Clone Name | rbart27h11 |
---|---|
Clone Library Name | barley_pub |
>DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 393 Score = 170 bits (430), Expect = 2e-42 Identities = 84/93 (90%), Positives = 88/93 (94%), Gaps = 2/93 (2%) Frame = -3 Query: 478 ATWGKKLDAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGENVES 299 ATWGKKLDAEAYDCNN+VEQELPCGGVLIYQSF ANEE+AVSAGSPRSVFHCF ENVES Sbjct: 303 ATWGKKLDAEAYDCNNVVEQELPCGGVLIYQSFAANEELAVSAGSPRSVFHCF--ENVES 360 Query: 298 GHPLVKEGKLANLLAWRAEEDSLEE--GAVLCE 206 GHPLVKEGKLANLLAWRAEE+SLEE GA+LCE Sbjct: 361 GHPLVKEGKLANLLAWRAEEESLEEGTGALLCE 393
>DCAM_ORYSA (O24215) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 398 Score = 114 bits (286), Expect = 1e-25 Identities = 56/84 (66%), Positives = 67/84 (79%) Frame = -3 Query: 475 TWGKKLDAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGENVESG 296 TW K+L+A+AY CNN+VEQELPCGG+LIYQSF A E+V V+ GSP+SV HCFE EN+ + Sbjct: 311 TWAKELNADAYKCNNMVEQELPCGGLLIYQSFDATEDVPVAVGSPKSVLHCFEAENMVNP 370 Query: 295 HPLVKEGKLANLLAWRAEEDSLEE 224 P VKEGKL NLL W ED+LEE Sbjct: 371 AP-VKEGKLGNLLPW--GEDALEE 391
>DCAM_MAIZE (O24575) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 400 Score = 112 bits (280), Expect = 5e-25 Identities = 56/87 (64%), Positives = 66/87 (75%), Gaps = 1/87 (1%) Frame = -3 Query: 475 TWGKKLDAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGENVESG 296 TWGK L AE YDCNN+VEQELP GG+L+YQSF A E+ A SP+SVFHCF+GENVES Sbjct: 311 TWGKALGAEVYDCNNMVEQELPGGGLLVYQSFCAAEDAV--ATSPKSVFHCFDGENVESA 368 Query: 295 -HPLVKEGKLANLLAWRAEEDSLEEGA 218 P+ K+ KLANLL W E D++EE A Sbjct: 369 PPPMKKDYKLANLLCWEEEADAMEEKA 395
>DCAM_VICFA (Q9M4D8) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 353 Score = 35.8 bits (81), Expect = 0.060 Identities = 20/56 (35%), Positives = 27/56 (48%) Frame = -3 Query: 469 GKKLDAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGENVE 302 G LD + Y C+ Q L G ++YQ F A GSPRS C++ E+ E Sbjct: 301 GCLLDVKGYCCDEKSHQGLGMSGSVVYQKFVK----ASDCGSPRSTLKCWKDEDEE 352
>DCAM_IPOBA (Q9M6K1) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 362 Score = 33.9 bits (76), Expect = 0.23 Identities = 20/52 (38%), Positives = 25/52 (48%) Frame = -3 Query: 463 KLDAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGEN 308 KLD + Y C + L GG ++Y FT+ S GSPRS C EN Sbjct: 305 KLDVKGYACGERSYEGLNKGGSIMYCGFTSTG----SCGSPRSTLLCCWSEN 352
>DCAM_PEA (Q43820) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 353 Score = 33.5 bits (75), Expect = 0.30 Identities = 19/56 (33%), Positives = 25/56 (44%) Frame = -3 Query: 469 GKKLDAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGENVE 302 G LD + Y C Q L G ++YQ F GSPRS C++ E+ E Sbjct: 301 GCLLDVKGYCCEEKSHQGLGMSGSVVYQKFLKTS----YCGSPRSTLKCWKDEDEE 352
>DCAM_IPONI (Q96471) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 362 Score = 32.7 bits (73), Expect = 0.51 Identities = 19/52 (36%), Positives = 25/52 (48%) Frame = -3 Query: 463 KLDAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGEN 308 +LD + Y C + L GG ++Y FT+ S GSPRS C EN Sbjct: 305 ELDVKGYACGERSYEALGKGGSIMYCGFTSTG----SCGSPRSTLLCCWSEN 352
>BSL3_ARATH (Q9SHS7) Serine/threonine-protein phosphatase BSL3 (EC 3.1.3.16)| (BSU1-like protein 3) Length = 715 Score = 28.9 bits (63), Expect = 7.3 Identities = 30/99 (30%), Positives = 37/99 (37%), Gaps = 7/99 (7%) Frame = +2 Query: 203 SLAQHRALLQRILLRPPCEQVGKLAFLDQRVAALHILALEAVEDG-----PGRPGGDSNL 367 S A H A PP G+ F D+R L A +AV G P P G +L Sbjct: 301 SAASHAAAAAAATNTPPGRSPGRYGFSDERTGELPESAPDAVVLGSPVAPPATPSGKPSL 360 Query: 368 FI--RGKALVDEDAPAGELLLHDVVAVVCLGVELLAPGG 478 + A+ + PAG L H V LL P G Sbjct: 361 SLIKPDSAVPNSVIPAGVRLHHRAV------THLLKPRG 393
>SMI1_YARLI (Q6CDX0) KNR4/SMI1 homolog| Length = 713 Score = 28.9 bits (63), Expect = 7.3 Identities = 16/47 (34%), Positives = 23/47 (48%) Frame = -3 Query: 355 SAGSPRSVFHCFEGENVESGHPLVKEGKLANLLAWRAEEDSLEEGAV 215 +AGSP S G P+ + N+ +W A +DS+ EGAV Sbjct: 260 NAGSPNSS---------TPGSPVASVARQKNISSWLASQDSVPEGAV 297 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,607,213 Number of Sequences: 219361 Number of extensions: 1120045 Number of successful extensions: 3347 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 3275 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3343 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)