ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart27f09 |
|---|---|
| Clone Library Name | barley_pub |
>DHAS_PROMA (P49420) Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA| dehydrogenase) (ASADH) Length = 343 Score = 70.1 bits (170), Expect = 3e-12 Identities = 35/49 (71%), Positives = 43/49 (87%) Frame = -2 Query: 481 VSDKDDVSVGRIRQDLSQDDNRGLELFVCGDQIRKGAALNAVQIAEMLL 335 V+ KDD++VGRIRQDLS + LEL++CGDQIRKGAALNA+QIAE+LL Sbjct: 294 VTGKDDIAVGRIRQDLSNP--KALELWLCGDQIRKGAALNAIQIAELLL 340
>DHAS_SYNY3 (Q55512) Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA| dehydrogenase) (ASADH) Length = 280 Score = 65.9 bits (159), Expect = 6e-11 Identities = 33/47 (70%), Positives = 42/47 (89%) Frame = -2 Query: 472 KDDVSVGRIRQDLSQDDNRGLELFVCGDQIRKGAALNAVQIAEMLLK 332 +DDV VGRIRQD+S + GL+L++CGDQIRKGAALNAVQIAE+L++ Sbjct: 232 QDDVLVGRIRQDISHPN--GLDLWLCGDQIRKGAALNAVQIAELLVE 276
>DHAS_CORML (P0C1D9) Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA| dehydrogenase) (ASADH) Length = 344 Score = 63.9 bits (154), Expect = 2e-10 Identities = 31/46 (67%), Positives = 37/46 (80%) Frame = -2 Query: 469 DDVSVGRIRQDLSQDDNRGLELFVCGDQIRKGAALNAVQIAEMLLK 332 D+ VGRIRQD + DDNRGL L V GD +RKGAALN +QIAE+L+K Sbjct: 299 DESLVGRIRQDSTVDDNRGLVLVVSGDNLRKGAALNTIQIAELLVK 344
>DHAS_CORGL (P0C1D8) Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA| dehydrogenase) (ASADH) Length = 344 Score = 63.9 bits (154), Expect = 2e-10 Identities = 31/46 (67%), Positives = 37/46 (80%) Frame = -2 Query: 469 DDVSVGRIRQDLSQDDNRGLELFVCGDQIRKGAALNAVQIAEMLLK 332 D+ VGRIRQD + DDNRGL L V GD +RKGAALN +QIAE+L+K Sbjct: 299 DESLVGRIRQDSTVDDNRGLVLVVSGDNLRKGAALNTIQIAELLVK 344
>DHAS_CORFL (P41400) Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA| dehydrogenase) (ASADH) Length = 344 Score = 63.9 bits (154), Expect = 2e-10 Identities = 31/46 (67%), Positives = 37/46 (80%) Frame = -2 Query: 469 DDVSVGRIRQDLSQDDNRGLELFVCGDQIRKGAALNAVQIAEMLLK 332 D+ VGRIRQD + DDNRGL L V GD +RKGAALN +QIAE+L+K Sbjct: 299 DESLVGRIRQDSTVDDNRGLVLVVSGDNLRKGAALNTIQIAELLVK 344
>DHAS_MYCSM (P41404) Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA| dehydrogenase) (ASADH) Length = 346 Score = 60.8 bits (146), Expect = 2e-09 Identities = 30/44 (68%), Positives = 33/44 (75%) Frame = -2 Query: 469 DDVSVGRIRQDLSQDDNRGLELFVCGDQIRKGAALNAVQIAEML 338 DD VGRIRQD D RGL LFV GD +RKGAALN +QIAE+L Sbjct: 299 DDCLVGRIRQDPGVPDGRGLALFVSGDNLRKGAALNTIQIAELL 342
>DHAS_MYCTU (P0A542) Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA| dehydrogenase) (ASADH) Length = 345 Score = 57.4 bits (137), Expect = 2e-08 Identities = 28/44 (63%), Positives = 33/44 (75%) Frame = -2 Query: 469 DDVSVGRIRQDLSQDDNRGLELFVCGDQIRKGAALNAVQIAEML 338 D+ VGRIR+D D RGL LFV GD +RKGAALN +QIAE+L Sbjct: 298 DESLVGRIRRDPGVPDGRGLALFVSGDNLRKGAALNTIQIAELL 341
>DHAS_MYCBO (P0A543) Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA| dehydrogenase) (ASADH) Length = 345 Score = 57.4 bits (137), Expect = 2e-08 Identities = 28/44 (63%), Positives = 33/44 (75%) Frame = -2 Query: 469 DDVSVGRIRQDLSQDDNRGLELFVCGDQIRKGAALNAVQIAEML 338 D+ VGRIR+D D RGL LFV GD +RKGAALN +QIAE+L Sbjct: 298 DESLVGRIRRDPGVPDGRGLALFVSGDNLRKGAALNTIQIAELL 341
>DHAS_LEGPN (O31219) Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA| dehydrogenase) (ASADH) Length = 347 Score = 52.8 bits (125), Expect = 5e-07 Identities = 29/44 (65%), Positives = 33/44 (75%) Frame = -2 Query: 469 DDVSVGRIRQDLSQDDNRGLELFVCGDQIRKGAALNAVQIAEML 338 DDV VGRIRQD+S GL L++ D IRKGAA NAVQIAE+L Sbjct: 294 DDVFVGRIRQDISHPC--GLNLWIVADNIRKGAATNAVQIAEIL 335
>DHAS_SHEVI (Q56734) Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA| dehydrogenase) (ASADH) Length = 338 Score = 52.0 bits (123), Expect = 8e-07 Identities = 26/46 (56%), Positives = 36/46 (78%) Frame = -2 Query: 469 DDVSVGRIRQDLSQDDNRGLELFVCGDQIRKGAALNAVQIAEMLLK 332 D V VGR+R+D+S + G+ L+V D IRKGAALN+VQIAE+L++ Sbjct: 292 DPVYVGRVRKDISH--SHGINLWVVSDNIRKGAALNSVQIAEVLIR 335
>DHAS_SHESP (Q56732) Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA| dehydrogenase) (ASADH) Length = 338 Score = 52.0 bits (123), Expect = 8e-07 Identities = 26/46 (56%), Positives = 36/46 (78%) Frame = -2 Query: 469 DDVSVGRIRQDLSQDDNRGLELFVCGDQIRKGAALNAVQIAEMLLK 332 D V VGR+R+D+S + G+ L+V D IRKGAALN+VQIAE+L++ Sbjct: 292 DPVYVGRVRKDISH--SHGINLWVVSDNIRKGAALNSVQIAEVLIR 335
>DHAS_VIBCH (P23247) Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA| dehydrogenase) (ASADH) Length = 337 Score = 52.0 bits (123), Expect = 8e-07 Identities = 26/47 (55%), Positives = 35/47 (74%) Frame = -2 Query: 472 KDDVSVGRIRQDLSQDDNRGLELFVCGDQIRKGAALNAVQIAEMLLK 332 KD V VGR+R D+S + G+ L+V D +RKGAA NAVQIAE+L++ Sbjct: 290 KDHVLVGRVRNDISH--HSGINLWVVADNVRKGAATNAVQIAELLVR 334
>DHAS_STRAK (Q53612) Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA| dehydrogenase) (ASADH) Length = 338 Score = 50.4 bits (119), Expect = 2e-06 Identities = 28/45 (62%), Positives = 33/45 (73%) Frame = -2 Query: 472 KDDVSVGRIRQDLSQDDNRGLELFVCGDQIRKGAALNAVQIAEML 338 KD VGRIR D + D+ GL LFV D +RKGAALNAVQIAE++ Sbjct: 290 KDPSYVGRIRSDETVDN--GLALFVSNDNLRKGAALNAVQIAELV 332
>DHAS_AQUAE (O67716) Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA| dehydrogenase) (ASADH) Length = 340 Score = 49.7 bits (117), Expect = 4e-06 Identities = 27/47 (57%), Positives = 35/47 (74%) Frame = -2 Query: 472 KDDVSVGRIRQDLSQDDNRGLELFVCGDQIRKGAALNAVQIAEMLLK 332 +D+V VGRIR+D + GL ++V D IRKGAA NAVQIAE+L+K Sbjct: 292 RDEVFVGRIRKDRVFEP--GLSMWVVADNIRKGAATNAVQIAELLVK 336
>DHAS_RICPR (Q9ZDL2) Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA| dehydrogenase) (ASADH) Length = 338 Score = 47.4 bits (111), Expect = 2e-05 Identities = 26/49 (53%), Positives = 35/49 (71%) Frame = -2 Query: 481 VSDKDDVSVGRIRQDLSQDDNRGLELFVCGDQIRKGAALNAVQIAEMLL 335 V +D V V RIR DLS+D+ + L++ D +RKGAALN+VQIAE L+ Sbjct: 288 VVGEDAVYVSRIRNDLSKDNT--INLWITCDNLRKGAALNSVQIAEALI 334
>DHAS_BACSU (Q04797) Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA| dehydrogenase) (ASADH) Length = 346 Score = 47.0 bits (110), Expect = 3e-05 Identities = 27/47 (57%), Positives = 32/47 (68%) Frame = -2 Query: 472 KDDVSVGRIRQDLSQDDNRGLELFVCGDQIRKGAALNAVQIAEMLLK 332 K+DV VGRIR+DL D G L+V D + KGAA N+VQIAE L K Sbjct: 298 KNDVFVGRIRKDL--DRANGFHLWVVSDNLLKGAAWNSVQIAESLKK 342
>USG_AZOVI (P96199) USG-1 protein homolog| Length = 336 Score = 45.8 bits (107), Expect = 6e-05 Identities = 23/47 (48%), Positives = 34/47 (72%) Frame = -2 Query: 472 KDDVSVGRIRQDLSQDDNRGLELFVCGDQIRKGAALNAVQIAEMLLK 332 +D VGR+R + DD L+L++ D +RKG+ALNAVQ+AE+L+K Sbjct: 289 QDVAYVGRVRTGV--DDACELDLWIASDNVRKGSALNAVQLAELLIK 333
>USG_PSEAE (O87014) USG-1 protein homolog| Length = 336 Score = 41.2 bits (95), Expect = 0.001 Identities = 21/47 (44%), Positives = 31/47 (65%) Frame = -2 Query: 472 KDDVSVGRIRQDLSQDDNRGLELFVCGDQIRKGAALNAVQIAEMLLK 332 +D+ VGR+R Q D + L++ D +RKGAALNAV + E+L+K Sbjct: 289 QDETYVGRVRA--GQADPCQVNLWIVSDNVRKGAALNAVLLGELLIK 333
>DHAS_CAMJE (Q59291) Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA| dehydrogenase) (ASADH) Length = 343 Score = 40.8 bits (94), Expect = 0.002 Identities = 24/49 (48%), Positives = 32/49 (65%) Frame = -2 Query: 478 SDKDDVSVGRIRQDLSQDDNRGLELFVCGDQIRKGAALNAVQIAEMLLK 332 SD ++ VGRIR D+ D + L L+ DQIR GAA NAV+IA+ L+ Sbjct: 293 SDTNETYVGRIRADVY--DKKILHLWCVADQIRVGAATNAVRIAQKWLE 339
>DHAS_STRMU (P10539) Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA| dehydrogenase) (ASADH) Length = 358 Score = 40.8 bits (94), Expect = 0.002 Identities = 22/40 (55%), Positives = 28/40 (70%) Frame = -2 Query: 457 VGRIRQDLSQDDNRGLELFVCGDQIRKGAALNAVQIAEML 338 VGRIR+DL D G+ ++V D + KGAA N+VQIAE L Sbjct: 304 VGRIRKDL--DIENGIHMWVVSDNLLKGAAWNSVQIAESL 341
>DHAS_HELPY (O25801) Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA| dehydrogenase) (ASADH) Length = 346 Score = 38.1 bits (87), Expect = 0.012 Identities = 22/49 (44%), Positives = 30/49 (61%) Frame = -2 Query: 478 SDKDDVSVGRIRQDLSQDDNRGLELFVCGDQIRKGAALNAVQIAEMLLK 332 S D V +GR+R+DL D + L F DQ+R GAA NA++IA +K Sbjct: 298 SHTDSVFIGRLRKDLF--DKKTLHGFCVADQLRVGAATNALKIALHYIK 344
>DHAS_HELPJ (Q9ZK28) Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA| dehydrogenase) (ASADH) Length = 346 Score = 38.1 bits (87), Expect = 0.012 Identities = 22/49 (44%), Positives = 30/49 (61%) Frame = -2 Query: 478 SDKDDVSVGRIRQDLSQDDNRGLELFVCGDQIRKGAALNAVQIAEMLLK 332 S D V +GR+R+DL D + L F DQ+R GAA NA++IA +K Sbjct: 298 SHTDSVFIGRLRKDLF--DKKTLHGFCVADQLRVGAATNALKIALHYIK 344
>DHAS_ARCFU (O28766) Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA| dehydrogenase) (ASADH) Length = 343 Score = 30.4 bits (67), Expect = 2.6 Identities = 17/44 (38%), Positives = 27/44 (61%) Frame = -2 Query: 463 VSVGRIRQDLSQDDNRGLELFVCGDQIRKGAALNAVQIAEMLLK 332 ++VGRIR+D RGL+ V G +GAA ++ AE+++K Sbjct: 300 ITVGRIRKD----GERGLKYIVLGHNTVRGAAGASILNAELMIK 339
>Y092_MYCBO (P65347) Putative methyltransferase Mb0092 (EC 2.1.1.-)| Length = 197 Score = 29.6 bits (65), Expect = 4.4 Identities = 12/44 (27%), Positives = 22/44 (50%) Frame = +3 Query: 270 YINPSMDRAMWHMRQW*KGGHFSSISAIWTAFSAAPLRIWSPQT 401 ++ PS+ +WH+ W G + + W +AP++ PQT Sbjct: 123 FVTPSLRNGLWHLTSWVACGMANRVKGKWE--HSAPIKWPPPQT 164
>Y089_MYCTU (P65346) Putative methyltransferase Rv0089/MT0098 (EC 2.1.1.-)| Length = 197 Score = 29.6 bits (65), Expect = 4.4 Identities = 12/44 (27%), Positives = 22/44 (50%) Frame = +3 Query: 270 YINPSMDRAMWHMRQW*KGGHFSSISAIWTAFSAAPLRIWSPQT 401 ++ PS+ +WH+ W G + + W +AP++ PQT Sbjct: 123 FVTPSLRNGLWHLTSWVACGMANRVKGKWE--HSAPIKWPPPQT 164
>OSTA_XYLFT (Q87AI9) Organic solvent tolerance protein precursor| Length = 792 Score = 29.3 bits (64), Expect = 5.7 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = -1 Query: 140 FCLRLVFLVSIASLSFVCGQWGRGETWS 57 F RLV + S++SL G +G GETW+ Sbjct: 331 FSSRLVGMSSLSSLQSTVGVYGTGETWT 358
>OSTA_XYLFA (Q9PF41) Organic solvent tolerance protein precursor| Length = 792 Score = 29.3 bits (64), Expect = 5.7 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = -1 Query: 140 FCLRLVFLVSIASLSFVCGQWGRGETWS 57 F RLV + S++SL G +G GETW+ Sbjct: 331 FSSRLVGMSSLSSLQSTVGVYGTGETWT 358
>HCF_DROME (Q9V4C8) Host cell factor (dHcf) [Contains: HCF N-terminal chain;| HCF C-terminal chain] Length = 1500 Score = 28.5 bits (62), Expect = 9.7 Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%) Frame = +3 Query: 336 SSISAIWTAFSAA-PLRIWSPQTNNSNPLLSSCDKS*RILPTDTSSLS 476 S+ +A+ A S + PL + P T ++N +LSS + RI+P+ T+S S Sbjct: 595 STTTAVSIATSTSDPLSVRVPSTMSANVVLSSSSSTLRIVPSVTASHS 642
>GALK2_RAT (Q5XIG6) N-acetylgalactosamine kinase (EC 2.7.1.157) (GalNAc| kinase) (Galactokinase 2) Length = 458 Score = 28.5 bits (62), Expect = 9.7 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = -2 Query: 106 QVCRSSVDNGVEVKPGLM*LYHRDNEASCADLYE 5 QVC ++ DN V++ LM HR SC D+YE Sbjct: 347 QVCEAAPDNAVQLLGELMNQSHR----SCRDMYE 376
>I10R1_MOUSE (Q61727) Interleukin-10 receptor alpha chain precursor (IL-10R-A)| (IL-10R1) (CDw210a antigen) Length = 575 Score = 28.5 bits (62), Expect = 9.7 Identities = 14/57 (24%), Positives = 25/57 (43%) Frame = -2 Query: 208 FSHLLHADVQPEVEKRSFFACLDFALGWSFWCQLQVCRSSVDNGVEVKPGLM*LYHR 38 F H+LH P + +++ G S W + +CR + ++ + LYHR Sbjct: 39 FQHILHWKPIPNQSESTYYEVALKQYGNSTWNDIHICRKAQALSCDLTTFTLDLYHR 95 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,701,859 Number of Sequences: 219361 Number of extensions: 1334791 Number of successful extensions: 3066 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 2984 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3055 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
