>Y968_TREPA (O83934) Hypothetical protein TP0968 precursor|
          Length = 540

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = -1

Query: 360 SSHACLQLAPCCDNSAQ-CTNHTEFPWYPETG--NGKKRGQEAICGCFIAQR 214
           S H+C  +AP C   AQ C+    FP + E G    ++  + AI  C +  R
Sbjct: 17  SQHSCRFVAPTCAEGAQGCSEFGAFPVFEERGMCAARRMRRAAIAACCVFAR 68

>STAB2_MOUSE (Q8R4U0) Stabilin-2 precursor [Contains: Short form stabilin-2]|
          Length = 2559

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 17/65 (26%), Positives = 27/65 (41%)
 Frame = -1

Query: 363  GSSHACLQLAPCCDNSAQCTNHTEFPWYPETGNGKKRGQEAICGCFIAQRTHFFCFTVLS 184
            G    CL++ PC +N   C  H E     +TG       +A+C C           T+++
Sbjct: 1513 GDGIVCLEINPCLENHGGCDRHAE---CTQTG-----PNQAVCNCLPKYTGDGKVCTLIN 1564

Query: 183  CLITN 169
              +TN
Sbjct: 1565 VCLTN 1569

>URED_KLEPN (Q02944) Urease accessory protein ureD|
          Length = 270

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 19/55 (34%), Positives = 27/55 (49%)
 Frame = +1

Query: 301 ICALSRVVTAGC*LQACMAAAWIVSRLQLGRVHLIEEYDHGHGQRRLEVWLHHQP 465
           +CA SR++            AW +  L LGR  + E + HG    RLEVW+  +P
Sbjct: 132 LCAFSRLL------------AWDL--LCLGRPVIGETFSHGTLSNRLEVWVDDEP 172

>URED_KLEAE (Q09063) Urease accessory protein ureD|
          Length = 270

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = +1

Query: 301 ICALSRVVTAGC*LQACMAAAWIVSRLQLGRVHLIEEYDHGHGQRRLEVWLHHQP 465
           +CA SR++            AW +  L LGR  + E + HG    RLEVW+ ++P
Sbjct: 132 LCASSRLL------------AWDL--LCLGRPVIGETFSHGTLSNRLEVWVDNEP 172


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,709,606
Number of Sequences: 219361
Number of extensions: 1442423
Number of successful extensions: 3315
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3313
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)