Clone Name | rbart27g10 |
---|---|
Clone Library Name | barley_pub |
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 56.2 bits (134), Expect = 3e-08 Identities = 28/67 (41%), Positives = 35/67 (52%), Gaps = 9/67 (13%) Frame = -1 Query: 412 YGFSTNLRACCGAGGGKYNYQNGARCGMSG---------ASACGNPSSSLSWDGIHLTEA 260 +GF +L +CCG GG KYNY G CGM C P ++ WDG+H T+A Sbjct: 294 HGFKGSLVSCCGHGG-KYNYNKGIGCGMKKIVKGKEVYIGKPCDEPDKAVVWDGVHFTQA 352 Query: 259 AYKKIAD 239 A K I D Sbjct: 353 ANKFIFD 359
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 55.1 bits (131), Expect = 8e-08 Identities = 27/66 (40%), Positives = 36/66 (54%) Frame = -1 Query: 442 VFDMVKSPASYGFSTNLRACCGAGGGKYNYQNGARCGMSGASACGNPSSSLSWDGIHLTE 263 + M+++PA+YGF + CC G GA C S + C N SS L WDG+H T+ Sbjct: 459 ISQMLETPAAYGFEETKKPCCKTG----LLSAGALCKKSTSKICPNTSSYLFWDGVHPTQ 514 Query: 262 AAYKKI 245 AYK I Sbjct: 515 RAYKTI 520
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 52.8 bits (125), Expect = 4e-07 Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 9/88 (10%) Frame = -1 Query: 439 FDMVKSPASYGFSTNLRACCGAGGGKYNYQNGARCGMSGAS---------ACGNPSSSLS 287 + + P +GF L CCG GG KYN+ A CG + + +C PS ++ Sbjct: 287 YSLFSEPEKHGFEFPLITCCGYGG-KYNFSVTAPCGDTVTADDGTKIVVGSCACPSVRVN 345 Query: 286 WDGIHLTEAAYKKIADGWVNGPYCHPAI 203 WDG H TEAA + D G + P + Sbjct: 346 WDGAHYTEAANEYFFDQISTGAFSDPPV 373
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 40.8 bits (94), Expect = 0.002 Identities = 22/61 (36%), Positives = 29/61 (47%) Frame = -1 Query: 433 MVKSPASYGFSTNLRACCGAGGGKYNYQNGARCGMSGASACGNPSSSLSWDGIHLTEAAY 254 M++SP YGF + CC G K G C N SS L WDG+H ++ AY Sbjct: 379 MLESPEDYGFEEIKKPCCKIGLTK----GGVFCKERTLKNMSNASSYLFWDGLHPSQRAY 434 Query: 253 K 251 + Sbjct: 435 E 435
>DED1_DEBHA (Q6BU54) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 630 Score = 34.3 bits (77), Expect = 0.14 Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 7/58 (12%) Frame = -1 Query: 436 DMVKSPASYG---FSTNLRACCGAGGGKYNYQNGARCGMSG----ASACGNPSSSLSW 284 D K SYG S+N +GGG + NG G SG +S+ GNPS+S SW Sbjct: 572 DFRKQGGSYGGGASSSNWGGSSSSGGGWGSSNNGGYSGYSGRSNGSSSYGNPSASNSW 629
>GUNX_CLOTM (P15329) Putative endoglucanase X (EC 3.2.1.4) (EGX)| (Endo-1,4-beta-glucanase) (Cellulase) (Fragment) Length = 224 Score = 34.3 bits (77), Expect = 0.14 Identities = 12/23 (52%), Positives = 18/23 (78%) Frame = -1 Query: 301 SSSLSWDGIHLTEAAYKKIADGW 233 ++ +SWDG+HL+E Y KIA+ W Sbjct: 111 NTDISWDGLHLSEIGYTKIANIW 133
>P53_CANFA (Q29537) Cellular tumor antigen p53 (Tumor suppressor p53)| Length = 381 Score = 29.3 bits (64), Expect = 4.5 Identities = 14/46 (30%), Positives = 20/46 (43%) Frame = +3 Query: 246 IFLYAASVRWMPSQLSDDDGLPHADAPDMPHRAPFW*LYLPPPAPQ 383 + L + V W+ D +P AP P AP W L P+P+ Sbjct: 43 LLLPESVVNWLDEDSDDAPRMPATSAPTAPGPAPSWPLSSSVPSPK 88
>ILF3_HUMAN (Q12906) Interleukin enhancer-binding factor 3 (Nuclear factor of| activated T-cells 90 kDa) (NF-AT-90) (Double-stranded RNA-binding protein 76) (DRBP76) (Translational control protein 80) (TCP80) (Nuclear factor associated with dsRNA) (NFAR) ( Length = 894 Score = 29.3 bits (64), Expect = 4.5 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = -1 Query: 415 SYGFSTNLRACCGAGGGKYNYQNGARCGMSGASACGNPSSS 293 SY +S + + G GG YNY++ SG + GN S Sbjct: 783 SYSYSNSYNSPGGGGGSDYNYESKFNYSGSGGRSGGNSYGS 823
>LGB3_MEDSA (P14962) Leghemoglobin-3 (Leghemoglobin III)| Length = 146 Score = 28.9 bits (63), Expect = 5.9 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = -3 Query: 212 PGHSVLVLVLVLERAPASGCSSVSFLEAGEGRGGSP 105 PG+SVL ++LE+APA+ SFL+ G SP Sbjct: 22 PGNSVLFYTIILEKAPAAK-GMFSFLKDSAGVQDSP 56
>KIF17_MOUSE (Q99PW8) Kinesin-like protein KIF17 (MmKIF17)| Length = 1038 Score = 28.5 bits (62), Expect = 7.7 Identities = 14/40 (35%), Positives = 18/40 (45%) Frame = +3 Query: 231 TQPSAIFLYAASVRWMPSQLSDDDGLPHADAPDMPHRAPF 350 T P Y S + S LS++ LP P+MP PF Sbjct: 973 TDPMKSLTYHNSPPGLNSSLSNNSALPPTQTPEMPQPRPF 1012 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,984,318 Number of Sequences: 219361 Number of extensions: 1041701 Number of successful extensions: 3377 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 3209 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3362 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)