ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart27g09 |
|---|---|
| Clone Library Name | barley_pub |
>GSTU1_ORYSA (O65032) Probable glutathione S-transferase GSTU1 (EC 2.5.1.18)| Length = 231 Score = 70.9 bits (172), Expect = 2e-12 Identities = 30/43 (69%), Positives = 38/43 (88%) Frame = -3 Query: 469 EVAPKIAAWAKRCGERESVAKSLYSPEKVYDFIGLLKKRYGIE 341 EVAP++AAWA+RCG +SV K L SPEKVYDF+G+LKK+YG+E Sbjct: 189 EVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKKYGVE 231
>GSTXC_TOBAC (P49332) Probable glutathione S-transferase parC (EC 2.5.1.18)| (Auxin-regulated protein parC) Length = 221 Score = 51.6 bits (122), Expect = 1e-06 Identities = 22/40 (55%), Positives = 31/40 (77%) Frame = -3 Query: 460 PKIAAWAKRCGERESVAKSLYSPEKVYDFIGLLKKRYGIE 341 PK AWAKRC +RESVAKSL KV +F+ +L++++G+E Sbjct: 182 PKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKFGLE 221
>GSTX4_TOBAC (Q03666) Probable glutathione S-transferase (EC 2.5.1.18)| (Auxin-induced protein PCNT107) Length = 221 Score = 51.6 bits (122), Expect = 1e-06 Identities = 22/40 (55%), Positives = 31/40 (77%) Frame = -3 Query: 460 PKIAAWAKRCGERESVAKSLYSPEKVYDFIGLLKKRYGIE 341 PK AWAKRC +RESVAKSL KV +F+ +L++++G+E Sbjct: 182 PKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKFGLE 221
>GSTXA_TOBAC (P25317) Probable glutathione S-transferase parA (EC 2.5.1.18)| (Auxin-regulated protein parA) (STR246C protein) Length = 220 Score = 45.4 bits (106), Expect = 7e-05 Identities = 20/39 (51%), Positives = 26/39 (66%) Frame = -3 Query: 460 PKIAAWAKRCGERESVAKSLYSPEKVYDFIGLLKKRYGI 344 PK+ WAK C E ESV+KSL P K+Y F+ LK + G+ Sbjct: 181 PKLVVWAKTCMESESVSKSLPHPHKIYGFVLELKHKLGL 219
>LGUL_SOYBN (P46417) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)| (Aldoketomutase) (Glyoxalase I) Length = 219 Score = 40.8 bits (94), Expect = 0.002 Identities = 19/40 (47%), Positives = 26/40 (65%) Frame = -3 Query: 475 LAEVAPKIAAWAKRCGERESVAKSLYSPEKVYDFIGLLKK 356 + E PK+ AW KRC ERE+V+ +L +KVY I L+K Sbjct: 175 MEEECPKLMAWVKRCMERETVSNTLPDAKKVYGLIVELQK 214
>GSTX1_NICPL (P50471) Probable glutathione S-transferase MSR-1 (EC 2.5.1.18)| (Auxin-regulated protein MSR-1) Length = 219 Score = 36.6 bits (83), Expect = 0.034 Identities = 17/38 (44%), Positives = 24/38 (63%) Frame = -3 Query: 457 KIAAWAKRCGERESVAKSLYSPEKVYDFIGLLKKRYGI 344 K+ W + C E E V+KSL P K+YDF+ LK + G+ Sbjct: 182 KLVVW-QNCMENERVSKSLPHPHKIYDFVLELKHKLGL 218
>CYAA_DICDI (Q03100) Adenylate cyclase, aggregation specific (EC 4.6.1.1) (ATP| pyrophosphate-lyase) (Adenylyl cyclase) Length = 1407 Score = 32.0 bits (71), Expect = 0.85 Identities = 13/47 (27%), Positives = 24/47 (51%) Frame = +1 Query: 55 GIAGGNSVLPPPKTRVDT*HTHRAGEHNTHPHCLTQPYTTNHSHANN 195 G GG + P +++ + HN HP+ L+ P+ NH++ N+ Sbjct: 68 GGGGGGGHINPMHLNLNSITNNHNNHHNHHPNTLSTPHNNNHNNNNH 114
>CNG_ICTPU (P55934) Cyclic nucleotide-gated cation channel| Length = 682 Score = 30.4 bits (67), Expect = 2.5 Identities = 19/44 (43%), Positives = 19/44 (43%), Gaps = 1/44 (2%) Frame = +2 Query: 86 HRRPGLTHDTHIEQEST-TRTHTA*PNHILPTTHTRTIYSTNKE 214 H GL D E E THT H P THTRT TN E Sbjct: 636 HTGLGLLSDNEAEGEHAGVPTHTHADIHAQPETHTRTSAETNSE 679
>ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 29.6 bits (65), Expect = 4.2 Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 2/76 (2%) Frame = -3 Query: 451 AAWAKRCGERESV-AKSLYSPEKVYDFIGLLKKRYGIE*ARRRTAMHAQAGRPAGLPEGS 275 AAW + + E V LYSP + D +G G PA P GS Sbjct: 1077 AAWMHQIPDPEDVKVVVLYSPLQDEDLLG---------------------GLPASRPGGS 1115 Query: 274 YR*KLWSDL-GGLQCV 230 R LWSDL GGL + Sbjct: 1116 RREPLWSDLKGGLSAL 1131
>ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 29.6 bits (65), Expect = 4.2 Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 2/76 (2%) Frame = -3 Query: 451 AAWAKRCGERESV-AKSLYSPEKVYDFIGLLKKRYGIE*ARRRTAMHAQAGRPAGLPEGS 275 AAW + + E V LYSP + D +G G PA P GS Sbjct: 1077 AAWMHQIPDPEDVKVVVLYSPLQDEDLLG---------------------GLPASRPGGS 1115 Query: 274 YR*KLWSDL-GGLQCV 230 R LWSDL GGL + Sbjct: 1116 RREPLWSDLKGGLSAL 1131
>ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 29.6 bits (65), Expect = 4.2 Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 2/76 (2%) Frame = -3 Query: 451 AAWAKRCGERESV-AKSLYSPEKVYDFIGLLKKRYGIE*ARRRTAMHAQAGRPAGLPEGS 275 AAW + + E V LYSP + D +G G PA P GS Sbjct: 1077 AAWMHQIPDPEDVKVVVLYSPLQDEDLLG---------------------GLPASRPGGS 1115 Query: 274 YR*KLWSDL-GGLQCV 230 R LWSDL GGL + Sbjct: 1116 RREPLWSDLKGGLSAL 1131
>GPI16_SCHPO (O94380) GPI transamidase component PIG-T homolog precursor| Length = 545 Score = 29.3 bits (64), Expect = 5.5 Identities = 22/74 (29%), Positives = 29/74 (39%) Frame = +1 Query: 49 RNGIAGGNSVLPPPKTRVDT*HTHRAGEHNTHPHCLTQPYTTNHSHANNLFH**RKKYPN 228 RNG G + PP + H E HCL Y+T H ++LFH K P Sbjct: 247 RNGRRKGKTTFQPPSE-----YCH--DEDMDSLHCLMSGYSTEHHTVDDLFH----KVPK 295 Query: 229 ARTAGHPNRSIIFI 270 R S +F+ Sbjct: 296 ERCLLSSTFSDVFV 309
>DHPH_BACBA (Q59224) Phenylalanine dehydrogenase (EC 1.4.1.20) (PheDH)| Length = 380 Score = 29.3 bits (64), Expect = 5.5 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -2 Query: 119 CVCHVSTLVFGGGSTELPPAIPFLYPLRAMNKL 21 C+ V GGG + +P A+ LY ++A NK+ Sbjct: 142 CIVGVPEAYGGGGDSSIPTAMGVLYGIKATNKM 174
>CEFD_NOCLA (Q03046) Isopenicillin N epimerase (EC 5.1.1.17)| Length = 398 Score = 28.9 bits (63), Expect = 7.2 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = +3 Query: 291 PAGRPACACMAVRRRAYSMPYLFLSRPMKS*TFSGE*RLLATLSRSPHRLAHAA-ILGAT 467 P RP + VR R + P FLSR + ++ RL L P RLA A + GA Sbjct: 29 PLPRPVFDRVTVRARMAAGPMDFLSRQLPPLLWTARERLAGYLGARPERLAFATNVTGAV 88 Query: 468 S 470 + Sbjct: 89 N 89
>LOLA4_DROME (Q867Z4) Longitudinals lacking protein, isoforms F/I/K/T| Length = 970 Score = 28.9 bits (63), Expect = 7.2 Identities = 21/92 (22%), Positives = 35/92 (38%) Frame = +2 Query: 83 PHRRPGLTHDTHIEQESTTRTHTA*PNHILPTTHTRTIYSTNKERNIQTHALQATQIAP* 262 PH + H HI Q + H + T H + T+++ + Q H Q + P Sbjct: 588 PHTSSTIIHPHHIIQHVSQEPHHQEHHQQHQTIHIEEVPQTSQQHHQQQHHHQLQTVQPT 647 Query: 263 FLSVASFRQAGRPAGLRVHGGPPARLLDAVPL 358 V S A + + G +L D+ P+ Sbjct: 648 HTQVQSIITAHPGQTINLVGLRNVQLADSKPI 679
>AROB_BACLD (Q65I29) 3-dehydroquinate synthase (EC 4.2.3.4)| Length = 362 Score = 28.5 bits (62), Expect = 9.4 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = -3 Query: 457 KIAAWAKRCGERESVAKSLYSPEKVYDFIGLLKKRYGI 344 KIAAW K G ESV + + + +Y + K R GI Sbjct: 290 KIAAWLKNLGYPESVKREVSTEALIYRMMNDKKTRGGI 327 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,723,402 Number of Sequences: 219361 Number of extensions: 1511547 Number of successful extensions: 4199 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 4030 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4183 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
