ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart28a03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZF2N1_ARATH (Q6NNI8) Zinc finger A20 and AN1 domains-containing ... 56 4e-08
2ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing ... 53 4e-07
3ISAP1_ORYSA (Q9LLX1) Multiple stress-responsive zinc-finger prot... 52 8e-07
4Z20D2_MOUSE (O88878) Zinc finger A20 domain-containing protein 2... 47 3e-05
5Z20D2_HUMAN (O76080) Zinc finger A20 domain-containing protein 2... 47 3e-05
6ZF2N2_ARATH (Q9SJM6) Zinc finger A20 and AN1 domains-containing ... 46 6e-05
7NORQ_PARDE (Q51664) Protein norQ 32 1.1
8YVDC_LACLA (Q9CE03) Hypothetical UPF0177 protein yvdC 30 4.3
9VG40_ICHV1 (Q00145) Hypothetical gene 40 protein 30 4.3
10IL17E_HUMAN (Q9H293) Interleukin-17E precursor (IL-17E) (Interle... 29 5.6
11PA2X_BUNFA (P14411) Phospholipase A2 isozyme X, basic (EC 3.1.1.... 29 5.6
12DUOX1_PIG (Q8HZK3) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.1... 29 7.3
13SYA_BUCBP (P59420) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 28 9.6
14NIRQ_PSEST (Q02441) Denitrification regulatory protein nirQ 28 9.6

>ZF2N1_ARATH (Q6NNI8) Zinc finger A20 and AN1 domains-containing protein|
           At1g12440
          Length = 168

 Score = 56.2 bits (134), Expect = 4e-08
 Identities = 23/35 (65%), Positives = 31/35 (88%)
 Frame = -1

Query: 481 RYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 377
           RY + H+CQFD++  AR+AIAKANPVVKA+K+D+I
Sbjct: 134 RYPESHECQFDFKGVAREAIAKANPVVKADKVDRI 168



to top

>ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing protein|
           At4g12040
          Length = 175

 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 21/35 (60%), Positives = 29/35 (82%)
 Frame = -1

Query: 481 RYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 377
           RY +KH+C FD++   RDAIAKANP+VKA+K+ +I
Sbjct: 141 RYPEKHECSFDFKEVGRDAIAKANPLVKADKVQRI 175



to top

>ISAP1_ORYSA (Q9LLX1) Multiple stress-responsive zinc-finger protein ISAP1|
           (Stress-associated protein 1) (OsISAP1)
          Length = 164

 Score = 52.0 bits (123), Expect = 8e-07
 Identities = 21/32 (65%), Positives = 28/32 (87%)
 Frame = -1

Query: 481 RYSDKHDCQFDYRTAARDAIAKANPVVKAEKL 386
           RYSD+H C +DY++AARDAIA+ NPVV+A K+
Sbjct: 130 RYSDRHGCSYDYKSAARDAIARDNPVVRAAKI 161



to top

>Z20D2_MOUSE (O88878) Zinc finger A20 domain-containing protein 2 (Zinc finger|
           protein 216)
          Length = 213

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 20/35 (57%), Positives = 25/35 (71%)
 Frame = -1

Query: 481 RYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 377
           RYSDKH+C +DY+  A   I K NPVV AEK+ +I
Sbjct: 179 RYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213



to top

>Z20D2_HUMAN (O76080) Zinc finger A20 domain-containing protein 2 (Zinc finger|
           protein 216)
          Length = 213

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 20/35 (57%), Positives = 25/35 (71%)
 Frame = -1

Query: 481 RYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 377
           RYSDKH+C +DY+  A   I K NPVV AEK+ +I
Sbjct: 179 RYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213



to top

>ZF2N2_ARATH (Q9SJM6) Zinc finger A20 and AN1 domains-containing protein|
           At2g36320
          Length = 161

 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 20/35 (57%), Positives = 26/35 (74%)
 Frame = -1

Query: 481 RYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 377
           RY + H C FD+++A R+ IAKANP+V A KL KI
Sbjct: 127 RYPEVHGCTFDFKSAGREEIAKANPLVIAAKLQKI 161



to top

>NORQ_PARDE (Q51664) Protein norQ|
          Length = 270

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -3

Query: 389 ARQDLGVL-QGRNGCNLPRFIIHLCCAILAPPFLVGCH 279
           A  DL VL +G  GC   RF+ H+   +  P + V CH
Sbjct: 32  AANDLPVLLKGPTGCGKTRFVAHMAARLGRPLYTVACH 69



to top

>YVDC_LACLA (Q9CE03) Hypothetical UPF0177 protein yvdC|
          Length = 261

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 14/100 (14%)
 Frame = -1

Query: 394 EKLDKI*VSYREEMVAICQGSSSIFAVPSLHLPFLLAATFPKLYGIVM--HTASWQLQEL 221
           EKL  +   YR  +V I     S  +V   HLPFL+ A    + G++   H + W +  L
Sbjct: 5   EKLQSL-AKYRWVIVIILALLFSALSVSIFHLPFLMTALVLSIVGLIFAYHKSVWLV--L 61

Query: 220 NPLSHSEWFACCV------------TLFMVVFSVSIVASH 137
             LS+    A  +             +F ++F ++I++S+
Sbjct: 62  FILSNLPMLATTIFAYQHHFTTLDTVIFFIIFLLTIISSY 101



to top

>VG40_ICHV1 (Q00145) Hypothetical gene 40 protein|
          Length = 136

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = -2

Query: 393 RSSTRFRCPTGKKWLQSAKVHHPSLLCHPCTSLSCWLPHFLNCTAS*CTLRRGS 232
           RS++ F C    + L   ++  PS+    CT+ SCW  H L  +++   +RR S
Sbjct: 26  RSNSWFVCKIVYRCLSPRRIISPSI----CTAFSCWANHGLRLSST-AAMRRSS 74



to top

>IL17E_HUMAN (Q9H293) Interleukin-17E precursor (IL-17E) (Interleukin-25)|
           (IL-25)
          Length = 177

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
 Frame = +1

Query: 346 LQPFLPCRTPKSCRASLPSPLG----WPWRW 426
           L+P  P R P+SCRAS   PL      PWR+
Sbjct: 62  LEPARPNRHPESCRASEDGPLNSRAISPWRY 92



to top

>PA2X_BUNFA (P14411) Phospholipase A2 isozyme X, basic (EC 3.1.1.4)|
           (Phosphatidylcholine 2-acylhydrolase)
          Length = 118

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
 Frame = +3

Query: 228 CSCHDAVCITM---PYNLGNVAANKKGRCK 308
           C C  A  I     PYNL N   NKK  CK
Sbjct: 89  CDCDRAAAICFAAAPYNLSNFGINKKTHCK 118



to top

>DUOX1_PIG (Q8HZK3) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-)|
          Length = 1553

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
 Frame = -2

Query: 201  NGLRVV*LYSWWFFRSV-----LWLLILASSVYVLLSH 103
            NG      Y WWFF++V     + LL++ + +YV  SH
Sbjct: 1176 NGSEFPQKYYWWFFQTVPGLTGVMLLLILAIMYVFASH 1213



to top

>SYA_BUCBP (P59420) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 880

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 374 GVLQGRNGCNLPRFI 330
           G + G NGCN+PRF+
Sbjct: 195 GTIPGNNGCNVPRFV 209



to top

>NIRQ_PSEST (Q02441) Denitrification regulatory protein nirQ|
          Length = 275

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 371 VLQGRNGCNLPRFIIHLCCAILAPPFLVGCH 279
           +++G  GC   RF+ H+   +  P + V CH
Sbjct: 44  LIKGPTGCGKTRFVQHMAHRLNLPLYTVACH 74


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,896,054
Number of Sequences: 219361
Number of extensions: 1546357
Number of successful extensions: 4073
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4072
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top