Clone Name | rbart27h06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TA2R8_PAPHA (Q646G4) Taste receptor type 2 member 8 (T2R8) | 30 | 2.2 | 2 | SPP2_NEUCR (Q7SBU7) Pre-mRNA-splicing factor spp-2 | 29 | 6.4 | 3 | TR150_HUMAN (Q9Y2W1) Thyroid hormone receptor-associated protein... | 29 | 6.4 | 4 | TIP60_DROME (Q960X4) Histone acetyltransferase Tip60 (EC 2.3.1.48) | 29 | 6.4 | 5 | FILA_HUMAN (P20930) Filaggrin | 28 | 8.4 |
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>TA2R8_PAPHA (Q646G4) Taste receptor type 2 member 8 (T2R8)| Length = 309 Score = 30.4 bits (67), Expect = 2.2 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = -1 Query: 145 LSAFDCRVCALLFARICLVSACVVDARVI-MYCCLYAFVEI*RVLLNF 5 +S DC + L+ +RICL+S VV+ VI +Y +Y ++ V+ F Sbjct: 41 ISTIDCILTNLVISRICLISVMVVNGIVIVLYPDVYTKTKLQIVICTF 88
>SPP2_NEUCR (Q7SBU7) Pre-mRNA-splicing factor spp-2| Length = 358 Score = 28.9 bits (63), Expect = 6.4 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Frame = +1 Query: 94 NRSAQKAEHTHGNQKQRATD--TRTRRQSADHSXXXXXXXXXPWCCDE-ETAPPRW 252 NRS + H + + + D +R+RR+S S P E ETAPP+W Sbjct: 114 NRSQDRDRHNNRSSRPSRDDDASRSRRRSTSRSRDRDHKPKDPKDLQEPETAPPKW 169
>TR150_HUMAN (Q9Y2W1) Thyroid hormone receptor-associated protein 3 (Thyroid| hormone receptor-associated protein complex 150 kDa component) (Trap150) Length = 955 Score = 28.9 bits (63), Expect = 6.4 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +1 Query: 85 HSLNRSAQKAEHTHGNQKQRATDTRTRRQSADHS 186 HS RSA+K E TH K++ R R +S S Sbjct: 748 HSRERSAEKTEKTHKGSKKQKKHRRARDRSRSSS 781
>TIP60_DROME (Q960X4) Histone acetyltransferase Tip60 (EC 2.3.1.48)| Length = 541 Score = 28.9 bits (63), Expect = 6.4 Identities = 15/41 (36%), Positives = 18/41 (43%) Frame = +1 Query: 34 QKRIDNNT*SHGHPLHKHSLNRSAQKAEHTHGNQKQRATDT 156 QKRI+ +HG H H S Q+ H H Q T T Sbjct: 171 QKRINRKRKNHGGSAHGHHSLTSQQQQSHPHPTTPQTPTAT 211
>FILA_HUMAN (P20930) Filaggrin| Length = 4061 Score = 28.5 bits (62), Expect = 8.4 Identities = 13/53 (24%), Positives = 24/53 (45%) Frame = +1 Query: 28 FRQKRIDNNT*SHGHPLHKHSLNRSAQKAEHTHGNQKQRATDTRTRRQSADHS 186 + ++ +D + S H H H+ ++ A H + + +TR QS D S Sbjct: 3773 YHEQSVDRSGHSGSH--HSHTTSQGRSDASHGQSGSRSASRETRNEEQSGDGS 3823 Score = 28.5 bits (62), Expect = 8.4 Identities = 12/41 (29%), Positives = 17/41 (41%) Frame = +1 Query: 64 HGHPLHKHSLNRSAQKAEHTHGNQKQRATDTRTRRQSADHS 186 H H H+ ++ A H H + + TR QS D S Sbjct: 2487 HSGSHHSHTTSQGRSDASHGHSGSRSASRQTRNDEQSGDGS 2527 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,426,234 Number of Sequences: 219361 Number of extensions: 737769 Number of successful extensions: 2388 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2296 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2382 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)