gb|BC088452.1| Rattus norvegicus F-box only protein 8, mRNA (cDNA clone MGC:95100
            IMAGE:7126921), complete cds
          Length = 1646

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    atttataatcataattattt 22
            ||||||||||||||||||||
Sbjct: 1562 atttataatcataattattt 1581
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>ref|NM_001012050.1| Rattus norvegicus F-box only protein 8 (Fbxo8), mRNA
          Length = 1646

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    atttataatcataattattt 22
            ||||||||||||||||||||
Sbjct: 1562 atttataatcataattattt 1581
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>emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559_C07 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 145816

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 235    gtcgccatctccggcgtcat 254
              ||||||||||||||||||||
Sbjct: 144633 gtcgccatctccggcgtcat 144652
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>emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268_D02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 146585

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   gtcgccatctccggcgtcat 254
             ||||||||||||||||||||
Sbjct: 18765 gtcgccatctccggcgtcat 18784
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>emb|AL671857.16| Mouse DNA sequence from clone RP23-176A21 on chromosome 3, complete
              sequence
          Length = 207354

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 59     catctcttattcttaatcaaacag 82
              |||||||||||||| |||||||||
Sbjct: 150530 catctcttattcttgatcaaacag 150507


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,530,817
Number of Sequences: 3902068
Number of extensions: 3530817
Number of successful extensions: 70546
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69706
Number of HSP's gapped (non-prelim): 837
length of query: 475
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 453
effective length of database: 17,147,199,772
effective search space: 7767681496716
effective search space used: 7767681496716
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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